Citrus Sinensis ID: 025908

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISGA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEcccccccHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHcccccccccccccEEEcEEHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccccEEEcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcccEEEEEEccccccHHHccccccccHcccccccEEEEcccccHHHHHHHHHHccccEEEEHHHHHcccHHHHHHHHHcccEEEEEEcccHcccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHccccccEccccccEEEEEEHHHHHHHHHHHHHccccccEEEEEcccccEcHHHHHHHHHHHHcccccEEEEccc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcetdtvdpksrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNIsgekyvtfDGLARACAKVTGYCIagcwisga
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCEtdtvdpksrhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfnisgEKYVTFDGLARACAKVTGYCIAGCWISGA
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISGA
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET******************LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWI***
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWI***
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD***********LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISGA
Disordered Region (DISPRO)
*GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISGA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	246	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.959	0.624	0.868	1e-124
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.934	0.566	0.344	3e-33
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.902	0.674	0.251	1e-05
P33119	328	UDP-glucose 4-epimerase O	yes	no	0.878	0.658	0.246	0.0003
P55579	396	Uncharacterized protein y	yes	no	0.886	0.550	0.236	0.0004

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  142 bits (357), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 128/241 (53%), Gaps = 11/241 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
              V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGYC 237
           IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G  
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAGKT 322

Query: 238 I 238
           +
Sbjct: 323 V 323

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 56/278 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD    
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVN-- 53

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
           D V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 54  DVVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
           S+A  Y + D++P  E     P + +   KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 156 GPLNYNPVEEWFF----------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
           G +  N   E             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTGYCI 238
           L  NE    ++FN+ SG+ Y +   +   C +VTG+ I
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTGHPI 269

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 112/284 (39%), Gaps = 68/284 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLF------TRGKAPIAQQLPGESDQEFAEFSSKILHLK 55
           GG  ++G   S +L+++GH+VT+        R   P+                     ++
Sbjct: 7   GGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGATF-----------------VE 49

Query: 56  GDRKDYDFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDALP--NL 97
           GD K  D   + LS+  FD V     R    + VE               +LDA+   N+
Sbjct: 50  GDIK--DVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNV 107

Query: 98  EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLES----KGVNWTSLRPV 152
              ++ S+A  Y + + +P  E     P + +   KL+ +  + S     G   TSLR  
Sbjct: 108 RNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167

Query: 153 YI---YGPLNYNPVEEWFF----------HRLKA---GRPIPIPGSGIQVTQLGHVKDLA 196
            +   YG +  N   E             HR K    G   P    G  +    H++DLA
Sbjct: 168 NVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTE-DGTPIRDYIHIRDLA 226

Query: 197 RAFVQVL-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTGYCI 238
            A +  L  N + S ++FN+ SGE Y +   +   C +VTG+ I
Sbjct: 227 DAHILALQSNVEGSHRIFNLGSGEGY-SVKQVIDTCREVTGHLI 269

Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) (taxid: 257309)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 27/245 (11%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-------L 54
           GG+ + G  LS+ L+++G  V +F           PG S          IL        L
Sbjct: 56  GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNLEFLKGTILDRNAVRQAL 108

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKS 112
            G  K +  V     AK  D+ + +N       + I+D      +E+F+Y SS+ V+   
Sbjct: 109 SGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSSSAVFGAP 165

Query: 113 DLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
              P  E    +P     +++  G++  +  ++  G++   +RP  + G      V +  
Sbjct: 166 KSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGRQGVVQIL 224

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227
           F  ++ G  IP+ G G    Q  H  DLA A +    N K     +NI   ++ T   L 
Sbjct: 225 FDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA-SNVKGF-ATYNIGAAEFGTMRELL 282

Query: 228 RACAK 232
           +   K
Sbjct: 283 QVVIK 287

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
363806740	378	uncharacterized protein LOC100791076 [Gl	0.959	0.624	0.889	1e-125
255542956	381	NAD dependent epimerase/dehydratase, put	0.959	0.619	0.902	1e-125
356572914	378	PREDICTED: uncharacterized protein At1g0	0.959	0.624	0.889	1e-124
388497252	378	unknown [Medicago truncatula]	0.959	0.624	0.894	1e-123
312282041	379	unnamed protein product [Thellungiella h	0.959	0.622	0.877	1e-123
388512335	378	unknown [Medicago truncatula]	0.959	0.624	0.889	1e-123
118489564	380	unknown [Populus trichocarpa x Populus d	0.959	0.621	0.885	1e-123
15217485	378	RNA binding protein [Arabidopsis thalian	0.959	0.624	0.868	1e-122
224124986	380	predicted protein [Populus trichocarpa]	0.959	0.621	0.885	1e-122
118487652	380	unknown [Populus trichocarpa]	0.959	0.621	0.885	1e-122

>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 228/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAK  G+
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGGF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/236 (90%), Positives = 226/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAK  G+
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGF 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAK  G+
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/236 (89%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAK  G+
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGF 294

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/236 (87%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGF 294

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 224/236 (94%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC K  G+
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGGF 294

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 226/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.959	0.624	0.868	1.5e-113
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.922	0.559	0.348	6.7e-33
TIGR_CMR|GSU_0385	294	GSU_0385 "NADH dehydrogenase s	0.422	0.353	0.268	1.1e-05
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.540	0.429	0.287	5.2e-05
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.390	0.328	0.318	0.00018
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.390	0.328	0.318	0.00018
UNIPROTKB|Q83DM2	301	CBU_0681 "NAD dependent epimer	0.556	0.455	0.287	0.00024
TIGR_CMR|CBU_0681	301	CBU_0681 "conserved hypothetic	0.556	0.455	0.287	0.00024
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.382	0.323	0.330	0.0003
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.715	0.553	0.266	0.00035

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
             D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 83/238 (34%), Positives = 127/238 (53%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct:   206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query:   179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTG 235
             IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G
Sbjct:   263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG 320

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 29/108 (26%), Positives = 47/108 (43%)

Query:   129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
             H+ K   E V+    ++WT  RP  I+GP   +  +   F  R  A   +P+ G G    
Sbjct:   122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178

Query:   188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
             Q   V D+AR F   L   +   Q + + G   +T++ +     +V G
Sbjct:   179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 44/153 (28%), Positives = 75/153 (49%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV +     
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119

Query:   116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
                 T  V+P KS   GK+     +E++G+ +T
Sbjct:   120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 44/153 (28%), Positives = 69/153 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIA 239
             + SR V NI+  + ++F  LA    +++   +A
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 44/153 (28%), Positives = 69/153 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIA 239
             + SR V NI+  + ++F  LA    +++   +A
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
 Identities = 36/109 (33%), Positives = 55/109 (50%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
             GGTRF G  L   LV EGH+VT+ TRGK          ++  F +   +++ L  + +D 
Sbjct:     7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55

Query:    62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY 109
              F    L+ + +DV+YD       E    +DA    ++++IY SS  VY
Sbjct:    56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVY 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
 Identities = 52/195 (26%), Positives = 85/195 (43%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT  IG  +    VK GH      R +A ++    G++ Q F +F   +LH  GD  D
Sbjct:    11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
             ++ +  ++  K  DVV    G        ILD    +       +   +L S+  +   +
Sbjct:    68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120

Query:   120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             +  V+P KS    KL T   +E++G+ +T L   Y  G   Y P       +L+ G   P
Sbjct:   121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174

Query:   179 IPGSGIQVTQLGHVK 193
              P   +++   G+VK
Sbjct:   175 -PRDKVKIFGDGNVK 188


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      246       246    0.0010  113 3  11 22  0.44    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  194 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.38u 0.09s 21.47t   Elapsed:  00:00:01
  Total cpu time:  21.38u 0.09s 21.47t   Elapsed:  00:00:01
  Start:  Sat May 11 08:17:24 2013   End:  Sat May 11 08:17:25 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8686	0.9593	0.6243	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	246
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-143
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	4e-92
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-23
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-22
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-19
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-17
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	9e-16
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-14
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-11
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-10
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	5e-10
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	8e-10
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-09
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	7e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	8e-09
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-08
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	7e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	4e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	9e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	5e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	7e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	7e-05
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-04
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	2e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.002
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	0.002
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.002
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.003
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.003
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.003
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	0.003
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.004
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  404 bits (1040), Expect = e-143
 Identities = 135/237 (56%), Positives = 165/237 (69%), Gaps = 10/237 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V PK+   G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           IPGSGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAK  G
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAG 292

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  271 bits (694), Expect = 4e-92
 Identities = 99/245 (40%), Positives = 127/245 (51%), Gaps = 23/245 (9%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            P  E D V   DP    +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 231 AKVTG 235
           AK  G
Sbjct: 233 AKALG 237

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 95.0 bits (236), Expect = 5e-23
 Identities = 62/268 (23%), Positives = 88/268 (32%), Gaps = 47/268 (17%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G                  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
           + SS  V          + D   P+        KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 210 RQVFNI-SGEKYVTFDGLARACAKVTGY 236
             VFNI SG   +T   LA A A+  G 
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGS 258

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 89.7 bits (223), Expect = 5e-22
 Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
                P S     KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 83.5 bits (207), Expect = 2e-19
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
           SS+ VY      P  E   + P S     K   +   E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 215 I 215
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
           S G VY   + LP  E+D   P S +   KL  E  L       G+++T LR    YGP 
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
                     P+     +++  G PI I G G  +    ++ DL  A + +L ++     
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228

Query: 212 VFNI-SGEKY 220
           VFNI SG  Y
Sbjct: 229 VFNIGSGIGY 238

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 73.9 bits (182), Expect = 9e-16
 Identities = 61/218 (27%), Positives = 83/218 (38%), Gaps = 27/218 (12%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
            SL            G     +  +LDAL   P +++ IY SS GVY   D      +  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116

Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           +    S   G+  L  E  L + G    T LR   IYGP   +P+      RL  G    
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            P +G   T   HV DL  A    L        V+N+ 
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVV 205

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 56/253 (22%), Positives = 96/253 (37%), Gaps = 47/253 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
           G             D   P    + K   E  +       T +RP  ++G  +       
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 223 FDGLARACAKVTG 235
              L     ++ G
Sbjct: 219 LAELVELLRRLGG 231

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y  +    
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
              +     P +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 64/265 (24%), Positives = 102/265 (38%), Gaps = 44/265 (16%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
           + V             LP+   D+ D  +  K  +    VLE+ G +     +LRP  I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172

Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
           GP     +    F   + G    + G G  +    +V +LA A +      +  +  S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231

Query: 212 VFNISGEKYVTFDGLARACAKVTGY 236
            + I+  +      L R   K  G+
Sbjct: 232 TYFITDAEPHNMFELLRPVWKALGF 256

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 52/245 (21%), Positives = 88/245 (35%), Gaps = 48/245 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
           D  ++   A +G D +             + +  +DA            AGV    YL  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100

Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
                 + D+    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151

Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
            G      G G     +  V  +D+A A    L       +V+N++G + +++  LA   
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207

Query: 231 AKVTG 235
           ++  G
Sbjct: 208 SEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 57.6 bits (140), Expect = 8e-10
 Identities = 67/274 (24%), Positives = 101/274 (36%), Gaps = 55/274 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
            +++F+Y SS+ VY     LP  E    +P S +   K   E          G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCIA 239
             A  +V+NI   K  + + LA    ++ G  + 
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILGKELE 260

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 50/240 (20%), Positives = 77/240 (32%), Gaps = 33/240 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G        
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
                D   P +  + K   E+ L S G+ +T+LR    Y          +      AG 
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P+   G G        V D+A A    L     + + + ++G + +T   LA       G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219

Length = 275

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 11/112 (9%)

Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC 237
             +  +  DLARA V +L N      + N+     ++   LA A A+V G+ 
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVGFK 254

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
           S++ VY  +  +P  E   +        P S  K   +    S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 202 VLGNEKASRQVFNISGEKYVTF 223
           +L   +A  ++ N    + ++ 
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
              DL    E     P    K K  TE+VL    + +T +RP  IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 38/227 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVYLKSDL 114
              D V S+  + G            D      ++DA     +++F+  SS G    S  
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           L                K   E  L + G+++T +RP    G L  +P           G
Sbjct: 119 LEA-------LGPYLDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVLGGDG 167

Query: 175 RPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
             +  PI  +           D+A    + L    A  + F + G  
Sbjct: 168 TRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 56/265 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
                        +  P  E    +   R K  L    VLE  ++G++   + P  ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170

Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            +  P              +P  P  G        V+D+A   +  +  EK  R      
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR------ 219

Query: 217 GEKY------VTFDGLARACAKVTG 235
           GE+Y      ++F  L    A++TG
Sbjct: 220 GERYILGGENLSFKQLFETLAEITG 244

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 59/261 (22%), Positives = 87/261 (33%), Gaps = 57/261 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE               
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
           D    +    G D V  +  R     +   D L      N E               +F+
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 102 YCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
           + SS  V  +  +  P  ETD   P+  + + KL  E  L     S G+    LRP  +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166

Query: 156 GP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           GP    N+  +       +  G P+P PG+      L  + +L  A    +   KA+   
Sbjct: 167 GPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221

Query: 213 FNISGEKYVT----FDGLARA 229
           F +S    V+     D + RA
Sbjct: 222 FLVSDGPPVSTAELVDEIRRA 242

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 51/251 (20%), Positives = 86/251 (34%), Gaps = 39/251 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
             +      E    DP +   R   +      L  +GV  + +R P     P+ +   + 
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168

Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
            F        +        G G       H  D AR +   L   KA   V++   E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227

Query: 222 TFDGLARACAK 232
               +A A  +
Sbjct: 228 PVKDIAEAIGR 238

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 40/235 (17%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH      
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119

Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
                   K   E  + + G+  T LRP +       N +      +++ G   + +P  
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170

Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGY 236
                 +  V D+  A   +  +  K + +   ++G++  T + +A A +KV G 
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLGK 224

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
           G       +       + P +  +   +      VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 214 NI 215
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 39/254 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V +  +A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIA--AARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
               P  E     P +R KG++     E +L +     +    +R    YGP   N    
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165

Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           W    L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225

Query: 223 FDGLARACAKVTGY 236
              L    A+  G 
Sbjct: 226 TRELIAIAARAAGR 239

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 17/144 (11%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
           + + +  SS  VY     +  P  E   +           K   E +L         +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA   VL   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214

Query: 207 KASRQVFNISGEKYVTFDGLARAC 230
             +  +FN++G+  V    +    
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALL 238

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.3 bits (103), Expect = 5e-05
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
           ARA   VL  +    +++NI G 
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 34/242 (14%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T  +G  +   L+   G  VT+ TR  +         S  EF     K+  +  D   
Sbjct: 6   GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
           ++ + ++L  KG D V    G  A   +  ++DA           +AGV  ++ S+  + 
Sbjct: 56  HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104

Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           +     +        K +    L +K  G+ WT    V     L+Y  +E  F     A 
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKV 233
           R   I G G        ++D+ RA  + L + ++   +V  ++G+  VT + L     +V
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219

Query: 234 TG 235
           TG
Sbjct: 220 TG 221

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 36/240 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
           +A  Y LK    P   +     P S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 220
                F+ RLKAG+   +  +         VKDLAR   + L +       ++  SGE  
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 56/274 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
            SSA VY     L++ ++   E D   P          KL TE +     E  G+    +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172

Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
           R   IYGP   ++   E     +       K G    I G G+Q     ++ D      +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232

Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           ++  E    +  N+  ++ V+ + LA      +G
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSG 264

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 11/104 (10%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            DLA A V ++     +  V N+     VT   LA    +V G+
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVGF 251

Length = 306

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 56/273 (20%), Positives = 97/273 (35%), Gaps = 49/273 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
            F Y S+A V   +   +   E +          +S+ + +    +   +  +  T  RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175

Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
             + G              E    + L K GR +P+PG+      L  V  +A A V + 
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              +A+ Q+F+++     T   +A         
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLS 266

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
             VL  EK    + +NI G    T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           P+ E D   P +   + KL  E  + +       LR  ++YG    N V+          
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168

Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
             + +      V  QLG     +DLA A + ++       A    ++++G    ++   A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222

Query: 228 RACAKVTG 235
           RA     G
Sbjct: 223 RAIFDEAG 230

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 41/262 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
           ++ SS+ VY ++ ++P  E     P S +   KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 214 NISGEKYVTFDGLARACAKVTG 235
           N+  +  ++ + +A    +  G
Sbjct: 233 NLGNDDTISVNEIAEIVIEELG 254

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 63/280 (22%), Positives = 91/280 (32%), Gaps = 93/280 (33%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
           EQ    FI  S+ G Y  S+   + E D+                 ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
           DL +  +  L N   S    N +  + V     A+A A+ 
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARA 239

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 17/129 (13%)

Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
           P+ E D  +P + + K KL  E  + +    +  LR  ++YG L    N V EW      
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFV-EWMLRLAA 173

Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
             + +       GS        +  DLA A ++++  E+ S   ++++S    ++    A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225

Query: 228 RACAKVTGY 236
           +  A   G 
Sbjct: 226 KLIADALGL 234

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 2  GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
          GGT R +   L+  LV  GH+VTLF    ++  AP+   +P     +             
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75

Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
                  + +L+A  FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 55/253 (21%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            G T  IG  ++  L++ G  V    R     A           A   ++++   GD  D
Sbjct: 4   TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52

Query: 61  YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
              + ++L   G D V+         D         E    AL    +++ +  SS G  
Sbjct: 53  PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH 169
            +S       +  +      +G    E VL   G+    LRP +         +E     
Sbjct: 111 PES------PSGLI------RGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQ 150

Query: 170 R---LKAGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVT 222
                KAG   +P PG G    +L  +   D+AR   ++L + E    +V+ ++G + +T
Sbjct: 151 APSIRKAGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 223 FDGLARACAKVTG 235
            + +A A ++V G
Sbjct: 207 MNEIAAALSRVLG 219

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 59/269 (21%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           FIG  L   LV++G++V  F       +    G  D    E   KI  + GD +D D V+
Sbjct: 9   FIGSHLVEALVRQGYEVRAFVLYN---SFNSWGWLDTSPPEVKDKIEVVTGDIRDPDSVR 65

Query: 66  SSLSAKGFDVVY---------------------DINGREADEVEPILDALPNLEQFIYCS 104
            ++  KG DVV+                     ++ G   + ++   D    +E+ ++ S
Sbjct: 66  KAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDL--GVEKVVHTS 120

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRHKG-KLNT----ESVLESKGVNWTSLRPVYIYGPLN 159
           ++ VY  +  +P  E   +  +S +   K+       S   S     T +RP   YGP  
Sbjct: 121 TSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFNTYGP-- 178

Query: 160 YNPVEEWFFHRLKAGRPIP-IPG---SGIQVTQLG---------HVKDLARAFVQVLGNE 206
                     R  A   IP I     SG +  +LG         +V D  R F+ +  ++
Sbjct: 179 ----------RQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228

Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTG 235
           K   +V NI     ++     +  A++ G
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEIMG 257

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	246
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.98
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.98
PLN02240	352	UDP-glucose 4-epimerase	99.98
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.98
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.98
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.98
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.92
PRK12320	699	hypothetical protein; Provisional	99.91
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.9
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.89
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.87
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.85
COG2910	211	Putative NADH-flavin reductase [General function p	99.82
PRK06482	276	short chain dehydrogenase; Provisional	99.81
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.79
PRK09135	249	pteridine reductase; Provisional	99.78
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.77
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.77
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.76
PRK07806	248	short chain dehydrogenase; Provisional	99.75
PRK08263	275	short chain dehydrogenase; Provisional	99.75
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.75
PRK05875	276	short chain dehydrogenase; Provisional	99.75
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK07074	257	short chain dehydrogenase; Provisional	99.72
PRK07774	250	short chain dehydrogenase; Provisional	99.72
PRK12828	239	short chain dehydrogenase; Provisional	99.72
PRK07067	257	sorbitol dehydrogenase; Provisional	99.72
PRK06914	280	short chain dehydrogenase; Provisional	99.71
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06138	252	short chain dehydrogenase; Provisional	99.69
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.69
PRK09186	256	flagellin modification protein A; Provisional	99.69
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.69
PRK06180	277	short chain dehydrogenase; Provisional	99.68
PRK07775	274	short chain dehydrogenase; Provisional	99.68
PRK12746	254	short chain dehydrogenase; Provisional	99.68
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.68
PRK12827	249	short chain dehydrogenase; Provisional	99.68
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.67
PRK12829	264	short chain dehydrogenase; Provisional	99.67
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.67
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.67
PRK06182	273	short chain dehydrogenase; Validated	99.67
PRK06128	300	oxidoreductase; Provisional	99.67
PRK08219	227	short chain dehydrogenase; Provisional	99.66
PRK07041	230	short chain dehydrogenase; Provisional	99.65
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.65
PRK06123	248	short chain dehydrogenase; Provisional	99.65
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK07060	245	short chain dehydrogenase; Provisional	99.64
PRK06701	290	short chain dehydrogenase; Provisional	99.64
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.64
PRK10538	248	malonic semialdehyde reductase; Provisional	99.64
PRK07577	234	short chain dehydrogenase; Provisional	99.64
PRK07890	258	short chain dehydrogenase; Provisional	99.63
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.63
PRK05993	277	short chain dehydrogenase; Provisional	99.63
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.63
PRK12939	250	short chain dehydrogenase; Provisional	99.63
PRK12937	245	short chain dehydrogenase; Provisional	99.63
PRK08628	258	short chain dehydrogenase; Provisional	99.63
PRK08324	681	short chain dehydrogenase; Validated	99.62
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.61
PRK05876	275	short chain dehydrogenase; Provisional	99.61
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.61
PRK09134	258	short chain dehydrogenase; Provisional	99.61
PRK07825	273	short chain dehydrogenase; Provisional	99.61
PRK06181	263	short chain dehydrogenase; Provisional	99.61
PRK06523	260	short chain dehydrogenase; Provisional	99.61
PRK06196	315	oxidoreductase; Provisional	99.6
PRK06398	258	aldose dehydrogenase; Validated	99.6
PRK06841	255	short chain dehydrogenase; Provisional	99.6
PRK06194	287	hypothetical protein; Provisional	99.6
PRK06114	254	short chain dehydrogenase; Provisional	99.6
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.6
PRK05717	255	oxidoreductase; Validated	99.6
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.6
PRK06500	249	short chain dehydrogenase; Provisional	99.59
PRK09291	257	short chain dehydrogenase; Provisional	99.59
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK08017	256	oxidoreductase; Provisional	99.58
PRK07326	237	short chain dehydrogenase; Provisional	99.58
PRK07985	294	oxidoreductase; Provisional	99.57
PRK06179	270	short chain dehydrogenase; Provisional	99.57
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.57
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PLN02253	280	xanthoxin dehydrogenase	99.57
PRK12742	237	oxidoreductase; Provisional	99.57
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK12743	256	oxidoreductase; Provisional	99.56
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.56
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.56
PRK12744	257	short chain dehydrogenase; Provisional	99.56
PRK07069	251	short chain dehydrogenase; Validated	99.56
PRK06949	258	short chain dehydrogenase; Provisional	99.55
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.55
PRK08265	261	short chain dehydrogenase; Provisional	99.55
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.55
PRK06483	236	dihydromonapterin reductase; Provisional	99.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.55
PRK07856	252	short chain dehydrogenase; Provisional	99.54
PRK07063	260	short chain dehydrogenase; Provisional	99.54
PRK08643	256	acetoin reductase; Validated	99.54
PRK05650	270	short chain dehydrogenase; Provisional	99.54
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.54
PRK07478	254	short chain dehydrogenase; Provisional	99.53
PRK07454	241	short chain dehydrogenase; Provisional	99.53
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK08339	263	short chain dehydrogenase; Provisional	99.53
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.53
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.53
PRK07024	257	short chain dehydrogenase; Provisional	99.53
PRK08264	238	short chain dehydrogenase; Validated	99.52
PRK08226	263	short chain dehydrogenase; Provisional	99.52
PRK06101	240	short chain dehydrogenase; Provisional	99.52
PRK07814	263	short chain dehydrogenase; Provisional	99.51
PRK09242	257	tropinone reductase; Provisional	99.51
PRK12747	252	short chain dehydrogenase; Provisional	99.51
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.51
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK07109	334	short chain dehydrogenase; Provisional	99.5
PRK05693	274	short chain dehydrogenase; Provisional	99.5
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.5
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.5
PRK06057	255	short chain dehydrogenase; Provisional	99.5
PRK06172	253	short chain dehydrogenase; Provisional	99.5
PRK07035	252	short chain dehydrogenase; Provisional	99.5
PRK07831	262	short chain dehydrogenase; Provisional	99.49
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.49
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.49
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.48
PRK05867	253	short chain dehydrogenase; Provisional	99.48
PRK08589	272	short chain dehydrogenase; Validated	99.47
KOG2774	366	consensus NAD dependent epimerase [General functio	99.47
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.47
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.47
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.47
PRK06197	306	short chain dehydrogenase; Provisional	99.47
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK07102	243	short chain dehydrogenase; Provisional	99.47
PRK07677	252	short chain dehydrogenase; Provisional	99.46
PRK06198	260	short chain dehydrogenase; Provisional	99.46
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.46
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.46
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.45
PRK07904	253	short chain dehydrogenase; Provisional	99.45
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.45
PRK06484	520	short chain dehydrogenase; Validated	99.45
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.45
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.45
PRK06924	251	short chain dehydrogenase; Provisional	99.44
PRK08267	260	short chain dehydrogenase; Provisional	99.44
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.44
PRK07576	264	short chain dehydrogenase; Provisional	99.44
PRK08251	248	short chain dehydrogenase; Provisional	99.44
PRK07023	243	short chain dehydrogenase; Provisional	99.44
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.44
PRK08278	273	short chain dehydrogenase; Provisional	99.44
PRK05866	293	short chain dehydrogenase; Provisional	99.43
PRK07062	265	short chain dehydrogenase; Provisional	99.43
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.43
PRK06139	330	short chain dehydrogenase; Provisional	99.41
PRK05872	296	short chain dehydrogenase; Provisional	99.4
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.4
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.39
PRK05854	313	short chain dehydrogenase; Provisional	99.39
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.37
PRK09072	263	short chain dehydrogenase; Provisional	99.37
PRK06125	259	short chain dehydrogenase; Provisional	99.37
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.36
PRK07578	199	short chain dehydrogenase; Provisional	99.36
PRK07201	657	short chain dehydrogenase; Provisional	99.35
PRK08177	225	short chain dehydrogenase; Provisional	99.35
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.34
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PRK08703	239	short chain dehydrogenase; Provisional	99.34
PRK06940	275	short chain dehydrogenase; Provisional	99.33
PRK06953	222	short chain dehydrogenase; Provisional	99.33
PRK05884	223	short chain dehydrogenase; Provisional	99.32
PRK07832	272	short chain dehydrogenase; Provisional	99.32
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.3
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.28
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.28
PRK05855	582	short chain dehydrogenase; Validated	99.28
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.24
PRK07791	286	short chain dehydrogenase; Provisional	99.24
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.23
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.23
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.22
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.2
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.19
PRK06484	520	short chain dehydrogenase; Validated	99.19
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
PRK12367	245	short chain dehydrogenase; Provisional	99.15
PRK05599	246	hypothetical protein; Provisional	99.11
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.11
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.11
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.09
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.07
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.07
PRK08303	305	short chain dehydrogenase; Provisional	99.01
PLN02780	320	ketoreductase/ oxidoreductase	99.0
PLN00015	308	protochlorophyllide reductase	99.0
KOG0725	270	consensus Reductases with broad range of substrate	98.95
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.89
PRK08862	227	short chain dehydrogenase; Provisional	98.89
KOG1208	314	consensus Dehydrogenases with different specificit	98.87
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.83
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.81
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.8
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.72
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.69
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.68
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.66
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.62
PRK08309	177	short chain dehydrogenase; Provisional	98.57
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.53
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.5
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.5
PRK09620	229	hypothetical protein; Provisional	98.45
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.44
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.42
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.37
COG1028	251	FabG Dehydrogenases with different specificities (	98.33
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.29
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.27
PRK06720	169	hypothetical protein; Provisional	98.2
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.19
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.17
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.09
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.76
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.73
PTZ00325	321	malate dehydrogenase; Provisional	97.71
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.68
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.67
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.61
COG3268	382	Uncharacterized conserved protein [Function unknow	97.6
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.58
PLN00106	323	malate dehydrogenase	97.49
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.44
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.36
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.34
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.93
PRK14982	340	acyl-ACP reductase; Provisional	96.77
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.67
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.64
PRK09496	453	trkA potassium transporter peripheral membrane com	96.62
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.61
PRK05086	312	malate dehydrogenase; Provisional	96.54
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.54
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.53
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.45
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.36
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.31
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.23
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.19
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.16
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.15
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.88
PRK09496	453	trkA potassium transporter peripheral membrane com	95.84
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.78
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.78
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.7
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.69
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.68
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.68
PRK10669	558	putative cation:proton antiport protein; Provision	95.62
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.58
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.58
PLN02383	344	aspartate semialdehyde dehydrogenase	95.51
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.43
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.25
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.18
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.14
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.03
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	94.99
PRK04148	134	hypothetical protein; Provisional	94.98
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	94.91
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	94.87
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.86
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.81
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.81
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.79
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	94.72
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.7
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.69
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.54
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.5
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.47
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.43
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	94.36
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	94.3
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.25
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.17
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.13
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.12
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.11
PRK06436	303	glycerate dehydrogenase; Provisional	94.06
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.05
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.04
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.95
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	93.94
PLN02494	477	adenosylhomocysteinase	93.92
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.91
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	93.9
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.86
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.85
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.8
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	93.72
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	93.71
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.68
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.66
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	93.61
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	93.57
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.54
PRK13243	333	glyoxylate reductase; Reviewed	93.51
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.45
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	93.29
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	93.25
PRK10537	393	voltage-gated potassium channel; Provisional	93.21
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	93.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.18
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.17
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.15
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	93.12
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	93.07
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.06
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.02
PRK03562	621	glutathione-regulated potassium-efflux system prot	92.99
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	92.96
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	92.92
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.88
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.87
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.82
PLN02928	347	oxidoreductase family protein	92.82
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.74
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	92.72
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	92.71
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	92.7
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.58
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	92.54
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	92.52
PRK06487	317	glycerate dehydrogenase; Provisional	92.49
KOG0409	327	consensus Predicted dehydrogenase [General functio	92.48
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	92.4
PRK12480	330	D-lactate dehydrogenase; Provisional	92.39
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	92.35
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	92.27
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.22
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	92.12
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.12
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	92.11
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.07
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	92.04
PLN02586	360	probable cinnamyl alcohol dehydrogenase	91.97
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	91.97
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	91.94
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	91.93
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	91.89
PRK07574	385	formate dehydrogenase; Provisional	91.88
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	91.7
PRK08328	231	hypothetical protein; Provisional	91.68
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	91.45
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	91.38
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	91.37
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	91.37
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.23
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	91.21
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.19
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	91.18
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	91.16
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	91.11
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	91.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	90.96
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	90.96
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	90.93
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	90.93
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	90.92
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	90.9
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.86
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	90.79
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	90.78
PRK08462	445	biotin carboxylase; Validated	90.76
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	90.73
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	90.7
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.66
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	90.63
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	90.53
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	90.46
PRK08223	287	hypothetical protein; Validated	90.41
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	90.29
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	90.18
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	90.17
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	90.14
PRK08818	370	prephenate dehydrogenase; Provisional	89.95
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	89.95
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	89.93
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	89.91
PRK15116	268	sulfur acceptor protein CsdL; Provisional	89.73
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	89.65
KOG4288	283	consensus Predicted oxidoreductase [General functi	89.55
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	89.53
PRK05442	326	malate dehydrogenase; Provisional	89.52
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	89.51
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	89.51
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.49
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	89.47
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	89.44
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	89.4
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.38
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	89.36
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	89.32
PRK06849	389	hypothetical protein; Provisional	89.24
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	89.21
PLN02688	266	pyrroline-5-carboxylate reductase	89.11
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	89.04
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	89.01
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	88.94
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	88.89
PLN03139	386	formate dehydrogenase; Provisional	88.72
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	88.66
PRK08655	437	prephenate dehydrogenase; Provisional	88.65
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	88.63
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	88.56
PRK06545	359	prephenate dehydrogenase; Validated	88.52
PRK06988	312	putative formyltransferase; Provisional	88.45
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	88.44
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	88.42

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.1e-37  Score=228.01  Aligned_cols=234  Identities=24%  Similarity=0.296  Sum_probs=193.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||.||||++.+.+|++.|++|.++++-.......+.+          ..++++.+|+.|.+.+.+.|++.++|+|||+|
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            79999999999999999999999999877765444432          12689999999999999999999999999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +.                |+.++.+|+++|+  ++++|||.||..+||.....|++|+.+..|.+.| ++|+..|++++ 
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            86                4557899999988  9999999999999999999999999999999888 99999999985 


Q ss_pred             ---hcCCceEEeecceeeCCCC-------C---CchHHHHHHHHHhCC-CcccC------CCCCceeeeeeHHHHHHHHH
Q 025908          141 ---SKGVNWTSLRPVYIYGPLN-------Y---NPVEEWFFHRLKAGR-PIPIP------GSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~~-------~---~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~i~~~D~a~~~~  200 (246)
                         ..+++++++|..++.|...       .   +..++..+..+.... .+.++      .|+...+++||+.|+|++.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               3689999999999998431       1   223444443333222 23333      36677899999999999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          201 QVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      .+++.  ......+||++.|...|..|+++.+.++.|.+++.+..|
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~  281 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAP  281 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCC
Confidence            98853  111236999999999999999999999999998887655

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=5.3e-37  Score=245.11  Aligned_cols=234  Identities=19%  Similarity=0.195  Sum_probs=185.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|++|++.|+++|++|++++|........+.............++.++.+|+.|.+.+..+++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998654322111110000000001468899999999999999998  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..                ..++.+++++|+  ++++|||+||..+||.....+..|+.+..|.+.| .+|..+|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            752                235778999987  7899999999999997666667777777777777 99999999764 


Q ss_pred             ---hcCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC--CCC
Q 025908          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~  210 (246)
                         +.+++++++||+++|||++..     .+++.++..+..++++.+++++.+.++++|++|+|++++.++..+.  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               458999999999999997432     3566777777778888888889999999999999999998775432  246


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      ++||+++++.+|++|+++.+.+.++.
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            89999999999999999999998873

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.4e-36  Score=231.95  Aligned_cols=233  Identities=23%  Similarity=0.329  Sum_probs=183.1

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||+||+|++|+++|+++|  ++|+++++.+.... .....         ....+++.+|++|.+++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---------~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---------SGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---------ccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  79999998876632 11111         1333489999999999999998  999999


Q ss_pred             ecCCC---------------CccchHHHHHhCC--CCceEEEEeecceecc-CCCCC---CCCCCCC--CCCCcc-ccHH
Q 025908           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLP---HCETDTV--DPKSRH-KGKL  133 (246)
Q Consensus        78 ~~~~~---------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~-~~~~~---~~e~~~~--~~~~~~-~~k~  133 (246)
                      |+|+.               ++.++++++++|.  ++++|||+||.++++. ....+   .+|..+.  .+.+.| .+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99875               3457999999988  8999999999999875 11112   2444443  244456 9999


Q ss_pred             HHHHHHHh-c--------CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          134 NTESVLES-K--------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       134 ~~e~~~~~-~--------~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      .+|+++.+ .        .+..++|||+.||||++.. ..+.+......+......+++....+++|++|+|.+.+.+.+
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99998753 2        2889999999999997543 344455666666555666888889999999999999988763


Q ss_pred             C-------CCCCCeeEEeeCCeeec-HHHHHHHHHHHhCCCcce-eecCC
Q 025908          205 N-------EKASRQVFNISGEKYVT-FDGLARACAKVTGYCIAG-CWISG  245 (246)
Q Consensus       205 ~-------~~~~~~~~~~~~~~~~s-~~~l~~~~~~~~g~~~~~-~~~p~  245 (246)
                      .       ....|+.|++++++++. +++|+..+.+.+|.+.+. ..+|+
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp~  280 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLPL  280 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCCC
Confidence            2       34578999999999999 999999999999998776 66764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=2e-35  Score=238.44  Aligned_cols=232  Identities=57%  Similarity=0.958  Sum_probs=187.9

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+|++|++.|+++||+|++++|+..... .+..........+ ..+++++.+|+.|   +..++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQ-KMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcchh-hhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            99999999999999999999999999875421 1111000000011 2468999999876   44455445899999999


Q ss_pred             CCCccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeecceeeCCC
Q 025908           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  158 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~~~i~g~~  158 (246)
                      +.....+++++++|+  ++++||++||.++|+.....+..|..+..|..   +|..+|.++++.+++++++||+++|||.
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence            888788999999987  89999999999999876666677776665544   7999999999999999999999999997


Q ss_pred             CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      .......+++..+..+.++.+++++.+.++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            65555566777777888777778888899999999999999999988655678999999999999999999999999876


Q ss_pred             ce
Q 025908          239 AG  240 (246)
Q Consensus       239 ~~  240 (246)
                      ++
T Consensus       296 ~i  297 (378)
T PLN00016        296 EI  297 (378)
T ss_pred             ce
Confidence            54

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-35  Score=217.99  Aligned_cols=232  Identities=22%  Similarity=0.267  Sum_probs=195.2

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||.||||+++++.++++..  +|++++.=.--. .+.+...      ...++..++++|+.|.+.+.+++++..+|+|+
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~------~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV------EDSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh------hcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            79999999999999999854  456655422110 1111110      11468999999999999999999987899999


Q ss_pred             ecCCC----------------CccchHHHHHhCC--CC-ceEEEEeecceeccCCC--CCCCCCCCCCCCCcc-ccHHHH
Q 025908           78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDL--LPHCETDTVDPKSRH-KGKLNT  135 (246)
Q Consensus        78 ~~~~~----------------~~~~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~~~~~-~~k~~~  135 (246)
                      |+|+.                |+.++.+|+++++  .. -||+++||..|||.-..  ..++|.+|..|.++| .||+..
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas  159 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS  159 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence            99885                3457899999987  32 49999999999997443  369999999999999 999999


Q ss_pred             HHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       136 e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      ..+++    .+|++++|.|+++-|||.+. .-+++.++..+..++++++.|+|.+.++|++++|-|+++..++.++.. |
T Consensus       160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G  238 (340)
T COG1088         160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G  238 (340)
T ss_pred             HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence            88775    58999999999999999864 357888889999999999999999999999999999999999998875 9


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      ++|||+++...+..++++.+++.+|+..+
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999998665

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2e-33  Score=229.80  Aligned_cols=241  Identities=18%  Similarity=0.227  Sum_probs=177.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc------CCCCCC--chhhh---h-hcCceEEEEccCCCHHHHHHhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEFA---E-FSSKILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~~~--~~~~~---~-~~~~v~~~~~D~~~~~~~~~~~   68 (246)
                      |||+||||++|++.|+++|++|++++|.......      ......  .....   . ...+++++.+|+.|.+.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            7999999999999999999999998754321100      000000  00000   0 0236899999999999999999


Q ss_pred             hcCCccEEEecCCCC-------------------ccchHHHHHhCC--CCc-eEEEEeecceeccCCCCCCC--------
Q 025908           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHC--------  118 (246)
Q Consensus        69 ~~~~~d~vi~~~~~~-------------------~~~~~~l~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~--------  118 (246)
                      ++.++|+|||+|+..                   ..++.+++++|+  +++ +||++||..+||... .+.+        
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~  211 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH  211 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence            866799999998541                   124667888876  665 899999999998532 1222        


Q ss_pred             ---CC---CCCCCCCcc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCCC------------------chHHHHHH
Q 025908          119 ---ET---DTVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH  169 (246)
Q Consensus       119 ---e~---~~~~~~~~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~------------------~~~~~~~~  169 (246)
                         |+   .+..|.+.| .+|..+|.+++    +.+++++++||+++|||++..                  ..+..++.
T Consensus       212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~  291 (442)
T PLN02572        212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV  291 (442)
T ss_pred             ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence               12   245566666 99999998774    469999999999999997432                  23445566


Q ss_pred             HHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC--eeEEeeCCeeecHHHHHHHHHHH---hCCCcceeec
Q 025908          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGYCIAGCWI  243 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~~~~~---~g~~~~~~~~  243 (246)
                      .+..++++.+++++++.++|+|++|++++++.+++++...+  .+||+++ +.+|+.|+++.+.+.   +|.+.++...
T Consensus       292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~  369 (442)
T PLN02572        292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISV  369 (442)
T ss_pred             HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeC
Confidence            66678777888899999999999999999999997643233  5899977 679999999999999   8876555443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2e-33  Score=225.70  Aligned_cols=229  Identities=19%  Similarity=0.236  Sum_probs=179.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||+++++.|.++||+|++++|.........           ...++++.+|+.+.+.+..+++  ++|+|||++
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998654311100           1246788899999999888887  899999998


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCceEEEEeecceeccCCC----CCCCCCC--CCCCCCcc-ccHHH
Q 025908           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN  134 (246)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~--~~~~~~~~-~~k~~  134 (246)
                      +..                 ..++.+++++|+  ++++|||+||..+|+....    .++.|+.  +..|.+.| .+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            642                 224577888876  7899999999999986432    2355554  56677777 99999


Q ss_pred             HHHHHH----hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHh-CCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       135 ~e~~~~----~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +|++++    +.+++++++||+++|||+..     ......++..+.. +.++.+++++.+.++++|++|++++++.+++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            999764    46899999999999999642     1234456655544 4667778888999999999999999999887


Q ss_pred             CCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++  .+++||+++++.+|++|+++.+.+..|.+.++...|
T Consensus       254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~  291 (370)
T PLN02695        254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIP  291 (370)
T ss_pred             cc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecC
Confidence            64  357999999999999999999999999766655443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.4e-33  Score=225.77  Aligned_cols=225  Identities=19%  Similarity=0.281  Sum_probs=178.0

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-CHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||+|++|++.|+++ |++|++++|+..+......          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999987 6999999986543221111          246899999997 7778888887  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCC-------CCCCcc-ccHH
Q 025908           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (246)
                      +++..                ..++.+++++|+ ..++|||+||..+||...+.+++|+.+.       .|.+.| .+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98752                224678888877 3479999999999986554455555431       344456 9999


Q ss_pred             HHHHHHH----hcCCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       134 ~~e~~~~----~~~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|++++    +.+++++++||+++|||+..         ..++..++..+..++++.+.+++++.+++||++|++++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9999875    46899999999999999742         2355677777778888777778888999999999999999


Q ss_pred             HHhcCCC--CCCeeEEeeCC-eeecHHHHHHHHHHHhCCC
Q 025908          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~-~~~s~~~l~~~~~~~~g~~  237 (246)
                      .+++++.  ..+++||++++ ..+|+.|+++.+.+.+|..
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~  274 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEY  274 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCc
Confidence            9998753  35789999997 4799999999999999853

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.9e-33  Score=227.87  Aligned_cols=230  Identities=20%  Similarity=0.230  Sum_probs=173.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++ |++|++++|...+....... ..   .....+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~---~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DT---VPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-cc---ccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 59999999875542211110 00   0012479999999999999999998  89999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCC-------------------
Q 025908           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------------------  123 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------------------  123 (246)
                      |+..                ..++.+++++|+ ..++||++||..+||.....+..|+.+.                   
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9742                113567788776 4489999999999986433222332221                   


Q ss_pred             ---CCCCcc-ccHHHHHHHHHh----cCCceEEeecceeeCCCCC------------CchHHHHHHHHHhCCCcccCCCC
Q 025908          124 ---DPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  183 (246)
Q Consensus       124 ---~~~~~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                         .|.+.| .+|..+|+++..    .+++++++||+++|||+..            ...+..++..+.++.++.+++++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence               122345 899999998853    6899999999999999732            11333445666677777777888


Q ss_pred             CceeeeeeHHHHHHHHHHHhcCCC-CCCeeEEeeCC-eeecHHHHHHHHHHHhCC
Q 025908          184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKVTGY  236 (246)
Q Consensus       184 ~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~~~-~~~s~~~l~~~~~~~~g~  236 (246)
                      .+.+++||++|+|++++.+++++. ..+++||++++ +.+++.|+++.+.+.+|.
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            888999999999999999998753 35679999997 589999999999999884

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=9.8e-34  Score=215.14  Aligned_cols=206  Identities=33%  Similarity=0.478  Sum_probs=178.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|+++++.|+++|+.|+.+.|+........          ...+++++.+|+.|.+.+.++++..++|+|||++
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----------~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE----------KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH----------HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCcccccccccccccccc----------ccceEEEEEeeccccccccccccccCceEEEEee
Confidence            699999999999999999999999999887731110          1138999999999999999999977789999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..                ...+.+++++|+  ++++||++||..+|+.....+++|+.+..|.+.| .+|...|+.++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            874                124677888877  7789999999999998877788999988888888 89999999875 


Q ss_pred             ---hcCCceEEeecceeeCCC----CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeE
Q 025908          141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (246)
                         +.+++++++||+.+|||.    ....++..++..+..++++.+++++.+.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               358999999999999998    4566788899999999988888999999999999999999999999887678999


Q ss_pred             Eee
Q 025908          214 NIS  216 (246)
Q Consensus       214 ~~~  216 (246)
                      |++
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.1e-32  Score=221.39  Aligned_cols=232  Identities=20%  Similarity=0.221  Sum_probs=179.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||+++++.|+++|++++++.++..+... .....  .. .....+.++.+|+.|.+.+.+++++.++|+|||++
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~--~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN-LMSLA--PV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc-hhhhh--hc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999876655443322111 00000  00 00236788899999999999999865699999999


Q ss_pred             CCC----------------ccchHHHHHhCC-----------CCceEEEEeecceeccC--CCCCCCCCCCCCCCCcc-c
Q 025908           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-----------~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~  130 (246)
                      +..                ..++.+++++|.           ++++||++||..+|+..  ...+++|+.+..|.+.| .
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            752                224566777753           35799999999999853  23457888887777777 9


Q ss_pred             cHHHHHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      +|..+|.+++    +.+++++++||+++|||++. ..++..++..+..+.++.+++++++.++++|++|+++++..+++.
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999998774    46899999999999999863 345666667777777777788889999999999999999999976


Q ss_pred             CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          206 EKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +. .+++||+++++++|++|+++.+++.+|..
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  273 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEEL  273 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence            54 46799999999999999999999998853

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=5.5e-33  Score=238.01  Aligned_cols=225  Identities=20%  Similarity=0.220  Sum_probs=178.9

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHH-HHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++ ||+|++++|..........          ..+++++.+|+.|.+. +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654221111          2478999999998655 567787  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCC-------CCCCcc-ccHH
Q 025908           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (246)
                      +|+..                ..++.+++++|+ ..++|||+||..+||.....+++|+.+.       .|.+.| .+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            98742                235677888887 3389999999999997555567777643       233445 9999


Q ss_pred             HHHHHHH----hcCCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       134 ~~e~~~~----~~~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|++++    +++++++++||+++|||+..         ...+..++..+..++++.+++++.+.++|+|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999884    46899999999999999742         1345667777777777777788889999999999999999


Q ss_pred             HHhcCCC--CCCeeEEeeCCe-eecHHHHHHHHHHHhCCC
Q 025908          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYC  237 (246)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~-~~s~~~l~~~~~~~~g~~  237 (246)
                      .+++++.  ..+++||+++++ .+|++|+++.+.+.+|.+
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            9997642  246799999985 799999999999999854

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.8e-33  Score=226.58  Aligned_cols=229  Identities=21%  Similarity=0.229  Sum_probs=178.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|............     . ...+++++.+|+.+.     .+.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~-----~-~~~~~~~~~~Di~~~-----~~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL-----F-GNPRFELIRHDVVEP-----ILL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh-----c-cCCceEEEECccccc-----ccc--CCCEEEECc
Confidence            799999999999999999999999998643311111100     0 024678888888654     244  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCC-----CCCCCCcc-ccHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~  137 (246)
                      +..                +.++.+++++|+ ...+||++||..+||.....+.+|+.     +..|.+.| .+|..+|+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            742                224788999987 33589999999999976555666653     55555556 99999999


Q ss_pred             HHH----hcCCceEEeecceeeCCCCC---CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      +++    +.+++++++||+++|||+..   ...+..++..+..+.++.+++++.+.++|+|++|+++++..+++.+.  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            874    45899999999999999742   34566778888888888888888899999999999999999987543  4


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++||+++++.+|+.|+++.+.+.+|.+..+.+.|
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p  384 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSATIEFKP  384 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCC
Confidence            6999999999999999999999999776555443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=6.4e-33  Score=216.57  Aligned_cols=210  Identities=20%  Similarity=0.206  Sum_probs=175.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|++.|++|++++|.                          .+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999874                          25888999999999866679999999


Q ss_pred             CCCc----------------cchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +...                .++.+++++++ ...+||++||.++|+.....+++|+.+..|.+.| .+|..+|+.++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            7521                13667777776 2248999999999987666778888888887777 9999999999988


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +++++++||+++||++....+...++..+..+..+...++  ..+++++++|+|+++..+++.+...+++||+++++.++
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            9999999999999997544556666666666666555443  56899999999999999998764457899999999999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 025908          223 FDGLARACAKVTGYCI  238 (246)
Q Consensus       223 ~~~l~~~~~~~~g~~~  238 (246)
                      +.|+++.+++.+|.+.
T Consensus       217 ~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       217 WYEFAQAIFEEAGADG  232 (287)
T ss_pred             HHHHHHHHHHHhCccc
Confidence            9999999999999764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.5e-33  Score=217.49  Aligned_cols=209  Identities=18%  Similarity=0.183  Sum_probs=168.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||++|++.|+++| +|++++|...                      .+.+|+.|.+.+.+++++.++|+|||+|
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7988887532                      1357999999999999866799999999


Q ss_pred             CCCc----------------cchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +...                .++.+++++|+ ...+|||+||..||+.....+++|+++..|.+.| .+|..+|++++.+
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            8631                23667888887 3358999999999987666789999999998877 9999999999888


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCC--CCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      ..+++++|++++|||+. ..+...++..+.+++++.++++  +.....+...+|++.++..++..+.. +++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCC
Confidence            78899999999999964 3456677777777777777766  44444445566778877777755432 36999999999


Q ss_pred             ecHHHHHHHHHHHh
Q 025908          221 VTFDGLARACAKVT  234 (246)
Q Consensus       221 ~s~~~l~~~~~~~~  234 (246)
                      +|+.|+++.+.+.+
T Consensus       221 ~s~~e~~~~i~~~~  234 (299)
T PRK09987        221 TTWHDYAALVFEEA  234 (299)
T ss_pred             ccHHHHHHHHHHHH
Confidence            99999999997754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.9e-32  Score=217.80  Aligned_cols=236  Identities=17%  Similarity=0.177  Sum_probs=180.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+||||++|++.|+++|++|++++|...... ..+.............+++++.+|++|.+.+.+++++.++|+|||+
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~   85 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL   85 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999864310 1111000000000024689999999999999999986678999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CC---ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      |+..                ..++.+++++|.  ++   ++||++||..+||.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  165 (343)
T TIGR01472        86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW  165 (343)
T ss_pred             CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            9852                124677888876  43   48999999999997655678888888888877 99999999


Q ss_pred             HHH----hcCCceEEeecceeeCCCCCCc----hHHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      +++    +.++++++.|+.++|||+....    .+..++..+..+.. ...++++.+.++|+|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-  244 (343)
T TIGR01472       166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-  244 (343)
T ss_pred             HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence            884    3578899999999999864322    23334445555553 3345888899999999999999999997653 


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                       +++||+++++++|+.|+++.+.+.+|.+.
T Consensus       245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       245 -PDDYVIATGETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             -CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence             36899999999999999999999999654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=8.3e-33  Score=218.37  Aligned_cols=214  Identities=18%  Similarity=0.197  Sum_probs=168.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|+++++.|+++||+|++++|+.++. ..+.          ..+++++.+|+.|++++.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            79999999999999999999999999986542 1111          2579999999999999999998  999999987


Q ss_pred             CCCc-----------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceE
Q 025908           81 GREA-----------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWT  147 (246)
Q Consensus        81 ~~~~-----------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~  147 (246)
                      +...           .++.+++++|+  ++++||++||.++..          .+  +..+..+|.++|+++++++++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~----------~~--~~~~~~~K~~~e~~l~~~~l~~t  140 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ----------YP--YIPLMKLKSDIEQKLKKSGIPYT  140 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc----------cC--CChHHHHHHHHHHHHHHcCCCeE
Confidence            6421           24578999887  899999999865421          00  11234789999999999999999


Q ss_pred             EeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHH
Q 025908          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (246)
Q Consensus       148 ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~  227 (246)
                      ++||+.+|+..     ...+......+.+..+ .++.+.+++|+++|+|++++.++.++...+++||+++++.+|+.|++
T Consensus       141 ilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~  214 (317)
T CHL00194        141 IFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEII  214 (317)
T ss_pred             EEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHH
Confidence            99999887641     1112222223344433 34456789999999999999999877667899999999999999999


Q ss_pred             HHHHHHhCCCcceeecCC
Q 025908          228 RACAKVTGYCIAGCWISG  245 (246)
Q Consensus       228 ~~~~~~~g~~~~~~~~p~  245 (246)
                      +.+.+.+|.+..+.++|.
T Consensus       215 ~~~~~~~g~~~~~~~vp~  232 (317)
T CHL00194        215 SLCEQLSGQKAKISRVPL  232 (317)
T ss_pred             HHHHHHhCCCCeEEeCCH
Confidence            999999999888777764

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=4.3e-32  Score=221.37  Aligned_cols=228  Identities=19%  Similarity=0.215  Sum_probs=175.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|............      -...+++++.+|+.+.     ++.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~------~~~~~~~~i~~D~~~~-----~l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH------FSNPNFELIRHDVVEP-----ILL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh------ccCCceEEEECCccCh-----hhc--CCCEEEEee
Confidence            799999999999999999999999987543211111000      0024678888998764     233  799999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCC-----CCCCCCcc-ccHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~  137 (246)
                      +..                +.++.+++++|+ ...+||++||..+|+.....+.+|+.     +..+.+.| .+|..+|+
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            742                224678999987 22489999999999876555566653     33444556 99999999


Q ss_pred             HHH----hcCCceEEeecceeeCCCC---CCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      ++.    +.+++++++||+++|||+.   ....+..++..+..+.++.+++++.+.++++|++|+|++++.++++..  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            874    4689999999999999973   234556677777777888888888899999999999999999987543  4


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcceeec
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGCWI  243 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (246)
                      ++||+++++.+|+.|+++.+.+.+|.+..+.+.
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~  382 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDPNAKIEFR  382 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCCCCceeeC
Confidence            699999999999999999999999876555443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.4e-31  Score=211.88  Aligned_cols=230  Identities=22%  Similarity=0.281  Sum_probs=181.5

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||||++|+++++.|++.|  ++|+++.|..... ...+...     . ...+++++.+|+.|++.+.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADL-----E-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhh-----c-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999987  7899887643211 1111100     0 0246888999999999999999855599999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--CC-ceEEEEeecceeccCCCC-CCCCCCCCCCCCcc-ccHHHHH
Q 025908           78 DINGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~-~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      |+++...                .++.+++++|.  .. .++|++||..+||..... +.+|..+..|...| .+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            9998532                13556777765  23 389999999999864432 57788877777767 9999999


Q ss_pred             HHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      .+++    +.+++++++||+.+|||... ..++..++..+..+.++++++++++.++++|++|+|+++..++++.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            8774    46899999999999999753 45666777777777777777888889999999999999999997653 567


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +||+++++++++.|+++.+.+.+|.+
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKD  263 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            99999999999999999999999965

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=5.2e-33  Score=215.56  Aligned_cols=214  Identities=26%  Similarity=0.327  Sum_probs=163.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|++|++|.+.|.+.|++|+++.|.                          ..|+.|.+.+.+.+++.++|+|||++
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999998665                          34788999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +..                ...+.+++++|. ...++||+||..||++..+.+++|++++.|.+.| ++|.++|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            863                235677888887 5579999999999988878889999999999988 9999999999987


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC---CCCeeEEeeCCe
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~~~  219 (246)
                      ..++.|+|++++||+ ...+++.+++..+.+++.+.+..+  +.+++++++|+|+++..++++..   ...++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            679999999999999 345678888888888888887654  68899999999999999997643   235799999999


Q ss_pred             eecHHHHHHHHHHHhCCCc-ceeec
Q 025908          220 YVTFDGLARACAKVTGYCI-AGCWI  243 (246)
Q Consensus       220 ~~s~~~l~~~~~~~~g~~~-~~~~~  243 (246)
                      .+|+.|+++.+++.+|.+. .+.++
T Consensus       217 ~~S~~e~~~~i~~~~~~~~~~i~~~  241 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDPELIKPV  241 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCTTEEEEE
T ss_pred             ccCHHHHHHHHHHHhCCCCceEEec
Confidence            9999999999999999876 44444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.2e-31  Score=211.31  Aligned_cols=215  Identities=20%  Similarity=0.218  Sum_probs=168.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|++.|++|+++.+.                         ..+|+.+.+++.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            7999999999999999999988766432                         136999999999999877899999998


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC----CCCCCC-cc-ccHHHH
Q 025908           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT  135 (246)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~-~~-~~k~~~  135 (246)
                      +..                 ..++.+++++|+  ++++||++||..+|+.....+.+|++    +..|.+ .| .+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            642                 124677888887  78899999999999976667788875    444543 25 899999


Q ss_pred             HHHHH----hcCCceEEeecceeeCCCCC-----CchHHHHHH----HHHhCCCccc-CCCCCceeeeeeHHHHHHHHHH
Q 025908          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFH----RLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       136 e~~~~----~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      |++++    ..+++++++||+.+|||+..     ...+..++.    ....+.++.+ ++++.+.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            97653    46899999999999999742     122333332    2334555544 6778888999999999999999


Q ss_pred             HhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCccee
Q 025908          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGC  241 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~  241 (246)
                      ++++.. ..+.||+++++.+++.|+++.+.+.+|.+..+.
T Consensus       218 ~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~  256 (306)
T PLN02725        218 LMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEGELV  256 (306)
T ss_pred             HHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCCcee
Confidence            997653 346789999999999999999999999765443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.7e-31  Score=229.87  Aligned_cols=231  Identities=23%  Similarity=0.325  Sum_probs=182.7

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||||++|++.|+++  +++|++++|..... ...+...      ....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS------KSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc------ccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999998  68999998753110 1111000      00257899999999998888877555899999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--C-CceEEEEeecceeccCCCCC---CCCCCCCCCCCcc-ccHHH
Q 025908           78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~---~~e~~~~~~~~~~-~~k~~  134 (246)
                      |+|+...                .++.+++++|+  + +++|||+||..+||.....+   ..|+.+..|.+.| .+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            9998632                23677888876  4 78999999999998654322   3566666677666 99999


Q ss_pred             HHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       135 ~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +|++++    +.+++++++||+++|||++. ..++..++..+..+.++.+++++.+.++++|++|+|+++..+++++. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999885    36899999999999999754 34566677777778888888888899999999999999999987653 4


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +++||+++++.+++.|+++.+++.+|.+.
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence            67999999999999999999999999754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=8e-32  Score=212.35  Aligned_cols=219  Identities=18%  Similarity=0.167  Sum_probs=160.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HH-HHHhhhc---CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~-~~~~~~~---~~~   73 (246)
                      |||+||||++|++.|+++|++++++.|+......               ...+..+|+.|.   +. +..+++.   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH---------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            7999999999999999999988887776543110               011223455443   33 2333321   269


Q ss_pred             cEEEecCCCC--------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           74 DVVYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        74 d~vi~~~~~~--------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      |+|||+|+..              ..++.+++++|+ ...+||++||..+|+.....+.+|..+..|.+.| .+|..+|+
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  149 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE  149 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence            9999998742              224667888887 3337999999999987655567777777787767 99999998


Q ss_pred             HHHh----cCCceEEeecceeeCCCCCC-c----hHHHHHHHHHhCCCcccC-CCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      ++++    .+++++++||+++|||+... .    ....+...+.++....++ ++++..++++|++|+|++++.+++.+.
T Consensus       150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~  229 (308)
T PRK11150        150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV  229 (308)
T ss_pred             HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence            7754    58999999999999997532 1    223344556666544343 555678999999999999999887643


Q ss_pred             CCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          208 ASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       208 ~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                        +++||+++++++|+.|+++.+.+.+|.
T Consensus       230 --~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        230 --SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             --CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence              469999999999999999999999885

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.5e-31  Score=210.23  Aligned_cols=233  Identities=19%  Similarity=0.178  Sum_probs=178.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+||||+++++.|+++|++|++++|.+.... ..+....... .....+++++.+|+.|.+.+.++++..++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP-HPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc-ccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            799999999999999999999999998764311 1111100000 00024688999999999999999986678999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCc-----eEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (246)
                      |+..                ..++.+++++|.  +++     +||++||.++||.... +.+|+.+..|.+.| .+|..+
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9862                124567788765  443     8999999999997654 77888888888777 999999


Q ss_pred             HHHHH----hcCCceEEeecceeeCCCCCCch----HHHHHHHHHhCCCccc-CCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       136 e~~~~----~~~~~~~ilR~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      |.+++    +++++++..|+.+.|||+....+    +..++..+..+..+.+ .+++++.++|+|++|+|++++.+++++
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    46788889999999998643322    2233445556655444 478889999999999999999999865


Q ss_pred             CCCCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          207 KASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      .  ++.||+++++++|+.|+++.+.+.+|.+
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            3  4689999999999999999999999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=5.1e-31  Score=197.88  Aligned_cols=207  Identities=23%  Similarity=0.247  Sum_probs=181.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||++|++|.+|.+.|. .+++|++++|..                          .|++|++.+.+++.+.+||+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999998 668999988752                          5889999999999988999999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +..                ..+..++.++|+ --.++||+||..||++..+.++.|++++.|.+.| ++|+..|..+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            863                235778888887 4569999999999998888899999999999998 9999999999999


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +.+..|+|.+++||... .++...++....+++.+.+..+  +..++++..|+|+++..++..... +++||+++...+|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCccc
Confidence            99999999999999864 5677788888888988887654  888999999999999999987643 4499999988899


Q ss_pred             HHHHHHHHHHHhCCCc
Q 025908          223 FDGLARACAKVTGYCI  238 (246)
Q Consensus       223 ~~~l~~~~~~~~g~~~  238 (246)
                      |.||++.+.+.++.+.
T Consensus       215 wydfa~~I~~~~~~~~  230 (281)
T COG1091         215 WYEFAKAIFEEAGVDG  230 (281)
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.98  E-value=4.9e-31  Score=211.14  Aligned_cols=228  Identities=15%  Similarity=0.185  Sum_probs=177.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||+++++.|+++|++|++++|+.........     . ......+.++.+|+.+.+++.+++++.++|+|||++
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE-----L-LNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH-----H-HhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999987654211100     0 001246778999999999999999866789999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CceEEEEeecceeccCC-CCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +..                ..++.+++++++  + +++||++||..+|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            842                224667788766  3 68999999999998643 2356777777777767 8999999887


Q ss_pred             Hh-----------cCCceEEeecceeeCCCCC--CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          140 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       140 ~~-----------~~~~~~ilR~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      +.           .+++++++||+++|||++.  ..+++.++..+..+..+.+ +++.+.++|+|++|++++++.++++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            53           2899999999999999742  3456777788877777665 56788999999999999999887542


Q ss_pred             ----CCCCeeEEeeCC--eeecHHHHHHHHHHHhC
Q 025908          207 ----KASRQVFNISGE--KYVTFDGLARACAKVTG  235 (246)
Q Consensus       207 ----~~~~~~~~~~~~--~~~s~~~l~~~~~~~~g  235 (246)
                          ...+++||++++  ++++..++++.+.+.++
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW  277 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence                123579999974  68999999999988765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.98  E-value=1.6e-30  Score=208.76  Aligned_cols=242  Identities=19%  Similarity=0.250  Sum_probs=179.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|++|++.|+++|++|++++|............ .........++.++.+|+++++.+..++++.++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRV-KELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHH-HHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            799999999999999999999999987643311000000 0000001246889999999999999998766899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.+++++|+  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|++++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            7531                23557888876  6789999999999987666778999888887777 999999998852


Q ss_pred             -----cCCceEEeecceeeCCCCC-------Cc---hHHHHHHHHHhCC--CcccCC------CCCceeeeeeHHHHHHH
Q 025908          142 -----KGVNWTSLRPVYIYGPLNY-------NP---VEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLARA  198 (246)
Q Consensus       142 -----~~~~~~ilR~~~i~g~~~~-------~~---~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~~  198 (246)
                           .+++++++|++++||++..       ..   .+..++..+..+.  .+.+++      ++.+.+++||++|+|++
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a  249 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADG  249 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHH
Confidence                 4678999999999996421       11   1222344444433  333333      56788999999999999


Q ss_pred             HHHHhcC----CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeec
Q 025908          199 FVQVLGN----EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWI  243 (246)
Q Consensus       199 ~~~~~~~----~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (246)
                      ++.++.+    +...+++||+++++++|++|+++.+.+.+|.+.+....
T Consensus       250 ~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~  298 (352)
T PLN02240        250 HIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLA  298 (352)
T ss_pred             HHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeC
Confidence            9888753    23345799999999999999999999999977665443

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.98  E-value=1.2e-30  Score=209.32  Aligned_cols=230  Identities=20%  Similarity=0.227  Sum_probs=177.3

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+||||++|++.|+++|++ |+++.|..... .......      .....++++.+|+.|.+++.+++++.++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV------SDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhc------ccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999976 55555432110 0000000      002357889999999999999998667999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-----------CCceEEEEeecceeccCC---------C-CCCCCCC
Q 025908           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCETD  121 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~-----------~~~~~i~~Ss~~v~~~~~---------~-~~~~e~~  121 (246)
                      +|+..                ..++.+++++|.           ++++||++||..+|+...         . .+++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99852                124677888764           246899999999998521         1 2367777


Q ss_pred             CCCCCCcc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +..|.+.| .+|..+|.+++    ..+++++++|++.+|||+.. ...+..++..+..+..+.+++++++.++++|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            87888777 99999998774    46899999999999999853 34556666667677777777888899999999999


Q ss_pred             HHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      |++++.+++.+. .+++||+++++.+++.++++.+++.+|..
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence            999999987643 46899999999999999999999999853

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.98  E-value=5e-31  Score=193.37  Aligned_cols=229  Identities=23%  Similarity=0.321  Sum_probs=189.4

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||.||||++.+..+...  .+++..+..=.-.. ...+...      ...++..++.+|+.+...+...+....+|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~------~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV------RNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh------ccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999886  34555443311110 1111111      11478999999999999999999878899999


Q ss_pred             ecCCC----------------CccchHHHHHhCC---CCceEEEEeecceeccCCCCCCC-CCCCCCCCCcc-ccHHHHH
Q 025908           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        78 ~~~~~----------------~~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~-e~~~~~~~~~~-~~k~~~e  136 (246)
                      |+|+.                ++-++..++++++   ++++||++||..|||+....+.. |.+.+.|.+.| .+|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99875                2346778999877   78999999999999988776666 88889999988 9999999


Q ss_pred             HHHH----hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      ..++    +++++++++|.++||||++.. ..++.|+...+++++.++.+++.+.++++|++|+++++..+++.+. .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9885    578999999999999998653 4667788888889999999999999999999999999999998854 689


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +|||+...+.+..|+++.+.+.+.+
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~  269 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEK  269 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHH
Confidence            9999999999999999999998875

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.98  E-value=2.7e-30  Score=206.25  Aligned_cols=238  Identities=23%  Similarity=0.338  Sum_probs=175.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|+++|++|++++|........+.     ..... ..++.++.+|+.|.+.+.++++..++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999998875433111100     00000 23577889999999999999875679999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-CCCCcc-ccHHHHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL  139 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~~~~~-~~k~~~e~~~  139 (246)
                      ++...                .++.+++++|+  ++++||++||..+|+.....+++|+.+. .|...| .+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            87532                13567788876  7889999999999987666677888776 566667 8999999988


Q ss_pred             Hh-----cCCceEEeecceeeCCCCC-----------CchHHHHHHHHHhCC--CcccCC------CCCceeeeeeHHHH
Q 025908          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL  195 (246)
Q Consensus       140 ~~-----~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~  195 (246)
                      +.     .+++++++|++.+||+...           ..+.. ++..+..+.  .+.+++      ++.+.++++|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            53     3689999999999996310           11222 233333332  233322      56778999999999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |++++.+++..  ...+++||+++++.+|+.|+++.+.+.+|.+.+....|
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  290 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCC
Confidence            99999998752  22357999999999999999999999999876654433

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=2.8e-30  Score=204.17  Aligned_cols=223  Identities=30%  Similarity=0.424  Sum_probs=179.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCc-cEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-d~vi~~   79 (246)
                      ||||||+|++|++.|+++|++|++++|...+.....            .++.++.+|+++.+.+.++++  .. |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999877732111            367889999999888888887  55 999999


Q ss_pred             CCCC-----------------ccchHHHHHhCC--CCceEEEEeecceeccC-CCCCCCCC-CCCCCCCcc-ccHHHHHH
Q 025908           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~-~~~~~~~~~-~~k~~~e~  137 (246)
                      ++..                 +.++.+++++|+  ++++|||.||.++++.. ...+.+|+ .+..|.+.| .+|..+|+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8753                 124677888877  89999998888887754 33367787 677777655 99999999


Q ss_pred             HHHh----cCCceEEeecceeeCCCCCCc----hHHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      .++.    .+++++++||+++|||++...    ....++.....+.+ ....+++...++++|++|++++++.+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            9864    369999999999999986543    34444555666665 55556777788999999999999999998764


Q ss_pred             CCeeEEeeCCe-eecHHHHHHHHHHHhCCCcc
Q 025908          209 SRQVFNISGEK-YVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       209 ~~~~~~~~~~~-~~s~~~l~~~~~~~~g~~~~  239 (246)
                      .  .||++++. +++..|+++.+.+.+|.+.+
T Consensus       232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         232 G--VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             c--EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            3  99999997 89999999999999998755

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=2.5e-30  Score=189.70  Aligned_cols=225  Identities=22%  Similarity=0.297  Sum_probs=181.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||.||||++|++.|..+||+|++++.........+.....      ..+++++.-|+..+     ++.  .+|.|+|+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~------~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG------HPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc------CcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            79999999999999999999999999988775443332111      35677777776654     555  899999998


Q ss_pred             CC----------------CccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCC-----CCCCCCCcc-ccHHHHHH
Q 025908           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~e~  137 (246)
                      +.                |..++.+++..|+ -.+||++.||..|||+....|..|+     .|..|.+-| ..|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            76                2346777877776 4589999999999998655454444     234455556 89999999


Q ss_pred             HHH----hcCCceEEeecceeeCCC---CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      ++.    +.|+.+.|.|+.+.|||.   +.......+...+.++.++.++++|.+.++|.++.|+.+.++++++++..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            884    578999999999999997   33556778888999999999999999999999999999999999988754  


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      +-+|+++++.+|+.||++++.+..+....+
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s~i  287 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVSEI  287 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCcce
Confidence            349999999999999999999998655443

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.97  E-value=5.5e-30  Score=202.56  Aligned_cols=226  Identities=22%  Similarity=0.263  Sum_probs=168.2

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--CCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi   77 (246)
                      ||||||+|+++++.|.++|+ +|+++.|.....  .+..          .....+.+|+.+.+.+..+.+.  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLN----------LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhh----------hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887754331  1110          1123466788877776665531  3899999


Q ss_pred             ecCCCC--------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCC-CCCCCcc-ccHHHHHHHHH
Q 025908           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLE  140 (246)
Q Consensus        78 ~~~~~~--------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~~~~~~-~~k~~~e~~~~  140 (246)
                      |+++..              ..++.+++++|. ...+||++||.++|+.... +.+|+++ ..|.+.| .+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            999752              224667888876 2348999999999986543 4555554 3466667 89999999876


Q ss_pred             h------cCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccC------CCCCceeeeeeHHHHHHHHHHHh
Q 025908          141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       141 ~------~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +      .+++++++|++.+|||+..     ...+..++..+..+..+.++      +++.+.++++|++|++++++.++
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~  230 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL  230 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence            4      3578999999999999743     13455566666666655443      45677899999999999999999


Q ss_pred             cCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCccee
Q 025908          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGC  241 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~  241 (246)
                      ..  ..+++||+++++++|+.|+++.+.+.+|.+.+..
T Consensus       231 ~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~  266 (314)
T TIGR02197       231 EN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIE  266 (314)
T ss_pred             hc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcce
Confidence            87  3457999999999999999999999999765433

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=9.1e-30  Score=193.89  Aligned_cols=225  Identities=19%  Similarity=0.210  Sum_probs=167.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc--CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++||.|++++|++.....  .+.+.     ..-..+..++.+|+.|++++.++++  ++|.|||
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l-----~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH   84 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKL-----EGAKERLKLFKADLLDEGSFDKAID--GCDGVFH   84 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhc-----ccCcccceEEeccccccchHHHHHh--CCCEEEE
Confidence            7999999999999999999999999999887211  11111     1113468999999999999999998  9999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC---CCceEEEEeecceeccC-----CCCCCCCCCCCCCC------Ccc
Q 025908           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH  129 (246)
Q Consensus        79 ~~~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~~~~------~~~  129 (246)
                      +|.+.               +.++.+++++|+   .++|+|++||..+....     ....++|+.-.++.      ..|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            99862               347899999988   48999999998875422     22334444322211      235


Q ss_pred             -ccHHHHHHHH----HhcCCceEEeecceeeCCCCCC--chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 -KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 -~~k~~~e~~~----~~~~~~~~ilR~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                       .+|..+|+..    ++.+++.+.+.|+.++||....  +.....+....+|..-...   +....+||++|+|++.+.+
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHH
Confidence             8899999854    5678999999999999998544  2223344444555433222   2345599999999999999


Q ss_pred             hcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      ++++... ++|.+.+.. .++.|+++++.+.+...
T Consensus       242 ~E~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~  274 (327)
T KOG1502|consen  242 LEKPSAK-GRYICVGEV-VSIKEIADILRELFPDY  274 (327)
T ss_pred             HcCcccC-ceEEEecCc-ccHHHHHHHHHHhCCCC
Confidence            9998765 588788754 56999999999988643

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=1.7e-29  Score=200.94  Aligned_cols=236  Identities=22%  Similarity=0.317  Sum_probs=176.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|+++.|........+...     .. ..+++.+.+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG-----ER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh-----cc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            799999999999999999999998866433321111110     00 125788999999999999999766899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +..                ..++.+++++|.  +++++|++||..+|+.....+.+|+.+..|.+.| .+|..+|.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            853                123556777766  6789999999999987666678888888787777 999999988753


Q ss_pred             -----cCCceEEeecceeeCCCCC----------CchHHHHHHHHH-hCCCcccC------CCCCceeeeeeHHHHHHHH
Q 025908          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       142 -----~~~~~~ilR~~~i~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~~  199 (246)
                           .+++++++||+.+||+...          ..++..+..... ....+..+      .++...+++||++|+++++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 6899999999999998521          112233333322 22222222      3456778999999999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceee
Q 025908          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      +.++...  ...+++||+++++++|+.|+++.+++.+|.+.+...
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~  283 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL  283 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe
Confidence            9998652  234689999999999999999999999998876544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=5.4e-30  Score=206.75  Aligned_cols=221  Identities=22%  Similarity=0.227  Sum_probs=172.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||||+||+++++.|+++|++|++++|+..+.......   ........+++++.+|++|++.+.+++++.  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~---~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK---EDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchh---hHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            69999999999999999999999999987552110000   000011257899999999999999999743  5999999


Q ss_pred             cCCCC-----------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC-ccccHHHHHHHHHh--c
Q 025908           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLES--K  142 (246)
Q Consensus        79 ~~~~~-----------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~~e~~~~~--~  142 (246)
                      +++..           ...+.+++++++  ++++||++||.++++              |.. +..+|...|+.++.  .
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~~~~  208 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQALDS  208 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHhccC
Confidence            87642           123667888876  789999999987752              122 33789999998875  8


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCce-eeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC-ee
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV-TQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KY  220 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~-~~  220 (246)
                      +++++++||+.+|++      ...++..+..+.++.+++++... .++|+++|+|++++.++.++...+++||++++ +.
T Consensus       209 gl~~tIlRp~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~  282 (390)
T PLN02657        209 DFTYSIVRPTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKA  282 (390)
T ss_pred             CCCEEEEccHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcc
Confidence            999999999999985      23345566677777677877664 46899999999999999776666789999986 68


Q ss_pred             ecHHHHHHHHHHHhCCCcceeecC
Q 025908          221 VTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       221 ~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +|++|+++++.+.+|.+++...+|
T Consensus       283 ~S~~Eia~~l~~~lG~~~~~~~vp  306 (390)
T PLN02657        283 LTPLEQGEMLFRILGKEPKFFKVP  306 (390)
T ss_pred             cCHHHHHHHHHHHhCCCCceEEcC
Confidence            999999999999999988877766

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.5e-29  Score=201.64  Aligned_cols=222  Identities=20%  Similarity=0.256  Sum_probs=164.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccC-CCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+||||+++++.|+++|++|++++|+.+..... +.     .......+++++.+|+.+.+.+.++++  ++|+|||+
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   88 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-----ELEGGKERLILCKADLQDYEALKAAID--GCDGVFHT   88 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-----HhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEe
Confidence            79999999999999999999999999976542100 00     000001358889999999999999998  89999999


Q ss_pred             CCCC-----------ccchHHHHHhCC--CCceEEEEeec-ceeccCCC---CCCCCCC------CCCCCCcc-ccHHHH
Q 025908           80 NGRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNT  135 (246)
Q Consensus        80 ~~~~-----------~~~~~~l~~a~~--~~~~~i~~Ss~-~v~~~~~~---~~~~e~~------~~~~~~~~-~~k~~~  135 (246)
                      ++..           ..++.+++++|.  ++++||++||. .+||....   .+++|+.      +..|.+.| .+|..+
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a  168 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA  168 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence            9863           235778888876  78899999996 58874322   2466664      23355556 999999


Q ss_pred             HHHHH----hcCCceEEeecceeeCCCCCCc---hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       136 e~~~~----~~~~~~~ilR~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      |+++.    +.+++++++||+++|||+....   ....++ ....+.... .+  ...++|||++|+|++++.+++++..
T Consensus       169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~~  244 (342)
T PLN02214        169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPSA  244 (342)
T ss_pred             HHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCccc
Confidence            99874    4589999999999999975321   122222 333444332 23  3568999999999999999987653


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                       ++.||+++ ..+++.|+++.+.+.++
T Consensus       245 -~g~yn~~~-~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        245 -SGRYLLAE-SARHRGEVVEILAKLFP  269 (342)
T ss_pred             -CCcEEEec-CCCCHHHHHHHHHHHCC
Confidence             45899987 46899999999999986

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.97  E-value=6.1e-29  Score=197.73  Aligned_cols=226  Identities=19%  Similarity=0.283  Sum_probs=171.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|++|+++++.|+++|++|++++|++... ..+.          ..+++++.+|+.+.+++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            79999999999999999999999999986552 1111          2468899999999999999998  899999998


Q ss_pred             CCC--------------ccchHHHHHhCC--CCceEEEEeecceecc-CCCCCCCCCCCCCCC---Ccc-ccHHHHHHHH
Q 025908           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---SRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~---~~~-~~k~~~e~~~  139 (246)
                      +..              ..++.++++++.  +++++|++||..+|+. ....+.+|+.+..|.   ..| .+|..+|+++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            642              224567778766  6889999999999985 344567787776553   345 8999999887


Q ss_pred             Hh----cCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEE
Q 025908          140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (246)
Q Consensus       140 ~~----~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (246)
                      +.    .+++++++||+.+||++.... ....++.....+..... .  ....+++|++|+|++++.+++++. .+..|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY-V--DTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee-e--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            54    589999999999999975322 22223333333332222 2  234689999999999999998754 567887


Q ss_pred             eeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          215 ISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       215 ~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++ ++++++.|+++.+.+.+|.+.+...+|
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~  257 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPAPRVKLP  257 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCCCCCcCC
Confidence            75 578999999999999999876554443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=3.7e-29  Score=183.72  Aligned_cols=214  Identities=25%  Similarity=0.270  Sum_probs=159.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||++|+..|.+.||+|++++|++.+....+.           ..++       .-+.+.+... .++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~-~~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALT-LGIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhccc-CCCCEEEECC
Confidence            7999999999999999999999999999988533322           1111       1233334443 2799999999


Q ss_pred             CCCcc------------------chHHHHHh---CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHH
Q 025908           81 GREAD------------------EVEPILDA---LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESV  138 (246)
Q Consensus        81 ~~~~~------------------~~~~l~~a---~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~  138 (246)
                      |.+..                  .++.+.++   ++ +.+.||.-|.++.||...+..++|+++.....-...=...|+.
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~  144 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEE  144 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHH
Confidence            97532                  25555555   34 7788999999999999998899999654433223333334443


Q ss_pred             H---HhcCCceEEeecceeeCCCCCCchHHHHHHHHH--hCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeE
Q 025908          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (246)
Q Consensus       139 ~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (246)
                      .   +..|.+++++|.|.+.++.  .+.+..+....+  -|.++   |+++++++|||++|+++++..++++....| .|
T Consensus       145 a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~  218 (297)
T COG1090         145 ALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLSG-PF  218 (297)
T ss_pred             HhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cc
Confidence            3   3468999999999999985  333443333322  33344   999999999999999999999999987655 99


Q ss_pred             EeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          214 NISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       214 ~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      |++.|.|++..+|...+.+++++|..
T Consensus       219 N~taP~PV~~~~F~~al~r~l~RP~~  244 (297)
T COG1090         219 NLTAPNPVRNKEFAHALGRALHRPAI  244 (297)
T ss_pred             cccCCCcCcHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999997744

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=6.3e-29  Score=198.26  Aligned_cols=225  Identities=21%  Similarity=0.265  Sum_probs=160.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccC--CCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+||||++|++.|+++|++|++++|+.......  +...      ....+++++.+|+.|.+.+.++++  ++|+|||
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih   86 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRAL------QELGDLKIFGADLTDEESFEAPIA--GCDLVFH   86 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhc------CCCCceEEEEcCCCChHHHHHHHh--cCCEEEE
Confidence            79999999999999999999999999986542110  0000      001358899999999999999998  8999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC---CCceEEEEeecceeccCC----CCCCCCCC---------CCCCCC
Q 025908           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKS  127 (246)
Q Consensus        79 ~~~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~---------~~~~~~  127 (246)
                      +|+..               ..++.++++++.   ++++||++||..+|+...    ..+.+|..         +..|.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            99842               113556777764   478999999999997431    22344431         233555


Q ss_pred             cc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCCC---chHHHHHHHHHhCCCcccCC-CCC----ceeeeeeHHH
Q 025908          128 RH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKD  194 (246)
Q Consensus       128 ~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D  194 (246)
                      .| .+|..+|.+++    +.+++++++||+++|||+...   ..+. ++..+..++.+.+.+ ++.    ..++++|++|
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D  245 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVED  245 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHHH
Confidence            56 99999998764    468999999999999997432   1221 233444555544433 222    2379999999


Q ss_pred             HHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          195 LARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       195 ~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      ++++++.+++.+.. ++.| ++++..+++.++++.+.+.++.
T Consensus       246 ~a~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        246 VCRAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             HHHHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence            99999999987543 3467 4555678999999999988763

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=6.8e-29  Score=196.82  Aligned_cols=222  Identities=18%  Similarity=0.241  Sum_probs=162.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc--CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||+++++.|+++|++|++++|+..+...  .+..     ......+++++.+|+++.+.+.++++  ++|+|||
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih   83 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA-----LDGAKERLKLFKADLLEESSFEQAIE--GCDAVFH   83 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHh-----ccCCCCceEEEecCCCCcchHHHHHh--CCCEEEE
Confidence            7999999999999999999999999997654211  0000     00002468999999999999999998  8999999


Q ss_pred             cCCCC---------------ccchHHHHHhCC---CCceEEEEeeccee--ccC---CCCCCCCCCCCCC------CCcc
Q 025908           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KSRH  129 (246)
Q Consensus        79 ~~~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e~~~~~~------~~~~  129 (246)
                      +|+..               ..++.+++++|+   +++|||++||.++|  +..   .+.+.+|+....|      .+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  163 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY  163 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence            99752               113566777765   57899999998764  321   2234566654332      3445


Q ss_pred             -ccHHHHHHHHH----hcCCceEEeecceeeCCCCCC--chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 -~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                       .+|..+|+++.    +++++++++||+.+|||....  .....++..+..+..+  ++  .+.+++||++|+|++++.+
T Consensus       164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKA  239 (322)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHH
Confidence             89999998764    468999999999999997432  2223344444455542  22  3567999999999999999


Q ss_pred             hcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      ++++... ++||+++ +.+|+.|+++++.+.++
T Consensus       240 l~~~~~~-~~yni~~-~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        240 LETPSAN-GRYIIDG-PIMSVNDIIDILRELFP  270 (322)
T ss_pred             hcCcccC-CcEEEec-CCCCHHHHHHHHHHHCC
Confidence            9877543 5899965 57999999999999986

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=5.3e-29  Score=197.57  Aligned_cols=225  Identities=16%  Similarity=0.184  Sum_probs=163.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||+++++.|+++|++|++++|+...... ....  .......++++++.+|+.+++.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEHL--LALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHHH--HhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999997654110 0000  0000002478899999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCceEEEEeecce--eccC---CCCCCCCCCCCCCC------Ccc-c
Q 025908           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGV--YLKS---DLLPHCETDTVDPK------SRH-K  130 (246)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~v--~~~~---~~~~~~e~~~~~~~------~~~-~  130 (246)
                      +..               +.++.+++++|.   ++++||++||.++  |+..   ...+.+|+.+..|.      +.| .
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            752               123567888764   5789999999763  6532   22356776655442      234 8


Q ss_pred             cHHHHHHHHH----hcCCceEEeecceeeCCCCCC--chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +|..+|++++    +.+++++++||+.+|||....  .....++..+..+... .   +.+.++|||++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-F---PNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-C---CCCCcCeEEHHHHHHHHHHHhc
Confidence            9999998764    468999999999999997432  2233344444444432 1   2356899999999999999998


Q ss_pred             CCCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      ++... +.|++++ ++++++|+++.+.+.++.
T Consensus       241 ~~~~~-~~~~~~g-~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        241 IPSAS-GRYCLVE-RVVHYSEVVKILHELYPT  270 (322)
T ss_pred             CcCcC-CcEEEeC-CCCCHHHHHHHHHHHCCC
Confidence            76543 4788875 679999999999998764

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=9.5e-29  Score=196.29  Aligned_cols=225  Identities=17%  Similarity=0.183  Sum_probs=165.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||+++++.|+++|++|++++|+....... ...  ........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DHL--LALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HHH--HhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            79999999999999999999999998886542110 000  0000002468899999999999999997  899999999


Q ss_pred             CCCc----------------cchHHHHHhCC---CCceEEEEeecceeccC-----CCCCCCCCCCCCCC------Ccc-
Q 025908           81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH-  129 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~~~~------~~~-  129 (246)
                      +...                .++.+++++|.   +.++||++||..+|+..     ...+.+|+.+..|.      +.| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            8521                13556777764   46799999998877542     23456787776553      335 


Q ss_pred             ccHHHHHHHHH----hcCCceEEeecceeeCCCCCC--chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 ~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|..+|+++.    +.+++++++||+++|||+...  .+...++..+..++...  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999997532  23334444554554321  2  24578999999999999999


Q ss_pred             cCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +++.. +++||+++ ..+|+.|+++.+.+.++.
T Consensus       242 ~~~~~-~~~~ni~~-~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        242 ETPSA-NGRYIIDG-PVVTIKDIENVLREFFPD  272 (325)
T ss_pred             cCccc-CceEEEec-CCCCHHHHHHHHHHHCCC
Confidence            87653 45899965 579999999999999973

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=2.6e-29  Score=188.49  Aligned_cols=241  Identities=25%  Similarity=0.317  Sum_probs=189.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||.||||++.+.+|+++|+.|.++++-.+.....+......  ..-..++.++++|+.|.+.++++|+...+|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l--~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQL--LGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHh--cCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            799999999999999999999999998776643222211000  000378999999999999999999999999999998


Q ss_pred             CC----------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCC-CCCcc-ccHHHHHHHHH
Q 025908           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE  140 (246)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~-~~k~~~e~~~~  140 (246)
                      +.                +..++.+++++|+  +++.+|+.||+.+||.....|++|..+.. |.+.| ++|..+|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            76                3446889999987  89999999999999999999999999988 88877 99999999985


Q ss_pred             h----cCCceEEeecceeeC--CCC---------CCchHHHHHHHH--------HhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          141 S----KGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRL--------KAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       141 ~----~~~~~~ilR~~~i~g--~~~---------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .    .++..+.||.++++|  |..         ..+..+....-+        .-+.+... .++...+++|++-|+|+
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla~  244 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLAD  244 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeeecceeeEehHH
Confidence            3    458889999999999  321         111221111111        01222333 35578899999999999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ....++....  ..-++||++.+...+..++..+++++.|.+++...+|
T Consensus       245 ~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~  293 (343)
T KOG1371|consen  245 GHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP  293 (343)
T ss_pred             HHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC
Confidence            9999997643  2345999999999999999999999999998876654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=1.5e-28  Score=197.07  Aligned_cols=226  Identities=19%  Similarity=0.229  Sum_probs=157.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||+++++.|+++|++|++++|+....... ...  .........++++.+|+.+.+.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV-KHL--LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH-HHH--HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            79999999999999999999999999976542110 000  0000001357889999999999999998  899999998


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CceEEEEeecceeccCC-CCC-CCCCCC---------CCCCCcc-c
Q 025908           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HCETDT---------VDPKSRH-K  130 (246)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~-~~~-~~e~~~---------~~~~~~~-~  130 (246)
                      +..               ..++.+++++|.  + +++||++||.++|+... ..+ ++|+..         ..|.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            742               114567888876  4 68999999997775422 222 345421         1233345 9


Q ss_pred             cHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHHHHHHHH--HhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +|..+|.+++    +++++++++||+++|||+........++..+  ..+.... .+. .+.++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            9999998764    4689999999999999975332222222221  1222211 121 234799999999999999998


Q ss_pred             CCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      ++.. ++.| +++++.+++.|+++.+.+.++
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCc
Confidence            7643 3478 566678999999999999876

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=3.4e-28  Score=190.43  Aligned_cols=216  Identities=25%  Similarity=0.251  Sum_probs=155.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||+++++.|+++|++|++++|+..+......           ..+    .|... ..+...+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGY----KPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eee----ecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998766321110           111    12222 33445665  899999999


Q ss_pred             CCC------------------ccchHHHHHhCC--CC--ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~------------------~~~~~~l~~a~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      +..                  ..++++++++|+  ++  .+|++.|+.++|+.....+++|+.+..+.+++ ..+...|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            752                  223678888876  44  46777777788987666678888766665555 44555565


Q ss_pred             HH---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEE
Q 025908          138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (246)
Q Consensus       138 ~~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (246)
                      .+   ++.+++++++||+.+|||..  .....+.......... .+++++..+++||++|+|+++..+++++.. +++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCccc-ccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            54   34689999999999999963  2233333222211111 136778889999999999999999987653 46999


Q ss_pred             eeCCeeecHHHHHHHHHHHhCCCc
Q 025908          215 ISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       215 ~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +++++++|+.|+++.+++.+|.+.
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~~  245 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRPA  245 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCCC
Confidence            999999999999999999999764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=210.65  Aligned_cols=234  Identities=18%  Similarity=0.216  Sum_probs=168.3

Q ss_pred             CCccccchHHHHHHHH--HCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCH------HHHHHhhhcC
Q 025908            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDY------DFVKSSLSAK   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~--~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~~~~~~~~~   71 (246)
                      ||||||||++|++.|+  +.|++|++++|+..... ..+..    ..  ...+++++.+|+.++      +.+.++ +  
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~----~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAA----YW--GADRVVPLVGDLTEPGLGLSEADIAEL-G--   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHH----hc--CCCcEEEEecccCCccCCcCHHHHHHh-c--
Confidence            7999999999999999  47899999999653311 00000    00  015789999999884      445554 4  


Q ss_pred             CccEEEecCCC-------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCC---CCCCCcc-ccH
Q 025908           72 GFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKSRH-KGK  132 (246)
Q Consensus        72 ~~d~vi~~~~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~---~~~~~~~-~~k  132 (246)
                      ++|+|||+++.             ++.++.+++++|+  ++++||++||..+||.... +.+|+..   ..+.+.| .+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHH
Confidence            99999999974             2345778888877  6899999999999975433 2334331   2223334 999


Q ss_pred             HHHHHHHH-hcCCceEEeecceeeCCCCCCc--------hHHHHHHHHHhC-CCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          133 LNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       133 ~~~e~~~~-~~~~~~~ilR~~~i~g~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      +++|++++ ..+++++++||+++||+.....        ++..++...... ...+.++.+....++++++|+++++..+
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~  235 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL  235 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence            99999997 4789999999999999853211        111122222111 1233345555678999999999999999


Q ss_pred             hcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc---ceeecC
Q 025908          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI---AGCWIS  244 (246)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~---~~~~~p  244 (246)
                      +..+...+++||+++++++++.|+++.+.+.+|.+.   ....+|
T Consensus       236 ~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p  280 (657)
T PRK07201        236 MHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLP  280 (657)
T ss_pred             hcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCC
Confidence            876656678999999999999999999999999876   444444

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=4.6e-28  Score=188.17  Aligned_cols=233  Identities=20%  Similarity=0.288  Sum_probs=182.6

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCcc--ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      |||+||+|++|++.|++.+  .+|++++..+...  ......       .....++...+|+.+...+.+++.  ++ .|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~-------~~~~~v~~~~~D~~~~~~i~~a~~--~~-~V   79 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTG-------FRSGRVTVILGDLLDANSISNAFQ--GA-VV   79 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhc-------ccCCceeEEecchhhhhhhhhhcc--Cc-eE
Confidence            7999999999999999998  7999998877531  111110       014789999999999999999998  88 66


Q ss_pred             EecCCC----------------CccchHHHHHhCC--CCceEEEEeecceeccCCC-CCCCCCCCCC--CCCcc-ccHHH
Q 025908           77 YDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHCETDTVD--PKSRH-KGKLN  134 (246)
Q Consensus        77 i~~~~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~--~~~~~-~~k~~  134 (246)
                      +|+++.                |+.++.+++++|.  +++++||+||.+|...... ...+|+.|..  ..++| .+|..
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            766553                5668999999998  9999999999999765544 3334444432  22356 99999


Q ss_pred             HHHHHHhcC----CceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh-----cC
Q 025908          135 TESVLESKG----VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-----GN  205 (246)
Q Consensus       135 ~e~~~~~~~----~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~-----~~  205 (246)
                      +|+++++.+    +..+.+||+.||||++. ...+.+...+..+..+...++.+...++++.+.++.+.+.+.     ..
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~-~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~  238 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPGDK-RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS  238 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCCCc-cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC
Confidence            999987543    78999999999999863 345667777888887777788888999999999888777654     23


Q ss_pred             CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcc-eeecC
Q 025908          206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCIA-GCWIS  244 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~-~~~~p  244 (246)
                      +...|+.|+|++++++...+++..+.+.+|...+ ...+|
T Consensus       239 ~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p  278 (361)
T KOG1430|consen  239 PSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLP  278 (361)
T ss_pred             CccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecc
Confidence            4568999999999999999999999999999877 44444

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=3.6e-28  Score=195.17  Aligned_cols=233  Identities=19%  Similarity=0.223  Sum_probs=163.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchh-hhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE-FAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+||||+++++.|+++|++|++++|+...... +....... ......++.++.+|++|.+.+.++++  ++|+|||+
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~hl  135 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVFHT  135 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEEec
Confidence            7999999999999999999999998887543111 10000000 00001357889999999999999998  89999999


Q ss_pred             CCCC----------------ccchHHHHHhCC---CCceEEEEeec--ceeccC--CC--CCCCCCC------CCCCCCc
Q 025908           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TVDPKSR  128 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~---~~~~~i~~Ss~--~v~~~~--~~--~~~~e~~------~~~~~~~  128 (246)
                      ++..                ..++.+++++|.   ++++||++||.  .+|+..  ..  ..++|+.      +..|.+.
T Consensus       136 A~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~  215 (367)
T PLN02686        136 SAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW  215 (367)
T ss_pred             CeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccch
Confidence            7641                123677899875   58999999996  467631  11  2244442      2334445


Q ss_pred             c-ccHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          129 H-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       129 ~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      | .+|..+|++++    +.+++++++||+++|||+........++ ....+. +.+++++  ..+++|++|++++++.++
T Consensus       216 Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g--~~~~v~V~Dva~A~~~al  291 (367)
T PLN02686        216 YALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADG--LLATADVERLAEAHVCVY  291 (367)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCC--CcCeEEHHHHHHHHHHHH
Confidence            6 99999999874    4689999999999999974322111222 333443 4444544  357999999999999999


Q ss_pred             cCC--CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCccee
Q 025908          204 GNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGC  241 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~  241 (246)
                      +..  ...+++| +++++.+++.|+++.+.+.+|.+....
T Consensus       292 ~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~  330 (367)
T PLN02686        292 EAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKI  330 (367)
T ss_pred             hccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcC
Confidence            742  2345678 778889999999999999999765543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.96  E-value=3.9e-28  Score=189.30  Aligned_cols=208  Identities=20%  Similarity=0.257  Sum_probs=160.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CC-ccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~-~d~   75 (246)
                      |||||++|+++++.|+++|++|++++|++++..              ..+++.+.+|+.|++.+..+++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            799999999999999999999999999987521              24677788999999999999831    26 999


Q ss_pred             EEecCCCCc---cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhc-CCceEEe
Q 025908           76 VYDINGREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL  149 (246)
Q Consensus        76 vi~~~~~~~---~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~-~~~~~il  149 (246)
                      |+++++...   ....+++++++  ++++||++|+..++..                 ...+...|+++++. +++++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~~l~~~~gi~~til  133 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHAHLDSLGGVEYTVL  133 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHHHHHhccCCCEEEE
Confidence            999987532   34667888876  8999999998655211                 01244567788775 9999999


Q ss_pred             ecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHH
Q 025908          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (246)
Q Consensus       150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~  229 (246)
                      ||++++++....    .....+.+...+. .+.++.++++|+++|+|++++.++.++...++.|++.+++.+|+.|+++.
T Consensus       134 Rp~~f~~~~~~~----~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~  208 (285)
T TIGR03649       134 RPTWFMENFSEE----FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI  208 (285)
T ss_pred             eccHHhhhhccc----ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence            999888653110    1112222323332 34466789999999999999999988766678999999999999999999


Q ss_pred             HHHHhCCCcceeecC
Q 025908          230 CAKVTGYCIAGCWIS  244 (246)
Q Consensus       230 ~~~~~g~~~~~~~~p  244 (246)
                      +.+.+|++++...+|
T Consensus       209 l~~~~g~~v~~~~~~  223 (285)
T TIGR03649       209 LSRVLGRKITHVKLT  223 (285)
T ss_pred             HHHHhCCceEEEeCC
Confidence            999999998877665

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=1.4e-27  Score=197.41  Aligned_cols=235  Identities=14%  Similarity=0.138  Sum_probs=167.8

Q ss_pred             CCccccchHHHHHHHHHCC---CeEEEEecCCCcccc--CCC-CC----Cchhhh---------hhcCceEEEEccCC--
Q 025908            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP-GE----SDQEFA---------EFSSKILHLKGDRK--   59 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~--~~~-~~----~~~~~~---------~~~~~v~~~~~D~~--   59 (246)
                      ||||||+|++|++.|++.+   .+|+++.|..+....  .+. ..    .-..+.         ....+++++.+|+.  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            7999999999999999864   378999997754211  000 00    000000         01267999999998  


Q ss_pred             -----CHHHHHHhhhcCCccEEEecCCC-------------CccchHHHHHhCC---CCceEEEEeecceeccCCC----
Q 025908           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----  114 (246)
Q Consensus        60 -----~~~~~~~~~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~----  114 (246)
                           +.+.+..+++  ++|+|||+|+.             |+.++.+++++|+   ++++||++||.++||...+    
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4455677777  89999999985             2335778888865   5789999999999986321    


Q ss_pred             CCCCCCC------------------------------------------------CCCCCCccccHHHHHHHHHh--cCC
Q 025908          115 LPHCETD------------------------------------------------TVDPKSRHKGKLNTESVLES--KGV  144 (246)
Q Consensus       115 ~~~~e~~------------------------------------------------~~~~~~~~~~k~~~e~~~~~--~~~  144 (246)
                      .++....                                                ...|..|..+|+.+|+++++  .++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence            1111000                                                01234455999999999975  479


Q ss_pred             ceEEeecceeeCCCCCC--chH------HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--C-CCCeeE
Q 025908          145 NWTSLRPVYIYGPLNYN--PVE------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K-ASRQVF  213 (246)
Q Consensus       145 ~~~ilR~~~i~g~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~-~~~~~~  213 (246)
                      +++++||+++|||....  .++      ..++..+..+....+++++++.+++|+++|++++++.++.+.  . ..+++|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999986422  222      233444456666667789999999999999999999988652  1 235799


Q ss_pred             EeeCC--eeecHHHHHHHHHHHhCCC
Q 025908          214 NISGE--KYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       214 ~~~~~--~~~s~~~l~~~~~~~~g~~  237 (246)
                      |++++  .++|+.++++.+.+.++..
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhhC
Confidence            99998  8899999999999988753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=2e-27  Score=190.56  Aligned_cols=225  Identities=18%  Similarity=0.229  Sum_probs=157.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||+++++.|+++|++|++++|+..+.......     .. ...+++++.+|+.+.+.+.++++  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK-----WK-EGDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh-----hc-cCCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999876542111100     00 02468899999999999999997  899999999


Q ss_pred             CCCc-----------------------cchHHHHHhCC---CCceEEEEeecceeccCC-----CCCCCCCCC--C----
Q 025908           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCETDT--V----  123 (246)
Q Consensus        81 ~~~~-----------------------~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~-----~~~~~e~~~--~----  123 (246)
                      +...                       .++.+++++|.   ++++||++||..+||...     ..+++|+.+  .    
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            7521                       12456778765   378999999999998432     134556521  1    


Q ss_pred             ---CCCCcc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCCCc---hHHHHHHHHHhCCC--cccCCC---CCcee
Q 025908          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRP--IPIPGS---GIQVT  187 (246)
Q Consensus       124 ---~~~~~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~---~~~~~~~~~~~~~~--~~~~~~---~~~~~  187 (246)
                         .+...| .+|..+|+++.    +.+++++++||+++|||+....   ++..+...+ .+..  ....+.   ....+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPI-TGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHh-cCCccccccccccccccCce
Confidence               122245 99999999764    4689999999999999975322   222222211 2322  111111   11246


Q ss_pred             eeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +|||++|+|++++.+++.+.. ++.|++ +++++++.|+++.+.+.++.
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence            999999999999999976543 347754 56789999999999999873

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=2.7e-26  Score=185.19  Aligned_cols=235  Identities=19%  Similarity=0.217  Sum_probs=161.6

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccc--cCCCCCCch---hhhhhc-CceEEEEccCCCH------HHHHH
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA--QQLPGESDQ---EFAEFS-SKILHLKGDRKDY------DFVKS   66 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~--~~~~~~~~~---~~~~~~-~~v~~~~~D~~~~------~~~~~   66 (246)
                      ||||||+|++|++.|+++|  .+|++++|..+...  +.+......   ...... .+++++.+|++++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  67999999876310  000000000   000001 5799999998753      45666


Q ss_pred             hhhcCCccEEEecCCC-------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-----CCC
Q 025908           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK  126 (246)
Q Consensus        67 ~~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-----~~~  126 (246)
                      +.+  ++|+|||+++.             +..++.+++++|.  +.++|+++||.++|+.....+..++.+.     .+.
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            665  89999999874             2345677888876  6778999999999976433222333321     112


Q ss_pred             Ccc-ccHHHHHHHHHh---cCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          127 SRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~~---~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..| .+|+.+|.++++   .+++++++||+.++|+....     .++..++.........+  .......++++++|+++
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTEDLTPVDYVAR  240 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccCcccHHHHHH
Confidence            334 899999998854   48999999999999973221     22333333333333222  11123578999999999


Q ss_pred             HHHHHhcCCCC--CCeeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          198 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      +++.++..+..  .+++||+++++++++.|+++.+.+ +|.+++.
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~  284 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKL  284 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCc
Confidence            99999876543  268999999999999999999998 8877653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=7.9e-26  Score=178.99  Aligned_cols=208  Identities=17%  Similarity=0.240  Sum_probs=157.7

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+|+||+++++.|+++|  ++|++++|+...... +..    ..  ...++.++.+|+.|.+.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~----~~--~~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQQ----KF--PAPCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HHH----Hh--CCCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999887544211 000    00  01468899999999999999998  8999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +++...                .++.++++++.  ++++||++||...              ..|.+.| .+|..+|.++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF  146 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence            998531                24667888876  6789999998532              2233445 8999999877


Q ss_pred             H-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       140 ~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      +       ..+++++++||+++|||+.  .+++.+......+. .+++ +++.+.++|+|++|++++++.++++.. .++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence            4       3589999999999999863  35566666665565 4555 456778999999999999999998643 356


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +| ++.+..+++.|+++.+.+....
T Consensus       223 ~~-~~~~~~~sv~el~~~i~~~~~~  246 (324)
T TIGR03589       223 IF-VPKIPSMKITDLAEAMAPECPH  246 (324)
T ss_pred             EE-ccCCCcEEHHHHHHHHHhhCCe
Confidence            77 4555679999999999987543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=6.9e-26  Score=177.35  Aligned_cols=219  Identities=16%  Similarity=0.171  Sum_probs=155.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc--cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||+||+++++.|+++|++|++++|+..+..  ..+...     .....+++++.+|++|.+.+.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l-----~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGL-----SCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhc-----ccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999643311  000100     0002468899999999999999998  9999999


Q ss_pred             cCCCC--------------ccchHHHHHhCC---CCceEEEEeecceeccC-----CCCCCCCCCCCCCC------Ccc-
Q 025908           79 INGRE--------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH-  129 (246)
Q Consensus        79 ~~~~~--------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~~~~------~~~-  129 (246)
                      .++..              ..++.+++++|.   +++++|++||..++...     ...+.+|+.+..+.      ..| 
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            76432              235778888875   47899999998765311     23356665443222      135 


Q ss_pred             ccHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       130 ~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      .+|..+|+++.    +.+++++++||+++|||...... .     ...+.. ....+  ..+++||++|+|++++.++++
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-P-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-h-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhcC
Confidence            89999999873    46899999999999999743211 1     112221 12122  346799999999999999997


Q ss_pred             CCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          206 EKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +...+ .|.++++....+.++.+++.+.+..
T Consensus       236 ~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        236 VSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             cccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence            76544 7888887655578899999998763

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=7.5e-26  Score=194.35  Aligned_cols=187  Identities=25%  Similarity=0.348  Sum_probs=150.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||+|+++++.|+++|++|++++|+....   .           ..+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999874321   1           1468889999999999999998  899999999


Q ss_pred             CCC-------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeec
Q 025908           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (246)
Q Consensus        81 ~~~-------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~  151 (246)
                      +..       ..++.+++++|+  ++++||++||..                        |..+|+++++++++++++||
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp  125 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC  125 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence            763       335778888876  788999999742                        78899999999999999999


Q ss_pred             ceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHH
Q 025908          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (246)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~  231 (246)
                      +++|||+.     ..++..+.. ..+...+++...+++||++|+|+++..+++.+...+++||+++++.+|+.|+++.+.
T Consensus       126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~  199 (854)
T PRK05865        126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG  199 (854)
T ss_pred             ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence            99999952     222333222 222223444567899999999999999986554456799999999999999999988


Q ss_pred             HH
Q 025908          232 KV  233 (246)
Q Consensus       232 ~~  233 (246)
                      +.
T Consensus       200 ~~  201 (854)
T PRK05865        200 RP  201 (854)
T ss_pred             hh
Confidence            74

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=2.6e-25  Score=163.70  Aligned_cols=214  Identities=23%  Similarity=0.314  Sum_probs=174.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|||||+|+.++..|.+.|.+|++-.|..+.....+.-.-+      ...+-+...|+.|++++..+++  ..++|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd------LGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD------LGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc------ccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            69999999999999999999999999987654333321111      3578889999999999999998  999999998


Q ss_pred             CCC------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCce
Q 025908           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNW  146 (246)
Q Consensus        81 ~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~  146 (246)
                      |..            ....+.+...|+  ++.+||++|+.++            +-..+.-+-++|.+.|..+++.-.+.
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga------------nv~s~Sr~LrsK~~gE~aVrdafPeA  206 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA------------NVKSPSRMLRSKAAGEEAVRDAFPEA  206 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc------------cccChHHHHHhhhhhHHHHHhhCCcc
Confidence            863            345778888888  9999999998664            11122223389999999999988899


Q ss_pred             EEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCC-ceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHH
Q 025908          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (246)
Q Consensus       147 ~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  225 (246)
                      +|+||+.+||..  ..+++.+...+++-..+++++.+. ..-.+|++-|+|++++.+++++...|++|.+++|+.+...|
T Consensus       207 tIirPa~iyG~e--Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~e  284 (391)
T KOG2865|consen  207 TIIRPADIYGTE--DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSE  284 (391)
T ss_pred             eeechhhhcccc--hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHH
Confidence            999999999974  345666666676667778876664 46789999999999999999998899999999999999999


Q ss_pred             HHHHHHHHhCC
Q 025908          226 LARACAKVTGY  236 (246)
Q Consensus       226 l~~~~~~~~g~  236 (246)
                      |++.+-+..-.
T Consensus       285 Lvd~my~~~~~  295 (391)
T KOG2865|consen  285 LVDIMYDMARE  295 (391)
T ss_pred             HHHHHHHHHhh
Confidence            99998776543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=8.2e-27  Score=176.28  Aligned_cols=215  Identities=19%  Similarity=0.289  Sum_probs=155.9

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCce----EEEEccCCCHHHHHHhhhcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI----LHLKGDRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~D~~~~~~~~~~~~~~~~d~   75 (246)
                      |||+|.||+.|+++|++.+ .++++++|+..+......+ .....  ...++    ..+.+|+.|.+.+..++++.++|+
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~-l~~~~--~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERE-LRSRF--PDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHH-CHHHC----TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHH-Hhhcc--cccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999987 5899999997764211110 00000  01233    346899999999999999889999


Q ss_pred             EEecCCC----------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHH
Q 025908           76 VYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        76 vi~~~~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      |||+|+.                |+.++++++++|.  ++++||++||.-+              .+|.+-+ .+|+.+|
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrlaE  146 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRLAE  146 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHHHH
Confidence            9999997                3457999999976  8999999998554              3456666 9999999


Q ss_pred             HHHHhc-------CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          137 SVLESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       137 ~~~~~~-------~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +++...       +..++++|+|+|+|..  .+.++.|..+++++.++++ .+++..+.|++++++++.++.+..... .
T Consensus       147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~--GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~-~  222 (293)
T PF02719_consen  147 KLVQAANQYSGNSDTKFSSVRFGNVLGSR--GSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK-G  222 (293)
T ss_dssp             HHHHHHCCTSSSS--EEEEEEE-EETTGT--TSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH---T
T ss_pred             HHHHHHhhhCCCCCcEEEEEEecceecCC--CcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC-C
Confidence            998542       3688999999999973  5678899999999999888 456788999999999999999987654 5


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      |++|.+..|++++..|+++.+.+..|.
T Consensus       223 geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  223 GEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             TEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             CcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            789999999999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.93  E-value=2.7e-26  Score=173.78  Aligned_cols=215  Identities=22%  Similarity=0.340  Sum_probs=157.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +||||.+|+++++.|++.+++|++++|+.++.. ..+.          ..+++++.+|+.|.+++.++|+  ++|+||.+
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            699999999999999999999999999985421 1111          3688999999999999999998  99999998


Q ss_pred             CCCC----ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC-ccccHHHHHHHHHhcCCceEEeecc
Q 025908           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPV  152 (246)
Q Consensus        80 ~~~~----~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~~e~~~~~~~~~~~ilR~~  152 (246)
                      .+..    .....++++|++  ++++||+.|....+.        +.....|.. .+..|..+|+++++.+++++++|++
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g  143 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPG  143 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhccccceecccc
Confidence            8754    335678999987  999999766544421        112222222 3478999999999999999999999


Q ss_pred             eeeCCCCCCchHHHHHH--HHHhCC-CcccCCCCCceeeee-eHHHHHHHHHHHhcCCCCC--CeeEEeeCCeeecHHHH
Q 025908          153 YIYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGL  226 (246)
Q Consensus       153 ~i~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~l  226 (246)
                      .++...     ...+..  ...... .+.+.++++....++ +.+|+|+++..++.++...  ++.+.+.+ +.+|+.|+
T Consensus       144 ~f~e~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  144 FFMENL-----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEHHHH-----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             chhhhh-----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHH
Confidence            876541     110111  011111 245556666666675 9999999999999887543  56676666 78999999


Q ss_pred             HHHHHHHhCCCccee
Q 025908          227 ARACAKVTGYCIAGC  241 (246)
Q Consensus       227 ~~~~~~~~g~~~~~~  241 (246)
                      ++.+.+.+|++++.+
T Consensus       218 a~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  218 AAILSKVLGKKVKYV  232 (233)
T ss_dssp             HHHHHHHHTSEEEEE
T ss_pred             HHHHHHHHCCccEEe
Confidence            999999999987653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=5.3e-26  Score=166.05  Aligned_cols=175  Identities=31%  Similarity=0.465  Sum_probs=136.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||||++|+.++++|+++|++|++++|++.+...             ..+++++.+|+.|++.+.++++  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999887432             2799999999999999999998  999999999


Q ss_pred             CCCc---cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeecceee
Q 025908           81 GREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (246)
Q Consensus        81 ~~~~---~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~~~i~  155 (246)
                      +...   ...++++++|+  +++++|++|+.++|+....... ......+..++..|...|+.+++.+++|+++||+.+|
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~  147 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFS-DEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY  147 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEE-GGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCcccc-cccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence            7543   34667888876  8999999999999864333211 1111122234588889999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      |+.....             .+. ...+....++|+.+|+|++++.++++
T Consensus       148 ~~~~~~~-------------~~~-~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  148 GNPSRSY-------------RLI-KEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             BTTSSSE-------------EEE-SSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             eCCCcce-------------eEE-eccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9852211             011 11334556999999999999998864

...

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=3.4e-24  Score=167.50  Aligned_cols=197  Identities=15%  Similarity=0.144  Sum_probs=146.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||++|++.|+++|++|+...                             .|+.+.+.+...++..++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999999999987431                             1334556677777656899999999


Q ss_pred             CCCc-------------------cchHHHHHhCC--CCceEEEEeecceeccCC------CCCCCCCCCCC-CCCcc-cc
Q 025908           81 GREA-------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKSRH-KG  131 (246)
Q Consensus        81 ~~~~-------------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~------~~~~~e~~~~~-~~~~~-~~  131 (246)
                      +...                   .++.+++++|+  +++ ++++||..+|+...      ..+++|++++. |.+.| .+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            8531                   13667888887  664 66677778886432      22466665554 43556 99


Q ss_pred             HHHHHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       132 k~~~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      |..+|++++.+. +..++|+...++++..  ....++..+..+..+...+     .++++++|++++++.+++.+.  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999998753 6778999887876421  1234566666666543322     369999999999999997653  36


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +||+++++.+|+.|+++.+++.+|..
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            99999999999999999999999964

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=3.3e-24  Score=172.39  Aligned_cols=212  Identities=20%  Similarity=0.286  Sum_probs=176.8

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||+|.+|+.+++++++.+ .+++.++|++.+.....     .++..  ....+..+.||+.|.+.+..++++.++|+||
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~-----~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID-----MELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHH-----HHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            7999999999999999987 58999999887742110     00111  0367888999999999999999977799999


Q ss_pred             ecCCC----------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        78 ~~~~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      |+|+.                |+-+++|++++|.  ++++||.+||..+              .+|.+-+ .+|+.+|..
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~  396 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL  396 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence            99986                4458999999977  9999999997443              4566665 999999998


Q ss_pred             HHhc-------CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       139 ~~~~-------~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      +...       +-.++.+|+|+|.|..  .+.++.|...+.+|.++++ .+++..+.|++++|.++.++.+..... .|+
T Consensus       397 ~~a~~~~~~~~~T~f~~VRFGNVlGSr--GSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         397 FQAANRNVSGTGTRFCVVRFGNVLGSR--GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             HHHHhhccCCCCcEEEEEEecceecCC--CCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence            8532       3689999999999984  5678889999999999887 567788999999999999999987654 688


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      +|.+..|++++..|+++.+-+..|
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhC
Confidence            999999999999999999999997

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=9e-24  Score=161.70  Aligned_cols=207  Identities=17%  Similarity=0.143  Sum_probs=146.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhh-hcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~-~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++|++|++++|+.++....+..         ..+++++.+|+.+ .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            69999999999999999999999999987663222221         2468999999988 46676776 4  8999999


Q ss_pred             cCCCCcc------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCC-CCCCCc-cccHHHHHHHHHhc
Q 025908           79 INGREAD------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSR-HKGKLNTESVLESK  142 (246)
Q Consensus        79 ~~~~~~~------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~~~~~-~~~k~~~e~~~~~~  142 (246)
                      +++....            +..++++++.  +++++|++||.++|+.....+..+... ..+... +..|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            9876321            3577888876  788999999999987543322211100 011112 25688899999999


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC---e
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE---K  219 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~---~  219 (246)
                      +++++++||++++++....             .......+ .....+|+.+|+|++++.++..+...+.++.+.+.   .
T Consensus       172 gi~~~iirpg~~~~~~~~~-------------~~~~~~~~-~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTG-------------NIVMEPED-TLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCc-------------eEEECCCC-ccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            9999999999999863211             10001111 11235799999999999999887656677888762   2


Q ss_pred             eecHHHHHHHHHH
Q 025908          220 YVTFDGLARACAK  232 (246)
Q Consensus       220 ~~s~~~l~~~~~~  232 (246)
                      ..++.++...+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            3788888877654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=4.9e-23  Score=151.68  Aligned_cols=236  Identities=19%  Similarity=0.174  Sum_probs=182.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||-||+-|.+|++.|++.||+|+++.|+.+.....-......... ....+.+..+|++|...+..++++.+||-|+|++
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~-~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa   86 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHL-NDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA   86 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccccc-CCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence            799999999999999999999999999865532110000000000 0245889999999999999999999999999999


Q ss_pred             CCCc----------------cchHHHHHhCC--C--CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           81 GREA----------------DEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +...                .++.+++++++  +  ..||...||...||.....|.+|..|..|.++| .+|..+-...
T Consensus        87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089          87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence            8742                25889999987  2  579999999999999999999999999999998 8888876544


Q ss_pred             ----HhcCCceEEeecceeeCCCCCCchHH----HHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          140 ----ESKGVNWTSLRPVYIYGPLNYNPVEE----WFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       140 ----~~~~~~~~ilR~~~i~g~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                          ..+|+-.|.=+..+--+|.....+..    ..+.++..|.. --..|+-+.+++|=++.|.+++++.+++++.  +
T Consensus       167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P  244 (345)
T COG1089         167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P  244 (345)
T ss_pred             eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence                35777777655555555654433332    33444445543 2335888899999999999999999999876  4


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      ..|.++.++..|++|++++..+..|.+..
T Consensus       245 ddyViATg~t~sVrefv~~Af~~~g~~l~  273 (345)
T COG1089         245 DDYVIATGETHSVREFVELAFEMVGIDLE  273 (345)
T ss_pred             CceEEecCceeeHHHHHHHHHHHcCceEE
Confidence            79999999999999999999999996654

>PRK12320 hypothetical protein; Provisional

Probab=99.91  E-value=8.2e-23  Score=172.45  Aligned_cols=184  Identities=13%  Similarity=0.122  Sum_probs=139.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||++|++.|+++|++|++++|.....    .          ..+++++.+|+.++. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----L----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----c----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999865431    1          247889999999874 777777  899999999


Q ss_pred             CCC--------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEee
Q 025908           81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (246)
Q Consensus        81 ~~~--------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR  150 (246)
                      +..        ..++.+++++|+  ++ ++||+||.  +|...             .+    ...|.++..++++++++|
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~-------------~~----~~aE~ll~~~~~p~~ILR  128 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE-------------LY----RQAETLVSTGWAPSLVIR  128 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc-------------cc----cHHHHHHHhcCCCEEEEe
Confidence            854        234778899887  55 79999975  22110             01    147888888889999999


Q ss_pred             cceeeCCCCCCc---hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHH
Q 025908          151 PVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (246)
Q Consensus       151 ~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~  227 (246)
                      ++++|||.....   ++..++.....+          ..+.++|++|++++++.+++.+.  +++||+++++.+|+.|++
T Consensus       129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~  196 (699)
T PRK12320        129 IAPPVGRQLDWMVCRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAW  196 (699)
T ss_pred             CceecCCCCcccHhHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHH
Confidence            999999964321   222333222222          23456899999999999997643  359999999999999999


Q ss_pred             HHHHHH
Q 025908          228 RACAKV  233 (246)
Q Consensus       228 ~~~~~~  233 (246)
                      +++...
T Consensus       197 ~~i~~~  202 (699)
T PRK12320        197 RLLRSV  202 (699)
T ss_pred             HHHHHh
Confidence            888665

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.90  E-value=7.1e-24  Score=161.84  Aligned_cols=195  Identities=21%  Similarity=0.188  Sum_probs=112.1

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCcc--cc----CCCCCCchhhh---hhcCceEEEEccCCCH------HH
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI--AQ----QLPGESDQEFA---EFSSKILHLKGDRKDY------DF   63 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~--~~----~~~~~~~~~~~---~~~~~v~~~~~D~~~~------~~   63 (246)
                      ||||||+|++|+++|++.+.  +|++++|..+..  .+    .+.. ......   ....+++++.||++++      +.
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~-~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKE-YGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-S-S-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhccc-ccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            79999999999999999986  999999987551  11    1111 011101   1258999999999873      55


Q ss_pred             HHHhhhcCCccEEEecCCC-------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCC-------C-
Q 025908           64 VKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------T-  120 (246)
Q Consensus        64 ~~~~~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------~-  120 (246)
                      +..+.+  .+|+|||+|+.             |+.+++++++.|.  +.++|+|+||..+.+...+ ...+       . 
T Consensus        81 ~~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~  157 (249)
T PF07993_consen   81 YQELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDD  157 (249)
T ss_dssp             HHHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--E
T ss_pred             hhcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-ccccccccccccc
Confidence            666666  89999999886             3557899999977  5669999999555443332 1111       1 


Q ss_pred             --CC-CCCCCccccHHHHHHHHHh----cCCceEEeecceeeCCCC-----CCc-hHHHHHHHHHhCCCcccCCCCCcee
Q 025908          121 --DT-VDPKSRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNP-VEEWFFHRLKAGRPIPIPGSGIQVT  187 (246)
Q Consensus       121 --~~-~~~~~~~~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                        .. ..+..|..+|+.+|+++++    .|++++|+||+.++|...     ... ....+...+..+......++.....
T Consensus       158 ~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  237 (249)
T PF07993_consen  158 LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARL  237 (249)
T ss_dssp             EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT-
T ss_pred             chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceE
Confidence              11 1223334999999999864    389999999999999431     233 2333444444444444455555679


Q ss_pred             eeeeHHHHHHHH
Q 025908          188 QLGHVKDLARAF  199 (246)
Q Consensus       188 ~~i~~~D~a~~~  199 (246)
                      ++++++.+|++|
T Consensus       238 d~vPVD~va~aI  249 (249)
T PF07993_consen  238 DLVPVDYVARAI  249 (249)
T ss_dssp             -EEEHHHHHHHH
T ss_pred             eEECHHHHHhhC
Confidence            999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=2.1e-22  Score=168.18  Aligned_cols=232  Identities=17%  Similarity=0.158  Sum_probs=157.5

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccc--cCCC-CCCc----hhhhh---------hcCceEEEEccCCCH
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIA--QQLP-GESD----QEFAE---------FSSKILHLKGDRKDY   61 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~--~~~~-~~~~----~~~~~---------~~~~v~~~~~D~~~~   61 (246)
                      ||||||+|++|++.|++.+.   +|+++.|..+...  +.+. ....    ..+.+         ...++..+.+|+.++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   7899999765421  1110 0000    00000         035789999999986


Q ss_pred             ------HHHHHhhhcCCccEEEecCCCC-------------ccchHHHHHhCC---CCceEEEEeecceeccCCC----C
Q 025908           62 ------DFVKSSLSAKGFDVVYDINGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----L  115 (246)
Q Consensus        62 ------~~~~~~~~~~~~d~vi~~~~~~-------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~----~  115 (246)
                            +..+.+.+  ++|+|||+|+..             +.++.+++++|+   +.++||++||.++||...+    .
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~  282 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK  282 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence                  34455555  799999999862             335778888875   5689999999999986431    1


Q ss_pred             CCC-----------------------------------C---C-----------------CCCCCCCccccHHHHHHHHH
Q 025908          116 PHC-----------------------------------E---T-----------------DTVDPKSRHKGKLNTESVLE  140 (246)
Q Consensus       116 ~~~-----------------------------------e---~-----------------~~~~~~~~~~~k~~~e~~~~  140 (246)
                      ++.                                   +   .                 ....|..|..+|..+|++++
T Consensus       283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~  362 (605)
T PLN02503        283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVIN  362 (605)
T ss_pred             ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHH
Confidence            111                                   0   0                 01123444489999999997


Q ss_pred             h--cCCceEEeecceeeC----------CCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC-C-
Q 025908          141 S--KGVNWTSLRPVYIYG----------PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E-  206 (246)
Q Consensus       141 ~--~~~~~~ilR~~~i~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~-  206 (246)
                      +  .+++++|+||+.|.+          ++.. ...+ .+.....|..-.++++++...+.|+++.++++++.++.. . 
T Consensus       363 ~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~-~~~p-~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~  440 (605)
T PLN02503        363 SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNR-MMDP-IVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG  440 (605)
T ss_pred             HhcCCCCEEEEcCCEecccccCCccccccCcc-ccch-hhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc
Confidence            5  479999999999944          3211 1111 112222444333568888999999999999999988421 1 


Q ss_pred             --CCCCeeEEeeCC--eeecHHHHHHHHHHHhCC
Q 025908          207 --KASRQVFNISGE--KYVTFDGLARACAKVTGY  236 (246)
Q Consensus       207 --~~~~~~~~~~~~--~~~s~~~l~~~~~~~~g~  236 (246)
                        ...+++||++++  +++++.++.+.+.+.+..
T Consensus       441 ~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        441 AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence              124689999988  899999999999887654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=2.2e-22  Score=143.49  Aligned_cols=216  Identities=19%  Similarity=0.295  Sum_probs=165.3

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|++|.+.+...+.  +=.++..+                         -.+|+++..+.+.+++++++.+|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------------ccccccchHHHHHHHhccCCceeee
Confidence            69999999999999998875  33333222                         1358899999999999999999999


Q ss_pred             cCCC-----------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC----CCCCCCc-c-ccHH
Q 025908           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL  133 (246)
Q Consensus        79 ~~~~-----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~  133 (246)
                      +|+.                 +..-..|++..|.  ++++++++.|..+|.+....|++|+.    |+.|.++ | .+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9864                 1223456777765  89999999999999999888998875    5566665 3 5675


Q ss_pred             HHHH----HHHhcCCceEEeecceeeCCCCC-----CchHHHHHHHH----HhCC-CcccCCCCCceeeeeeHHHHHHHH
Q 025908          134 NTES----VLESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRL----KAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       134 ~~e~----~~~~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .+.-    +..++|..++.+-|+++|||.+.     ...++.++.+.    .++. .+.++|.+...++|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            5543    33568999999999999999742     23455555444    2333 678899999999999999999999


Q ss_pred             HHHhcCCCCCCeeEEeeCCe--eecHHHHHHHHHHHhCCCcceee
Q 025908          200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~--~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      ++++++-+. -+-.+++.++  .+|++|+++++.++.+..-++.+
T Consensus       222 i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~  265 (315)
T KOG1431|consen  222 IWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVW  265 (315)
T ss_pred             HHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCCceEEe
Confidence            999986542 2455666665  89999999999999987765543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.87  E-value=7.4e-21  Score=146.63  Aligned_cols=229  Identities=14%  Similarity=0.101  Sum_probs=146.5

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccc------cCCCCCCchhhhhhcCceEEEEccCCC------HHHHHHh
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA------QQLPGESDQEFAEFSSKILHLKGDRKD------YDFVKSS   67 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~D~~~------~~~~~~~   67 (246)
                      ||||||+|++|+.+|+.+- .+|++++|..+...      +.+. .....-+.+..+++++.+|+..      ...+..+
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~-~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~L   84 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFD-LYRHWDELSADRVEVVAGDLAEPDLGLSERTWQEL   84 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhh-hhhhhhhhhcceEEEEecccccccCCCCHHHHHHH
Confidence            8999999999999999875 59999999987411      1111 0000011235899999999984      4667777


Q ss_pred             hhcCCccEEEecCCC-------------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCC--C--CC------
Q 025908           68 LSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--T--DT------  122 (246)
Q Consensus        68 ~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e--~--~~------  122 (246)
                      -+  .+|.|||+++.             |+.++..+++.|.  +.|.|+|+||.+++........++  +  ++      
T Consensus        85 a~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~  162 (382)
T COG3320          85 AE--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQ  162 (382)
T ss_pred             hh--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccC
Confidence            76  89999999874             5678999999876  688899999999986432211111  1  11      


Q ss_pred             CCCCCccccHHHHHHHHHh---cCCceEEeecceeeCCCC-----CCchHHHHHHHHHhCCCcccC--------CCCCce
Q 025908          123 VDPKSRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIP--------GSGIQV  186 (246)
Q Consensus       123 ~~~~~~~~~k~~~e~~~~~---~~~~~~ilR~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  186 (246)
                      ..+..|..||+.+|.++++   .|++++|+||+.+.|+..     ...++.+++..+.+...++-.        .+....
T Consensus       163 ~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~~v~~  242 (382)
T COG3320         163 GLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVDHVAR  242 (382)
T ss_pred             ccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhCccceeeE
Confidence            1123345999999999974   589999999999999764     233444555444443333211        111111


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCCCCeeEE-eeCCeeecHHHHHHHHHH
Q 025908          187 TQLGHVKDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK  232 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~l~~~~~~  232 (246)
                      ..-....-+++++..+..++...-..|+ ..-|..+...++.+.+.+
T Consensus       243 ~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         243 AVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             EeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            2222233344444444433332223444 233677889999888877

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.87  E-value=8.4e-21  Score=176.11  Aligned_cols=234  Identities=18%  Similarity=0.175  Sum_probs=158.8

Q ss_pred             CCccccchHHHHHHHHHCC----CeEEEEecCCCcccc--CCCCC---CchhhhhhcCceEEEEccCCC------HHHHH
Q 025908            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQ--QLPGE---SDQEFAEFSSKILHLKGDRKD------YDFVK   65 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~--~~~~~---~~~~~~~~~~~v~~~~~D~~~------~~~~~   65 (246)
                      ||||||+|.++++.|++++    ++|+++.|.......  .+...   ..........+++++.+|+.+      .+.+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence            7999999999999999887    799999997654211  00000   000000112478999999974      45566


Q ss_pred             HhhhcCCccEEEecCCC-------------CccchHHHHHhCC--CCceEEEEeecceeccCC------------CCCCC
Q 025908           66 SSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLPHC  118 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~------------~~~~~  118 (246)
                      ++..  ++|+|||+++.             ++.++.+++++|.  ++++|+|+||.++|+...            .....
T Consensus      1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443      1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred             HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence            6665  89999999875             2345778888876  678999999999986321            11123


Q ss_pred             CCCC-----CCCCC-ccccHHHHHHHHHh---cCCceEEeecceeeCCCCCCc-----hHHHHHHHHHhCCCcccCCCCC
Q 025908          119 ETDT-----VDPKS-RHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGI  184 (246)
Q Consensus       119 e~~~-----~~~~~-~~~~k~~~e~~~~~---~~~~~~ilR~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                      |..+     ..+.+ |..+|+.+|.++..   .+++++++||+.+||+.....     ++..++.......   ...+..
T Consensus      1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~---~~p~~~ 1211 (1389)
T TIGR03443      1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG---LIPNIN 1211 (1389)
T ss_pred             cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC---CcCCCC
Confidence            3322     11223 44999999998853   589999999999999864321     2222332222222   223344


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCC--CCCeeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      ..+++++++|++++++.++.++.  ....+||++++..+++.++++.+.+ .|.+.+.
T Consensus      1212 ~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~~ 1268 (1389)
T TIGR03443      1212 NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVEI 1268 (1389)
T ss_pred             CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCCc
Confidence            56899999999999999987653  2345899999989999999999976 4655443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=1.1e-20  Score=163.26  Aligned_cols=194  Identities=17%  Similarity=0.180  Sum_probs=141.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||++|++.|.++|++|...                             .+|++|.+.+...++..++|+|||+|
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999887311                             12467788888888877899999999


Q ss_pred             CCC-------------------ccchHHHHHhCC--CCceEEEEeecceeccC------CCCCCCCCCCCCCC-Ccc-cc
Q 025908           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-SRH-KG  131 (246)
Q Consensus        81 ~~~-------------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~------~~~~~~e~~~~~~~-~~~-~~  131 (246)
                      +..                   ..++.+++++|+  ++ +++++||.++|+..      ...+++|++++.|. +.| .+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            753                   124677888887  66 57788888998642      23467777665543 555 99


Q ss_pred             HHHHHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       132 k~~~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      |..+|++++.+ .++.++|+.++|+.....  ...++..+.+... +.++      .+..+++|++.+++.+++..  .+
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~--~~  584 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN--LR  584 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhC--CC
Confidence            99999999876 478889999999743211  1123333333332 2221      34677888888888888643  25


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      ++||++++..+|+.|+++.+.+.++
T Consensus       585 giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        585 GIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             ceEEecCCCcCcHHHHHHHHHHhcC
Confidence            7999999999999999999999874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=2e-20  Score=153.84  Aligned_cols=214  Identities=17%  Similarity=0.150  Sum_probs=141.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchh---hh-hhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE---FA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~---~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      |||+|+||+++++.|+++|++|++++|+..+............   .. ....++.++.+|+.+.+.+.+++.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            6999999999999999999999999998766321110000000   00 001358899999999999999997  89999


Q ss_pred             EecCCCCc--------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC-ccccHHHHHHHH
Q 025908           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVL  139 (246)
Q Consensus        77 i~~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~~e~~~  139 (246)
                      ||++|...              .++.+++++|.  ++++||++||.+++...  .+  .. ...... ++..|..+|+.+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p--~~-~~~sk~~~~~~KraaE~~L  238 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FP--AA-ILNLFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--cc--cc-chhhHHHHHHHHHHHHHHH
Confidence            99987632              24677888876  78999999998763111  00  00 111111 236788999999


Q ss_pred             HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCeeEEeeCC
Q 025908          140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE  218 (246)
Q Consensus       140 ~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~~~  218 (246)
                      +++|++|++|||++++++.+....         .+. +............+..+|+|++++.++.++. ..+++|.+.++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~~---------t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYKE---------THN-LTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             HHcCCCEEEEECCeecCCcccccc---------ccc-eeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            999999999999999887422100         000 1111111111235789999999999998653 56789999886


Q ss_pred             eeecHHHHHHHHH
Q 025908          219 KYVTFDGLARACA  231 (246)
Q Consensus       219 ~~~s~~~l~~~~~  231 (246)
                      .......+.+++.
T Consensus       309 ~~~p~~~~~~~~~  321 (576)
T PLN03209        309 TTAPLTPMEELLA  321 (576)
T ss_pred             CCCCCCCHHHHHH
Confidence            5333333333343

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.7e-19  Score=140.00  Aligned_cols=211  Identities=23%  Similarity=0.251  Sum_probs=160.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|++......            ..++++..+|+.++..+..+++  +.+.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~------------~~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL------------AGGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh------------cCCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            69999999999999999999999999998874321            1589999999999999999998  999999887


Q ss_pred             CCCc-------cchH---HHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEe
Q 025908           81 GREA-------DEVE---PILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (246)
Q Consensus        81 ~~~~-------~~~~---~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~il  149 (246)
                      +...       ....   +..+++. +.++++++|...+            ....+..+..+|...|..+...+++++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~------------~~~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGA------------DAASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCC------------CCCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            7432       1222   2333343 5788888886554            12233445589999999999999999999


Q ss_pred             ecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHH
Q 025908          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (246)
Q Consensus       150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~  229 (246)
                      |+..+|......  .  .......+.+......  ...+++..+|++.++...+..+...+++|.+++++..+..++.+.
T Consensus       140 r~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~  213 (275)
T COG0702         140 RRAAFYLGAGAA--F--IEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG  213 (275)
T ss_pred             ecCeeeeccchh--H--HHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence            977766643211  1  2222233333333333  378999999999999999988777789999999999999999999


Q ss_pred             HHHHhCCCcceeec
Q 025908          230 CAKVTGYCIAGCWI  243 (246)
Q Consensus       230 ~~~~~g~~~~~~~~  243 (246)
                      +.+..|++......
T Consensus       214 l~~~~gr~~~~~~~  227 (275)
T COG0702         214 LDYTIGRPVGLIPE  227 (275)
T ss_pred             HHHHhCCcceeeCC
Confidence            99999998776443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.82  E-value=5.9e-19  Score=122.18  Aligned_cols=191  Identities=21%  Similarity=0.284  Sum_probs=140.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||||.+|+.|+++++++||+|++++|++++...             ..++.+++.|+.|++++.+.+.  +.|+||..-
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------------~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------------RQGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------------cccceeecccccChhhhHhhhc--CCceEEEec
Confidence            5999999999999999999999999999988422             2578899999999999999998  999999887


Q ss_pred             CCCccc--------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHH--HHHH-hcCCce
Q 025908           81 GREADE--------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE--SVLE-SKGVNW  146 (246)
Q Consensus        81 ~~~~~~--------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e--~~~~-~~~~~~  146 (246)
                      +.....        ...+++.++  ++.|++.++..+-.--..+ ..-.+.|..|..|+ .++..+|  ..++ +.+++|
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W  149 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW  149 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence            665222        334667666  7899998886554321111 22345566677777 6777776  3454 356999


Q ss_pred             EEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEee
Q 025908          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (246)
Q Consensus       147 ~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~  216 (246)
                      +.+-|+.+|-|+...+.+.       .++...+. +. .-.+.|+..|.|-+++..++++.+.++.|-+.
T Consensus       150 TfvSPaa~f~PGerTg~yr-------lggD~ll~-n~-~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         150 TFVSPAAFFEPGERTGNYR-------LGGDQLLV-NA-KGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EEeCcHHhcCCccccCceE-------eccceEEE-cC-CCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            9999999999976543211       22222222 21 23589999999999999999998887777653

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=134.94  Aligned_cols=206  Identities=16%  Similarity=0.168  Sum_probs=138.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+.........        ....++.++.+|++|.+++.+++++     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--------RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211100        0124688999999999888877653     35899


Q ss_pred             EEecCCCCc--------------------cchHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|...                    .++.++++++    +  +..++|++||......           ..+...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  148 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGFSLY  148 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCCchh
Confidence            999998632                    1233455553    3  5679999998654211           1123345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeeccee---eCCCCCC--------chHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i---~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                       .+|...|.+++       ..+++++++||+.+   ||++...        ......+........+.+         +.
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  219 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PG  219 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CC
Confidence             89998887653       25899999999987   5543110        001111112212222211         34


Q ss_pred             eHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      +++|++++++.++..+.. +..|++++++..+..++++.+.+.++
T Consensus       220 d~~~~~~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        220 DPQKMVQAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CHHHHHHHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHH
Confidence            689999999999976543 46799999988888888887777665

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.79  E-value=3.1e-18  Score=124.18  Aligned_cols=236  Identities=17%  Similarity=0.164  Sum_probs=169.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||-||.=|+.|++.|+.+||+|.++.|+.+.... .+......+............+|++|...+.+++....++-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            6899999999999999999999999998766311 111000011111135688889999999999999998899999999


Q ss_pred             CCCCc----------------cchHHHHHhC---C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGREA----------------DEVEPILDAL---P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~---~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      ++...                .++.++++|.   .  ..-+|-..||...||.....|..|..|..|.+.| .+|...-.
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            88632                3677888874   3  3458999999999999888999999999999988 77776644


Q ss_pred             HH----HhcCCceEEeecceeeCCCCCCchHHHHHH----HHHhCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH----RLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~----~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      ++    ..+++-.|.=-..+--.|....++..+-+.    ++..++ .....|+....++|-|+.|.+++++.+++++.+
T Consensus       194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P  273 (376)
T KOG1372|consen  194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP  273 (376)
T ss_pred             EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC
Confidence            33    345544433222222234444444443332    222232 222347778899999999999999999988753


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                        ..|.+..++..|.+||.+.-....|..+
T Consensus       274 --dDfViATge~hsVrEF~~~aF~~ig~~l  301 (376)
T KOG1372|consen  274 --DDFVIATGEQHSVREFCNLAFAEIGEVL  301 (376)
T ss_pred             --CceEEecCCcccHHHHHHHHHHhhCcEE
Confidence              5889999999999999999887777543

>PRK09135 pteridine reductase; Provisional

Probab=99.78  E-value=1.3e-17  Score=127.56  Aligned_cols=198  Identities=20%  Similarity=0.204  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|++|+++++.|+++|++|++++|+.......+.    ..... ....+.++.+|+++.+++..+++.     .++|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987533211110    00000 024588899999999998888864     2689


Q ss_pred             EEEecCCCC--------------------ccchHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~~~~~--------------------~~~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +|||+++..                    ..++.++++++.     ....++.+++..           +..+..+...|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Y  156 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGYPVY  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCchhH
Confidence            999999852                    123445555542     223455544322           22344455556


Q ss_pred             -ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 -~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                       .+|..+|.+++.      .+++++.+||+.+++|.....+............++..         +.+++|+|+++..+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~  227 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR---------IGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC---------CcCHHHHHHHHHHH
Confidence             899999987742      26899999999999987533222222222222222211         12479999999766


Q ss_pred             hcC-CCCCCeeEEeeCCeeec
Q 025908          203 LGN-EKASRQVFNISGEKYVT  222 (246)
Q Consensus       203 ~~~-~~~~~~~~~~~~~~~~s  222 (246)
                      +.. +...+++|++++++.++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            643 34468899999988654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.1e-17  Score=127.97  Aligned_cols=196  Identities=18%  Similarity=0.207  Sum_probs=130.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||||++|+++++.|+++|++|+++.|........+.    ........++.++.+|+.+++.+.+++++     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887654211111    00011135688999999999988888764     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +..++++++    +  +.+++|++||...+...           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----------~~~~~y  156 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----------PGRSNY  156 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------CCchHH
Confidence            9999985311                    122233332    3  67899999998775221           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       +.+++++++||+.++++.............   ....       ....+++++|+++++.+
T Consensus       157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAET-------PLGRSGTPEDIARAVAF  226 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccC-------CCCCCcCHHHHHHHHHH
Confidence             78877776552       368999999999999986322211111111   0011       11238899999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCeee
Q 025908          202 VLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++.++  ...+++|+++++..+
T Consensus       227 ~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        227 LCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HhCccccCcCCCEEEeCCCEee
Confidence            99664  346899999998654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.77  E-value=9e-18  Score=129.47  Aligned_cols=203  Identities=15%  Similarity=0.096  Sum_probs=132.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|++.+..+...     ........+.++.+|+++.+.+.+++++     .++|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVAD-----EINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-----HHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754321111     0111124577899999999988877763     24899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhC-C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +    ++.+++++ +  +.+++|++||...+..           ..+...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  156 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----------SPLKSA  156 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----------CCCCcc
Confidence            9999986321                    1    44566666 4  5789999998655321           112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH---hCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+++       ..+++++++||+.+++|..... .........   ......++..+.....+++++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ-IPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh-hHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            4 78888776653       2579999999999999842111 111000000   0000011122334567999999999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCCee
Q 025908          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      +++.++..+.  ..++.|+++++..
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCcee
Confidence            9999997543  2478898888754

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=128.36  Aligned_cols=199  Identities=16%  Similarity=0.172  Sum_probs=131.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|++.+......     .......++.++.+|+.+++++.++++.     .++|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAE-----ALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321111     1111135688999999999988887763     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +    .+.++.+++  +.++||++||...+.+           ..+...|
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  153 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------SAGKAAY  153 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCcchh
Confidence            9999975211                    1    334445544  5789999998765422           1122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhC--CCc-----ccCCCCCceeeeeeHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPI-----PIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~i~~~D  194 (246)
                       .+|...+.+.+       ..+++++.+||+.+++|.....     +......  ...     ..+........+++++|
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence             77777775543       3579999999999998742111     1111000  000     01112223357999999


Q ss_pred             HHHHHHHHhcCCC--CCCeeEEeeCCee
Q 025908          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      +|++++.++....  ..++.|++.++..
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCCCEe
Confidence            9999999986532  3578899988743

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.76  E-value=4.5e-17  Score=125.08  Aligned_cols=199  Identities=19%  Similarity=0.222  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+..+......     .......++.++.+|+.+.+++..++++     .++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAK-----VATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211110     0001124688899999999877666542     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +    ++.+++.++  +.+++|++||...+....           ....|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~y  150 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------FKSAY  150 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------CCchh
Confidence            9999976321                    1    112233333  567999999876543211           11234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcc-------cCCCCCceeeeeeHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKD  194 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D  194 (246)
                       .+|...+.+.+       ..+++++++||+.++++..     ...+..........       ...+......+++++|
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV-----EKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH-----HHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence             77877776553       2489999999999998741     11111110111110       0112334467999999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|++++.++.++  ...++.|++.++..
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCccc
Confidence            999999999764  23578899988754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=125.88  Aligned_cols=202  Identities=19%  Similarity=0.231  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.......+.    ........++.++.+|+++++++.+++++     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999987543111110    01111124578899999999988877753     26899


Q ss_pred             EEecCCCCc--------------cchHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHH
Q 025908           76 VYDINGREA--------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        76 vi~~~~~~~--------------~~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      |||+++...              .+..++++++.    ...++|++||........    .+..+  ....| .+|..+|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~--~~~~Y~~sK~a~e  161 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTMP--EYEPVARSKRAGE  161 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCCc--cccHHHHHHHHHH
Confidence            999987521              13445665543    335899999854421100    01111  12234 8999999


Q ss_pred             HHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       137 ~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      .+++.       .++++++++|+.+-++.     ...+...   ..+-...........+++++|++++++.+++.+...
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  233 (248)
T PRK07806        162 DALRALRPELAEKGIGFVVVSGDMIEGTV-----TATLLNR---LNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPS  233 (248)
T ss_pred             HHHHHHHHHhhccCeEEEEeCCccccCch-----hhhhhcc---CCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccC
Confidence            87743       57899999988765552     1111100   000000000001136889999999999999877667


Q ss_pred             CeeEEeeCCee
Q 025908          210 RQVFNISGEKY  220 (246)
Q Consensus       210 ~~~~~~~~~~~  220 (246)
                      +++|++++++.
T Consensus       234 g~~~~i~~~~~  244 (248)
T PRK07806        234 GHIEYVGGADY  244 (248)
T ss_pred             ccEEEecCccc
Confidence            89999999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.3e-18  Score=131.67  Aligned_cols=206  Identities=19%  Similarity=0.178  Sum_probs=137.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+.........        .....+..+.+|++|.+++.+++++     .++|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLAE--------KYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655211100        1124678889999999888877764     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    +    .+.++..++  +.+++|++||...+.+...          ...|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----------~~~Y~  150 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----------SGIYH  150 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----------ccHHH
Confidence            9999986421                    1    122333333  5679999999776532211          11234


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--------HHHHHHHHHhCCCcccCCCCCceeee-eeHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQVTQL-GHVK  193 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~  193 (246)
                      .+|...+.+.+       ..|++++++||+.+..+......        ...........         .....+ ++++
T Consensus       151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p~  221 (275)
T PRK08263        151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WSERSVDGDPE  221 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HHhccCCCCHH
Confidence            88888776552       36899999999988775321100        00010111000         011233 7799


Q ss_pred             HHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHH
Q 025908          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV  233 (246)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~  233 (246)
                      |++++++.+++.+...+..++..+++.+++.++.+.+.+.
T Consensus       222 dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        222 AAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            9999999999887666666665666778888888888764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.75  E-value=1.8e-17  Score=126.93  Aligned_cols=195  Identities=17%  Similarity=0.148  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|+..+......     ........+.++.+|+.|.+++.+++++.     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAE-----LVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211110     00111245889999999999988888642     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +..++++++    .  +.++||++||...++.          +..+...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y  156 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY  156 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence            9999876321                    122344443    2  5678999999776411          11122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+++       ..+++++++||+.+++|.........+........++         ..+++++|+|++++.
T Consensus       157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  227 (251)
T PRK12826        157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             78888777653       3589999999999999853221111111122121111         147889999999999


Q ss_pred             HhcCCC--CCCeeEEeeCCe
Q 025908          202 VLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (246)
                      ++..+.  ..+++|++.++.
T Consensus       228 l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            886542  368899998865

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.75  E-value=7.9e-17  Score=125.18  Aligned_cols=210  Identities=20%  Similarity=0.198  Sum_probs=137.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+||.++++.|+++|++|++++|+..+......     .....  ..++.++.+|+.+++++.+++++.     ++
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE-----EIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999999999999998654211110     00000  146788999999999888877642     68


Q ss_pred             cEEEecCCCCcc---------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD---------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        74 d~vi~~~~~~~~---------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |++||+++....                     +...+++++    .  +..+++++||...+..           ..+.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~  156 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----------HRWF  156 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------CCCC
Confidence            999999984210                     112233332    1  3358999999776421           1122


Q ss_pred             Ccc-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          127 SRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..| .+|...|.+++.       .+++++.+||+.+.++...... ............+         ...+++++|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~  227 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRVGEVEDVAN  227 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCCcCHHHHHH
Confidence            344 899999988752       4799999999988776321100 0111111111111         123566999999


Q ss_pred             HHHHHhcCCCC--CCeeEEeeCCeee----cHHHHHHHHHHHhC
Q 025908          198 AFVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKVTG  235 (246)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~~~~~----s~~~l~~~~~~~~g  235 (246)
                      ++..++.++..  .++++++++++.+    +..|+++.+.+..|
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            99999976543  4789999998776    77777777665544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=2.2e-16  Score=121.08  Aligned_cols=197  Identities=14%  Similarity=0.065  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||++++++|+++|++|++..|..........    .........+..+.+|+++++++..++++     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL----KMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999887765422111000    00111123567889999999888777753     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |||++|....                    +...++++    ++...+||++||...+.+           ..+...| .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  156 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSIYGA  156 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchHHHH
Confidence            9999985211                    11222232    233458999999776532           2233445 8


Q ss_pred             cHHHHHHHHHh------cCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          131 GKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       131 ~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      +|...|.+++.      .++.+..++|+.+.++.....  ...........  ..      .....+++++|+|++++.+
T Consensus       157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--KF------TLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--hc------CcCCCCCCHHHHHHHHHHH
Confidence            89888877642      378999999998877631100  00000000000  01      1123579999999999999


Q ss_pred             hcCCCCCCeeEEeeCCee
Q 025908          203 LGNEKASRQVFNISGEKY  220 (246)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~  220 (246)
                      +..+...+++|++.+++.
T Consensus       229 ~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        229 LKIESITGQVFVLDSGES  246 (252)
T ss_pred             hCccccCCCeEEecCCee
Confidence            976666788999999864

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.4e-16  Score=121.25  Aligned_cols=205  Identities=14%  Similarity=0.104  Sum_probs=137.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+........       ...++..+.+|+.+.+++..++++.     ++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL-------GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865521111100       0246888999999999888777632     5899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++    .  +..++|++||...+...           ....|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~y~  149 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----------GHPAYS  149 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----------CCcccH
Confidence            9999986321                    111223332    2  45689999985442110           001234


Q ss_pred             ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 ~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|...+.+++.       .+++++.+||+.++++.....  ....+.......         ....++++++|++++++
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~  220 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAVL  220 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHHH
Confidence            788888876642       479999999999988742110  011111111111         12246899999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeeecHHHHHHHHHH
Q 025908          201 QVLGNE--KASRQVFNISGEKYVTFDGLARACAK  232 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~  232 (246)
                      .++...  ...+.++++.++...+.+|+.+.+.+
T Consensus       221 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        221 FLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            999653  33578889999998889999887754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.5e-16  Score=121.83  Aligned_cols=193  Identities=17%  Similarity=0.194  Sum_probs=128.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|+........     .+......++..+.+|+++.+++..+++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     000111235778899999998887777532     6899


Q ss_pred             EEecCCCCcc-----------------------chHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD-----------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~-----------------------~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |||+++....                       +..++++++.      +.+++|++||...|..              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------~  152 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY--------------S  152 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC--------------c
Confidence            9999986310                       1223333322      3569999999877531              2


Q ss_pred             Ccc-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          127 SRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      +.| .+|...|.+++.       .++++++++|+.+..+.........+........+...         +.+++|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~  223 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------MGTPEDLVGM  223 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC---------CcCHHHHHHH
Confidence            344 899988887642       47899999999888765322112222223333322211         3458999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCeee
Q 025908          199 FVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++.++...  ...+++|++.+++.+
T Consensus       224 ~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        224 CLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHhChhhhCcCCCEEEECCCeec
Confidence            99998754  236789999998754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=121.92  Aligned_cols=184  Identities=18%  Similarity=0.235  Sum_probs=126.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+..+..+.+.+.     .  ..+++++.+|+.|.+++.+++++     .++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV-----P--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH-----h--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            699999999999999999999999999875532211100     0  24577888999999888877763     26899


Q ss_pred             EEecCCCCc--------------------cchHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++...                    .+..++++++    .  +.+++|++||...++..           .+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCcchh
Confidence            999987532                    1122344432    2  57899999998875432           122234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       +.+++++.+||+.++++....             . .+    ......+++++|++++++.
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~-------------~-~~----~~~~~~~~~~~dva~~~~~  216 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA-------------D-MP----DADFSRWVTPEQIAAVIAF  216 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh-------------c-CC----chhhhcCCCHHHHHHHHHH
Confidence             77777666553       358999999999998873110             0 00    0112237899999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++.++  ...++.+.+.+++.
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HhCcccccccceEEEecCCEe
Confidence            99764  23578888888764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.72  E-value=2.6e-17  Score=126.58  Aligned_cols=201  Identities=17%  Similarity=0.218  Sum_probs=130.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|+.....+...        .....+..+.+|+++.+++..+++.     ..+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL--------EIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321111        1124588899999999888887764     26899


Q ss_pred             EEecCCCCc--------------------cchHHHHHhCC-------CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~--------------------~~~~~l~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++...                    .+...+++++.       ...++|++||.....           +..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  152 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-----------GEALVSH  152 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------CCCCCch
Confidence            999987521                    12333444432       124799999854321           1112334


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh---CCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+.+       ..+++++.++|+.++++.... . ...+.....   +......+.......+.+++|+|+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-V-DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-h-hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            4 88988877653       368999999999999874211 0 000100000   000001122223456889999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      ++..++..+  ...+++|++.+++.+|
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHhCcccccccCcEEeecCCEeCC
Confidence            999999754  2467899999987653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=122.80  Aligned_cols=201  Identities=14%  Similarity=0.118  Sum_probs=127.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+.+........   ........++.++.+|++|++++.+ +++     .++|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ---ATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH---HHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            79999999999999999999999999986552111000   0000012468899999999888776 432     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...++++    ++  +..++|++||......           ..+...|
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  153 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----------FPGLSPY  153 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----------CCCCchh
Confidence            9999886321                    12223333    33  5678999998654211           1122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc------------hHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                       .+|...+.+++       ..+++++++||+.+.++.....            .....+.......     .  .....+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~  226 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-----N--SGSDTF  226 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-----h--hhhhcc
Confidence             78888887654       3589999999999888731100            0001111111000     0  112346


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHH
Q 025908          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (246)
                      ++++|+|++++.+++++... ..|+++++..+++.
T Consensus       227 ~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence            78999999999999887643 57888877655543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.71  E-value=3.5e-16  Score=119.44  Aligned_cols=194  Identities=18%  Similarity=0.234  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|.++|++|+++.|++.+......     ........+.++.+|+.|++++.+++++     ..+|+
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAA-----ELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765221110     0111134688899999999988887763     25799


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +..++++++    .  +.+++|++||.....           +..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~~~y  154 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQTNY  154 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCCcHh
Confidence            9999976321                    122333333    2  567999999865421           11222334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...|.+++       +.+++++++||+.++++.... ............  ++       ...+++.+|+++++..
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~  224 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKE--IP-------LGRLGQPEEVANAVAF  224 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHH
Confidence             77877665542       358999999999999985321 111111111111  11       1457889999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++...  ...+++|++++|..
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HcCchhcCccCCEEEeCCCee
Confidence            98653  33578999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.7e-16  Score=121.60  Aligned_cols=194  Identities=15%  Similarity=0.179  Sum_probs=125.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|.++++.|+++|++|+++.|+..........     . .....+.++.+|++|++++.+++++     .++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA-----I-AAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHH-----H-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211110     0 0124688999999999998887764     27999


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +.    +.++.+++  +.++++++||...+...           .....|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y  153 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----------RGRAAY  153 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----------CCccHH
Confidence            9999986321                    11    22334443  56789999997653211           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH----HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                       .+|...+.+++       ..+++++.+||+.++++.......    ...+.......        .....+++.+|+++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~  225 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQ  225 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHH
Confidence             88888877653       248999999999998874211000    00000000000        01123678999999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCCe
Q 025908          198 AFVQVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~  219 (246)
                      +++.++.++.  ..|..+.+.++.
T Consensus       226 ~~~~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        226 AALFLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             HHHHHcCchhcCccCCEEEECCCe
Confidence            9999987643  246677776653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.69  E-value=2.1e-15  Score=116.20  Aligned_cols=192  Identities=15%  Similarity=0.173  Sum_probs=125.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|+++.|+... ....     .+.......+.++.+|+++.+++.+++++     .++|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVA-----AELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHH-----HHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            7999999999999999999999999987421 1100     01111124577899999998887777753     26899


Q ss_pred             EEecCCCCc--c-----------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREA--D-----------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~--~-----------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++...  .                       .++.++..+.  +..++|++||...++.            ....|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~Y  155 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------NRVPY  155 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------CCCcc
Confidence            999997421  0                       0123444443  4568999999776431            11224


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCC------------CchHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ..+|...+.+.+       ..+++++.++|+.+++|...            ..+...+........++.         -+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  226 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RY  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc---------cC
Confidence            489998887664       24899999999999997310            001111222222222221         23


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .+++|++++++.++...  ...++++++.+++
T Consensus       227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            45899999999988653  2367888888764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.69  E-value=1.1e-15  Score=117.55  Aligned_cols=201  Identities=14%  Similarity=0.093  Sum_probs=126.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+..........   ......+.++.+|++|++++.+++++.     ++|+
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~   86 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK---EFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDG   86 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh---hcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Confidence            79999999999999999999999999886552111100000   000134667799999999988888632     3899


Q ss_pred             EEecCCCCcc---------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-CC
Q 025908           76 VYDINGREAD---------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DP  125 (246)
Q Consensus        76 vi~~~~~~~~---------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~  125 (246)
                      |||+++....                           .++.++.+++  +..++|++||...+..... +..+..+. .+
T Consensus        87 vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~  165 (256)
T PRK09186         87 AVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMTSP  165 (256)
T ss_pred             EEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccCCc
Confidence            9999863210                           1233444443  5679999998665432211 11122222 22


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..|..+|...+.+.+       ..++++++++|+.++++..     ..+........+         ...+++++|+|++
T Consensus       166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~dva~~  231 (256)
T PRK09186        166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCN---------GKGMLDPDDICGT  231 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCC---------ccCCCCHHHhhhh
Confidence            334488988887753       3579999999998876531     112222211110         1246789999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.++.+.  ...++.+.+.++.
T Consensus       232 ~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        232 LVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             HhheeccccccccCceEEecCCc
Confidence            99999654  2357777777763

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.69  E-value=3e-16  Score=112.46  Aligned_cols=149  Identities=19%  Similarity=0.122  Sum_probs=111.0

Q ss_pred             chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH--hcCCceEEeecceeeCCC
Q 025908           86 EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--SKGVNWTSLRPVYIYGPL  158 (246)
Q Consensus        86 ~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--~~~~~~~ilR~~~i~g~~  158 (246)
                      .++.+.+++.    ..+.+|.+|..++|-++....++|+++-...++. +.-.+.|...+  ....+.+++|.|.+.|.+
T Consensus       107 ~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~g  186 (315)
T KOG3019|consen  107 VTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKG  186 (315)
T ss_pred             HHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecC
Confidence            3666777765    4568999999999988777778888776555554 22223343333  234789999999999986


Q ss_pred             CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      ...........++--+.++   |++.++++|||++|++..+..+++++... ++.|-..+++++..|+.+.+.++++++.
T Consensus       187 GGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~~~v~-GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  187 GGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALENPSVK-GVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             CcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhcCCCC-ceecccCCCccchHHHHHHHHHHhCCCc
Confidence            4322222223334455665   89999999999999999999999987654 5899999999999999999999999874

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.3e-16  Score=120.13  Aligned_cols=191  Identities=17%  Similarity=0.188  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+... +..       ....++..+.+|++|.+++.+++++     .++|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-l~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD-FEA-------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH-HHh-------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998665211 110       0124688899999999988887764     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    ++.+++++    ++  +..++|++||...+...           .+...|
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~~~Y  150 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGIGYY  150 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCcchh
Confidence            9999986321                    12234444    22  45689999997664221           122344


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc------hHHHH---HHHHHhCCCcccCCCCCceeeeeeH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWF---FHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                       .+|..+|.+++       ..+++++++||+.+.++.....      ....+   +........   ...   ...+.++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~  224 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE---AKS---GKQPGDP  224 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH---hhc---cCCCCCH
Confidence             88888877653       2589999999999977632110      01111   111110000   011   1234578


Q ss_pred             HHHHHHHHHHhcCCCCCCeeEEeeC
Q 025908          193 KDLARAFVQVLGNEKASRQVFNISG  217 (246)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~~~~  217 (246)
                      +|+|++++.++..+.. ...|.++.
T Consensus       225 ~dva~~~~~~l~~~~~-~~~~~~g~  248 (277)
T PRK06180        225 AKAAQAILAAVESDEP-PLHLLLGS  248 (277)
T ss_pred             HHHHHHHHHHHcCCCC-CeeEeccH
Confidence            9999999999987653 33444443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=117.82  Aligned_cols=192  Identities=18%  Similarity=0.157  Sum_probs=123.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+.....+..     .+.......+.++.+|+++.+++.+++++     .++|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEELV-----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999998754421110     00111124678889999999998888763     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +..+++++    +.  +..+||++||...+...           .+...|
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  159 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----------PHMGAY  159 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------CCcchH
Confidence            9999986321                    12223332    21  44579999997765321           112334


Q ss_pred             -ccHHHHHHHHHh-------cCCceEEeecceeeCCCCC---CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       130 -~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                       .+|...|.+++.       .+++++++||+.+.++...   ......++......      + ......+++++|+|++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~dva~a  232 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLRASDLARA  232 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccCHHHHHHH
Confidence             889999887642       3899999999987654211   11111111111110      1 1123458999999999


Q ss_pred             HHHHhcCCCCCCeeEEee
Q 025908          199 FVQVLGNEKASRQVFNIS  216 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~  216 (246)
                      ++.+++++. .+.+||+.
T Consensus       233 ~~~~~~~~~-~~~~~~~~  249 (274)
T PRK07775        233 ITFVAETPR-GAHVVNME  249 (274)
T ss_pred             HHHHhcCCC-CCCeeEEe
Confidence            999998753 34567665

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.2e-16  Score=118.72  Aligned_cols=193  Identities=19%  Similarity=0.236  Sum_probs=123.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---------   70 (246)
                      |||+|++|.++++.|+++|++|.++ .|+..+......     ........+.++.+|++|++++.+++++         
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIR-----EIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999876 455433111110     0011124688899999999998888764         


Q ss_pred             --CCccEEEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           71 --KGFDVVYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                        .++|++||++|....                    +..+++++    +....++|++||..++.+.           .
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~  155 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-----------T  155 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----------C
Confidence              258999999986321                    12223333    2233589999998775321           1


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-HHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +...| .+|...|.+++       ..++++++++|+.++++....... ..+.......         .....+++++|+
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dv  226 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS---------SVFGRIGQVEDI  226 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc---------CCcCCCCCHHHH
Confidence            22334 88988887652       357999999999998874211000 0011111111         112345679999


Q ss_pred             HHHHHHHhcCCC--CCCeeEEeeCC
Q 025908          196 ARAFVQVLGNEK--ASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~  218 (246)
                      ++++..++..+.  ..+++|++.++
T Consensus       227 a~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        227 ADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHcCcccCCcCCCEEEeCCC
Confidence            999998887542  35789999876

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.1e-15  Score=116.99  Aligned_cols=194  Identities=15%  Similarity=0.168  Sum_probs=126.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|+..+.......     ... ..++.++.+|+.+++++..++++.     ++|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAE-----ILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----Hhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999987653211110     000 245889999999999998887642     6899


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                     +    ++.+++.+.  +.++||++||...+.+.           .+...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-----------PGLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC-----------CCchH
Confidence            9999986321                     0    223334443  56789999998775321           12233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH---HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+++       ..+++++.++|+.+.++.......   ..........         .....+++++|+|+
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~  224 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIAN  224 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHH
Confidence            4 78877776553       248999999999987653211000   0111111111         11234678999999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCCee
Q 025908          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      +++.++..+.  ..+..+.+.++..
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        225 AALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             HHHHHhCccccCCCCCeEEECCCcc
Confidence            9999996542  3466777777643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.68  E-value=6.7e-16  Score=118.85  Aligned_cols=203  Identities=13%  Similarity=0.124  Sum_probs=126.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-h-cCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|+||.++++.|.++|++|++++|+.........     .... . ...+.++.+|+++.+++.+++++     .++
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQ-----EINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999987654211110     0000 0 13588999999999888877764     368


Q ss_pred             cEEEecCCCCcc--------------------c----hHHHHHhCC--C-CceEEEEeecce-eccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~----~~~l~~a~~--~-~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+++....                    +    .+.++..+.  + ..++|++||... ++.            ..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------~~  150 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------KH  150 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------CC
Confidence            999999985321                    1    122333332  3 358999988543 211            11


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH--hCCCcccCCCCCceeeeeeHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ...| .+|...+.+++       ..|++++.+||+.++++......+..+.....  .........+......+++++|+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  230 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDV  230 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHH
Confidence            2234 78888766542       46899999999988876432222222111100  00000001112233467889999


Q ss_pred             HHHHHHHhcCCC--CCCeeEEeeCCee
Q 025908          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      +++++.++.+..  ..|+.|++.+++.
T Consensus       231 ~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        231 LNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHHHcCcccccccCceEEEcCCEE
Confidence            999999886532  3578899999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.6e-15  Score=114.87  Aligned_cols=194  Identities=16%  Similarity=0.219  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|...+..+.... ...+.......+.++.+|+.+.+.+.++++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADA-VAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999988754332111110 0011111234688999999999888877753     36899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC------C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +..++++++      + +.+++|++||...+...           .+...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  159 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----------RGQVN  159 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------CCCch
Confidence            9999986431                    123334332      1 45789999997765321           12223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+++       ..+++++++||+.+.++........   .......+.         ..+.+.+|+++++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~  227 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVA  227 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHH
Confidence            4 78887776543       2589999999999999853322211   111111111         12346899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCC
Q 025908          201 QVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~  218 (246)
                      .++...  ...++.+++.++
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHcCcccCCccCcEEEeCCC
Confidence            988653  234678888765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=3.6e-15  Score=114.20  Aligned_cols=195  Identities=17%  Similarity=0.174  Sum_probs=125.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++ .|+..+..+...     .......++.++.+|++|++++..++++.     ++|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAE-----EIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999998764 565433211100     01111346888999999999988888642     689


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||+++....                    +...++++    +.  +.++||++||...+.           +..+...
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  153 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YLENYTT  153 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCccH
Confidence            99999985321                    11122232    22  456999999866532           1112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...|.+++       ..+++++.++|+.+..+..... ....+........+         ...+++++|+|+++
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  224 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHH
Confidence            4 89999988764       3679999999999877642110 00111111111111         12368899999999


Q ss_pred             HHHhcCCC--CCCeeEEeeCCee
Q 025908          200 VQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      +.++.++.  ..++.+++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHcCchhcCccCCEEEECCCee
Confidence            99987643  3578888888764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.67  E-value=6.2e-16  Score=124.04  Aligned_cols=233  Identities=15%  Similarity=0.156  Sum_probs=155.1

Q ss_pred             CCccccchHHHHHHHHHCC---CeEEEEecCCCcccc--CC----C-CCCc---hhhhhhcCceEEEEccCCC------H
Q 025908            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QL----P-GESD---QEFAEFSSKILHLKGDRKD------Y   61 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~--~~----~-~~~~---~~~~~~~~~v~~~~~D~~~------~   61 (246)
                      ||||||+|+-+++.|++.-   .+++.+.|.+.....  .+    . ..++   .........+..+.||+.+      .
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            7999999999999999863   489999998766311  01    0 0000   0111123678889999975      3


Q ss_pred             HHHHHhhhcCCccEEEecCCC-------------CccchHHHHHhCC---CCceEEEEeecceeccC---CCCCCCCCC-
Q 025908           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD-  121 (246)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~~~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~---~~~~~~e~~-  121 (246)
                      .+++...+  .+++|||+|+.             |..++.++++.|+   +.+.|+++||..+.-..   ...++.+.. 
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            45554555  99999999885             4557888888876   78999999998775210   000111000 


Q ss_pred             --------------------------CCCCCCccccHHHHHHHHHh--cCCceEEeecceeeCCCCC--CchHHH-----
Q 025908          122 --------------------------TVDPKSRHKGKLNTESVLES--KGVNWTSLRPVYIYGPLNY--NPVEEW-----  166 (246)
Q Consensus       122 --------------------------~~~~~~~~~~k~~~e~~~~~--~~~~~~ilR~~~i~g~~~~--~~~~~~-----  166 (246)
                                                ...|..|.-+|+.+|..+.+  .+++.+|+||+.+......  .+|...     
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~  255 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPD  255 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCc
Confidence                                      11366677899999999864  6799999999999885421  122111     


Q ss_pred             -HHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc----C-CCCCCeeEEeeCCe--eecHHHHHHHHHHHhC
Q 025908          167 -FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG----N-EKASRQVFNISGEK--YVTFDGLARACAKVTG  235 (246)
Q Consensus       167 -~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~----~-~~~~~~~~~~~~~~--~~s~~~l~~~~~~~~g  235 (246)
                       ++...-+|..-.+..+.+...+.|.+|.++++++.+.-    + +.....+||+++++  +++|.++.+...+.+-
T Consensus       256 g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  256 GVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             eEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence             11122233333445677788999999999999987651    1 11235699999964  6999999999887664

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.67  E-value=5.5e-16  Score=119.65  Aligned_cols=199  Identities=18%  Similarity=0.194  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|+++.|+.........     ...  ..++.++.+|+.+++.+.+++++     .++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999997654211100     000  12568899999999988887764     27999


Q ss_pred             EEecCCCC-cc--------------------chHHHHHh----CC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGRE-AD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |||+++.. ..                    +...++++    +.  +. ++++++||......           ..+..
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-----------~~~~~  158 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-----------YPGRT  158 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-----------CCCCc
Confidence            99999865 11                    12223333    22  33 56888776543211           11122


Q ss_pred             -ccccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc-ccC---CCCCceeeeeeHHHH
Q 025908          128 -RHKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIP---GSGIQVTQLGHVKDL  195 (246)
Q Consensus       128 -~~~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~i~~~D~  195 (246)
                       |..+|...|.+++.       .+++++++||+.++++.... ........  .+... ...   ........+++++|+
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  235 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEARAQQ--LGIGLDEMEQEYLEKISLGRMVEPEDI  235 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhhhhc--cCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence             33888888877532       48999999999999985211 11000000  00000 000   000011248999999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      ++++..++..  ....++.|+++++..
T Consensus       236 a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        236 AATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHHcCccccCccCcEEEeCCCcc
Confidence            9999988854  234678999988753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=5.4e-15  Score=113.61  Aligned_cols=198  Identities=18%  Similarity=0.262  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|.++|++|++++|..........    ........++.++.+|+++++++.++++..     .+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQ----QELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543111000    001111246889999999998887776532     6899


Q ss_pred             EEecCCCCcc----------------------chHHHHHhC----C---C-----CceEEEEeecceeccCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------EVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~~~l~~a~----~---~-----~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                      |||+++....                      +..++++++    .   +     ..+++++||...+.+..        
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  155 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP--------  155 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC--------
Confidence            9999985211                      122233332    1   1     46799999876632111        


Q ss_pred             CCCCCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          122 TVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       122 ~~~~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                        ....|..+|...|.+++       ..+++++++||+.+.++.... ....+....... ..+       ...+.+.+|
T Consensus       156 --~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~~-------~~~~~~~~d  224 (256)
T PRK12745        156 --NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LVP-------MPRWGEPED  224 (256)
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CCC-------cCCCcCHHH
Confidence              11234488999887653       368999999999998874321 111121111111 111       123557999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +++++..++...  ...+..|++.++...
T Consensus       225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        225 VARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            999999988643  235789999887543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.67  E-value=1.6e-15  Score=116.57  Aligned_cols=197  Identities=21%  Similarity=0.233  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|+..+......     ........+..+.+|+.|.+++.+++++     ..+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAE-----SLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221110     0111123578899999999988888763     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++.      +..++|++||.....           +......|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y  159 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------ARPGIAPY  159 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------CCCCCccH
Confidence            9999986321                    1222333322      457899999865421           11123344


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...|.+++       ..+++++.+||+.+.++...... ...+...+....+         ...+..++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACV  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88988887653       46899999999999887421110 0111111111111         123556899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeeec
Q 025908          201 QVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      .++...  ...++++++.++...|
T Consensus       231 ~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        231 FLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHcCchhcCccCcEEEECCCeecc
Confidence            999653  3357889998886544

>PRK06182 short chain dehydrogenase; Validated

Probab=99.67  E-value=2.9e-15  Score=116.19  Aligned_cols=194  Identities=16%  Similarity=0.139  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+.++..+ +.          ..++.++.+|++|.+.+.+++++     .++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LA----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321 11          24688899999999988887763     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..++  +..++|++||...+...         + ....|.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---------~-~~~~Y~  147 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT---------P-LGAWYH  147 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC---------C-CccHhH
Confidence            9999986421                    1    334444554  55789999986542110         0 111233


Q ss_pred             ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc--------ccCCCCCceeeeeeHHH
Q 025908          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       130 ~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~D  194 (246)
                      .+|...+.+.       ...+++++++||+.+.++..... ...+... ......        ...........+.+++|
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-ADHLLKT-SGNGAYAEQAQAVAASMRSTYGSGRLSDPSV  225 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-hhhhccc-ccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence            8898888764       24689999999999988742100 0000000 000000        00000011234568999


Q ss_pred             HHHHHHHHhcCCCCCCeeEEeeCC
Q 025908          195 LARAFVQVLGNEKASRQVFNISGE  218 (246)
Q Consensus       195 ~a~~~~~~~~~~~~~~~~~~~~~~  218 (246)
                      +|++++.++.... ....|+++.+
T Consensus       226 vA~~i~~~~~~~~-~~~~~~~g~~  248 (273)
T PRK06182        226 IADAISKAVTARR-PKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHhCCC-CCceeecCcc
Confidence            9999999997643 2346766554

>PRK06128 oxidoreductase; Provisional

Probab=99.67  E-value=9e-15  Score=114.92  Aligned_cols=198  Identities=19%  Similarity=0.253  Sum_probs=128.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++..|+..... ....    .........+.++.+|+++.+++.+++++     .++|
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVV----QLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHH----HHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999988776543210 0000    01111134678899999999888887764     2689


Q ss_pred             EEEecCCCCcc---------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      ++||+++....                     +...+++++    ....++|++||...|.....          ...|.
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------~~~Y~  206 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT----------LLDYA  206 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC----------chhHH
Confidence            99999985311                     122233332    33358999999887632211          11244


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|..++.+++       ..|++++.++|+.+.++.... ..............+         ...+...+|+|.+++.
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~  277 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHH
Confidence            88998887764       258999999999999985321 111112222211111         1235568999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCeee
Q 025908          202 VLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++...  ...++++++.++..+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            88653  235789999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.3e-15  Score=114.88  Aligned_cols=182  Identities=16%  Similarity=0.144  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|++|+++++.|+++ ++|++++|+...... +.        ....+++++.+|+.|.+++.++++.. ++|+|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~-~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDE-LA--------AELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH-HH--------HHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 999999998654211 10        01246889999999999999988743 59999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHH
Q 025908           80 NGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (246)
                      ++.....                        .++++++++ ..+++|++||...++....          ...|..+|..
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----------~~~y~~~K~a  148 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG----------WGSYAASKFA  148 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC----------CchHHHHHHH
Confidence            9863210                        233444444 4578999998776532111          1123378888


Q ss_pred             HHHHHHh-----cC-CceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          135 TESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       135 ~e~~~~~-----~~-~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      .+.+++.     .+ +++..++|+.+.++..     ..+...  .+..       .....+++++|++++++.+++++. 
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-----~~~~~~--~~~~-------~~~~~~~~~~dva~~~~~~l~~~~-  213 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPGRTDTDMQ-----RGLVAQ--EGGE-------YDPERYLRPETVAKAVRFAVDAPP-  213 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecCCccchHh-----hhhhhh--hccc-------cCCCCCCCHHHHHHHHHHHHcCCC-
Confidence            7765532     24 8888888887655421     111000  1111       112357899999999999998764 


Q ss_pred             CCeeEEeeC
Q 025908          209 SRQVFNISG  217 (246)
Q Consensus       209 ~~~~~~~~~  217 (246)
                      .+.++++.-
T Consensus       214 ~~~~~~~~~  222 (227)
T PRK08219        214 DAHITEVVV  222 (227)
T ss_pred             CCccceEEE
Confidence            355666654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.4e-15  Score=112.28  Aligned_cols=195  Identities=18%  Similarity=0.193  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|++|+++++.|+++|++|++++|+.........     .. +...+++++.+|+++.+++.+++++. ++|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR-----AL-GGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999997544211100     00 00246888999999999999988753 47999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHH
Q 025908           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      ++....                    +...++++..  +..++|++||...+...           .+...| .+|..++
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------CcchHHHHHHHHHH
Confidence            986321                    1122333322  45789999988775321           122335 8899988


Q ss_pred             HHHHh-----cCCceEEeecceeeCCCCCC---chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          137 SVLES-----KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       137 ~~~~~-----~~~~~~ilR~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      .+.+.     .+++++.++|+.+..+....   .....++.......+.         ..+...+|+|++++.++..+..
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCCCc
Confidence            87653     24778888888775542100   0001111111111111         1133579999999999987666


Q ss_pred             CCeeEEeeCCeee
Q 025908          209 SRQVFNISGEKYV  221 (246)
Q Consensus       209 ~~~~~~~~~~~~~  221 (246)
                      .+++|++.++.++
T Consensus       217 ~G~~~~v~gg~~~  229 (230)
T PRK07041        217 TGSTVLVDGGHAI  229 (230)
T ss_pred             CCcEEEeCCCeec
Confidence            6889999988653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.65  E-value=8.8e-15  Score=112.19  Aligned_cols=193  Identities=16%  Similarity=0.106  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|+...   .           ....+..+.+|+.+.+.+.+++++     .++|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---Q-----------EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---h-----------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997611   0           025688899999999988888763     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++    .  +..++|++||.....           +..+...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y  148 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PRIGMAAY  148 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CCCCCchh
Confidence            9999886321                    112233332    2  345899999865421           11223344


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHH-HHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...|.+++       ..++++++++|+.++++.....+....... ...+..... ........+++++|+|++++
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF-KLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH-hhcCCCcccCCHHHHHHHHH
Confidence             88888887663       368999999999998874211000000000 000000000 00111235788999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...++++.+.++.
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHhcchhcCccCcEEEECCCe
Confidence            998643  3456777777764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.3e-15  Score=112.72  Aligned_cols=196  Identities=21%  Similarity=0.190  Sum_probs=121.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|+...++........    ..........+.++.+|++|.+++.+++++     ..+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999887765432211100    001111124577899999999988887763     26899


Q ss_pred             EEecCCCCcc---------------------chHHHHHhCC-----C----CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------EVEPILDALP-----N----LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~~-----~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |||+++....                     +...+++++.     .    ..++|++||...+.....         ..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------~~  154 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------EY  154 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------Cc
Confidence            9999986421                     1112333321     1    136899998654311110         01


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..|..+|...|.+++       ..+++++++||+.+++|..................++..         +.+++|++++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a~~  225 (248)
T PRK06123        155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVARA  225 (248)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHHH
Confidence            124489999888653       248999999999999984321112222222222222211         2358999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCC
Q 025908          199 FVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      ++.++...  ...++.|++.++
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        226 ILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHhCccccCccCCEEeecCC
Confidence            99988653  245788888775

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=1.8e-14  Score=110.04  Aligned_cols=193  Identities=20%  Similarity=0.262  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||||++|+++++.|+++|++|+++.|+..+......    .........+.++.+|+.+.+++.+++++     .++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999887653111100    00111135688899999999988887763     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecce-eccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +..++++++    .  +.++++++||... ++..            ....
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~~~~  154 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------GQAN  154 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------CCch
Confidence            9999986321                    122333332    2  4568999998643 2211            1223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+++       ..++++++++|+.+.++... .....+........+.         ..+.+.+|+++++.
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~  224 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-ALPEDVKEAILAQIPL---------GRLGQPEEIASAVA  224 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc-ccChHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            4 78887776543       35899999999987655321 1112222222221111         23567899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCe
Q 025908          201 QVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .++..  ....++.|++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            88865  33467899998764

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.5e-15  Score=113.88  Aligned_cols=190  Identities=17%  Similarity=0.202  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|++|.++++.|.++|++|++++|+..+......          ..+..++.+|+++.+.+.++++.. ++|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----------ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            6999999999999999999999999997654211100          124678899999999888888742 58999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC------C-CceEEEEeecceeccCCCCCCCCCCCCCCCCccccH
Q 025908           80 NGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (246)
                      ++....                    +..++++++.      + ..++|++||...+.+..          ....|..+|
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~y~~sK  154 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------DHLAYCASK  154 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------CCcHhHHHH
Confidence            986321                    1223333322      1 36899999877653211          112234889


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHH-HHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      ..+|.+++       ..+++++.+||+.++++.....+.. .....+...         .....+++++|+++++..++.
T Consensus       155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~  225 (245)
T PRK07060        155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLLS  225 (245)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcC
Confidence            98887653       2479999999999998752211110 011111111         012347889999999999997


Q ss_pred             CC--CCCCeeEEeeCCe
Q 025908          205 NE--KASRQVFNISGEK  219 (246)
Q Consensus       205 ~~--~~~~~~~~~~~~~  219 (246)
                      .+  ...|+.+++.++.
T Consensus       226 ~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        226 DAASMVSGVSLPVDGGY  242 (245)
T ss_pred             cccCCccCcEEeECCCc
Confidence            54  2357888887764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.7e-14  Score=112.77  Aligned_cols=196  Identities=19%  Similarity=0.228  Sum_probs=126.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|+++.|+.......+.    ........++.++.+|+.+.+.+.+++++     .++|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987543111110    01111124678899999999888887764     26899


Q ss_pred             EEecCCCCcc---------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCccc
Q 025908           76 VYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (246)
                      |||+++....                     +..++++++    +...++|++||...+.....          ...|..
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------~~~Y~~  197 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------LIDYSA  197 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------cchhHH
Confidence            9999985311                     122233332    22358999999887643211          112348


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|..++.+++       ..+++++.++|+.++.+.................         .....+.+++|+|++++.++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN---------TPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhc---------CCcCCCcCHHHHHHHHHHHc
Confidence            8888877653       2489999999999988742221111111111111         11234677999999999999


Q ss_pred             cCCC--CCCeeEEeeCCe
Q 025908          204 GNEK--ASRQVFNISGEK  219 (246)
Q Consensus       204 ~~~~--~~~~~~~~~~~~  219 (246)
                      ....  ..+..+++.++.
T Consensus       269 ~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CcccCCccCcEEEeCCCc
Confidence            7542  357788888764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.64  E-value=1.2e-14  Score=111.05  Aligned_cols=194  Identities=18%  Similarity=0.193  Sum_probs=124.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|+++.++.........    ........++.++.+|+.+++++.+++++     ..+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV----NELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999876654322111110    01111124688899999999998888874     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++    .  +..++|++||...+...           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  156 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FGQTNY  156 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CCCcch
Confidence            9999986321                    122233332    1  34689999986553211           122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       ..++++++++|+.+.++.... .............         ....+.+++|++++++.
T Consensus       157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~edva~~~~~  226 (247)
T PRK12935        157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAKI---------PKKRFGQADEIAKGVVY  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHhC---------CCCCCcCHHHHHHHHHH
Confidence             88887776542       248999999999987753111 1111111111111         12357899999999999


Q ss_pred             HhcCCC-CCCeeEEeeCCe
Q 025908          202 VLGNEK-ASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~~-~~~~~~~~~~~~  219 (246)
                      +++... ..++.|++.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        227 LCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HcCcccCccCCEEEeCCCc
Confidence            986542 467899998874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.64  E-value=3.3e-15  Score=114.25  Aligned_cols=179  Identities=16%  Similarity=0.104  Sum_probs=116.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|++.+......        ....++.++.+|+.+.+++.++++.     .++|+
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--------ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211100        0124688899999999888877753     26999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||++|....                     +    ++.++.++.  +..++|++||...+.           +..+...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~  146 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNV  146 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCCch
Confidence            9999985310                     1    233444443  567899999866531           1112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++......+.......  ..   . ..   ...++..+|+|++++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~~---~-~~---~~~~~~~~dvA~~~~  217 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EK---T-YQ---NTVALTPEDVSEAVW  217 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH--Hh---h-cc---ccCCCCHHHHHHHHH
Confidence            4 88888887653       2579999999999876531110000000000  00   0 00   123568999999999


Q ss_pred             HHhcCCC
Q 025908          201 QVLGNEK  207 (246)
Q Consensus       201 ~~~~~~~  207 (246)
                      .++..+.
T Consensus       218 ~l~~~~~  224 (248)
T PRK10538        218 WVATLPA  224 (248)
T ss_pred             HHhcCCC
Confidence            9997653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4e-14  Score=107.32  Aligned_cols=183  Identities=21%  Similarity=0.216  Sum_probs=120.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|.+|.++++.|+++|++|+++.|+....                ...+++.+|+++.+++.+++++    .++|+|
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            69999999999999999999999999986541                1225688999998887776652    368999


Q ss_pred             EecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccc
Q 025908           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (246)
Q Consensus        77 i~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (246)
                      ||+++....                    +    .+.++.+++  +..++|++||...++...           ...|..
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~Y~~  141 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD-----------RTSYSA  141 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-----------chHHHH
Confidence            999986321                    1    122333343  567999999987653211           122448


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      +|...|.+.+       +.+++++.+||+.+..+.....  .............+.         ......+|+|++++.
T Consensus       142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  212 (234)
T PRK07577        142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---------RRLGTPEEVAAAIAF  212 (234)
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---------CCCcCHHHHHHHHHH
Confidence            8888876653       3589999999999887642110  001111111111111         113358999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..+  ...++.+.+.++.
T Consensus       213 l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        213 LLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HhCcccCCccceEEEecCCc
Confidence            99764  2357788777654

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.63  E-value=6.2e-15  Score=113.41  Aligned_cols=194  Identities=15%  Similarity=0.141  Sum_probs=123.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ........++..+.+|+++.+++..++++     .++|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999765421111     11111124678899999999988877754     26899


Q ss_pred             EEecCCCCcc---------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                     +...+++++    . ...++|++||...+.+           ..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  154 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----------QPKYGAY  154 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----------CCCcchh
Confidence            9999985311                     112233332    2 2358999998765321           1122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch----------HHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                       .+|...+.+++       ..+++++.+||+.++++......          ...........         .....+.+
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  225 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPT  225 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCC
Confidence             88888887664       24799999999999998421100          00011111111         11123667


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++|++++++.++...  ...++.+.+.++.
T Consensus       226 ~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        226 DDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            899999999988642  3356667666654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.63  E-value=2.5e-14  Score=109.53  Aligned_cols=195  Identities=18%  Similarity=0.180  Sum_probs=125.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+........     ........++.++.+|+.+.++++++++.     .++|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765421110     00111134688999999999888887753     25899


Q ss_pred             EEecCCCCcc--------------------chHHH----HHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +...+    ++.+.  +.+++|++||...+.....          ...|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----------~~~Y~  153 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----------EAVYA  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----------CchHH
Confidence            9999985211                    12222    33332  5678999999877643211          11233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-----hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .+|...+.+++       ..+++++++||+.++++.....     ....+........+.         ..+...+|+|+
T Consensus       154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~  224 (250)
T TIGR03206       154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRLGQPDDLPG  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCCcCHHHHHH
Confidence            78877766553       2489999999999988731100     000111111111111         12445899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..++..+  ...++++++.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       225 AILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHcCcccCCCcCcEEEeCCCc
Confidence            999998654  3357888888763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.63  E-value=8.4e-15  Score=113.82  Aligned_cols=135  Identities=15%  Similarity=0.221  Sum_probs=100.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|++|+++++.|.++|++|++++|+..... .+.          ..++.++.+|++|.+++.+++++      .++|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            799999999999999999999999999865521 111          24688899999999888777753      2589


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.+++.++  +..++|++||...+.           +..+...
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  147 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PMKYRGA  147 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CCCccch
Confidence            99999875321                    1    345666655  567999999865532           1112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCC
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~  157 (246)
                      | .+|..+|.+.+       ..|+++++++||.+-.+
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            4 89999988753       46899999999988765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.63  E-value=4.7e-14  Score=107.78  Aligned_cols=195  Identities=19%  Similarity=0.243  Sum_probs=119.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||.++++.|+++|++|+++. |+..+..+..     ........++..+.+|+.|++++.+++++     .++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999998754 4433211100     01111124578899999999999888763     2579


Q ss_pred             EEEecCCCCcc---------------------chHHH----HHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD---------------------EVEPI----LDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~~~~l----~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +|||+++....                     +...+    +..+.     +..+||++||...+...         +..
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---------~~~  152 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---------PGE  152 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---------CCc
Confidence            99999986311                     01111    11111     13469999997653211         101


Q ss_pred             CCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...|..+|...|.+++       +.+++++++||+.+++|..................++.         -..+++|+++
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~  223 (247)
T PRK09730        153 YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQ  223 (247)
T ss_pred             ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            1124488888877653       35899999999999998532211122222222222211         1225899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCC
Q 025908          198 AFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      +++.++.++  ...++.+.+.++
T Consensus       224 ~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        224 AIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHhhcChhhcCccCcEEecCCC
Confidence            999988653  235667777664

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.4e-14  Score=110.99  Aligned_cols=194  Identities=15%  Similarity=0.134  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+..+......     +......++.++.+|+.+++++.+++++     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAA-----ALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999887654221110     0111124688999999999998888764     36999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +..++++++    .  +..++|++||...+...           .....|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y  156 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----------PKLGAY  156 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----------CCcchH
Confidence            9999986421                    122233332    1  34589999986653221           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...|.+++       ..+++++.++|+.+..+.........+........         ....+++++|+|++++.
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDDVAGAVLF  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHHHHHHHHH
Confidence             78888887664       35789999999988776421110011222222211         12346779999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..+  ...|+.+.+.++.
T Consensus       228 l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        228 LLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HhCccccCccCcEEEECCCc
Confidence            99753  3467888888864

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.5e-14  Score=109.20  Aligned_cols=194  Identities=21%  Similarity=0.265  Sum_probs=122.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|+++.|+.......+.    ........++.++.+|+++.+++.+++++     .++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELV----AEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888776543111110    11111235688999999999988888864     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |||+++....                    +..++++++    ....++|++||...+..           ..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~  155 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-----------LPGYGPYAA  155 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-----------CCCCchhHH
Confidence            9999986321                    122233332    23358999998665321           1122334 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|..++.+++       ..+++++.++|+.+..+.............+....+.         ..+.+.+|+++++..++
T Consensus       156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLA  226 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHc
Confidence            8988887764       2478999999998776531111111222222222221         12345799999999988


Q ss_pred             cCCC--CCCeeEEeeCC
Q 025908          204 GNEK--ASRQVFNISGE  218 (246)
Q Consensus       204 ~~~~--~~~~~~~~~~~  218 (246)
                      ..+.  ..++.+++.++
T Consensus       227 ~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CccccCccccEEEeCCC
Confidence            6542  35677877764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.63  E-value=9.5e-15  Score=112.41  Aligned_cols=193  Identities=18%  Similarity=0.184  Sum_probs=125.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+. +..     ........++.++.+|+++++++..++++     .++|+
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-----EELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999987652 111     11111235688999999999988887764     26899


Q ss_pred             EEecCCCCcc-------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD-------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~-------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |||++|....                   +...+.++    ++ ...+++++||...+.+           ..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~  155 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----------QGGTSGYAA  155 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----------CCCCchhHH
Confidence            9999985321                   11122222    22 3468999998766421           1122345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHH------HHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW------FFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      +|...|.+++       ..+++++.++|+.++++.... +...      .......  ..+.      ...+++++|+|+
T Consensus       156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~dva~  226 (258)
T PRK08628        156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN-WIATFDDPEAKLAAITA--KIPL------GHRMTTAEEIAD  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH-HhhhccCHHHHHHHHHh--cCCc------cccCCCHHHHHH
Confidence            8999887764       357999999999999874111 0000      0001100  0110      013677899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...++.+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHhChhhccccCceEEecCCc
Confidence            999999654  3456777777664

>PRK08324 short chain dehydrogenase; Validated

Probab=99.62  E-value=5.5e-15  Score=127.85  Aligned_cols=202  Identities=15%  Similarity=0.135  Sum_probs=131.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||.++++.|.++|++|++++|+.........     .... ..++..+.+|+++.+++.+++++.     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998755221110     0000 137889999999999888777532     6999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||++|....                    +...++++    ++  + ..+||++||...+...           .....
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----------~~~~~  570 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----------PNFGA  570 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------CCcHH
Confidence            9999985321                    12334333    22  3 2689999987664221           11223


Q ss_pred             c-ccHHHHHHHHHh-------cCCceEEeecceee-CCCCCCchHHHHHHHH-HhCCCc----ccCCCCCceeeeeeHHH
Q 025908          129 H-KGKLNTESVLES-------KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRL-KAGRPI----PIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       129 ~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~-g~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~i~~~D  194 (246)
                      | .+|...+.+++.       .++++++++|+.+| ++.......  ..... ..+...    .....+.....+++++|
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEW--IEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchh--hhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            4 889998887642       46999999999998 543211110  00011 011110    01223344567899999


Q ss_pred             HHHHHHHHhc--CCCCCCeeEEeeCCeee
Q 025908          195 LARAFVQVLG--NEKASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~--~~~~~~~~~~~~~~~~~  221 (246)
                      +|++++.++.  .....+.++++.++...
T Consensus       649 vA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        649 VAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            9999999984  34456889999988653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.61  E-value=3.7e-14  Score=107.82  Aligned_cols=193  Identities=20%  Similarity=0.249  Sum_probs=121.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      ||++|++|.++++.|+++|++|++++|+.......+.    .........+.++.+|++|.+++.+++++     ..+|+
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV----EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999987532111110    01111123578899999999988887753     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC------CCceEEEEeecce-eccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +...+++++.      +.++|+++||... ++..           ....|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------~~~~y  148 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------GQANY  148 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------CCchh
Confidence            9999986421                    1223444332      4568999998654 3321           11123


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.+++       ..++.++++||+.+.++... .....+...+....+.         ..+.+++|++++++.
T Consensus       149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  218 (239)
T TIGR01830       149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-KLSEKVKKKILSQIPL---------GRFGTPEEVANAVAF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-hcChHHHHHHHhcCCc---------CCCcCHHHHHHHHHH
Confidence            377877665542       35899999999987665311 1111122222222111         125578999999998


Q ss_pred             HhcCC--CCCCeeEEeeCC
Q 025908          202 VLGNE--KASRQVFNISGE  218 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~  218 (246)
                      ++..+  ...+++|++.++
T Consensus       219 ~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       219 LASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HhCcccCCcCCCEEEeCCC
Confidence            88543  346789998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.5e-14  Score=110.92  Aligned_cols=209  Identities=14%  Similarity=0.128  Sum_probs=127.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|.++|++|++..|+.....+..     .+.......+..+.+|++|.+++.+++++.     ++|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865432111     011111235778999999999988877642     5899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC-----C-C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~-----~-~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +...+++++     + + ..++|++||...+.+           ..+...
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----------NAGLGA  155 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----------CCCCch
Confidence            9999986311                    122333332     1 2 468999998776522           122233


Q ss_pred             c-ccHHHHHHH----HH---hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESV----LE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~----~~---~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|..++.+    ..   ..++++++++|+.+.++..... .................+......++++++|+|+.++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence            4 788764433    22   3589999999999877632111 0000000001111112233233457899999999999


Q ss_pred             HHhcCCCCCCeeEEeeCCeeecHHHHHHHHHH
Q 025908          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (246)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~  232 (246)
                      ..+.++    +.|.+.++  .....+.+...+
T Consensus       235 ~ai~~~----~~~~~~~~--~~~~~~~~~~~~  260 (275)
T PRK05876        235 DAILAN----RLYVLPHA--ASRASIRRRFER  260 (275)
T ss_pred             HHHHcC----CeEEecCh--hhHHHHHHHHHH
Confidence            999754    34545432  344444444444

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.61  E-value=5.1e-14  Score=107.47  Aligned_cols=195  Identities=18%  Similarity=0.236  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|.++|++|+++.|+.......+.    .........+.++.+|+.+.+.+.+++++     .++|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998542111000    00001124688999999999888877753     25899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +    ++.+++.++  +..++|++||...+....           ....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~Y  152 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-----------GQTNY  152 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-----------CChHH
Confidence            9999986321                    1    122344443  567999999876653211           11234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       ..++++++++|+.+.++.... .............+.         ..+..++|+++++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~  222 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIPM---------KRLGTPEEIAAAVAF  222 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             78887766543       357999999999988874221 111122222222221         124458999999998


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++...  ...|+.+++.++..
T Consensus       223 l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        223 LVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HcCccccCccCcEEEECCCee
Confidence            88543  34688999998864

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.3e-14  Score=108.78  Aligned_cols=196  Identities=16%  Similarity=0.171  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|........+.    .........+.++.+|++|.+++.+++++     .++|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988775432111110    00001124688899999999988887753     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCC-Cc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~  128 (246)
                      |||+++....                    +...+++++    .  ...++|+++|...+..            .|. ..
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------------~p~~~~  158 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------------NPDFLS  158 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------------CCCchH
Confidence            9999985211                    122333332    2  2357777776544321            111 23


Q ss_pred             c-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      | .+|..+|.+.+.      .+++++.++|+.+..+....  ...+ .......+.   +      ...+++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~~---~------~~~~~~d~a~~~~~  226 (258)
T PRK09134        159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATPL---G------RGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCCC---C------CCcCHHHHHHHHHH
Confidence            4 899888776542      24889999999887643211  1111 111111111   1      13568999999999


Q ss_pred             HhcCCCCCCeeEEeeCCeeecHH
Q 025908          202 VLGNEKASRQVFNISGEKYVTFD  224 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~  224 (246)
                      +++++...++.|.+.++..+++.
T Consensus       227 ~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HhcCCCcCCCEEEECCCeecccc
Confidence            99887667889999988765554

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.4e-14  Score=112.39  Aligned_cols=168  Identities=18%  Similarity=0.139  Sum_probs=113.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||||.||+++++.|+++|++|++++|++++.......         ...+.++.+|+++++++.+++++     .++|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAAE---------LGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---------hccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976552211110         12578899999999888776653     26899


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC-c
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-R  128 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~  128 (246)
                      +||++|.....                        ++.++..+.  +..++|++||...+...           .... |
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  150 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PGMATY  150 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CCCcch
Confidence            99999863211                        122333333  56689999987664211           1122 3


Q ss_pred             cccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.+.       +..|+++++++|+.+..+..             .+..      ......+++.+|+|+.++.
T Consensus       151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------------~~~~------~~~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------------AGTG------GAKGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------------cccc------cccCCCCCCHHHHHHHHHH
Confidence            37887665443       34689999999998755421             0000      0112346889999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++.++.
T Consensus       212 ~l~~~~  217 (273)
T PRK07825        212 TVAKPR  217 (273)
T ss_pred             HHhCCC
Confidence            998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1e-14  Score=112.55  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=118.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|++|.++++.|++.|++|++++|+..+.....     ........++.++.+|+.|.+.+.+++++.     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111     001111346888999999999888877642     6899


Q ss_pred             EEecCCCCcc---------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                     +..++++++    . +..++|++||...+...           .+...|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  150 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTRSGY  150 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCccHH
Confidence            9999985321                     112233332    2 45689999987765321           122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...|.+.+       ..+++++.++|+.+..+....     ...  ..+....  ..+.....+++++|+|+++..
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-----~~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR-----ALD--GDGKPLG--KSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh-----hcc--ccccccc--cccccccCCCCHHHHHHHHHH
Confidence             88988887653       358999999999887763211     000  0111111  111122368999999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++...
T Consensus       222 ~~~~~  226 (263)
T PRK06181        222 AIARR  226 (263)
T ss_pred             HhhCC
Confidence            99753

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.2e-13  Score=106.48  Aligned_cols=190  Identities=17%  Similarity=0.207  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|++++|+....   .           ...+.++.+|+.|.+++.+++++     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541   1           24678899999999887766542     26899


Q ss_pred             EEecCCCCcc----------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |||++|....                      +.    +.++..+.  +..++|++||...+...          ..+..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTT  150 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcc
Confidence            9999984210                      11    22233333  44689999987654210          11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHH-----------HHHHHhC-CCcccCCCCCcee
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-----------FHRLKAG-RPIPIPGSGIQVT  187 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~  187 (246)
                      .| .+|..++.+++       ..+++++.++|+.+.++.... ....+           ...+... ...+       ..
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~  222 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIP-------LG  222 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccCc-------cC
Confidence            34 88988887653       358999999999998874211 00000           0000000 0011       11


Q ss_pred             eeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      .+..++|+++++..++...  ...++.+.+.++...+
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            2456899999999999653  3467888888876543

>PRK06196 oxidoreductase; Provisional

Probab=99.60  E-value=3.7e-14  Score=112.24  Aligned_cols=191  Identities=20%  Similarity=0.114  Sum_probs=117.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+..+....         ..++.++.+|++|.+++.+++++     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---------IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---------hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            79999999999999999999999999986553211110         13478899999999988877753     36999


Q ss_pred             EEecCCCCcc------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCC-CCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~-~~~e~~~~~~~~~~-  129 (246)
                      +||++|....                  +    ++.++.++.  +..++|++||.......... ......+..+...| 
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            9999985311                  1    233444443  34699999986543211100 00001122233335 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHH-HHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       ..+++++.++||.+.++........... .........++ .     ..+.+++|.|..++.
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~a~~~~~  256 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI-D-----PGFKTPAQGAATQVW  256 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh-h-----hhcCCHhHHHHHHHH
Confidence            88998876642       3589999999999998742211000000 00000000000 0     013468999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++..+
T Consensus       257 l~~~~  261 (315)
T PRK06196        257 AATSP  261 (315)
T ss_pred             HhcCC
Confidence            98654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.60  E-value=1.7e-13  Score=105.41  Aligned_cols=186  Identities=15%  Similarity=0.135  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+...                ...+..+.+|++|++++.+++++     .++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987654                24678899999999888877753     26999


Q ss_pred             EEecCCCCcc--------------------chHHHH----HhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++    ..+.  +..++|++||...+..           ..+...|
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  144 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----------TRNAAAY  144 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----------CCCCchh
Confidence            9999986311                    112223    3332  4578999999766422           1122334


Q ss_pred             -ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCc------hHHH-HHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP------VEEW-FFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                       .+|...+.+.+.      .+++++.++|+.+..+.....      .... .......      +........+..++|+
T Consensus       145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~ev  218 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEV  218 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHH
Confidence             889998887642      248899999998766521000      0000 0000000      0000011235568999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      |+++++++...  ...+..+.+.++.
T Consensus       219 a~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        219 AYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHcCcccCCCCCcEEEECCcc
Confidence            99999998653  3367778787764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.8e-14  Score=108.88  Aligned_cols=193  Identities=16%  Similarity=0.163  Sum_probs=124.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+.... .....     .  ....+..+.+|+.+++++..++++.     ++|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~-----~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQ-----L--LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-----h--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999976431 10000     0  0235678999999999888777532     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +...+++++    .  +..++|++||........          ....|.
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  162 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------RHVAYC  162 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------CCchHH
Confidence            9999986321                    122333332    2  456899999876431110          111233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.++|+.+..+.....+...........  .+       ...+.+++|++++++.+
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL--IP-------AGRFAYPEEIAAAALFL  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc--CC-------CCCCcCHHHHHHHHHHH
Confidence            88888776653       2589999999999877642211111111111111  11       12366899999999999


Q ss_pred             hcCC--CCCCeeEEeeCCee
Q 025908          203 LGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~~  220 (246)
                      +..+  ...|+++.+.++..
T Consensus       234 ~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        234 ASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             cCccccCccCCEEEECCCcc
Confidence            9654  33678888888754

>PRK06194 hypothetical protein; Provisional

Probab=99.60  E-value=1.7e-14  Score=112.73  Aligned_cols=140  Identities=16%  Similarity=0.186  Sum_probs=92.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.........     +......++.++.+|++|.+++.++++..     ++|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVA-----ELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987544211110     00111235778999999999988887632     5899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C------CceEEEEeecceeccCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                      |||++|....                    +..+++++    +.  .      ..++|++||...+...           
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  155 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----------  155 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------
Confidence            9999987321                    12222221    21  1      2589999997765321           


Q ss_pred             CCCCcc-ccHHHHHHHHHh---------cCCceEEeecceeeC
Q 025908          124 DPKSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYG  156 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~~---------~~~~~~ilR~~~i~g  156 (246)
                      .+...| .+|...|.+++.         .++++..+.|+.+..
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t  198 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPT  198 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccC
Confidence            112334 889998877632         236666777776644

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.3e-13  Score=105.84  Aligned_cols=197  Identities=13%  Similarity=0.169  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+.........    ........++..+.+|+.|++++.+++++     .++|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETA----EHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987643111110    01111124678899999999888877763     25799


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +.    +.++..+.  +..++|++||...+....         ..+...|
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~Y  160 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNR---------GLLQAHY  160 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC---------CCCcchH
Confidence            9999986321                    11    22233333  446899999866432111         0012234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|+++++++|+.+.++..................++         ..+..++|+++.++.
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~  231 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVF  231 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88888777653       3589999999999888742211111111111111111         124458999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.+.  ...|+++.+.++.
T Consensus       232 l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        232 LLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HcCccccCcCCceEEECcCE
Confidence            98643  3467788887764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.60  E-value=7.6e-14  Score=107.21  Aligned_cols=191  Identities=17%  Similarity=0.195  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+.......+.          ..++.++.+|++|++++.+++++     .++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988776543221111          12578899999999988888764     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..++  +..++|++||...++..          ......|
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y  152 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----------AEGTTFY  152 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----------CCCccHh
Confidence            9999986321                    1    233344443  45689999997765321          1112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                       .+|...+.+.+       ..+++++.++|+.+-.+....    .....+........+         ...+..++|+++
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~  223 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTGKPEDIAN  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCcCHHHHHH
Confidence             88988887653       257999999999876542110    000011111111111         122456899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCee
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +++.++...  ...|..+.+.++..
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCee
Confidence            999998653  34678888888753

>PRK05717 oxidoreductase; Validated

Probab=99.60  E-value=4.3e-14  Score=108.56  Aligned_cols=192  Identities=15%  Similarity=0.132  Sum_probs=122.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+..+.....        ......+.++.+|+++.+++.+++++     .++|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA--------KALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999988754421110        01124678899999998887666543     15899


Q ss_pred             EEecCCCCcc----------------------chHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD----------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                      +...+++++.     ...++|++||...+....          ....|
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------~~~~Y  157 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------DTEAY  157 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------CCcch
Confidence            9999986321                      1233444432     345799999876542211          11224


Q ss_pred             cccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          129 HKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       129 ~~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      ..+|..++.+.+.      .+++++.++|+.+.++.........+.... ... .+       ...+.+++|++.++..+
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~-~~~-~~-------~~~~~~~~~va~~~~~l  228 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEAD-HAQ-HP-------AGRVGTVEDVAAMVAWL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHH-hhc-CC-------CCCCcCHHHHHHHHHHH
Confidence            4899988877642      358999999999988742211111111110 111 11       11356789999999988


Q ss_pred             hcCC--CCCCeeEEeeCCe
Q 025908          203 LGNE--KASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~  219 (246)
                      +...  ...++.+.+.++.
T Consensus       229 ~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        229 LSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             cCchhcCccCcEEEECCCc
Confidence            8643  2357778777764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.60  E-value=2.7e-14  Score=109.93  Aligned_cols=197  Identities=16%  Similarity=0.185  Sum_probs=125.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+.++......     ........+.++.+|++|++++.+++++     .++|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA-----HLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999997654211110     0111124677899999999988766653     26899


Q ss_pred             EEecCCCCc--------------------cchHHHHHhC-----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~--------------------~~~~~l~~a~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++...                    .+..++++++     .  +..+||++||...+.....       ...+...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~~~~~  165 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVMDTIA  165 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cccCcch
Confidence            999998521                    1123344432     2  4568999999765432211       0012234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...|.+++       ..+++++.++|+.+-.+... .....+........++..         +...+|+++.+.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-GTLERLGEDLLAHTPLGR---------LGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-hhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHH
Confidence            4 88988887764       24799999999988665321 122233333333333222         234799999998


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...|..+.+.++.
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        236 LLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHhCccccCccCCEEEECCCe
Confidence            888543  3357777777653

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.7e-14  Score=107.94  Aligned_cols=189  Identities=20%  Similarity=0.232  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|++|++++|+.....+...        .....+.++.+|+.+.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAARA--------ELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH--------HhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987544211110        1124577889999998776665542     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----CCCceEEEEeecc-eeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+++....                    +...+++++    +...++|++||.. .++.            .....| 
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------~~~~~Y~  151 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------PNSSVYA  151 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------------CCccHHH
Confidence            9999985321                    123344443    2234677777644 3321            112344 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .+|...|.+++       ..+++++++||+.+++|...     ......+........++.         -+.+.+|+++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~  222 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAK  222 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            88999888773       24899999999999987311     111112222222222221         1346899999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCC
Q 025908          198 AFVQVLGNEK--ASRQVFNISGE  218 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~  218 (246)
                      ++..++....  ..+..+.+.++
T Consensus       223 ~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        223 AVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHcCccccCccCCeEEECCC
Confidence            9999886432  34556666655

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2e-14  Score=110.51  Aligned_cols=189  Identities=14%  Similarity=0.065  Sum_probs=116.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|.+|+++++.|++.|++|++++|+...... +.    ........++.++.+|+.|++++.+++. .++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LR----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence            7999999999999999999999999997544211 00    0001112468889999999999988875 3899999999


Q ss_pred             CCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHH
Q 025908           81 GREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (246)
Q Consensus        81 ~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (246)
                      +....                    +    .+.++..+.  +.+++|++||...+...          .....|..+|..
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------~~~~~Y~~sK~a  151 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------PFTGAYCASKHA  151 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------CCcchhHHHHHH
Confidence            85321                    1    122334333  55799999986543110          111223488988


Q ss_pred             HHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          135 TESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       135 ~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      +|.+.       +..+++++++||+.+..+... .....+........ .+.. .+.....+.++.+|+++.++.++..+
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFND-TMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchh-hhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCC
Confidence            88654       246899999999976543211 00110100000000 0111 11122345678999999999988765


Q ss_pred             C
Q 025908          207 K  207 (246)
Q Consensus       207 ~  207 (246)
                      .
T Consensus       230 ~  230 (257)
T PRK09291        230 T  230 (257)
T ss_pred             C
Confidence            3

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=9.1e-14  Score=106.62  Aligned_cols=192  Identities=15%  Similarity=0.189  Sum_probs=123.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----C-cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G-FD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~-~d   74 (246)
                      |||+|+||+++++.|+++|++|+++.++.......+.       .....++.++.+|+.+++++.+++++.     . +|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999887664322111110       011246888999999999888877642     2 89


Q ss_pred             EEEecCCCCc--------------------------cchHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           75 VVYDINGREA--------------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        75 ~vi~~~~~~~--------------------------~~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                      ++||+++...                          .+...+++++    .  +..+++++||....           .+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------NP  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------CC
Confidence            9999987420                          0122233332    2  45689999975432           12


Q ss_pred             CCCCCcc-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      ..+...| .+|...|.+++.       .+++++.++||.+..+..................+  .       ..+.+++|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~  223 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP--L-------RKVTTPQE  223 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC--c-------CCCCCHHH
Confidence            2233345 899999887742       47899999999887653211111112222222111  1       23677999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++..++..+  ...|+.+.+.++.
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        224 FADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            999999999643  4467888888764

>PRK08017 oxidoreductase; Provisional

Probab=99.58  E-value=3.4e-14  Score=109.17  Aligned_cols=177  Identities=15%  Similarity=0.132  Sum_probs=116.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|+||.++++.|.++|++|++++|+..+... +.          ..++..+.+|+.+.+++.++++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MN----------SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HH----------hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            7999999999999999999999999998655211 11          13578899999998877666542      2578


Q ss_pred             EEEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      .++|+++.....                        .+.+++++.  +..++|++||...+..           ......
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  145 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----------TPGRGA  145 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----------CCCccH
Confidence            999998863210                        112345544  5678999998644311           111223


Q ss_pred             c-ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...|.+.       ...+++++++||+.+..+..         ....... ......++.....+++.+|+++.+
T Consensus       146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT---------DNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh---------hcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            4 8898888754       34689999999987655421         1110110 111112222334578999999999


Q ss_pred             HHHhcCCCC
Q 025908          200 VQVLGNEKA  208 (246)
Q Consensus       200 ~~~~~~~~~  208 (246)
                      ..+++++..
T Consensus       217 ~~~~~~~~~  225 (256)
T PRK08017        217 RHALESPKP  225 (256)
T ss_pred             HHHHhCCCC
Confidence            999987653

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5.7e-14  Score=106.69  Aligned_cols=184  Identities=18%  Similarity=0.192  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|++.+.......     ... ..++.++.+|+.+.+++.+++++     .++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-----l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAE-----LNN-KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHH-----Hhc-cCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999986542211110     000 14688899999999888877763     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      |||+++....                    +...++++    +. +..++|++||...+..           ......| 
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----------FAGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----------CCCCchHH
Confidence            9999876321                    11123333    22 4568999998665321           1122234 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.+||+.+.++....             ..    ..  .....+..+|+++.++.+
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------~~----~~--~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------TP----SE--KDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------------cc----ch--hhhccCCHHHHHHHHHHH
Confidence            77876665443       368999999999887653111             00    00  001136789999999999


Q ss_pred             hcCCC-CCCeeEEeeCCee
Q 025908          203 LGNEK-ASRQVFNISGEKY  220 (246)
Q Consensus       203 ~~~~~-~~~~~~~~~~~~~  220 (246)
                      +..+. .......+..+++
T Consensus       216 l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HhCCccccccceEEecCCC
Confidence            97653 2334455555443

>PRK07985 oxidoreductase; Provisional

Probab=99.57  E-value=1.4e-13  Score=107.81  Aligned_cols=196  Identities=20%  Similarity=0.244  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|.||.++++.|+++|++|++..|+.+.. .+.+.    .........+.++.+|+++.+++.+++++     .++|
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999877654321 11110    00011124577899999999888777653     2589


Q ss_pred             EEEecCCCCcc---------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      ++||+++....                     +...+++++    +...++|++||...+.....          ...|.
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------~~~Y~  200 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------LLDYA  200 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC----------cchhH
Confidence            99999985210                     122233332    22358999999877532111          11244


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+++       ..|++++.++|+.+.++.... ..............+.         ..+...+|+|++++.
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~pedva~~~~f  271 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCCHHHHHHHHHh
Confidence            88998887653       358999999999999884211 0011111111111111         124468999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++...  ...+.++.+.++.
T Consensus       272 L~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhChhcCCccccEEeeCCCe
Confidence            98653  3457888888775

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.2e-14  Score=109.53  Aligned_cols=187  Identities=18%  Similarity=0.121  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|.++|++|++++|+..+...             ..+++++.+|++|++++.++++.     ..+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998655211             24688999999999999888864     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++++    ++  +.+++|++||...+....          ....|.
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y~  146 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP----------YMALYA  146 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC----------CccHHH
Confidence            9999986321                    12223333    33  578999999876542211          111244


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-----hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .+|...|.+.+       +.++++++++|+.+.++.....     ....+ ..... .......  .........+|+|+
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~--~~~~~~~~~~~va~  222 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERA-VVSKAVA--KAVKKADAPEVVAD  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHH-HHHHHHH--hccccCCCHHHHHH
Confidence            88988887653       4689999999999888642111     00000 00000 0000000  00112356899999


Q ss_pred             HHHHHhcCCCCCCeeEEe
Q 025908          198 AFVQVLGNEKASRQVFNI  215 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~  215 (246)
                      .++.++..+.. ...|..
T Consensus       223 ~~~~~~~~~~~-~~~~~~  239 (270)
T PRK06179        223 TVVKAALGPWP-KMRYTA  239 (270)
T ss_pred             HHHHHHcCCCC-CeeEec
Confidence            99999976542 345544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.57  E-value=9.8e-14  Score=99.85  Aligned_cols=185  Identities=19%  Similarity=0.230  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      .|++||.|.++++.....++.|-.+.|+..+.....+          ...+.+..+|....+-+...+.  ++..++.++
T Consensus        58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw----------~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~  125 (283)
T KOG4288|consen   58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSW----------PTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM  125 (283)
T ss_pred             hcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCC----------CcccchhhccccccCcchhhhc--CCcccHHHh
Confidence            3899999999999999999999999999776322222          4678888888776555555565  788888776


Q ss_pred             CCC----------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHH-HhcCCceE
Q 025908           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT  147 (246)
Q Consensus        81 ~~~----------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~-~~~~~~~~  147 (246)
                      +..          .....+..++++  ++++|+|+|... ||         -.+..|..|+..|+++|..+ +.++.+-+
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~---------~~~~i~rGY~~gKR~AE~Ell~~~~~rgi  195 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FG---------LPPLIPRGYIEGKREAEAELLKKFRFRGI  195 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cC---------CCCccchhhhccchHHHHHHHHhcCCCce
Confidence            642          112233344443  899999999532 21         12445667889999999766 56789999


Q ss_pred             EeecceeeCCCCCCc------hHHHHHHHHHhCC-----CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          148 SLRPVYIYGPLNYNP------VEEWFFHRLKAGR-----PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       148 ilR~~~i~g~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      ++|||.+||...-.+      .....+.+..+..     .+++.++  -...++..+++|.+.+.+++++.-.
T Consensus       196 ilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~--l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  196 ILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGP--LLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             eeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccc--ccCCCcCHHHHHHHHHHhccCCCcC
Confidence            999999999742211      1112233332222     2444443  5678999999999999999988654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=8.8e-14  Score=105.82  Aligned_cols=173  Identities=21%  Similarity=0.240  Sum_probs=115.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|+..+.....     .+......++.++.+|+++++++.++++.     .++|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            699999999999999999999999999865421111     11111234688899999999998888763     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++    .  +.+++|++||...+...           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y  156 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVTSAY  156 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCCcch
Confidence            9999986421                    111233332    1  45789999987654221           122234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       +.+++++.+||+.+.++.....           .  ... .   ....++..+|+|+.+..
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~--~~~-~---~~~~~~~~~~~a~~~~~  219 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------G--LTD-G---NPDKVMQPEDLAEFIVA  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------c--ccc-c---CCCCCCCHHHHHHHHHH
Confidence             77877766542       3689999999999877631100           0  000 1   11245789999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++.++
T Consensus       220 ~l~~~  224 (239)
T PRK07666        220 QLKLN  224 (239)
T ss_pred             HHhCC
Confidence            99875

>PLN02253 xanthoxin dehydrogenase

Probab=99.57  E-value=2.4e-14  Score=111.49  Aligned_cols=200  Identities=17%  Similarity=0.129  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.....+....     . ....++.++.+|++|.+++.++++.     .++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS-----L-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-----h-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999875442111100     0 0024688999999999988887763     26999


Q ss_pred             EEecCCCCcc----------------------chHHHHHhCC------CCceEEEEeecce-eccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------EVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~~~l~~a~~------~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~  126 (246)
                      +||++|....                      +...+++++.      +..+++++||... ++.           ..+.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~  166 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------LGPH  166 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------CCCc
Confidence            9999986311                      1122333321      3357888887554 211           1122


Q ss_pred             CccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-----HHHHHHHHHh--CCCcccCCCCCceeeeeeH
Q 025908          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKA--GRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~  192 (246)
                      .|..+|...|.+.+       ..++++..++|+.+.++......     ....+.....  ....++      ....+++
T Consensus       167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~  240 (280)
T PLN02253        167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL------KGVELTV  240 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC------cCCCCCH
Confidence            34489999988764       24799999999998776311100     0001100000  000000      0124679


Q ss_pred             HHHHHHHHHHhcCC--CCCCeeEEeeCCeeecH
Q 025908          193 KDLARAFVQVLGNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      +|+|+++..++...  ...+..+++.++...+.
T Consensus       241 ~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             HHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            99999999998643  33578888888754443

>PRK12742 oxidoreductase; Provisional

Probab=99.57  E-value=3.1e-13  Score=102.66  Aligned_cols=188  Identities=18%  Similarity=0.198  Sum_probs=118.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|.||+++++.|+++|++|+++.|+.....+.+..         ..++..+.+|++|.+++.+++++. ++|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---------ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---------HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            79999999999999999999998876643221111100         124677889999998888887643 48999999


Q ss_pred             CCCCccc--------------------hHHHH----HhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           80 NGREADE--------------------VEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        80 ~~~~~~~--------------------~~~l~----~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      ++.....                    ...++    ..++...++|++||....          ..+..+...| .+|..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCcchHHhHHH
Confidence            9863210                    11121    222234689999986541          0122223344 89999


Q ss_pred             HHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 025908          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  206 (246)
Q Consensus       135 ~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-  206 (246)
                      .|.+++       ..+++++.++|+.+..+..... .. .........+.         ..+.+++|+++++..++... 
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~-~~~~~~~~~~~---------~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GP-MKDMMHSFMAI---------KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cH-HHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccc
Confidence            987663       3579999999999877642211 11 11111111111         12457899999999998653 


Q ss_pred             -CCCCeeEEeeCC
Q 025908          207 -KASRQVFNISGE  218 (246)
Q Consensus       207 -~~~~~~~~~~~~  218 (246)
                       ...|..+.+.++
T Consensus       222 ~~~~G~~~~~dgg  234 (237)
T PRK12742        222 SFVTGAMHTIDGA  234 (237)
T ss_pred             CcccCCEEEeCCC
Confidence             235677777665

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=1.2e-13  Score=105.84  Aligned_cols=192  Identities=15%  Similarity=0.229  Sum_probs=125.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|..+++.|+++|++|++++|+..+......     +......++..+.+|+.+.+++.++++.     ..+|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVA-----ECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999988654221111     0111124678899999998888776653     25899


Q ss_pred             EEecCCCCcc-----------------------------ch----HHHHHhCC---CCceEEEEeecceeccCCCCCCCC
Q 025908           76 VYDINGREAD-----------------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (246)
Q Consensus        76 vi~~~~~~~~-----------------------------~~----~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e  119 (246)
                      |||+++....                             +.    +.++..+.   ...+++++||...++..       
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-------  158 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-------  158 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-------
Confidence            9999984211                             00    11112221   22468888887665321       


Q ss_pred             CCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                           +...| .+|...+.+++       ..+++++.++|+.+.++.... ..+..........+.         ..+.+
T Consensus       159 -----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~  223 (253)
T PRK08217        159 -----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGE  223 (253)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcC
Confidence                 12234 88988877653       358999999999998874321 122222332222221         12457


Q ss_pred             HHHHHHHHHHHhcCCCCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNEKASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~  219 (246)
                      .+|+++++..++......++++++.++.
T Consensus       224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        224 PEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            8999999999997655578899998864

>PRK12743 oxidoreductase; Provisional

Probab=99.56  E-value=2.8e-13  Score=104.11  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=122.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+.......+.    .........+.++.+|+++++++..++++     ..+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999988765443211110    01111234688999999999888777753     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC-------CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                    +...+++++.       +..++|++||....           .+..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~~~~  152 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLPGASA  152 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCCCcch
Confidence            9999986321                    1222333321       13589999986432           12222334


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+++       ..+++++.++|+.+.++..... ............+.   +      .+.+++|+++++.
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~---~------~~~~~~dva~~~~  222 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIPL---G------RPGDTHEIASLVA  222 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCCC---C------CCCCHHHHHHHHH
Confidence            4 88888877653       3579999999999998742111 01111111111111   1      1346899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCee
Q 025908          201 QVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      .++...  ...+.++.+.++..
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HHhCccccCcCCcEEEECCCcc
Confidence            988653  23577888888754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.56  E-value=2.3e-13  Score=104.13  Aligned_cols=195  Identities=16%  Similarity=0.159  Sum_probs=117.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||..+++.|+++|++|+++.++.........    ........++.++.+|+.+++++.+++++     .++|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA----DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999877654322111100    01111134688999999999888777653     26899


Q ss_pred             EEecCCCCcc---------------------chHHHHHh-CC--C------CceEEEEeeccee-ccCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------EVEPILDA-LP--N------LEQFIYCSSAGVY-LKSDLLPHCETDTVD  124 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a-~~--~------~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~  124 (246)
                      +||++|....                     +...++++ +.  .      ..++|++||...+ +...          .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------~  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN----------E  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC----------C
Confidence            9999985321                     11122222 11  1      2359999986543 2110          0


Q ss_pred             CCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...|..+|...+.+.+       ..+++++++||+.+..+...............  ...+.       ..+..++|+++
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~e~va~  224 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLG--AQTPL-------GRAGEADEVAE  224 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHh--hcCCC-------CCCcCHHHHHH
Confidence            1124488988876542       34799999999999887421110111111111  11111       11356899999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCC
Q 025908          198 AFVQVLGNEK--ASRQVFNISGE  218 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~  218 (246)
                      .++.++.++.  ..|+.+.+.++
T Consensus       225 ~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        225 TIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHcCccccCcCCceEeeCCC
Confidence            9999987643  46777776654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.56  E-value=2.4e-13  Score=104.00  Aligned_cols=193  Identities=17%  Similarity=0.167  Sum_probs=123.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+......       .........+..+.+|+++.+++.+++++     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQ-------QQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHH-------HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999986422100       01111134688999999999988877753     26999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC-----C-C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~-----~-~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                    +...+++++     + + ..++|++||...+.+...          ...|
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y  153 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR----------VPSY  153 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC----------Cchh
Confidence            9999986321                    111233322     1 2 468999999877643211          1124


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ..+|...+.+.+       ..+++++.++|+.+..+...... ..........  ..+       ...++.++|+|++++
T Consensus       154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~~~  224 (248)
T TIGR01832       154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE--RIP-------AGRWGTPDDIGGPAV  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh--cCC-------CCCCcCHHHHHHHHH
Confidence            488988887653       24899999999998876421100 0000001111  111       135778999999999


Q ss_pred             HHhcCCC--CCCeeEEeeCCe
Q 025908          201 QVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (246)
                      .++....  ..|.++.+.++.
T Consensus       225 ~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       225 FLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             HHcCccccCcCCcEEEeCCCE
Confidence            9996532  346666666653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.2e-13  Score=106.32  Aligned_cols=205  Identities=13%  Similarity=0.098  Sum_probs=120.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.++..+..+.... ...........+.++.+|+++++++.++++.     .++|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            69999999999999999999988887764331111110 0001111124688899999999998887763     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcccc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      +||+++....                    +...+++++    +...++++++|..+...          ......|..+
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~----------~~~~~~Y~~s  162 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF----------TPFYSAYAGS  162 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc----------CCCcccchhh
Confidence            9999986211                    112233332    22346666643332111          0111234489


Q ss_pred             HHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          132 KLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       132 k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      |...|.+++.       .+++++.++|+.+.++.............  ......  ........+.+++|+++++..++.
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY--HKTAAA--LSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc--cccccc--ccccccCCCCCHHHHHHHHHHhhc
Confidence            9999987742       37999999999987763211000000000  000000  000111246789999999999997


Q ss_pred             CC-CCCCeeEEeeCCee
Q 025908          205 NE-KASRQVFNISGEKY  220 (246)
Q Consensus       205 ~~-~~~~~~~~~~~~~~  220 (246)
                      .. ...++++++.++..
T Consensus       239 ~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        239 DGWWITGQTILINGGYT  255 (257)
T ss_pred             ccceeecceEeecCCcc
Confidence            53 23578888887643

>PRK07069 short chain dehydrogenase; Validated

Probab=99.56  E-value=6.9e-14  Score=107.14  Aligned_cols=195  Identities=19%  Similarity=0.213  Sum_probs=120.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|+||.++++.|+++|++|++++|+.....+.+..    .....  ...+..+.+|+.+.+++.+++++     .++
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAA----EINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH----HHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            79999999999999999999999999973221111110    00000  12345678999999988877753     268


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |+|||+++....                        .++.++.+++  +.+++|++||...+.....          ...
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~----------~~~  150 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD----------YTA  150 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC----------Cch
Confidence            999999986321                        2344555554  5679999999777532211          112


Q ss_pred             ccccHHHHHHHHHh-------c--CCceEEeecceeeCCCCCCch----HHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          128 RHKGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       128 ~~~~k~~~e~~~~~-------~--~~~~~ilR~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      |..+|...+.+++.       .  +++++.++|+.+.+|......    ............+         ...+.+++|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  221 (251)
T PRK07069        151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------LGRLGEPDD  221 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------CCCCcCHHH
Confidence            33788888776542       2  488899999998887421100    0001111111111         123456899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      ++++++.++..+  ...+..+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        222 VAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHcCccccCccCCEEEECCC
Confidence            999999987653  235566666554

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.5e-13  Score=105.68  Aligned_cols=193  Identities=16%  Similarity=0.176  Sum_probs=120.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|.++|++|+++.|+.++......     .......++.++.+|+++.+++.+++++     .++|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRA-----EIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999998655221110     0011124688999999999888887763     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--C--------CceEEEEeecceeccCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--N--------LEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~--------~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                      +||+++....                    +...+++++    .  .        ..++|++||...+..          
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  159 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----------  159 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----------
Confidence            9999985211                    112222221    1  1        258999998766421          


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                       ..+...| .+|...+.+++       ..++++++++|+.++++.....+.......+....+.         ..+...+
T Consensus       160 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~  229 (258)
T PRK06949        160 -LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPR---------KRVGKPE  229 (258)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCC---------CCCcCHH
Confidence             1112234 78888777653       2579999999999998753221111111111111111         1244479


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      |+++.+.+++...  ...|..+.+.++
T Consensus       230 ~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        230 DLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            9999999998643  245666666554

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.55  E-value=1.1e-13  Score=106.28  Aligned_cols=195  Identities=13%  Similarity=0.116  Sum_probs=125.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+.........     .......++.++.+|+++.+++.++++.     .++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVD-----EIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999887654211100     0011124577889999999888877653     26899


Q ss_pred             EEecCCCCcc-------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+++....                   +...+++++    .  +..++|++||.....           +..+...| 
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~  160 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINMTSYA  160 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCCCcchhH
Confidence            9999985311                   122333332    1  335899999866531           11122234 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+++       ..+++++.+.|+.+..+.........+........++         ..+..++|++++++.+
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l  231 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            88999888764       2578999999998876642211112222222221111         1245689999999999


Q ss_pred             hcCC--CCCCeeEEeeCCee
Q 025908          203 LGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~~  220 (246)
                      +...  ...|+.+++.++..
T Consensus       232 ~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        232 CSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             cCccccCccCCEEEECCCcc
Confidence            8653  23578888888754

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.55  E-value=9.7e-14  Score=106.98  Aligned_cols=193  Identities=13%  Similarity=0.172  Sum_probs=121.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...        .....+.++.+|+++.+++.+++++     ..+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA--------SLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211111        1124688899999999888887764     26899


Q ss_pred             EEecCCCCcc-------------------c----hHHHHHhC-CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcccc
Q 025908           76 VYDINGREAD-------------------E----VEPILDAL-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        76 vi~~~~~~~~-------------------~----~~~l~~a~-~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      +||+++....                   +    .+.++..+ ++..++|++||...+....          ....|..+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------~~~~Y~as  153 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT----------GRWLYPAS  153 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----------CCchhHHH
Confidence            9999985311                   1    11222223 2345899999866532111          01123488


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      |...+.+.+       ..+++++.++|+.+..+......  .......... ...+       ...+...+|+|++++.+
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~-~~~p-------~~r~~~p~dva~~~~~l  225 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA-PFHL-------LGRVGDPEEVAQVVAFL  225 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc-ccCC-------CCCccCHHHHHHHHHHH
Confidence            888877654       25899999999987665210000  0000000000 0000       11245689999999999


Q ss_pred             hcCC--CCCCeeEEeeCCe
Q 025908          203 LGNE--KASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~  219 (246)
                      +...  ...+..+.+.++.
T Consensus       226 ~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        226 CSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             cCccccCccCcEEEECCCe
Confidence            9753  3467788888774

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=2.4e-13  Score=104.34  Aligned_cols=194  Identities=15%  Similarity=0.143  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+..+..+...     +.......+..+.+|+.|.+++.+++++     .++|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVA-----KLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-----HHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221110     0001123577889999999888877753     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHH----hCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++    .+.  +..++|++||.....           +..+...|
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y  158 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GRDTITPY  158 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CCCCCcch
Confidence            9999986321                    1112222    222  446899999865421           11112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...+.+++       ..+++++.++|+.+.++...... ...+........++         ..+...+|+++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~va~~~~  229 (254)
T PRK08085        159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA---------ARWGDPQELIGAAV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             88998887764       35899999999999887421100 01111122111111         23556899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCe
Q 025908          201 QVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .++..  ....+.+..+.++.
T Consensus       230 ~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        230 FLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHhCccccCCcCCEEEECCCe
Confidence            98864  33467777777764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.55  E-value=5.9e-13  Score=101.09  Aligned_cols=187  Identities=14%  Similarity=0.098  Sum_probs=120.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|.++|++|+++.|+.......+.          ..++.++.+|+.+.+++.+++++.     ++|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR----------QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----------HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            7999999999999999999999999997654221111          135778999999998887777542     5899


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--C--CceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREADE------------------------VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|.....                        .+.++..+.  +  ..++|++||.......          .....
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------~~~~~  147 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------DKHIA  147 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC----------CCCcc
Confidence            99999853110                        112223332  2  3579999876542110          01112


Q ss_pred             ccccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          128 RHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       128 ~~~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      |..+|...|.+++.      .+++++.++|+.+..+....   ...........++.         -+...+|+++++..
T Consensus       148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~~  215 (236)
T PRK06483        148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVDY  215 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHHH
Confidence            44899999887642      35899999999875432111   11111111111111         12347999999999


Q ss_pred             HhcCCCCCCeeEEeeCCe
Q 025908          202 VLGNEKASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~  219 (246)
                      ++......+.++.+.++.
T Consensus       216 l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        216 LLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HhcCCCcCCcEEEeCccc
Confidence            997666678888887764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.55  E-value=4.1e-13  Score=104.48  Aligned_cols=194  Identities=14%  Similarity=0.203  Sum_probs=124.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|+++++.|+++|++|++++|+.........     +......++..+.+|+.+.+++..++++     .++|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVA-----EIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997644211110     1111124678899999999888777653     27899


Q ss_pred             EEecCCCCcc------------------------c---------------hHHHHHhCC--CCceEEEEeecceeccCCC
Q 025908           76 VYDINGREAD------------------------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDL  114 (246)
Q Consensus        76 vi~~~~~~~~------------------------~---------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~  114 (246)
                      +||+++....                        .               .+.++..+.  +..++|++||...+...  
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--  168 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL--  168 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC--
Confidence            9999984211                        0               112233332  45689999998775321  


Q ss_pred             CCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch------HHHHHHHHHhCCCcccC
Q 025908          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIP  180 (246)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~  180 (246)
                               .+...| .+|...+.+++       ..+++++.++|+.+.++......      ............+    
T Consensus       169 ---------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p----  235 (278)
T PRK08277        169 ---------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP----  235 (278)
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC----
Confidence                     122234 88998887764       24799999999999887321000      0001111111111    


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcC-C--CCCCeeEEeeCCe
Q 025908          181 GSGIQVTQLGHVKDLARAFVQVLGN-E--KASRQVFNISGEK  219 (246)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~-~--~~~~~~~~~~~~~  219 (246)
                           ...+...+|+|++++.++.. .  ...+..+.+.++.
T Consensus       236 -----~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        236 -----MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             -----ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence                 12355689999999998865 2  3467788887763

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.54  E-value=9.1e-13  Score=101.04  Aligned_cols=189  Identities=16%  Similarity=0.100  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|.++|++|++++|+....   ..          ..++.++.+|+.+++++.+++++.     ++|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976440   01          256888999999998888877532     5799


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C---CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||++|....                    +...+++++    .   +..++|++||...+.+           ......
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~~~~~~  147 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----------SPGTAA  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----------CCCCch
Confidence            9999985321                    122233332    1   2358999998765421           111233


Q ss_pred             c-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...|.+++.      ..++++.++|+.+..+...... ............+.         ..+..++|+++.++
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~~va~~~~  218 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL---------GRLATPADIAWACL  218 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC---------CCCcCHHHHHHHHH
Confidence            4 889998887642      2388899999988776311100 00111111111111         12446899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeeec
Q 025908          201 QVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      .++...  ...+..+.+.++...+
T Consensus       219 ~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        219 FLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             HHcCcccCCccCCEEEECCCcchH
Confidence            998653  3467888888876543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6.1e-13  Score=102.47  Aligned_cols=196  Identities=18%  Similarity=0.196  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|.||.++++.|+++|++|++++|+.....+...     +...  ...++.++.+|+++++++..++++     .++
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAAA-----AIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999997654221110     0000  124678899999999888877763     269


Q ss_pred             cEEEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....                    +.    +.++..+.  +..++|++||...+...           ....
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  156 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----------PGCF  156 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------CCch
Confidence            999999986321                    11    12222222  44689999987653211           1112


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-----HHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      .| .+|...+.+.+       ..|++++.++|+.+-.+.....+     ............+.         ..+..++|
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~  227 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------KRIGRPEE  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC---------CCCCCHHH
Confidence            34 88998887764       25799999999988665311000     00001111111111         12446899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +|++++.++.+.  ...|+.+.+.++...
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCeee
Confidence            999999998653  346778888877543

>PRK08643 acetoin reductase; Validated

Probab=99.54  E-value=6.1e-13  Score=102.26  Aligned_cols=198  Identities=17%  Similarity=0.278  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+..+...     +......++.++.+|+++++++.+++++     .++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAAD-----KLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654221111     1111124678899999999988877763     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                    +    ++.+++.+.   ...++|++||...+....          ....|
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y  152 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP----------ELAVY  152 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC----------CCchh
Confidence            9999986321                    0    112222222   235899999866532110          11224


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh--CCCc-----ccCCCCCceeeeeeHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-----PIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D  194 (246)
                      ..+|...+.+.+       ..|++++.++|+.+.++...     .+......  +.+.     .+... .....+...+|
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  226 (256)
T PRK08643        153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF-----DIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPED  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh-----HHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHHH
Confidence            488988876553       36899999999998776311     00000000  0000     00000 01113457899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++..++...  ...|..+.+.++.
T Consensus       227 va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        227 VANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCe
Confidence            999999998643  3567788887764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.54  E-value=3.7e-13  Score=104.24  Aligned_cols=180  Identities=13%  Similarity=0.125  Sum_probs=115.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+..+......     ........+.++.+|+++.+++.++++.     .++|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLK-----LLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987654221110     0111135688899999999888877753     26999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....+                        ++.++..+.  +..++|++||...+.+.           .....|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y  149 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------PAMSSY  149 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------CCchHH
Confidence            99999863210                        122333343  56799999987664221           112334


Q ss_pred             -ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                       .+|...+.+.       ...++++++++|+.+.++.....  ......... . ..        ....+++.+|+|+.+
T Consensus       150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~~--------~~~~~~~~~~vA~~i  219 (270)
T PRK05650        150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQV-G-KL--------LEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHH-H-HH--------hhcCCCCHHHHHHHH
Confidence             7888765543       23589999999999987642110  001000000 0 00        012357899999999


Q ss_pred             HHHhcCC
Q 025908          200 VQVLGNE  206 (246)
Q Consensus       200 ~~~~~~~  206 (246)
                      +.+++++
T Consensus       220 ~~~l~~~  226 (270)
T PRK05650        220 YQQVAKG  226 (270)
T ss_pred             HHHHhCC
Confidence            9999764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.54  E-value=6.1e-13  Score=102.36  Aligned_cols=194  Identities=13%  Similarity=0.166  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+ .+..+ +.    .........+.++.+|+.+.+++.+++++.     .+|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHG-TNWDE-TR----RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHH-HH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987 32111 10    011111346889999999998888777632     6899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +    ++.++..+.  +..++|++||...+.+...          ...|.
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y~  164 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF----------VPAYT  164 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------chhhH
Confidence            9999986321                    1    122223332  4568999999776532111          11234


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+++       ..|++++.++|+.+..+...... ...........  ++       ...+...+|+++.+..
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~  235 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEPDDLMGAAVF  235 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHH
Confidence            88998887663       35899999999998776321100 00111111111  11       1235668999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.+.  ...|.++.+.++.
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        236 LASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HcChhhcCCCCCEEEECCCe
Confidence            88643  3367788877764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.53  E-value=8.8e-13  Score=101.25  Aligned_cols=195  Identities=15%  Similarity=0.206  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+..+.....     .+......++.++.+|+.+++++.+++++     .++|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532111     01111124678899999999888877753     26899


Q ss_pred             EEecCCCCcc-------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~-------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                         ..+.++..+.  +..++|++||...+..          +......
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------~~~~~~~  156 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------GFPGMAA  156 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------CCCCcch
Confidence            9999986311                         0122333333  4568999998765421          1111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.+-.+..... .............+.         ..+...+|+|+.+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  227 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL---------KRMAQPEEIAQAA  227 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            4 88988887653       2479999999999877631110 001111111111111         1245689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++.++  ...|.++.+.++.
T Consensus       228 ~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        228 LFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHcCchhcCCCCCeEEeCCch
Confidence            9998653  3357777777664

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.3e-13  Score=105.04  Aligned_cols=175  Identities=13%  Similarity=0.104  Sum_probs=116.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|..+++.|+++|++|++++|++.+......     .......++.++.+|+++.+.+..+++.     .++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEALAA-----ELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211100     0011124688899999999888777753     25999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +    .+.++..+.  +..++|++||...+++.           .+...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  155 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-----------PQWGAY  155 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC-----------CCccHH
Confidence            9999985321                    1    112223332  45789999998775321           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++++||+.+-.+.....            ....    ......++..+|+|++++.
T Consensus       156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~----~~~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQA----DFDRSAMLSPEQVAQTILH  219 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------cccc----ccccccCCCHHHHHHHHHH
Confidence             78888876543       3589999999999877631100            0000    0001235789999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++..+.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=2.7e-13  Score=103.59  Aligned_cols=193  Identities=17%  Similarity=0.164  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|++|.++++.|+++|++|+++ .|+..+......     ........+.++.+|+++++.+.++++..     ++|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE-----EIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999998 776544211110     00011246889999999999888777532     699


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||+++....                    +..+++++    +.  +..++|++||...+....           ....
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~~~~  154 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------CEVL  154 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------CccH
Confidence            99999986421                    11123333    22  456799999876542211           1122


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+++       ..+++++.+||+.+..+..... ...........  .       ....+...+|++++++
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~-~~~~~~~~~~~--~-------~~~~~~~~~~va~~~~  224 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF-SEEDKEGLAEE--I-------PLGRLGKPEEIAKVVL  224 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc-ChHHHHHHHhc--C-------CCCCCCCHHHHHHHHH
Confidence            4 77776665542       3589999999999876532211 11111111110  0       1123557899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...++.+++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        225 FLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHcCCccCCccCcEEEecCCc
Confidence            998653  2356777777653

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-13  Score=105.69  Aligned_cols=197  Identities=13%  Similarity=0.229  Sum_probs=125.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+..+..+...     .... ...++..+.+|++|++++.+++++    .++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKARE-----KIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            7999999999999999999999999997654211110     0000 124688899999999888887763    25899


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                        .++.++..++  +..++|++||...+..           ......|
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~y  157 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----------IPNIALS  157 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----------CCcchhh
Confidence            9999986321                        1233444443  4568999999775321           1111234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch----------HHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                       .+|...+.+.+       ..|++++.+.|+.+..+......          ..........  ..+       ...+..
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~  228 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK--PIP-------LGRLGE  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc--cCC-------cccCcC
Confidence             77888776653       36899999999988665210000          0000011110  111       123566


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      ++|+|+++..++...  ...++++.+.++...|
T Consensus       229 p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        229 PEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            899999999998643  3467788888876544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.53  E-value=1.1e-12  Score=99.93  Aligned_cols=194  Identities=21%  Similarity=0.280  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|+++.|..........    ........++.++.+|+.+++++.+++++     ..+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999883222111000    00111124688999999999888777653     25899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +    .+.++..++  +..++|++||.......           .....|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y  150 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQTNY  150 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCcchh
Confidence            9999985321                    1    112333343  56789999986542111           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+++       ..+++++.++|+.+.++.... ....+........+.         ..+...+|+++++.+
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  220 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPV---------GRLGRPEEIAAAVAF  220 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             77876665542       358999999999998874221 112222222222221         123457899999988


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.++  ...|+.+.+.++.
T Consensus       221 l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       221 LASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HcCchhcCccCCEEEecCCc
Confidence            87553  3467788888764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.53  E-value=5.3e-13  Score=101.87  Aligned_cols=191  Identities=17%  Similarity=0.217  Sum_probs=119.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|+++++.|+++|+.|++..|+..+......        ....++.++.+|+++.+++.+++++     .++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA--------ELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999888877554221110        0124678899999999888877643     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC-----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...+++++     + +..++|++||...+....          ....|.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~  153 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------GQANYC  153 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC----------CCcchH
Confidence            9999986321                    122233332     1 456899999865432111          111233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.++|+.+..+.... ...........  ..+       ...+.+.+|+++++..+
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~--~~~-------~~~~~~~~~ia~~~~~l  223 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIMG--AIP-------MKRMGTGAEVASAVAYL  223 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHhc--CCC-------CCCCcCHHHHHHHHHHH
Confidence            77776654432       357999999999876543211 11111011111  111       12245689999999988


Q ss_pred             hcCCC--CCCeeEEeeCCe
Q 025908          203 LGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (246)
                      +....  ..++.+++.++.
T Consensus       224 ~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        224 ASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             cCccccCcCCCEEEECCCc
Confidence            86532  357888888764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3e-13  Score=104.02  Aligned_cols=171  Identities=16%  Similarity=0.207  Sum_probs=113.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|++++|+..+........     .. ..++.++.+|+++.+++.+++++     ..+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL-----PK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999865422111100     00 12688999999999988877653     14899


Q ss_pred             EEecCCCCcc---------------------chHH----HHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~----l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                     +...    ++.++.  +..++|++||...+...          .....|
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y  151 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL----------PGAGAY  151 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------CCCcch
Confidence            9999985321                     1112    333443  45789999986653111          011124


Q ss_pred             cccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.++       +..+++++.+||+.+.++...            . .....       ..+++.+++++.++.
T Consensus       152 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------------~-~~~~~-------~~~~~~~~~a~~~~~  211 (257)
T PRK07024        152 SASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA------------H-NPYPM-------PFLMDADRFAARAAR  211 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh------------c-CCCCC-------CCccCHHHHHHHHHH
Confidence            48899888765       246899999999998876210            0 00000       013578999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++.++.
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            997643

>PRK08264 short chain dehydrogenase; Validated

Probab=99.52  E-value=3.1e-13  Score=102.73  Aligned_cols=160  Identities=17%  Similarity=0.189  Sum_probs=112.7

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~   78 (246)
                      |||+|++|+++++.|+++|+ +|+++.|+..+..+            ...++.++.+|+.+.+++.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999998 99999998765321            1357889999999999998888743 4899999


Q ss_pred             cCCC-Ccc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           79 INGR-EAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        79 ~~~~-~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +++. ...                    ....++++    +.  +..+++++||...+.+.           .+...| .
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~~~y~~  148 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNLGTYSA  148 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCchHhHH
Confidence            9987 211                    12233333    22  45689999987764321           122234 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...|.+.+       ..+++++++||+.+.++...             .  .    .    ...+..+|+++.++..+
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~--~----~----~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------G--L----D----APKASPADVARQILDAL  205 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------c--C----C----cCCCCHHHHHHHHHHHH
Confidence            8888876653       24899999999988665210             0  0    0    11466788999888888


Q ss_pred             cCC
Q 025908          204 GNE  206 (246)
Q Consensus       204 ~~~  206 (246)
                      ..+
T Consensus       206 ~~~  208 (238)
T PRK08264        206 EAG  208 (238)
T ss_pred             hCC
Confidence            654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.2e-12  Score=101.06  Aligned_cols=194  Identities=14%  Similarity=0.151  Sum_probs=121.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+... .....     ........+.++.+|+++.+++.+++++     .++|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLAD-----ELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHH-----HHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987532 11100     0111124677899999999888887764     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +...++++    +.  +..++|++||.....          .+......|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~~~~Y  155 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPGETAY  155 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCCcchH
Confidence            9999986211                    12223333    22  456899998854310          011112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-------chHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                       .+|...|.+.+       ..+++++.++|+.+.++....       ......+.......+.         ..+...+|
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~  226 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL---------RRLADPLE  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC---------CCCCCHHH
Confidence             88988887664       247999999999988763110       0011122222222111         12457899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +|+++..++...  ...++++.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECCCc
Confidence            999999888542  4467777777764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.4e-13  Score=103.50  Aligned_cols=168  Identities=19%  Similarity=0.166  Sum_probs=113.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|++|.++++.|+++|++|++++|+..+..+ +.        ....++.++.+|+++.+++.+++++.  .+|.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LH--------TQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HH--------HhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            7999999999999999999999999997654211 11        11246788999999999999988742  4688888


Q ss_pred             cCCCCc--------------------cchHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHH
Q 025908           79 INGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLN  134 (246)
Q Consensus        79 ~~~~~~--------------------~~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~  134 (246)
                      +++...                    .+..++++++    .+..++|++||....-+          ......|..+|..
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~Y~asK~a  147 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------LPRAEAYGASKAA  147 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------CCCCchhhHHHHH
Confidence            886421                    0122334332    23457888887543210          0111234488998


Q ss_pred             HHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       135 ~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      ++.+.+       ..+++++.+||+.++++....             .....       ...++.+|+++.++..++...
T Consensus       148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~~~-------~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTFAM-------PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCCCC-------CcccCHHHHHHHHHHHHhcCC
Confidence            887753       468999999999998873211             00000       113679999999999998753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.51  E-value=5.2e-13  Score=103.06  Aligned_cols=194  Identities=13%  Similarity=0.110  Sum_probs=120.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+......     .......++.++.+|+++.+++.+++++     .++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAE-----QIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211100     0111124688899999999988877763     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC-------CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +..++.+++.       +..++|++||.....           +..+...
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  159 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGRGFAA  159 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCCCCch
Confidence            9999985211                    1233444431       346899999854421           1112233


Q ss_pred             c-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|..++.+++.      .+++++.++|+.+..+..... ....+........+         .......+|++++++
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  230 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDPEDIAAAAV  230 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            4 899998887642      357888899988765521100 00111111111111         112446899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...++.+.+.++.
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            998653  2356777776653

>PRK09242 tropinone reductase; Provisional

Probab=99.51  E-value=1.5e-12  Score=100.18  Aligned_cols=194  Identities=18%  Similarity=0.253  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|.||+++++.|.++|++|++++|+.....+...     +....  ...+.++.+|+++.+++.++++.     .++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQARD-----ELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999999999999997654211110     00001  24678899999998887777653     268


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |+|||+++....                    +...++++    ++  +..++|++||...+.+.           .+..
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~  158 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------RSGA  158 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------CCCc
Confidence            999999986311                    12223333    22  45789999987664321           1222


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      .| .+|...+.+++       ..+++++.++|+.+.++...... ...+........+.         .-+...+|++++
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  229 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAA  229 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            34 78888877654       35899999999999887422110 11122222222221         113357999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +..++...  ...++.+.+.++.
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HHHHhCcccccccCCEEEECCCe
Confidence            99998643  2356777777653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.3e-12  Score=100.21  Aligned_cols=195  Identities=17%  Similarity=0.222  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---------   70 (246)
                      |||+|+||.++++.|.+.|++|.+..++ ........     .+.......+..+.+|+.+.+.+..++++         
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            7999999999999999999999887543 22211100     00111124567788999987766554431         


Q ss_pred             --CCccEEEecCCCCcc--------------------chHHH----HHhCCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           71 --KGFDVVYDINGREAD--------------------EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~--------------------~~~~l----~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                        .++|++||++|....                    +...+    +..+....++|++||...+...           .
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  153 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----------P  153 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-----------C
Confidence              169999999986321                    11112    2223333589999998764221           1


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ....| .+|..++.+++       ..+++++.+.|+.+.++..................        .....+.+++|+|
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva  225 (252)
T PRK12747        154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFNRLGEVEDIA  225 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------CcccCCCCHHHHH
Confidence            12234 89999887664       35899999999999887421100000011110100        0112356799999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++..++...  ...|..+.+.++.
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        226 DTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHHcCccccCcCCcEEEecCCc
Confidence            9999988643  2457778777763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.51  E-value=1.7e-12  Score=99.14  Aligned_cols=192  Identities=19%  Similarity=0.265  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++.+...... ..+.     +.......+..+.+|+.|.+++.+++++     .++|
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLE-----DQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID   83 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHH-----HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999888654322111 1010     0111123577789999999888877753     2689


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||+++....                    +    ++.++..+.  +..++|++||.....+           ......
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  152 (246)
T PRK12938         84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTN  152 (246)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----------CCCChh
Confidence            99999986321                    1    222333333  4578999998654211           112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.+|.... .....+.......+         ...+...+|++++++
T Consensus       153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~  222 (246)
T PRK12938        153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVA  222 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHH
Confidence            4 78887766543       357999999999988774211 11222222222111         122456899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCC
Q 025908          201 QVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~  218 (246)
                      .++..+  ...+..+.+.++
T Consensus       223 ~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        223 WLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHcCcccCCccCcEEEECCc
Confidence            988653  345677777665

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=2.2e-12  Score=97.82  Aligned_cols=184  Identities=15%  Similarity=0.179  Sum_probs=117.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-CCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~   79 (246)
                      |||+|+||.++++.|.++|++|+++.|+....   .           ..++..+.+|+.++  +.++++. .++|++||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---L-----------SGNFHFLQLDLSDD--LEPLFDWVPSVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---c-----------CCcEEEEECChHHH--HHHHHHhhCCCCEEEEC
Confidence            79999999999999999999999999875441   1           24678899999887  4444432 279999999


Q ss_pred             CCCCc------c---------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccH
Q 025908           80 NGREA------D---------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (246)
Q Consensus        80 ~~~~~------~---------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (246)
                      ++...      +               +..++++++    .  +..++|++||...+....          ....|..+|
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~sK  144 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG----------GGAAYTASK  144 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------CCcccHHHH
Confidence            98421      0               112233332    1  345899999876542111          112244788


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      ...+.+.+       ..+++++.++|+.+.++.....+. ..+........+         ...+...+|+|++++.++.
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s  215 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLAS  215 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcC
Confidence            88776553       358999999999998874322111 111111111111         1225568999999999986


Q ss_pred             CC--CCCCeeEEeeCCe
Q 025908          205 NE--KASRQVFNISGEK  219 (246)
Q Consensus       205 ~~--~~~~~~~~~~~~~  219 (246)
                      ..  ...+.++.+.++.
T Consensus       216 ~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        216 GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             hhhccCCCcEEEECCce
Confidence            43  3456777777764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.50  E-value=5.9e-13  Score=105.98  Aligned_cols=186  Identities=17%  Similarity=0.180  Sum_probs=120.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+..+.....     .+..+....+.++.+|++|.+++++++++     .++|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEALA-----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865421111     11111234678899999999988887653     26999


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                        .++.++..+.  +..++|++||...+....           ....|
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  157 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP-----------LQSAY  157 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------cchHH
Confidence            9999986321                        1223444443  457899999987753211           12234


Q ss_pred             -ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                       .+|...+.+.+         ..+++++.++|+.+.+|.     .... ........       .....+.+.+|+|+++
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~-----~~~~-~~~~~~~~-------~~~~~~~~pe~vA~~i  224 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ-----FDWA-RSRLPVEP-------QPVPPIYQPEVVADAI  224 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch-----hhhh-hhhccccc-------cCCCCCCCHHHHHHHH
Confidence             78887765542         146999999999887762     1111 00000000       1112356789999999


Q ss_pred             HHHhcCCCCCCeeEEeeCC
Q 025908          200 VQVLGNEKASRQVFNISGE  218 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~  218 (246)
                      +.++.++.   ..+.+++.
T Consensus       225 ~~~~~~~~---~~~~vg~~  240 (334)
T PRK07109        225 LYAAEHPR---RELWVGGP  240 (334)
T ss_pred             HHHHhCCC---cEEEeCcH
Confidence            99998753   34556543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.8e-13  Score=104.44  Aligned_cols=136  Identities=18%  Similarity=0.136  Sum_probs=95.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|++|+++++.|.++|++|++++|+..+... +.          ..++.++.+|+.+.+++.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LA----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 11          235778899999998888777532     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCccc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (246)
                      |||++|....                    +...++++    ++ +..++|++||...+...          .....|..
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~Y~~  145 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----------PFAGAYCA  145 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----------CCccHHHH
Confidence            9999985321                    11223333    33 44678999886543211          01112338


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCC
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~  157 (246)
                      +|...+.+.+       ..|++++.++|+.+.++
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            8888777642       36899999999998765

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.50  E-value=3e-12  Score=98.93  Aligned_cols=194  Identities=16%  Similarity=0.184  Sum_probs=123.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|.++++.|+++|++|+++.|+..+..+..     ........++.++.+|+++.+++.+++++     .++|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988765432111     01111123688899999999998888864     25899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    .+.++..+.  +..++|++||......           ..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  159 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-----------RETVSAY  159 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-----------CCCCccH
Confidence            9999986321                    1    112333332  4568999998543211           1112334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-------HHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                       .+|..++.+.+       ..+++++.++|+.+.++......       ...+........+         ...+...+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  230 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPED  230 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHH
Confidence             88888877663       35899999999999887421100       0001111111111         112456899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +|+.+..++...  ...+..+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        231 LAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999998753  3356777777764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.50  E-value=2.6e-12  Score=98.42  Aligned_cols=193  Identities=15%  Similarity=0.123  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|+++.|+......       ........++.++.+|+++.+++.+++++     .++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQ-------AQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHHH-------HHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998875432110       01111234688899999999998888764     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +    .+.++..+.  + ..++|++||...+.....          ...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------~~~Y  156 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR----------VPSY  156 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC----------Ccch
Confidence            9999986321                    1    112222222  2 358999999776532111          1124


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ..+|...+.+.+       ..|++++.++||.+-.+...... ...........  ++.       ..+..++|+|+++.
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~peeva~~~~  227 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGTPDDLAGPAI  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcCHHHHHHHHH
Confidence            488988887653       36899999999988665311000 00111111111  111       12467899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCe
Q 025908          201 QVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .++..  ....++.+.+.++.
T Consensus       228 ~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        228 FLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HHhCccccCcCCceEEECCCE
Confidence            99864  23467777777663

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.50  E-value=6e-13  Score=102.24  Aligned_cols=192  Identities=18%  Similarity=0.181  Sum_probs=117.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|.++|++|++++|+..+......          ..+..++.+|+++.+++.+++++     .++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----------EVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----------HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211111          11235788999999988888864     26899


Q ss_pred             EEecCCCCcc----------------------c----hHHHHHhCC--CCceEEEEeecc-eeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~  126 (246)
                      |||+++....                      +    ++.++..+.  +..++|++||.. +++..          ....
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~----------~~~~  152 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA----------TSQI  152 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC----------CCCc
Confidence            9999985311                      0    111222222  345889888854 44321          0112


Q ss_pred             CccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .|..+|...+.+.+       ..+++++.++|+.+.++.....+.. ......+ .....+     ...+.+++|+++++
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~-----~~~~~~~~~~a~~~  225 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-DPERAAR-RLVHVP-----MGRFAEPEEIAAAV  225 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-CHHHHHH-HHhcCC-----CCCCcCHHHHHHHH
Confidence            24478876655442       3589999999999988742111000 0000000 000111     11467899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ..++...  ...+..+.+.++.
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        226 AFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHhCccccCccCcEEEECCCe
Confidence            9888643  3346677776653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.50  E-value=1.5e-12  Score=99.90  Aligned_cols=194  Identities=17%  Similarity=0.171  Sum_probs=124.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+.++......     .......++..+.+|+++.+++..++++.     ++|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVA-----LIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999998655221111     11111346889999999998888777532     5799


Q ss_pred             EEecCCCCcc---------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                     +.    +.++..+.  +..++|++||...+.+.           .....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~  156 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-----------PKMSI  156 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------CCCch
Confidence            9999986311                     01    11222222  45689999987765321           12233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|...+.+.+       ..+++++.+.|+.+-.+......  ............+         ...+..++|+++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~ia~~  227 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP---------VGRIGKVEEVASA  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC---------CCCccCHHHHHHH
Confidence            5 88988887653       24799999999988665311000  0111111111111         1124578999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++...  ...|+.+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        228 VLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            99998653  3467788888764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.50  E-value=7.5e-13  Score=101.52  Aligned_cols=193  Identities=13%  Similarity=0.124  Sum_probs=122.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|.++|++|++++|+..+......     +.......+..+.+|+.+.+++.+++++     ..+|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVAD-----AIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654221111     1111124577899999999888777653     25899


Q ss_pred             EEecCCCCcc---------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                     +.    +.+++.+.  +..+++++||...+.           +..+...
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  157 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PGDFQGI  157 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CCCCCcc
Confidence            9999985210                     11    22233333  457899999865432           1122334


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|..++.+++       ..|++++.+.|+.+..+...... ............+         ...+...+|+|+.+
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  228 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAV  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHH
Confidence            5 89999988764       24899999999988665311100 0111112211111         11245689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCC
Q 025908          200 VQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~  218 (246)
                      ..++.+.  ...++++.+.++
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            9998654  235677777665

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.49  E-value=3.5e-12  Score=98.36  Aligned_cols=193  Identities=13%  Similarity=0.120  Sum_probs=121.1

Q ss_pred             CCccc-cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-h-cCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+| -||.++++.|.++|++|+++.|+..+......     +... + ..++..+.+|+.+++++.+++++     ..
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD-----ELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            69997 69999999999999999999887654221110     0000 1 13578899999999888877753     26


Q ss_pred             ccEEEecCCCCcc--------------------chHHHHH----hCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD--------------------EVEPILD----ALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~~~--------------------~~~~l~~----a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|++||++|....                    +...+++    .+.  + ..+++++||...+.           +..+
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~  166 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------AQHG  166 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCCC
Confidence            8999999985311                    1111222    222  2 45788887754421           1112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+..+.............+....++         ..+...+|+++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~  237 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVAN  237 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            2334 89999888764       2589999999999988742211112222222222221         12445899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCC
Q 025908          198 AFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      +++.++...  ...|+++.+.++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCC
Confidence            999988653  345677766654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.49  E-value=2.9e-12  Score=98.49  Aligned_cols=195  Identities=15%  Similarity=0.185  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+.....+..     .+......++..+.+|+++++.+.+++++     .++|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865421111     01111134688999999999888877753     25799


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +    .+.+++.+.  +..++|++||...+....          ....|.
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------~~~~Y~  161 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA----------GDAVYP  161 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC----------CccHhH
Confidence            9999986321                    1    122223332  567899999876532111          111233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       ..+++++.++|+.+.++...... ...+.......  .+.       ..+++++|++++++.
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~a~~~~~  232 (256)
T PRK06124        162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TPL-------GRWGRPEEIAGAAVF  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CCC-------CCCCCHHHHHHHHHH
Confidence            77887776553       24899999999999887421110 11111112111  111       236789999999999


Q ss_pred             HhcCCC--CCCeeEEeeCCe
Q 025908          202 VLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (246)
                      ++..+.  ..|+.+.+.++.
T Consensus       233 l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        233 LASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HcCcccCCcCCCEEEECCCc
Confidence            997642  356677776653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.49  E-value=2.8e-12  Score=97.50  Aligned_cols=193  Identities=15%  Similarity=0.152  Sum_probs=119.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|.++|++|++++|..........    .+......++.++.+|+++.+++..++++     ..+|.
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVV----SAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999876533111110    01111135688999999999888777653     25799


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC-----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                    +...+++++     +  +..++|++||...+.+..          ....|
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~Y  149 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------GQVNY  149 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------CCcch
Confidence            9999885311                    122333432     1  446899999865432111          01123


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.+.+       ..+++++.++|+.+.++.... .. ..........++         ..+...+|+++++.+
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~---------~~~~~~~~va~~~~~  218 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VE-HDLDEALKTVPM---------NRMGQPAEVASLAGF  218 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hh-HHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            378887765542       358999999999987764221 11 111112111111         123457999999999


Q ss_pred             HhcCC--CCCCeeEEeeCC
Q 025908          202 VLGNE--KASRQVFNISGE  218 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~  218 (246)
                      ++..+  ...+.+..+.++
T Consensus       219 l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       219 LMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HcCchhcCccCCEEEecCC
Confidence            98753  334556555554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.48  E-value=1.1e-12  Score=96.26  Aligned_cols=180  Identities=16%  Similarity=0.076  Sum_probs=116.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhc-CceEEEEccCCCHHHHHHhhhc----C-Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----K-GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~----~-~~d   74 (246)
                      ||||+.||.++++.|.+.|++|++..|+.++..+...+        +. ..+.....|++|.+++..+++.    . ++|
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~--------~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERLEALADE--------IGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHh--------hccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            79999999999999999999999999998884322111        11 3578899999999886666642    2 699


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCC-CCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~~~  127 (246)
                      ++||+||....                    +..+...+    +.  +.-++|.+||....           .+. ....
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~~v  152 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGGAV  152 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCCcc
Confidence            99999997422                    22222222    22  44599999987641           111 1112


Q ss_pred             ccccHHHHHHHH---H----hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RHKGKLNTESVL---E----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~~~k~~~e~~~---~----~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      |..+|+.+..+.   +    ..+++++.+-|+.+-.......-...--.++   ...      -....++..+|+|++++
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~---~~~------y~~~~~l~p~dIA~~V~  223 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERA---DKV------YKGGTALTPEDIAEAVL  223 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhH---HHH------hccCCCCCHHHHHHHHH
Confidence            447888876653   2    2579999999998744311000000000000   000      01245777999999999


Q ss_pred             HHhcCCCC
Q 025908          201 QVLGNEKA  208 (246)
Q Consensus       201 ~~~~~~~~  208 (246)
                      +++.+|.+
T Consensus       224 ~~~~~P~~  231 (246)
T COG4221         224 FAATQPQH  231 (246)
T ss_pred             HHHhCCCc
Confidence            99998864

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.2e-12  Score=100.41  Aligned_cols=195  Identities=17%  Similarity=0.144  Sum_probs=122.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+..+......     .......++..+.+|+++++++.+++++     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLAD-----EIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999997654211110     0111124678899999999988887753     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC-C--CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                    +...++++    +. +  ..+++++||....-..        .+.....|
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------~~~~~~~Y  161 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------VPQQVSHY  161 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--------CCCCccch
Confidence            9999986321                    12222332    21 1  2468888876532000        00011124


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.+.+       ..|++++.++|+.+-.+.... . ...........+.         ..+..++|+|++++.
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~~  230 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYLY  230 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence            488998887764       358999999999987763211 1 1111111111111         125578999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++...  ...|+++.+.++.
T Consensus       231 L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HcCcccCCcCCCeEEECCCc
Confidence            99643  3467788888764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.47  E-value=3.8e-12  Score=98.70  Aligned_cols=198  Identities=17%  Similarity=0.146  Sum_probs=122.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+ .+..+...     +......++..+.+|+++++++..++++     .++|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVD-----KIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHH-----HHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 43211111     1111124688999999999888777753     25899


Q ss_pred             EEecCCCCcc--c-----------------------hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--E-----------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--~-----------------------~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....  .                       .+.++..+. ...++|++||...+....          ....|.
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~Y~  155 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------YRSGYN  155 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------CCchHH
Confidence            9999986321  0                       111223332 236899999876542211          112244


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc---hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .+|...+.+++       ..|++++.+.||.+..+.....   ....+............     ....+..++|+++++
T Consensus       156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~  230 (272)
T PRK08589        156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PLGRLGKPEEVAKLV  230 (272)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CCCCCcCHHHHHHHH
Confidence            88988887764       3579999999999877631110   00000000000000000     011245789999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +.++...  ...++.+.+.++.
T Consensus       231 ~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        231 VFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHcCchhcCcCCCEEEECCCc
Confidence            9998643  3467788887764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.47  E-value=1.7e-12  Score=94.02  Aligned_cols=220  Identities=17%  Similarity=0.103  Sum_probs=153.7

Q ss_pred             CCccccchHHHHHHHHHC-CC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||+-|.+|..+++.|..+ |. .|+.-+-.+.+  ....           .+=.++..|+.|...+++..-..++|-++|
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~-----------~~GPyIy~DILD~K~L~eIVVn~RIdWL~H  116 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVT-----------DVGPYIYLDILDQKSLEEIVVNKRIDWLVH  116 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhc-----------ccCCchhhhhhccccHHHhhcccccceeee
Confidence            799999999999999876 54 44433322222  1111           233456788888888888887678999999


Q ss_pred             cCCC---------------CccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCC-CCCCCCcc-ccHHHHHHH--
Q 025908           79 INGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV--  138 (246)
Q Consensus        79 ~~~~---------------~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~--  138 (246)
                      +++.               +..+..|+++.++ ..-++...||.++||+.....-+.+. -..|...| .+|..+|-+  
T Consensus       117 fSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE  196 (366)
T KOG2774|consen  117 FSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE  196 (366)
T ss_pred             HHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence            7542               5668999999877 44466678999999875432222221 13455666 888877653  


Q ss_pred             --HHhcCCceEEeecceeeCCC----CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC--CCC
Q 025908          139 --LESKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (246)
Q Consensus       139 --~~~~~~~~~ilR~~~i~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~  210 (246)
                        ..+.|+++-.+|++.++...    ....+....+..+.++.....+-.++....+++.+|+-++++.++..+.  ...
T Consensus       197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkr  276 (366)
T KOG2774|consen  197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKR  276 (366)
T ss_pred             HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhh
Confidence              45688999999999888743    1233444455555555545555556678899999999999999886653  245


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHh
Q 025908          211 QVFNISGEKYVTFDGLARACAKVT  234 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~  234 (246)
                      ++||+++ -..+..|+++.+.+..
T Consensus       277 r~ynvt~-~sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  277 RTYNVTG-FSFTPEEIADAIRRVM  299 (366)
T ss_pred             heeeece-eccCHHHHHHHHHhhC
Confidence            7999998 5689999999998876

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.47  E-value=5.9e-12  Score=97.06  Aligned_cols=195  Identities=17%  Similarity=0.158  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+.........    .+......++.++.+|++|.+++.+++++     ..+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988886433111110    01111124577899999999888877753     25899


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++.....                        ++.++..+.  + ..++|++||...+           .+..+...
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~  157 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWPLFVH  157 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCCCCcc
Confidence            99999863210                        122333333  2 3589999985432           12222233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++...... ............+.         ..+...+|+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  228 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM---------GYIGKPEEIAAVA  228 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            4 78877665542       35899999999999887422111 11111111111111         1355689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .+++...  ...+..+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCc
Confidence            9998653  3356666666653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=1.7e-11  Score=94.23  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=120.9

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCC-C-----CchhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-E-----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~-----~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||+|  .+|.++++.|.++|++|++++|++.+....... .     ...........+.++.+|+.+.+++.+++++  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            69995  699999999999999999999874321000000 0     0011111234688999999999888777753  


Q ss_pred             ---CCccEEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCC
Q 025908           71 ---KGFDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        71 ---~~~d~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                         ..+|+|||+++....                    +...+++++    .  ...++|++||...+.+.         
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------  161 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM---------  161 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC---------
Confidence               258999999986311                    122233332    2  34689999987664321         


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                        .....| .+|..++.+++       ..+++++.++|+.+..+....    ..........+    .     ..+..++
T Consensus       162 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~~~----~-----~~~~~~~  226 (256)
T PRK12748        162 --PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPKFP----Q-----GRVGEPV  226 (256)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhccCC----C-----CCCcCHH
Confidence              112234 89999988754       258999999999876653211    11111111110    1     1234579


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      |+++.+.+++...  ...+.++++.++.
T Consensus       227 ~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        227 DAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHHhCcccccccCCEEEecCCc
Confidence            9999999888653  3357788887753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.47  E-value=3.7e-12  Score=98.49  Aligned_cols=187  Identities=17%  Similarity=0.149  Sum_probs=119.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+.....              ..++..+.+|+++++.+.++++.     ..+|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765521              24678899999999888877764     26899


Q ss_pred             EEecCCCCcc-----------------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCC
Q 025908           76 VYDINGREAD-----------------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        76 vi~~~~~~~~-----------------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                      +||++|....                             +...++++    +.  +..++|++||...+...        
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  152 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS--------  152 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC--------
Confidence            9999985311                             11222333    21  33579999987654211        


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeC-CCCCCchH-----------HHHHHHHHhCCCcccC
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVE-----------EWFFHRLKAGRPIPIP  180 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g-~~~~~~~~-----------~~~~~~~~~~~~~~~~  180 (246)
                         .....| .+|...+.+++       ..+++++.++|+.+.. +.......           ..+..........+  
T Consensus       153 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  227 (266)
T PRK06171        153 ---EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--  227 (266)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc--
Confidence               112334 88888887653       3589999999998742 21110000           00111111100111  


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          181 GSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                           ...+...+|+|+++..++...  ...++++++.++.
T Consensus       228 -----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        228 -----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             -----CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence                 122456899999999998643  3467777777653

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.5e-12  Score=99.51  Aligned_cols=155  Identities=15%  Similarity=0.067  Sum_probs=98.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+........   ........+.++.+|+.|.+++.+++++     .++|+
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   98 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI---TAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDL   98 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---HHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCE
Confidence            799999999999999999999999999765422111000   0000024678899999999988877753     25899


Q ss_pred             EEecCCCCcc------------------c----hHHHHHhCC--CCceEEEEeecceec--cCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYL--KSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~--~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                  +    +..+++.++  +..++|++||...+.  ...........+..+...|
T Consensus        99 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y  178 (306)
T PRK06197         99 LINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAY  178 (306)
T ss_pred             EEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHH
Confidence            9999985211                  1    334555554  457999999976542  1111111111222333445


Q ss_pred             -ccHHHHHHHHH-------hcCCceEE--eecceeeCCC
Q 025908          130 -KGKLNTESVLE-------SKGVNWTS--LRPVYIYGPL  158 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~i--lR~~~i~g~~  158 (246)
                       .+|...+.+.+       ..++++++  +.||.+..+.
T Consensus       179 ~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        179 GQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence             89988887653       24555544  4798887653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=9.8e-13  Score=99.97  Aligned_cols=187  Identities=17%  Similarity=0.246  Sum_probs=117.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|++|.++++.|+++|++|++++|+..+......     .... ..++..+.+|+.+.+++.+++++     .++|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKK-----TLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999998654211100     0000 13678899999999888877653     14799


Q ss_pred             EEecCCCCcc------------------c----hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           76 VYDINGREAD------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        76 vi~~~~~~~~------------------~----~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ++|+++....                  .    .+.++..+....++|++||......          +..+...| .+|
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~~~~~~Y~~sK  154 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------ASPDQLSYAVAK  154 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------CCCCchHHHHHH
Confidence            9999875321                  1    1112222223357899988654110          11122234 788


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ...+.+++       ..+++++++||++++++.....    ...   .   ....+     ..+++.+|+++++.+++..
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~---~---~~~~~-----~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWK---K---LRKLG-----DDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhh---h---hcccc-----CCCCCHHHHHHHHHHHhcc
Confidence            87765542       3589999999999998732110    000   0   00001     1256789999999999965


Q ss_pred             CC--CCCeeEEeeCC
Q 025908          206 EK--ASRQVFNISGE  218 (246)
Q Consensus       206 ~~--~~~~~~~~~~~  218 (246)
                      +.  ..+..+.+.++
T Consensus       220 ~~~~~~g~~~~~~~~  234 (238)
T PRK05786        220 EADWVDGVVIPVDGG  234 (238)
T ss_pred             cccCccCCEEEECCc
Confidence            32  24666666554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.6e-12  Score=99.10  Aligned_cols=172  Identities=16%  Similarity=0.132  Sum_probs=113.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|+||.++++.|+++|++|++++|+..+........    ......++.++.+|+.+.+++.+++++.  .+|.+||
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~   82 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLADDL----RARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLI   82 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH----HHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEE
Confidence            799999999999999999999999999875532111100    0011247889999999999888877632  5799999


Q ss_pred             cCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccH
Q 025908           79 INGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (246)
Q Consensus        79 ~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (246)
                      ++|....                    +...++++    +.  +..+++++||......          ......|..+|
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~Y~~sK  152 (243)
T PRK07102         83 AVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------RASNYVYGSAK  152 (243)
T ss_pred             CCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------CCCCcccHHHH
Confidence            9875211                    12223333    22  4678999998654211          11112344888


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ...+.+.+       +.+++++.++|+.+.++...             .  ...+     ....++.+|+++.++..++.
T Consensus       153 ~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~--~~~~-----~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        153 AALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------G--LKLP-----GPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------c--cCCC-----ccccCCHHHHHHHHHHHHhC
Confidence            88776553       45899999999998876210             0  0111     11256789999999999986


Q ss_pred             C
Q 025908          206 E  206 (246)
Q Consensus       206 ~  206 (246)
                      +
T Consensus       213 ~  213 (243)
T PRK07102        213 G  213 (243)
T ss_pred             C
Confidence            4

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.46  E-value=6.3e-12  Score=96.40  Aligned_cols=195  Identities=15%  Similarity=0.167  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.+|+++++.|.++|++|++++|+..+.....     .........+.++.+|+++++++.+++++     .++|+
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999865421111     01111125688999999999888877753     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC-----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +..++++++     .  ...++|++||...+...          .....|
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y  151 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------PGVIHS  151 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------CCCcch
Confidence            9999974211                    112233332     2  23589999876543111          111224


Q ss_pred             cccHHHHHHHHH--------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~~~k~~~e~~~~--------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..+|...+.+.+        +.|++++.++||.+.++......  .......+.+..++         ..+...+|++++
T Consensus       152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  222 (252)
T PRK07677        152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGL  222 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHH
Confidence            478888776653        24899999999998754211110  11122222221111         124568999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +..++...  ...|.++.+.++.
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        223 AYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHcCccccccCCCEEEECCCe
Confidence            99888643  3467777777764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.46  E-value=4.9e-12  Score=97.43  Aligned_cols=195  Identities=13%  Similarity=0.154  Sum_probs=125.2

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|.||+.+++.|.++|++ |+++.|+..+.....     ....+....+.++.+|+++++++.++++.     .++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            699999999999999999998 999998765422110     01111134677899999999988887763     2689


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C---CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      ++||+++....                    +..++++++    .   ...++|++||...++....          ...
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------~~~  156 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF----------LAA  156 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC----------cch
Confidence            99999986321                    122233332    2   1357999998877543211          122


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC------chHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      |..+|..+|.+.+       ..+++++.++|+.++++....      .....+........         ....+++.+|
T Consensus       157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  227 (260)
T PRK06198        157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDE  227 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHH
Confidence            4488998887764       246899999999998874210      00011111111111         1224578999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++++++...  ...++++.+.++.
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECCcc
Confidence            999999998643  2367788877754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.46  E-value=4.6e-12  Score=97.62  Aligned_cols=196  Identities=14%  Similarity=0.117  Sum_probs=119.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++.||+++++.|++.|++|+++.|+..........    ... .....+.++.+|++|++++.+++++     .++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAE----DLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            79999999999999999999998887654321111100    000 0124678999999999888877764     2689


Q ss_pred             EEEecCCCCc-------c--------c---------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           75 VVYDINGREA-------D--------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        75 ~vi~~~~~~~-------~--------~---------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                      ++||+++...       .        .               ++.++..+.  +..++|++||...+...         +
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~  160 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---------E  160 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC---------C
Confidence            9999996420       0        0               122333333  34689999986542110         0


Q ss_pred             CCCCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                       ....|..+|...+.+++       ..|++++.+.||.+-.+..... -............+.         ..+..++|
T Consensus       161 -~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~  230 (260)
T PRK08416        161 -NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL---------NRMGQPED  230 (260)
T ss_pred             -CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC---------CCCCCHHH
Confidence             11134488999887763       3589999999998765521000 001111111111111         12556899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++++.++...  ...++.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        231 LAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            999999998643  2357777777764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.46  E-value=5.2e-13  Score=100.52  Aligned_cols=179  Identities=17%  Similarity=0.138  Sum_probs=117.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||||.||.++++.|.++|++|+.+.|+.++..+...+ ..   ....-.+.++.+|+++++++..+...     ..+|+
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~-l~---~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALAKE-LE---DKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHH-HH---HhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            79999999999999999999999999999874322111 00   01124578999999998887766542     26999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....+                        ++.++.-+.  +..++|.++|...|-+.          +.-..|+
T Consensus        88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------p~~avY~  157 (265)
T COG0300          88 LVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------PYMAVYS  157 (265)
T ss_pred             EEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------cchHHHH
Confidence            99999984321                        112222222  45689999998875221          1111234


Q ss_pred             ccHHHHHHH-------HHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~-------~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|..+-.+       ++..|+.++.+.||.+..+..         . . .+.....   .....-+++.+|+|+..+..
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~---------~-~-~~~~~~~---~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF---------D-A-KGSDVYL---LSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc---------c-c-ccccccc---ccchhhccCHHHHHHHHHHH
Confidence            777665433       345789999999998766531         1 0 1111111   01134578899999999999


Q ss_pred             hcCCC
Q 025908          203 LGNEK  207 (246)
Q Consensus       203 ~~~~~  207 (246)
                      +.+.+
T Consensus       224 l~~~k  228 (265)
T COG0300         224 LEKGK  228 (265)
T ss_pred             HhcCC
Confidence            98754

>TIGR02415 23BDH acetoin reductases

Probab=99.45  E-value=1.5e-12  Score=99.97  Aligned_cols=198  Identities=20%  Similarity=0.194  Sum_probs=119.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|++.|++|+++.|+.........     ........+.++.+|++|++++.+++++.     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAK-----EINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999987543211110     11111346888999999999888776532     5899


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                    +.    +.++..+.  + ..++|++||.....+.           .....
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----------PILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----------CCCcc
Confidence            9999986321                    01    12223322  2 3689999986553211           11223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccC------CCCCceeeeeeHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKD  194 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D  194 (246)
                      | .+|...+.+.+       ..+++++.++|+.+..+..     ..+..........+..      ........+.+++|
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED  224 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence            4 78988887664       2478999999998866521     0010000000000000      00000123677899


Q ss_pred             HHHHHHHHhcCCC--CCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~~~~~~  219 (246)
                      +++++..++.+..  ..+..+.+.++.
T Consensus       225 ~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       225 VAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             HHHHHHhhcccccCCccCcEEEecCCc
Confidence            9999999997643  346666666653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.45  E-value=4.1e-12  Score=97.45  Aligned_cols=171  Identities=19%  Similarity=0.157  Sum_probs=111.9

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCc-cccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~----~~~   73 (246)
                      |||+|.+|++++++|+++| ++|++++|+.++ ......     +.... ..+++++.+|+.|.+++.++++.    .++
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~-----~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVA-----QMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHH-----HHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            7999999999999999995 899999998765 211110     00111 13688999999998876555542    379


Q ss_pred             cEEEecCCCCcc------c------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------E------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~------~------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....      .                  .+.+++++.  +..++|++||...+...         + ....
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~---------~-~~~~  158 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR---------R-SNFV  158 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---------C-CCcc
Confidence            999998876321      0                  122444444  56799999987542110         1 1112


Q ss_pred             ccccHHHHHHH-------HHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RHKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~~~k~~~e~~-------~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      |..+|.....+       ++..++++++++|+.+..+...            .....         ...++.+|+|+.++
T Consensus       159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~~~~~---------~~~~~~~~~A~~i~  217 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------HAKEA---------PLTVDKEDVAKLAV  217 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------cCCCC---------CCCCCHHHHHHHHH
Confidence            33788776643       3457899999999998775210            00000         12467899999999


Q ss_pred             HHhcCCC
Q 025908          201 QVLGNEK  207 (246)
Q Consensus       201 ~~~~~~~  207 (246)
                      ..+.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9998654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=1.2e-12  Score=103.74  Aligned_cols=197  Identities=18%  Similarity=0.161  Sum_probs=120.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcC--CccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAK--GFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~--~~d~vi   77 (246)
                      +||||.+|+-+++.|+++|+.|++++|+..+....+. ..     ....+.+.+..+... .+.+..+.+..  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~-----~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VF-----FVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cc-----ccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            5999999999999999999999999999877543322 00     002455555555543 34444444422  234555


Q ss_pred             ecCCCC-------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCC-CCCccccHHHHHHHHHh
Q 025908           78 DINGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKGKLNTESVLES  141 (246)
Q Consensus        78 ~~~~~~-------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~~~k~~~e~~~~~  141 (246)
                      -+++..             ..+++++++||+  +++|++++|+.+.-.....     ..... .....++|..+|+++++
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~-----~~~~~~~~~~~~~k~~~e~~~~~  233 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP-----PNILLLNGLVLKAKLKAEKFLQD  233 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC-----chhhhhhhhhhHHHHhHHHHHHh
Confidence            554321             226889999988  9999999998776211111     01111 11223789999999999


Q ss_pred             cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC-eeEEee
Q 025908          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR-QVFNIS  216 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~  216 (246)
                      ++++++|+|++...-........     .. ......  ......-..+.-.|+|+.++.++.++...+ .+..++
T Consensus       234 Sgl~ytiIR~g~~~~~~~~~~~~-----~~-~~~~~~--~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v  301 (411)
T KOG1203|consen  234 SGLPYTIIRPGGLEQDTGGQREV-----VV-DDEKEL--LTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELV  301 (411)
T ss_pred             cCCCcEEEeccccccCCCCccee-----cc-cCcccc--ccccccceeeehhhHHHHHHHHHhhhhhccceeEEee
Confidence            99999999999876542111000     00 001111  111111247888999999999998766544 333333

>PRK06484 short chain dehydrogenase; Validated

Probab=99.45  E-value=3.7e-12  Score=107.69  Aligned_cols=191  Identities=16%  Similarity=0.226  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+..+......        .....+..+.+|++|++++.+++++     ..+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAE--------ALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211110        1124567789999999888877754     25899


Q ss_pred             EEecCCCCcc---------------------chHHHHH----hCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD---------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||++|....                     +...+++    .+++..++|++||...+..           ..+...| 
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  415 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----------LPPRNAYC  415 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----------CCCCchhH
Confidence            9999986311                     1112222    2333468999998766421           1122334 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|...+.+.+       ..|++++.+.|+.+.++......  .........+..+.         ..+..++|+|++++
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~  486 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIA  486 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            88998887653       35799999999998876321100  00111111111111         12456899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...++++.+.++.
T Consensus       487 ~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        487 FLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            998653  3467888887764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.45  E-value=3.5e-12  Score=98.42  Aligned_cols=191  Identities=16%  Similarity=0.153  Sum_probs=121.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+..+......        ....++.++.+|+.+.+++.+++++     .++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ--------RFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998655211110        1124578899999998888777753     26899


Q ss_pred             EEecCCCCcc-------------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~-------------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||++|....                         +...++++    ++ ...++|++||...+.+.           ..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  152 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-----------GG  152 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CC
Confidence            9999985310                         01112222    22 23579999987764221           11


Q ss_pred             C-CccccHHHHHHHHHh------cCCceEEeecceeeCCCCCCch----------HHHHHHHHHhCCCcccCCCCCceee
Q 025908          126 K-SRHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQ  188 (246)
Q Consensus       126 ~-~~~~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                      . .|..+|...+.+.+.      .++++..+.|+.+..+......          ...........  .+       ...
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r  223 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--TP-------LQF  223 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--CC-------CCC
Confidence            2 244899988877642      3589999999988765311000          00000111110  11       123


Q ss_pred             eeeHHHHHHHHHHHhcCC---CCCCeeEEeeCCe
Q 025908          189 LGHVKDLARAFVQVLGNE---KASRQVFNISGEK  219 (246)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~  219 (246)
                      +...+|++++++.++...   ...|+.+.+.++.
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            566899999999998643   3467788887764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.45  E-value=1.3e-11  Score=94.73  Aligned_cols=192  Identities=15%  Similarity=0.126  Sum_probs=120.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.+.|++|+++.|......  .     .........+..+.+|++|.+++.+++++     .++|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~--~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET--I-----EQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH--H-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999998876532210  0     01111124578899999999888888864     26999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +...++++    +.  + ..++|++||...+.....          -..|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~Y  158 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----------VPSY  158 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----------Ccch
Confidence            9999986321                    12222332    22  1 257999999876532211          0123


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ..+|...+.+.+       ..|++++.++|+.+..+...... ..........  .++.       ..+...+|+++.+.
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~p~eva~~~~  229 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGLPSDLMGPVV  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcCHHHHHHHHH
Confidence            388988887653       35899999999998776311000 0000111111  1111       12556899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCC
Q 025908          201 QVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~  218 (246)
                      .++.+.  ...|..+.+.++
T Consensus       230 ~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        230 FLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHhCccccCccCcEEEECCC
Confidence            999653  335667766665

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.3e-12  Score=98.72  Aligned_cols=188  Identities=14%  Similarity=0.105  Sum_probs=114.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-------C-
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------G-   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-------~-   72 (246)
                      |||+|+||+++++.|.++|++|++++|.+.+....+..       ....++.++.+|+++.+++.+++++.       + 
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE-------QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh-------ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            79999999999999999999999999976332111110       01256888999999998888877531       1 


Q ss_pred             -ccEEEecCCCCc---------------------cc----hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCC
Q 025908           73 -FDVVYDINGREA---------------------DE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        73 -~d~vi~~~~~~~---------------------~~----~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                       ..++||++|...                     .+    .+.++..+.   ...++|++||...+.           +.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  148 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PY  148 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CC
Confidence             126788876521                     11    223334443   235899999866531           22


Q ss_pred             CCCCcc-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceee
Q 025908          124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                      .+...| .+|...+.+++         ..++++..++|+.+-.+....     ..............     .    ...
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~  219 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-----E----EGK  219 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-----h----cCC
Confidence            223335 88998888763         246889999999776542100     00000000111000     0    112


Q ss_pred             eeeHHHHHHHHHHHhcC-CCCCCeeEEe
Q 025908          189 LGHVKDLARAFVQVLGN-EKASRQVFNI  215 (246)
Q Consensus       189 ~i~~~D~a~~~~~~~~~-~~~~~~~~~~  215 (246)
                      +.+++|+|+.++.++.. ....|+.+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            56789999999999976 3344555544

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.8e-12  Score=99.84  Aligned_cols=177  Identities=17%  Similarity=0.109  Sum_probs=112.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|++|.++++.|+++|++|++++|+..+..+.....       ....+.++.+|+++.+++.++++.      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-------GAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999876522111000       024688999999999888877652      2579


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||++|....                    +...++++    ++  +..++|++||...+....          ....|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y  149 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP----------GLAVY  149 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------Cchhh
Confidence            99999986421                    12223333    23  457899999865431111          11123


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      ..+|...+.+.+       ..+++++.++|+.+..+.............. .           .....+..+|++++++.
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~va~~~~~  217 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGST-K-----------RLGVRLTPEDVAEAVWA  217 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhH-h-----------hccCCCCHHHHHHHHHH
Confidence            378888776553       3579999999998766521110000000000 0           01113567999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++..+
T Consensus       218 ~~~~~  222 (260)
T PRK08267        218 AVQHP  222 (260)
T ss_pred             HHhCC
Confidence            99654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.44  E-value=1.5e-12  Score=90.06  Aligned_cols=132  Identities=21%  Similarity=0.187  Sum_probs=101.1

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      .||||-.|+.+++.+++.+  .+|+++.|+.....+.            ...+.....|...-+++...++  ++|+.++
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            4999999999999999997  5899999986442211            2567777888877777777776  9999999


Q ss_pred             cCCCCc-------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcC
Q 025908           79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (246)
Q Consensus        79 ~~~~~~-------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~  143 (246)
                      +.|...             +....+.++++  ++++|+.+||.++            ++.....|.+.|.++|+-+.+..
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA------------d~sSrFlY~k~KGEvE~~v~eL~  157 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA------------DPSSRFLYMKMKGEVERDVIELD  157 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC------------Ccccceeeeeccchhhhhhhhcc
Confidence            876532             22445566666  8999999999887            22222334489999999998888


Q ss_pred             C-ceEEeecceeeCCC
Q 025908          144 V-NWTSLRPVYIYGPL  158 (246)
Q Consensus       144 ~-~~~ilR~~~i~g~~  158 (246)
                      + .++|+|||.+.+..
T Consensus       158 F~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  158 FKHIIILRPGPLLGER  173 (238)
T ss_pred             ccEEEEecCcceeccc
Confidence            7 57899999999964

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.1e-12  Score=99.74  Aligned_cols=194  Identities=16%  Similarity=0.231  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+.+......     ........++.++.+|+++++++.+++++.     ++|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV-----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     111112245678899999999888877642     5899


Q ss_pred             EEecCCCCc--------------------cchHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREA--------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~--------------------~~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+++...                    .+..++++++    + ...+++++||...+.           +......| 
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------~~~~~~~Y~  158 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------PMPMQAHVC  158 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------CCCCccHHH
Confidence            999987421                    1122333332    2 235899999865431           11122234 


Q ss_pred             ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHH--HHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 ~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|...+.+++.       .+++++.++|+.+.+.........  ........  ..+       ...+...+|+|+.++
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~~~  229 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQ--SVP-------LKRNGTKQDIANAAL  229 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHh--cCC-------CCCCCCHHHHHHHHH
Confidence            889888887642       578999999998765311000000  00001111  111       123556899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...+..+.+.++.
T Consensus       230 ~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        230 FLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHcChhhcCccCCEEEECCCc
Confidence            999753  2356677777764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.3e-12  Score=96.57  Aligned_cols=172  Identities=16%  Similarity=0.156  Sum_probs=112.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|++.+........   ........+.++.+|+++.+++.+++++     .++|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAEL---LARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDR   84 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH---HhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522110000   0000024688899999999888777753     26999


Q ss_pred             EEecCCCCcc--------------------chHHHH----HhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++    +.++  +..++|++||.......          ..+...|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~~Y  154 (248)
T PRK08251         85 VIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------PGVKAAY  154 (248)
T ss_pred             EEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------CCCcccH
Confidence            9999985321                    111222    2222  56789999986653211          1122334


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++..         ...   ..         ....++.+|.|+.++.
T Consensus       155 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~---------~~~---~~---------~~~~~~~~~~a~~i~~  213 (248)
T PRK08251        155 AASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN---------AKA---KS---------TPFMVDTETGVKALVK  213 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh---------hcc---cc---------CCccCCHHHHHHHHHH
Confidence             88988876553       2478999999998876521         000   00         1135678999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      .++.+
T Consensus       214 ~~~~~  218 (248)
T PRK08251        214 AIEKE  218 (248)
T ss_pred             HHhcC
Confidence            99764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.3e-12  Score=98.32  Aligned_cols=136  Identities=15%  Similarity=0.122  Sum_probs=96.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---------C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---------~   71 (246)
                      |||+|+||+++++.|+++|++|++++|+..+....          ....++.++.+|+.+.+++.+++.+         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA----------AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhh----------ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            79999999999999999999999999986542100          0124688899999999888875542         2


Q ss_pred             CccEEEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        72 ~~d~vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      .+|++||+++....                     +    .+.+++.+.  +..++|++||...+.+           ..
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~  145 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA-----------YA  145 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC-----------CC
Confidence            57999999875321                     1    223344443  4569999999776421           12


Q ss_pred             CCCcc-ccHHHHHHHHH------hcCCceEEeecceeeCC
Q 025908          125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~------~~~~~~~ilR~~~i~g~  157 (246)
                      +...| .+|...|.+++      ..++++..++|+.+-.+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            23345 88999888775      24799999999987554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.44  E-value=4.5e-12  Score=97.63  Aligned_cols=193  Identities=19%  Similarity=0.219  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|+++.|+.....+...     +... ..++..+.+|++|.+++.+++++     .++|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKALK-----ELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221111     0000 13578899999999888887753     26999


Q ss_pred             EEecCCCCcc--------c------------------hHHHHHh-CC--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------E------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~--------~------------------~~~l~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +||++|....        .                  ...++.. ++  +..++|++||.....+           ..+.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  148 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----------MPPL  148 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----------CCCc
Confidence            9999985210        0                  1112222 21  3468999998766321           1112


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH----------HH-HHHHHHhCCCcccCCCCCcee
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EW-FFHRLKAGRPIPIPGSGIQVT  187 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~  187 (246)
                      ..| .+|...+.+.+       ..|++++.+.|+.+-.+.......          .. .......  ..+       ..
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-------~~  219 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE--RTP-------LK  219 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc--cCC-------cc
Confidence            234 78888877654       357899999999876663110000          00 0000000  011       11


Q ss_pred             eeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .+..++|+|++++.++...  ...|.+..+.++.
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            2556899999999998743  4467777777764

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.3e-12  Score=97.93  Aligned_cols=181  Identities=15%  Similarity=0.155  Sum_probs=112.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+||.++++.|.++|++|++++|+...........  ...+......++.++.+|+++++++.+++++.     ++
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   91 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGI   91 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865421110000  00111122346888999999999888877642     79


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||+++....                    +...+++++.      +..+++++||.....         .....+..
T Consensus        92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------~~~~~~~~  162 (273)
T PRK08278         92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------PKWFAPHT  162 (273)
T ss_pred             CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------ccccCCcc
Confidence            999999986321                    2223444432      235788888643210         01012233


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|..+|.+++       ..+++++.+.|+.+....        .......+.        .....+...+|+|+++
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--------~~~~~~~~~--------~~~~~~~~p~~va~~~  226 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--------AVRNLLGGD--------EAMRRSRTPEIMADAA  226 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--------HHHhccccc--------ccccccCCHHHHHHHH
Confidence            45 89999998764       247999999998422210        111110111        0112356789999999


Q ss_pred             HHHhcCC
Q 025908          200 VQVLGNE  206 (246)
Q Consensus       200 ~~~~~~~  206 (246)
                      +.++...
T Consensus       227 ~~l~~~~  233 (273)
T PRK08278        227 YEILSRP  233 (273)
T ss_pred             HHHhcCc
Confidence            9998654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.43  E-value=3.5e-12  Score=99.88  Aligned_cols=173  Identities=15%  Similarity=0.164  Sum_probs=113.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+.....+..     .........+.++.+|+.|.+++.++++.     .++|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     01111124577899999999988887762     27899


Q ss_pred             EEecCCCCcc----------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                      +    ++.++..+.  +..++|++||.+++...        .+ ....
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~p-~~~~  191 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------SP-LFSV  191 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------CC-Ccch
Confidence            9999986321                      0    111222232  45799999987654210        01 1122


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      |..+|...+.+++       +.+++++.++|+.+-.+...            ....    ..   ....++.+++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~------------~~~~----~~---~~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA------------PTKA----YD---GLPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc------------cccc----cc---CCCCCCHHHHHHHHH
Confidence            4488988877653       35899999999976555210            0000    00   112467899999999


Q ss_pred             HHhcCC
Q 025908          201 QVLGNE  206 (246)
Q Consensus       201 ~~~~~~  206 (246)
                      .+++++
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            999764

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1e-11  Score=95.94  Aligned_cols=197  Identities=19%  Similarity=0.223  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-h-cCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|.||.++++.|+++|++|++++|+..+..+...     .... . ...+..+.+|++|.+++.+++++     .++
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAEA-----RLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998755321110     0000 0 13577899999999888777653     258


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....                        .++.++..++  +..++|++||...+....          ....
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  158 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------HMVA  158 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC----------CchH
Confidence            999999986321                        0223334343  356899999876542211          1112


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch---------HHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                      |..+|...+.+.+       ..|++++.++|+.+..+.....+         ...+.........++       ...+..
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~  231 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGR  231 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCC
Confidence            3367777665542       36899999999988765311000         000000000001111       112456


Q ss_pred             HHHHHHHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .+|+|++++.++..  ....|+++.+.++.
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            89999999998864  23467788887764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.43  E-value=2.5e-12  Score=111.06  Aligned_cols=202  Identities=17%  Similarity=0.195  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+.........     ....  ....+..+.+|++|.+++.+++++.     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~-----~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAA-----EINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999997654211100     0000  0135778999999999998888642     69


Q ss_pred             cEEEecCCCCccc------------------------hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        74 d~vi~~~~~~~~~------------------------~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |+|||++|.....                        .+.++..+.  + ..++|++||...+...           ...
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----------~~~  563 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----------KNA  563 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----------CCC
Confidence            9999999863211                        112222232  2 3479999986543211           112


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeC-CCCCCchHHHHHHHHH-hCCC----cccCCCCCceeeeeeH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVEEWFFHRLK-AGRP----IPIPGSGIQVTQLGHV  192 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g-~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~i~~  192 (246)
                      ..| .+|...+.+++       ..+++++.++|+.++. .+.....  +...... .+..    ............+++.
T Consensus       564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~p  641 (676)
T TIGR02632       564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLLKRHIFP  641 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCCcCCCcCH
Confidence            234 89999888764       2479999999998873 2211100  0000000 0000    0000011112346789


Q ss_pred             HHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          193 KDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|+|+++..++...  ...|.++++.++..
T Consensus       642 eDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       642 ADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            99999999988643  34578899988754

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.41  E-value=6.9e-12  Score=99.55  Aligned_cols=179  Identities=17%  Similarity=0.210  Sum_probs=114.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|.++|++|+++.|+..+..+...     +.......+.++.+|++|.+++.++++.     .++|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~-----~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVAE-----ECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998655321110     1111234677889999999988887753     36899


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +.    +.++..+.  +..++|++||...+...          +....|.
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~----------p~~~~Y~  157 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ----------PYAAAYS  157 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC----------CCchhHH
Confidence            9999985321                    11    11222222  34689999987654221          1112244


Q ss_pred             ccHHHHHHHHH-------h-cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       . .+++++.+.|+.+.+|......      .. .+...      ......++.+|+|++++.
T Consensus       158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~-~~~~~------~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NY-TGRRL------TPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------cc-ccccc------cCCCCCCCHHHHHHHHHH
Confidence            78887554432       2 3799999999998887421100      00 00100      011235689999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++.++.
T Consensus       225 ~~~~~~  230 (330)
T PRK06139        225 LADRPR  230 (330)
T ss_pred             HHhCCC
Confidence            998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.40  E-value=6.9e-12  Score=98.43  Aligned_cols=182  Identities=23%  Similarity=0.243  Sum_probs=114.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|+..+.......     .. ....+..+.+|++|.+++.+++++     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~-----l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE-----LG-GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211110     00 013456677999999888877753     36899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      |||++|....                    +...++++    +. ...++|++||...+....           ....| 
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~  157 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------GMAAYC  157 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------CchHHH
Confidence            9999986321                    11122222    22 335899999877653211           12234 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHH-HHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       ..++.++.+.|+.+..+........ .....+....+.+       ...+++++|+++++..
T Consensus       158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~  230 (296)
T PRK05872        158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVEKCAAAFVD  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHHHHHHHHHH
Confidence            88988887663       3689999999998876531110000 1111111111111       1235679999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++...
T Consensus       231 ~~~~~  235 (296)
T PRK05872        231 GIERR  235 (296)
T ss_pred             HHhcC
Confidence            99764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.40  E-value=3.1e-12  Score=101.64  Aligned_cols=152  Identities=16%  Similarity=0.188  Sum_probs=98.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||.++++.|+++|++|++++|+..+........     ......+.++.+|+++.+++.+++++     .++|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL-----GIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            799999999999999999999999999765532111100     00124688899999999988887763     25999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--C--CceEEEEeecceeccCC--C--CCC-----
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD--L--LPH-----  117 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~--~--~~~-----  117 (246)
                      +||+||....                     +    ++.++..+.  +  ..|+|++||...+....  .  .+.     
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            9999985211                     1    112223232  2  35999999976643110  0  000     


Q ss_pred             ---------------CCCCCCCCCCcc-ccHHHHHHHH----Hh----cCCceEEeecceeeCC
Q 025908          118 ---------------CETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP  157 (246)
Q Consensus       118 ---------------~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~ilR~~~i~g~  157 (246)
                                     .+..+..|...| .+|...+.+.    ++    .+++++.++||.+++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                           011223444446 8998765443    22    4799999999999864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.39  E-value=6.8e-11  Score=90.65  Aligned_cols=191  Identities=9%  Similarity=0.030  Sum_probs=119.3

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+  +-||+++++.|+++|++|++..|+. +..+.+.+.       ....+..+.+|++|+++++++++.     .++
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKL-------VDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhh-------ccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            6898  7999999999999999999998863 211111110       023577899999999888777643     258


Q ss_pred             cEEEecCCCCcc------------------------c----hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +    ++.++..+.+..++|++||......           ...
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----------~~~  153 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-----------IPN  153 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-----------CCc
Confidence            999999985310                        0    1122233333358899987654211           111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..|++++.+.||.+-.+...... ............+.         ..+..++|++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  224 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD---------GVGVTIEEVG  224 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc---------cCCCCHHHHH
Confidence            1234 88998887763       36899999999998776311100 11122222111111         1255689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++..++...  ...++++.+.++.
T Consensus       225 ~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        225 NTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             HHHHHHhCcccccccccEEEeCCce
Confidence            9999998653  3457777777663

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.6e-11  Score=95.06  Aligned_cols=154  Identities=14%  Similarity=0.027  Sum_probs=99.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.++|++|++++|+..+..+.....   ........+.++.+|+.|.+++.+++++     .++|+
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l---~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~   96 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI---RTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHL   96 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---HHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            799999999999999999999999999876532211100   0000023688899999999888877653     25899


Q ss_pred             EEecCCCCcc--------c---------------hHHHHHhCC-CCceEEEEeecceecc-CCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------E---------------VEPILDALP-NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------~---------------~~~l~~a~~-~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||....        +               ++.++..++ +..++|++||...+.. .......+..+..+...| 
T Consensus        97 li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~  176 (313)
T PRK05854         97 LINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRAYS  176 (313)
T ss_pred             EEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhhhH
Confidence            9999986321        1               122333333 4468999998765322 111122222233334445 


Q ss_pred             ccHHHHHHHHH---------hcCCceEEeecceeeCC
Q 025908          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       130 ~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~  157 (246)
                      .+|...+.+.+         ..++.++.+.||.+..+
T Consensus       177 ~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        177 QSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            88988876543         13689999999988665

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.37  E-value=1.7e-11  Score=94.61  Aligned_cols=193  Identities=15%  Similarity=0.164  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|+++|++|+++.|+.....+...        .....+..+.+|+.+.+++.+++++     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA--------AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987654221111        0124578899999998888777753     26899


Q ss_pred             EEecCCCCc--------c-----------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREA--------D-----------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~--------~-----------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||++|...        .                 +...+++++    . ...++|++||...+.+.           ..
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  151 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----------GG  151 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----------CC
Confidence            999997521        0                 011223332    1 22468888876553111           11


Q ss_pred             C-CccccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchH---HH----H-HHHHHhCCCcccCCCCCceeeee
Q 025908          126 K-SRHKGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVE---EW----F-FHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       126 ~-~~~~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~---~~----~-~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      . .|..+|...+.+.+.      ..++++.+.|+.+..+.......   ..    . .....+. ..+       ...+.
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------~~r~~  223 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP-------IGRMP  223 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-------CCCCC
Confidence            1 234889999877642      23889999999987763211000   00    0 0000010 011       11245


Q ss_pred             eHHHHHHHHHHHhcCC---CCCCeeEEeeCCee
Q 025908          191 HVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  220 (246)
                      ..+|+|++++.++.++   ...+.++.+.++..
T Consensus       224 ~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       224 DAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             ChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence            6899999999988653   23677888877643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.37  E-value=8.3e-12  Score=96.35  Aligned_cols=176  Identities=16%  Similarity=0.145  Sum_probs=111.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|++|.++++.|+++|++|++++|+..+......     +. ....++.++.+|+.|.+++..+++.    ..+|++
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-----RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999998654221110     00 1134788999999999888776652    268999


Q ss_pred             EecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccc
Q 025908           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK  130 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  130 (246)
                      ||++|....                    +...++++    +.  +..+++++||...+.+.          .....|..
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~Y~~  154 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY----------PGYASYCA  154 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC----------CCccHHHH
Confidence            999986321                    12223333    22  34678888875542111          01122337


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...+.+++       ..+++++.+.|+.+.++...         .. ... ..    ........+++|+|+.++.++
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~-~~~-~~----~~~~~~~~~~~~va~~i~~~~  219 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EA-VQA-LN----RALGNAMDDPEDVAAAVLQAI  219 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hh-ccc-cc----ccccCCCCCHHHHHHHHHHHH
Confidence            8887765542       35789999999877655210         00 000 00    000113567899999999999


Q ss_pred             cCCC
Q 025908          204 GNEK  207 (246)
Q Consensus       204 ~~~~  207 (246)
                      +++.
T Consensus       220 ~~~~  223 (263)
T PRK09072        220 EKER  223 (263)
T ss_pred             hCCC
Confidence            8753

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.9e-11  Score=94.15  Aligned_cols=199  Identities=11%  Similarity=0.078  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~   78 (246)
                      |||+|.+|.++++.|+++|++|++++|+..+......     +... ...++.++.+|+++++++.++++.. .+|++||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAA-----DLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            6999999999999999999999999998654221110     0000 1246788999999999998888753 5999999


Q ss_pred             cCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           79 INGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        79 ~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      +++....                    +    .+.++..+.  +..++|++||....           .+......| .+
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~as  156 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGSAG  156 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhHHH
Confidence            9986321                    1    112222333  33578888875431           111122234 67


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh---CCC--cccCCCCCceeeeeeHHHHHHHH
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRP--IPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      |...+.+.+       ..+++++.+.||.+..+..     ..++.....   +..  ............+..++|+|+++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM-----LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH-----HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            888776654       3589999999998876521     111100000   000  00000000011356789999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCee
Q 025908          200 VQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +.++...  ...|..+.+.++..
T Consensus       232 ~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        232 AFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             HHHcCchhccccCceEEecCCee
Confidence            9998643  34677888887743

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.36  E-value=2.1e-11  Score=94.34  Aligned_cols=195  Identities=13%  Similarity=0.110  Sum_probs=114.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHH----HHhhhc-----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA-----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~----~~~~~~-----   70 (246)
                      |||+|+||.++++.|+++|++|+++.|+.......+..    +... ....+..+.+|++|.+.+    .++++.     
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAA----ELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH----HHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            79999999999999999999999987654321111100    0000 013466789999997644    333321     


Q ss_pred             CCccEEEecCCCCcc-------------------------------chHHHHHh----CC-C-------CceEEEEeecc
Q 025908           71 KGFDVVYDINGREAD-------------------------------EVEPILDA----LP-N-------LEQFIYCSSAG  107 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~-------------------------------~~~~l~~a----~~-~-------~~~~i~~Ss~~  107 (246)
                      .++|+|||++|....                               +...++++    +. .       ..+++.+||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            269999999985210                               01112222    11 0       12466666543


Q ss_pred             eeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCccc
Q 025908          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (246)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                      ..           .+..+...| .+|..++.+.+       ..|++++.++|+.+..|.....   ..........++  
T Consensus       163 ~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~~~~--  226 (267)
T TIGR02685       163 TD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRKVPL--  226 (267)
T ss_pred             cc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch---hHHHHHHHhCCC--
Confidence            31           122222334 89999987764       3589999999998876633211   111122111111  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          180 PGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                       +     ..+...+|++++++.++...  ...+..+.+.++..+
T Consensus       227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence             1     12346899999999998653  336777778776543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.8e-11  Score=90.47  Aligned_cols=161  Identities=17%  Similarity=0.178  Sum_probs=107.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|.+|.++++.|.++ ++|+++.|+..                      .+.+|+++.+++++++++. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 99999988632                      2578999999998888754 69999999


Q ss_pred             CCCCcc--------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           80 NGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      +|....                    +..++++++    .+..+++++||.....           +......| .+|..
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~~sK~a  131 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PIPGGASAATVNGA  131 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CCCCchHHHHHHHH
Confidence            986321                    112333332    2345788888755421           11112234 77887


Q ss_pred             HHHHHH------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          135 TESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       135 ~e~~~~------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      .+.+.+      ..+++++.+.|+.+-.+.      ..      ....+  ..     ..++..+|+|+.+..+++.. .
T Consensus       132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~------~~------~~~~~--~~-----~~~~~~~~~a~~~~~~~~~~-~  191 (199)
T PRK07578        132 LEGFVKAAALELPRGIRINVVSPTVLTESL------EK------YGPFF--PG-----FEPVPAARVALAYVRSVEGA-Q  191 (199)
T ss_pred             HHHHHHHHHHHccCCeEEEEEcCCcccCch------hh------hhhcC--CC-----CCCCCHHHHHHHHHHHhccc-e
Confidence            776553      357899999998764431      00      00101  11     23578999999999999764 3


Q ss_pred             CCeeEEe
Q 025908          209 SRQVFNI  215 (246)
Q Consensus       209 ~~~~~~~  215 (246)
                      .++++++
T Consensus       192 ~g~~~~~  198 (199)
T PRK07578        192 TGEVYKV  198 (199)
T ss_pred             eeEEecc
Confidence            5666664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.8e-11  Score=106.42  Aligned_cols=172  Identities=15%  Similarity=0.177  Sum_probs=116.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|+++|++|++++|+.....+...     +......++.++.+|+.|.+++.+++++.     ++|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELVA-----EIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998655221110     01111246888999999999888887632     6999


Q ss_pred             EEecCCCCcc----------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                      +    ++.++..+.  +..++|++||...+....          ....
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~  521 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----------RFSA  521 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------Ccch
Confidence            9999985311                      0    112233333  457899999988764211          1112


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      |..+|...+.+.+       ..+++++.++|+.+..+.....            ...   .    ....++.+++|+.++
T Consensus       522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~~---~----~~~~~~~~~~a~~i~  582 (657)
T PRK07201        522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KRY---N----NVPTISPEEAADMVV  582 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------ccc---c----CCCCCCHHHHHHHHH
Confidence            3488998887763       3589999999999877632110            000   0    122467899999999


Q ss_pred             HHhcCC
Q 025908          201 QVLGNE  206 (246)
Q Consensus       201 ~~~~~~  206 (246)
                      ..+...
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            987653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.35  E-value=2.5e-11  Score=91.44  Aligned_cols=139  Identities=19%  Similarity=0.168  Sum_probs=93.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---CCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~vi   77 (246)
                      |||+|++|+++++.|.++|++|++++|++.+... +..         ..++.++.+|++|.+++.++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---------LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---------ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            7999999999999999999999999998765321 111         24677889999998888777753   3699999


Q ss_pred             ecCCCCcc----------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           78 DINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        78 ~~~~~~~~----------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      |++|....                      +...++++    ++ +..+++++||...  ....      .+......| 
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g--~~~~------~~~~~~~~Y~  148 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLG--SVEL------PDGGEMPLYK  148 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcc--cccc------CCCCCccchH
Confidence            99876311                      12223333    23 3357777876432  1110      111122234 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCC
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~  157 (246)
                      .+|...+.+++       ..+++++.++||.+-.+
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            88999988764       25689999999987665

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=1e-10  Score=89.86  Aligned_cols=194  Identities=14%  Similarity=0.086  Sum_probs=117.4

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccC----CCC--CCchhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ----LPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~----~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||+|  .||.++++.|+++|++|++..|........    ...  ....+..+....+..+.+|+++.+++.++++.  
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~   91 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT   91 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            69985  799999999999999998876542110000    000  00011112234678899999999888877753  


Q ss_pred             ---CCccEEEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC
Q 025908           71 ---KGFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        71 ---~~~d~vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                         ..+|++||+++.....                        .+.++..+.  +..++|++||.....           
T Consensus        92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------  160 (256)
T PRK12859         92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-----------  160 (256)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----------
Confidence               1489999999863210                        122333333  345899999866531           


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      +..+...| .+|...+.+.+       ..+++++.++|+.+-.+....    .....+....+.         ..+...+
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~~---------~~~~~~~  227 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFPF---------GRIGEPK  227 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCCC---------CCCcCHH
Confidence            11122334 88888877653       367999999999876653111    111111111111         1234589


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      |+++++..++...  ...|+++.+.++
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCC
Confidence            9999999988653  335667766665

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=4e-11  Score=94.52  Aligned_cols=206  Identities=15%  Similarity=0.088  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|.||.++++.|+++|++|++..|......+...    .+.......+..+.+|+.|.+.+.++++.    .++|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~----~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVL----DEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999998875432111110    11111134688899999999888877753    268999


Q ss_pred             EecCCCCcc--------------------chHHHHHhC----C-C--------CceEEEEeecceeccCCCCCCCCCCCC
Q 025908           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a~----~-~--------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                      ||++|....                    +...+++++    . .        ..++|++||...+...          .
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  163 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----------V  163 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------C
Confidence            999986321                    122233322    1 1        1489999986653211          1


Q ss_pred             CCCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          124 DPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       124 ~~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ....|..+|..++.+.+       ..|++++.+.|+. ..+     .....+    ......    ......++.++|++
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-----~~~~~~----~~~~~~----~~~~~~~~~pe~va  229 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-----MTADVF----GDAPDV----EAGGIDPLSPEHVV  229 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-----hhhhhc----cccchh----hhhccCCCCHHHHH
Confidence            11234488998887653       3578998888873 111     000000    000000    00112345789999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCC------------------eeecHHHHHHHHHHHh
Q 025908          197 RAFVQVLGNE--KASRQVFNISGE------------------KYVTFDGLARACAKVT  234 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~------------------~~~s~~~l~~~~~~~~  234 (246)
                      +++..++...  ...|++|.+.++                  .+++..++.+.+.+.+
T Consensus       230 ~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        230 PLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             HHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            9999888642  245666666543                  3478888888888874

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.9e-11  Score=92.96  Aligned_cols=179  Identities=14%  Similarity=0.087  Sum_probs=109.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCC--HHHHHHhhh----c--C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~--~~~~~~~~~----~--~   71 (246)
                      |||+|++|+++++.|+++|++|++++|+..+......     +... ....+..+.+|+.+  .+++.++++    .  .
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD-----AIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-----HHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            6999999999999999999999999998755211100     0000 01345677889864  334443331    1  2


Q ss_pred             CccEEEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           72 GFDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        72 ~~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      ++|+|||+++....                     +...++++    +.  +..+++++||....           .+..
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~  155 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------TPKA  155 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------cCCC
Confidence            68999999985210                     11223333    22  35689999875432           1111


Q ss_pred             CCCcc-ccHHHHHHHHHh-------c-CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLES-------K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~-------~-~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|...+.+++.       . +++++.++||.+.+|.....         ..       +  .....+...+|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~-------~--~~~~~~~~~~~~  217 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HP-------G--EAKSERKSYGDV  217 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CC-------C--CCccccCCHHHH
Confidence            22234 899998887632       2 58999999999988731100         00       0  111234678999


Q ss_pred             HHHHHHHhcC--CCCCCeeE
Q 025908          196 ARAFVQVLGN--EKASRQVF  213 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~  213 (246)
                      +..+..++..  ....|++.
T Consensus       218 ~~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        218 LPAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             HHHHHHHhCccccCcCCeEe
Confidence            9999999963  33345443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1e-10  Score=90.81  Aligned_cols=204  Identities=14%  Similarity=0.095  Sum_probs=119.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      ||| |.||+++++.|. +|++|++++|+..+..+...     +.......+.++.+|++|.+++.++++.    .++|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAK-----TLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            576 789999999996 89999999997654211110     0111123578899999999988888763    369999


Q ss_pred             EecCCCCcc-------------chHHHHHh----CCCCceEEEEeecceeccCC-----CC---CCCCC----C----CC
Q 025908           77 YDINGREAD-------------EVEPILDA----LPNLEQFIYCSSAGVYLKSD-----LL---PHCET----D----TV  123 (246)
Q Consensus        77 i~~~~~~~~-------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~-----~~---~~~e~----~----~~  123 (246)
                      ||++|....             +...++++    +....+.|++||........     ..   .....    .    +.
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            999986421             12223333    22224567777765432110     00   00000    0    00


Q ss_pred             ---CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch---HHHHHHHHHhCCCcccCCCCCceeee
Q 025908          124 ---DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       124 ---~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                         .+...| .+|...+.+.+       ..+++++.+.||.+..+.....+   .......+....++         ..+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA---------GRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc---------ccC
Confidence               112335 89998877653       35799999999998776321100   00111111111111         125


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ...+|+|++++.++...  ...++.+.+.++..
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            66899999999998542  34677888887753

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1e-10  Score=87.98  Aligned_cols=172  Identities=17%  Similarity=0.120  Sum_probs=111.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---CCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~vi   77 (246)
                      |||+|.+|+++++.|++.|++|++++|+..+.. .+.          ..+++++.+|+++.+.+.+++++   .++|++|
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQ----------ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HHH----------hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999999999865421 111          13567899999999888876532   3589999


Q ss_pred             ecCCCCc----------------------cchHHHHHhC----C-CCceEEEEeecc-eeccCCCCCCCCCCCCCC-CCc
Q 025908           78 DINGREA----------------------DEVEPILDAL----P-NLEQFIYCSSAG-VYLKSDLLPHCETDTVDP-KSR  128 (246)
Q Consensus        78 ~~~~~~~----------------------~~~~~l~~a~----~-~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~-~~~  128 (246)
                      |+++...                      .++..+++++    . ...+++++||.. .++..         +..+ ..|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~~Y  146 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTTGWLY  146 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCCcccc
Confidence            9988631                      0122333332    2 234688888754 33321         1111 124


Q ss_pred             cccHHHHHHHHHh-----cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          129 HKGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       129 ~~~k~~~e~~~~~-----~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      ..+|...+.+++.     .+++++.++|+.+..+...                     +    ..++..++.++.+..++
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~  201 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVI  201 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHH
Confidence            4889998887753     3678899999987665210                     0    11346788888888877


Q ss_pred             cCC--CCCCeeEEeeC
Q 025908          204 GNE--KASRQVFNISG  217 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~  217 (246)
                      ...  ...+..|...+
T Consensus       202 ~~~~~~~~~~~~~~~~  217 (222)
T PRK06953        202 AQATRRDNGRFFQYDG  217 (222)
T ss_pred             HhcCcccCceEEeeCC
Confidence            543  22344444443

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.32  E-value=4.9e-11  Score=89.73  Aligned_cols=173  Identities=14%  Similarity=0.150  Sum_probs=113.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|.+|+++++.|.++|++|+++.|+.++......          ..++.++.+|+++++++.+++++.  ++|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            6999999999999999999999999997654211111          124678899999999988887632  5899999


Q ss_pred             cCCCCc--------------cc---------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           79 INGREA--------------DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        79 ~~~~~~--------------~~---------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +++...              ..               ++.++..++...++|++||...             + ....|.
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------------~-~~~~Y~  141 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------------P-AGSAEA  141 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------------C-CccccH
Confidence            986310              00               1112222232358999987541             0 112244


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.+.||.+..+.         ....   ...+          .-..+|+++.+..+
T Consensus       142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---------~~~~---~~~p----------~~~~~~ia~~~~~l  199 (223)
T PRK05884        142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---------YDGL---SRTP----------PPVAAEIARLALFL  199 (223)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh---------hhhc---cCCC----------CCCHHHHHHHHHHH
Confidence            88888877653       367999999999875541         0110   0000          11589999999999


Q ss_pred             hcCC--CCCCeeEEeeCCe
Q 025908          203 LGNE--KASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~  219 (246)
                      +...  ...++++.+.++.
T Consensus       200 ~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        200 TTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             cCchhhccCCcEEEeCCCe
Confidence            8643  3467777777764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.32  E-value=3.3e-11  Score=93.46  Aligned_cols=181  Identities=17%  Similarity=0.138  Sum_probs=109.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|.+|.++++.|.++|++|+++.|+.+.......     +.... ...+.++.+|+.+++++.+++++     .++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVA-----DARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999987644211110     00000 12345578999998888776653     2589


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC---CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      ++||++|....                    +...++++    +.   ...++|++||...+.+.         + ....
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------~-~~~~  150 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------P-WHAA  150 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------C-CCcc
Confidence            99999986321                    12223333    21   24589999986543111         0 1112


Q ss_pred             ccccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCch------HHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          128 RHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       128 ~~~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      |..+|...+.+.       ...++++++++|+.+.++......      ..........          ......++.+|
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~  220 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPEK  220 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHHH
Confidence            337777665544       246899999999999887421100      0000000000          00123468999


Q ss_pred             HHHHHHHHhcCC
Q 025908          195 LARAFVQVLGNE  206 (246)
Q Consensus       195 ~a~~~~~~~~~~  206 (246)
                      +|+.++.++..+
T Consensus       221 vA~~~~~~~~~~  232 (272)
T PRK07832        221 AAEKILAGVEKN  232 (272)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.30  E-value=4.4e-12  Score=96.61  Aligned_cols=191  Identities=23%  Similarity=0.300  Sum_probs=123.4

Q ss_pred             Ccc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCc
Q 025908            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (246)
Q Consensus         2 Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~   73 (246)
                      |++  +-||.++++.|+++|++|++..|+..+....+..     ... ..+.+++.+|++++++++++++.      .++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~-----l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEE-----LAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHH-----HHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----HHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            666  9999999999999999999999998763111110     000 12355799999999888877654      479


Q ss_pred             cEEEecCCCCcc----c------------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~----~------------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+++....    .                        .+.++..++...++|++||......           ...
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------~~~  143 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------MPG  143 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------STT
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------Ccc
Confidence            999999875432    0                        1122222233468999998765211           111


Q ss_pred             CCcc-ccHHHHHHHHH-------h-cCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ...| .+|..++.+.+       . .||++..|.||.+..+.... .....+........++   +      .+..++|+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---~------r~~~~~ev  214 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---G------RLGTPEEV  214 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---S------SHBEHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---C------CCcCHHHH
Confidence            2234 78988887763       4 68999999999887652000 0012223333332322   1      13469999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      |++++.++...  ...|+++.+.+|
T Consensus       215 A~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  215 ANAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHHhCccccCccCCeEEECCC
Confidence            99999999754  457888888876

...

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.28  E-value=5.7e-10  Score=78.77  Aligned_cols=196  Identities=17%  Similarity=0.182  Sum_probs=122.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc---cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+.-||++++..|.++|++|.+.+++.....   ..+..         ..+...+.||+.++++++..+++     ..
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---------~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---------YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---------CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            699999999999999999999999998876532   12221         24677789999998777665543     26


Q ss_pred             ccEEEecCCCCccc------------------------hHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~d~vi~~~~~~~~~------------------------~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      ++++++|||.+.+.                        ++...+++-    +--++|.+||.-  |...+.-.+......
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV--GkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV--GKIGNFGQTNYAASK  168 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh--cccccccchhhhhhc
Confidence            99999999986542                        222333311    223899999743  222111111000000


Q ss_pred             CCCccccHHHHHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      ..-..-+|..+ +.+...+|++..+-|+.+-.|.- ....+..+..+....|+...+.         .+|+|..++.+..
T Consensus       169 ~GvIgftktaA-rEla~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fLAS  237 (256)
T KOG1200|consen  169 GGVIGFTKTAA-RELARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFLAS  237 (256)
T ss_pred             CceeeeeHHHH-HHHhhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccccCC---------HHHHHHHHHHHhc
Confidence            00011234444 33455789999999999888731 1223345566655555544444         7999999999885


Q ss_pred             CC--CCCCeeEEeeCC
Q 025908          205 NE--KASRQVFNISGE  218 (246)
Q Consensus       205 ~~--~~~~~~~~~~~~  218 (246)
                      ..  ...+..+.++++
T Consensus       238 ~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  238 DASSYITGTTLEVTGG  253 (256)
T ss_pred             cccccccceeEEEecc
Confidence            43  235667777665

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=6.5e-11  Score=90.51  Aligned_cols=172  Identities=14%  Similarity=0.122  Sum_probs=105.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCC--CHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRK--DYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~--~~~~~~~~~~~-----~~   72 (246)
                      |||+|++|.++++.|++.|++|++++|+..+......     +... ....+.++.+|++  +.+++.++++.     ..
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD-----EIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654211110     0000 0235677788886  45544443321     26


Q ss_pred             ccEEEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|+|||+++....                     +...++++    +.  +..+||++||.......           ..
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-----------AN  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----------CC
Confidence            8999999875211                     12223333    22  56789999986543111           11


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...| .+|...+.+++       ..+++++.++|+.+-++....         .....         ....+...+|+++
T Consensus       162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~---------~~~~~~~~~~~~~  223 (247)
T PRK08945        162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---------AFPGE---------DPQKLKTPEDIMP  223 (247)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---------hcCcc---------cccCCCCHHHHHH
Confidence            1234 88988887663       246888899998775542100         00000         0123567899999


Q ss_pred             HHHHHhcCC
Q 025908          198 AFVQVLGNE  206 (246)
Q Consensus       198 ~~~~~~~~~  206 (246)
                      .+..++...
T Consensus       224 ~~~~~~~~~  232 (247)
T PRK08945        224 LYLYLMGDD  232 (247)
T ss_pred             HHHHHhCcc
Confidence            999988643

>PRK05855 short chain dehydrogenase; Validated

Probab=99.28  E-value=2.6e-11  Score=103.92  Aligned_cols=187  Identities=16%  Similarity=0.065  Sum_probs=115.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|.++|++|++++|+..+..+...     .......++.++.+|++|++++.+++++     ..+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAE-----LIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            6999999999999999999999999998654221100     0111124688999999999988887763     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +..+++++    +.  + ..++|++||...+.....          ...|
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------~~~Y  465 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS----------LPAY  465 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----------CcHH
Confidence            9999987321                    11222222    22  2 258999999887643211          1124


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHH---HHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF---HRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..+|...+.+.+       ..|++++.++||.+-.+...........   .............     ......+|+|+.
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~va~~  540 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-----RRGYGPEKVAKA  540 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-----ccCCCHHHHHHH
Confidence            488998877653       3589999999998866521110000000   0000000000000     112467999999


Q ss_pred             HHHHhcCCC
Q 025908          199 FVQVLGNEK  207 (246)
Q Consensus       199 ~~~~~~~~~  207 (246)
                      ++.++..+.
T Consensus       541 ~~~~~~~~~  549 (582)
T PRK05855        541 IVDAVKRNK  549 (582)
T ss_pred             HHHHHHcCC
Confidence            999998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=1.8e-09  Score=83.73  Aligned_cols=194  Identities=13%  Similarity=0.142  Sum_probs=117.0

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||++  -||+++++.|.++|++|++..|+... .+.+.     +..........+.+|++|.+++.+++++     .++
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~-----~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVK-----PLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHH-----HHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            79986  89999999999999999998886422 11110     0000012234688999999888877753     269


Q ss_pred             cEEEecCCCCcc------------------------c----hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +    ++.++..+....++|++||......         .+ ..
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~---------~~-~~  156 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV---------MP-NY  156 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc---------CC-cc
Confidence            999999986320                        0    1112222222257999988654211         01 11


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..|..+|..++.+.+       ..|++++.+.||.+-.+..... .............++         ..+...+|+|+
T Consensus       157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva~  227 (271)
T PRK06505        157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVGG  227 (271)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHHH
Confidence            123488988877653       3689999999998877531110 000111111111111         12346899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...++.+.+.++.
T Consensus       228 ~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        228 SALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHhCccccccCceEEeecCCc
Confidence            999998643  3467788887764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=8e-10  Score=85.20  Aligned_cols=193  Identities=11%  Similarity=0.089  Sum_probs=116.4

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||  ++.||+++++.|.++|++|++..|.... .+.+.+     ..........+.+|++|+++++++++.     .++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERVRK-----MAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHHHH-----HHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            686  6699999999999999999987765211 111110     000012345789999999888877753     269


Q ss_pred             cEEEecCCCCcc---------c--------------------hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD---------E--------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        74 d~vi~~~~~~~~---------~--------------------~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                      |++||++|....         .                    .+.++..++ +..++|++||...+.           +.
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~-----------~~  154 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR-----------AI  154 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-----------CC
Confidence            999999986421         0                    011111122 235788888765431           11


Q ss_pred             CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      .....| .+|...+.+.+       ..|++++.+.||.+-.+..... .............++         ..+..++|
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pee  225 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL---------RRNVTIEE  225 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC---------CCCCCHHH
Confidence            112234 88988887653       4689999999998866521100 001111111111111         12556899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +|+++..++...  ...+.++.+.++.
T Consensus       226 vA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        226 VGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            999999999753  3467788787764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.24  E-value=1.7e-09  Score=82.08  Aligned_cols=179  Identities=17%  Similarity=0.140  Sum_probs=110.7

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi   77 (246)
                      |||+|+||+++++.|.+++  ..|....|+....   ..          ..++.++++|+++.+++.++.++. ++|++|
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666555544321   11          257888999999988877755432 699999


Q ss_pred             ecCCCCccc------------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           78 DINGREADE------------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        78 ~~~~~~~~~------------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++|.....                              ++.++..++  +..+++++||...  ...     . .+..+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~~-----~-~~~~~  144 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SIS-----D-NRLGG  144 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--ccc-----c-CCCCC
Confidence            999874210                              112223333  3457888886321  100     0 01112


Q ss_pred             C-CccccHHHHHHHHHh---------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          126 K-SRHKGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       126 ~-~~~~~k~~~e~~~~~---------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      . .|..+|..++.+++.         .++++..+.|+.+..+....         .....+         ...++..+|+
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~---------~~~~~~~~~~  206 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNVP---------KGKLFTPEYV  206 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhccc---------cCCCCCHHHH
Confidence            2 234789888876631         36888899999887663110         001111         1225678999


Q ss_pred             HHHHHHHhcCCC--CCCeeEEeeCC
Q 025908          196 ARAFVQVLGNEK--ASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~  218 (246)
                      |+.+..++....  ..+..+.+.++
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCCc
Confidence            999999997642  34555555543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.24  E-value=3.5e-10  Score=88.33  Aligned_cols=197  Identities=17%  Similarity=0.127  Sum_probs=117.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc-----ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----   70 (246)
                      |||++.||.++++.|.+.|++|+++.|+....     ...+.. ...+.......+..+.+|++|.+++.+++++     
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQA-VVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHH-HHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999999999988764110     000000 0001111124577889999998888777653     


Q ss_pred             CCccEEEecCCCCcc--------------------c----hHHHHHhCC-C-------CceEEEEeecceeccCCCCCCC
Q 025908           71 KGFDVVYDINGREAD--------------------E----VEPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~--------------------~----~~~l~~a~~-~-------~~~~i~~Ss~~v~~~~~~~~~~  118 (246)
                      .++|++||++|....                    +    ++.++..+. .       ..++|++||...+....     
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----  165 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV-----  165 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC-----
Confidence            268999999986321                    1    112222221 1       24899999866532111     


Q ss_pred             CCCCCCCCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          119 ETDTVDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       119 e~~~~~~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                           ....|..+|..++.+.+       ..|++++.+.|+ +..+.     ............+.       .......
T Consensus       166 -----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~-----~~~~~~~~~~~~~~-------~~~~~~~  227 (286)
T PRK07791        166 -----GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM-----TETVFAEMMAKPEE-------GEFDAMA  227 (286)
T ss_pred             -----CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc-----chhhHHHHHhcCcc-------cccCCCC
Confidence                 11123388988877653       368999999997 43221     11111111111110       1113457


Q ss_pred             HHHHHHHHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          192 VKDLARAFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       192 ~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      .+|++++++.++..  ....|+.+.+.++...
T Consensus       228 pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        228 PENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            89999999999864  3346788888887653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=1.2e-09  Score=83.92  Aligned_cols=193  Identities=10%  Similarity=0.071  Sum_probs=116.4

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+  +-||.++++.|.++|++|++..|+... .+.+...    .... ..++..+.+|++|++++++++++     .+
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVREL----ADTLEGQESLLLPCDVTSDEEITACFETIKEEVGV   87 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHH----HHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence            6887  899999999999999999998875322 1111000    0000 24678899999999888777753     25


Q ss_pred             ccEEEecCCCCc-----cc-----------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREA-----DE-----------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~d~vi~~~~~~~-----~~-----------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +|++||+++...     ..                       .+.++..+....++|++||....-           +..
T Consensus        88 ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~  156 (257)
T PRK08594         88 IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----------VVQ  156 (257)
T ss_pred             ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------CCC
Confidence            899999987531     00                       111222233335899999865421           111


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|...+.+.+       ..|++++.+.|+.+..+.... .-...........  .+       ...+..++|+
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~~v  227 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--AP-------LRRTTTQEEV  227 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CC-------ccccCCHHHH
Confidence            11234 88998887653       358999999999886652100 0000011111110  11       1124568999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      ++++++++...  ...+..+.+.++
T Consensus       228 a~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        228 GDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHcCcccccccceEEEECCc
Confidence            99999998643  345777777765

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.23  E-value=3.1e-10  Score=86.45  Aligned_cols=184  Identities=13%  Similarity=0.101  Sum_probs=112.0

Q ss_pred             HHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEecCCCCc----
Q 025908           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGREA----   84 (246)
Q Consensus        11 l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~~~~~~~----   84 (246)
                      +++.|+++|++|++++|+..+.                ....++.+|++|.+++.+++++.  ++|++||++|...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4688999999999999986551                12346789999999999888742  6999999998632    


Q ss_pred             --------cchHHHHHh----CCCCceEEEEeecceeccCCCCCCCCC----------------CCCCCCCcc-ccHHHH
Q 025908           85 --------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT  135 (246)
Q Consensus        85 --------~~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~----------------~~~~~~~~~-~~k~~~  135 (246)
                              .+...++++    +....++|++||...++.....+..+.                .+..+...| .+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                    122223333    223369999999888753221111110                122223345 899888


Q ss_pred             HHHH--------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 025908          136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  206 (246)
Q Consensus       136 e~~~--------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-  206 (246)
                      +.+.        ...|++++.++||.+.++.... ...............+       ...+...+|+|+++..++... 
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcChhh
Confidence            7543        2358999999999998874211 1100000000000001       112456899999999988643 


Q ss_pred             -CCCCeeEEeeCC
Q 025908          207 -KASRQVFNISGE  218 (246)
Q Consensus       207 -~~~~~~~~~~~~  218 (246)
                       ...++.+.+.++
T Consensus       217 ~~~~G~~i~vdgg  229 (241)
T PRK12428        217 RWINGVNLPVDGG  229 (241)
T ss_pred             cCccCcEEEecCc
Confidence             235666666665

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.23  E-value=4.8e-10  Score=86.26  Aligned_cols=194  Identities=11%  Similarity=0.064  Sum_probs=117.1

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCcc--ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----C
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K   71 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~   71 (246)
                      |||+  +-||.++++.|.++|++|++..|+....  .+.+.     +.......+..+.+|++|++++.+++++     .
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVR-----ELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHH-----HHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            6875  7999999999999999998887654321  11110     0000113466789999999988877754     2


Q ss_pred             CccEEEecCCCCc-----c-------------------c----hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCC
Q 025908           72 GFDVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        72 ~~d~vi~~~~~~~-----~-------------------~----~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                      ++|++||++|...     .                   +    ++.++..++...++|++||.....           +.
T Consensus        87 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~  155 (258)
T PRK07370         87 KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----------AI  155 (258)
T ss_pred             CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----------CC
Confidence            6999999998531     0                   0    122222333336899999865421           11


Q ss_pred             CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      .....| .+|...+.+.+       ..|++++.+.||.+-.+..... -............+         ...+...+|
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~d  226 (258)
T PRK07370        156 PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------LRRTVTQTE  226 (258)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC---------cCcCCCHHH
Confidence            112234 88988887654       3579999999998876521100 00011111111111         113556899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++..++...  ...++.+.+.++.
T Consensus       227 va~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        227 VGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHHhChhhccccCcEEEECCcc
Confidence            999999998643  3356777776653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=1.2e-09  Score=84.04  Aligned_cols=193  Identities=12%  Similarity=0.084  Sum_probs=116.4

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+  +-||.++++.|+++|++|++..|+.... +.+..     .......+..+.+|++|.+++.+++++     .++
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~-----~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEP-----LAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHH-----HHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  4899999999999999999998875321 10100     000012355789999999888777653     268


Q ss_pred             cEEEecCCCCcc-------------c---------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~-------------~---------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....             .               ++.++..++...++|++||.....           +...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----------~~~~  158 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----------VVEN  158 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----------CCcc
Confidence            999999986320             0               122223333335788888754421           1111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..++++..+.|+.+-.+.... ..............++         ..+...+|++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  229 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------RRLVDIDDVG  229 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            1234 78888876653       368999999999886652110 0011111111111111         1245689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++++...  ...|+.+.+.++.
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHHHHHhChhhccccCcEEeeCCcc
Confidence            9999998652  3467777776653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.22  E-value=2.2e-09  Score=82.74  Aligned_cols=194  Identities=14%  Similarity=0.099  Sum_probs=115.7

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||++  -||+++++.|.++|++|++..|+. +..+....     .....+....+.+|++|++++++++++     .++
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEE-----FAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHH-----HHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            68875  899999999999999999888763 21111110     000013456788999999988887753     258


Q ss_pred             cEEEecCCCCcc--------------c-----------hHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------E-----------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~--------------~-----------~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |++||++|....              .           ...+.++    ++...++|++||.+....         . ..
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~---------~-~~  155 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------I-PN  155 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC---------C-CC
Confidence            999999985311              0           0011122    222357888887654210         0 11


Q ss_pred             CCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...|..+|...+.+.+       ..++++..+.|+.+..+.... ..............+.         ..+..++|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  226 (262)
T PRK07984        156 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVG  226 (262)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------cCCCCHHHHH
Confidence            1123388999887764       357999999999886642100 0011111111111111         1245689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++++...  ...+..+.+.++.
T Consensus       227 ~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        227 NSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHcCcccccccCcEEEECCCc
Confidence            9999998652  3467777777764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=2e-09  Score=83.46  Aligned_cols=195  Identities=11%  Similarity=0.086  Sum_probs=116.2

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+  +-||.++++.|.++|++|++..|+... .+.+...    ..+ ......+.+|++|++++++++++     .++
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l----~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPL----AAE-LGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHH----HHh-cCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  789999999999999999888775321 1111000    000 12355689999999888877753     258


Q ss_pred             cEEEecCCCCcc------------------------chHHHH----HhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~----~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +...++    ..+.+..++|++||......         .+ ..
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---------~p-~~  159 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV---------MP-HY  159 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC---------CC-cc
Confidence            999999985310                        011122    22333358889987544210         01 11


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..|..+|...+.+.+       ..+++++.+.||.+..+.... ..... ....... ..++       ..+...+|+|+
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~-~~~~~~~-~~p~-------~r~~~peevA~  230 (272)
T PRK08159        160 NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRY-ILKWNEY-NAPL-------RRTVTIEEVGD  230 (272)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchH-HHHHHHh-CCcc-------cccCCHHHHHH
Confidence            123388988877653       367999999999876542100 00000 0001010 1111       12466899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCee
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++++++...  ...+..+.+.++..
T Consensus       231 ~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        231 SALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHHHHhCccccCccceEEEECCCce
Confidence            999999643  34678888888753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=2.6e-09  Score=82.34  Aligned_cols=194  Identities=10%  Similarity=0.045  Sum_probs=115.1

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||++  -||.++++.|.++|++|++..|+. ...+.+..     ..........+.+|++|+++++++++.     .++
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~-----l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKP-----LAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHH-----HHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            68986  799999999999999999888763 21111100     000012234578999999888877753     259


Q ss_pred             cEEEecCCCCc---------c----c-----------hHHHHH----hCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREA---------D----E-----------VEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~---------~----~-----------~~~l~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+++...         +    .           ...+++    .++...++|++||......          .+..
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------~~~~  157 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV----------IPNY  157 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC----------CCcc
Confidence            99999987521         0    0           111122    2222358999998654210          0111


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..|..+|...+.+.+       ..+++++.+.||.+-.+.... ..............+.         ..+...+|+|+
T Consensus       158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~  228 (260)
T PRK06603        158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------KRNTTQEDVGG  228 (260)
T ss_pred             cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------CCCCCHHHHHH
Confidence            123488988877653       468999999999886652110 0001111111111111         12456899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++++...  ...+..+.+.++.
T Consensus       229 ~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        229 AAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHhCcccccCcceEEEeCCcc
Confidence            999999643  3467777777764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.19  E-value=7.5e-10  Score=93.76  Aligned_cols=191  Identities=15%  Similarity=0.200  Sum_probs=116.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||.++++.|.++|++|+++.|+..+..+...        +....+..+.+|+++++++.+++++     .++|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERAD--------SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998665321111        1124567799999999988887764     36999


Q ss_pred             EEecCCCCc-------c---------------c----hHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREA-------D---------------E----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~-------~---------------~----~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +||++|...       +               +    .+.++..+.  +. .++|++||........          ...
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------~~~  152 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----------KRT  152 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------CCc
Confidence            999998621       0               0    112223332  22 3899999876532111          112


Q ss_pred             CccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH--HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .|..+|...+.+.+       ..+++++.+.|+.+..+.......  ..........  ++       ...+...+|+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~  223 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR--IP-------LGRLGRPEEIAE  223 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc--CC-------CCCCcCHHHHHH
Confidence            24488988887653       357999999999876653110000  0000000000  10       112456899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCC
Q 025908          198 AFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                      +++.++...  ...+.++.+.++
T Consensus       224 ~v~~l~~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        224 AVFFLASDQASYITGSTLVVDGG  246 (520)
T ss_pred             HHHHHhCccccCccCceEEecCC
Confidence            999988642  224445544443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=2.4e-09  Score=83.09  Aligned_cols=194  Identities=11%  Similarity=0.073  Sum_probs=116.1

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+  +-||+++++.|.++|++|++..|+... .+.+..    ...+.... ..+.+|++|.+++.++++.     .++
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~----~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEP----IAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHH----HHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6886  789999999999999999998887421 111100    00011122 5688999999888777753     268


Q ss_pred             cEEEecCCCCcc------------------------c----hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +    ++.++..+....++|++||......         .+ ..
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~---------~~-~~  154 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY---------VP-HY  154 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC---------CC-cc
Confidence            999999985310                        0    1223333333358999998653210         01 11


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ..|..+|...+.+.+       ..|+++..+.||.+..+..... -..... .... ...+       ...+...+|+++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~-~~~~-~~~p-------l~r~~~pedva~  225 (274)
T PRK08415        155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMIL-KWNE-INAP-------LKKNVSIEEVGN  225 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHh-hhhh-hhCc-------hhccCCHHHHHH
Confidence            123388988877653       3689999999998876521100 000000 0000 0011       112456899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...++.+.+.++.
T Consensus       226 ~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        226 SGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHhhhhhhcccccEEEEcCcc
Confidence            999998642  3467778887764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=3e-09  Score=81.74  Aligned_cols=192  Identities=15%  Similarity=0.139  Sum_probs=115.1

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCCc-cccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||  ++-||.++++.|.++|++|+++.|+... ..+.+.       ......+..+.+|++|++++++++++     .+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            688  8999999999999999999998876421 111110       01123567899999999888877653     36


Q ss_pred             ccEEEecCCCCcc-------------c---------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~d~vi~~~~~~~~-------------~---------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +|++||++|....             .               ++.++..++...+++++|+....          ..+  
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~----------~~~--  153 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV----------AWP--  153 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc----------cCC--
Confidence            9999999986421             0               11122223323478877743210          011  


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|...+.+.+       ..|++++.+.||.+..+..... ........+....+.        .+.+...+|+
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~p~ev  225 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL--------GWDVKDPTPV  225 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc--------ccccCCHHHH
Confidence            11224 88888876653       3689999999998876521100 000111111111111        0124578999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      |++++.++...  ...++++.+.++.
T Consensus       226 A~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        226 ARAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHHHHHHhCcccccccceEEEEcCce
Confidence            99999998753  3467777777653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=1.7e-09  Score=83.30  Aligned_cols=194  Identities=12%  Similarity=0.110  Sum_probs=115.2

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||  ++-||.++++.|+++|++|++..|.... .+.+..     ..........+.+|++|+++++++++.     .++
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITE-----FAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHH-----HHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            675  5789999999999999999987654211 111100     000012234688999999988887753     369


Q ss_pred             cEEEecCCCCcc--------------c---------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~--------------~---------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |++||++|....              .               ++.++..+.+..++|++||....-.         .+ .
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~---------~~-~  155 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV---------VP-N  155 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC---------CC-C
Confidence            999999986310              0               1112222333368999998654210         01 1


Q ss_pred             CCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...|..+|...+.+.+       ..+++++.+.|+.+-.+..... ........+....+.         ..+..++|++
T Consensus       156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  226 (260)
T PRK06997        156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL---------RRNVTIEEVG  226 (260)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc---------cccCCHHHHH
Confidence            1123388988877653       3579999999998866421100 001111111111111         1245689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++..++...  ...++++.+.++.
T Consensus       227 ~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        227 NVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHhCccccCcceeEEEEcCCh
Confidence            9999998653  3467788777764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=1.5e-09  Score=90.29  Aligned_cols=191  Identities=18%  Similarity=0.165  Sum_probs=114.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||.++++.|.++|++|+++.|.....  .+..     .. ...+...+.+|+++.+++.++++..     ++|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~--~l~~-----~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGE--ALAA-----VA-NRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH--HHHH-----HH-HHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999998853221  0000     00 0124467889999998887777532     5899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+++....                    +..++.+++.      ...+||++||...+....          ....|.
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~----------~~~~Y~  357 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR----------GQTNYA  357 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------CChHHH
Confidence            9999986321                    1222333321      336899999876532111          112244


Q ss_pred             ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.++       +..++.++.+.|+.+-.+....  .........+ . +....      ..-..+|+++++.++
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~~~~-~-~~~l~------~~~~p~dva~~~~~l  427 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA--IPFATREAGR-R-MNSLQ------QGGLPVDVAETIAWL  427 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc--cchhHHHHHh-h-cCCcC------CCCCHHHHHHHHHHH
Confidence            7888666554       2468999999999865432100  0001111111 1 10001      122368999999998


Q ss_pred             hcCC--CCCCeeEEeeCCe
Q 025908          203 LGNE--KASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~  219 (246)
                      +...  ...++++.++++.
T Consensus       428 ~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        428 ASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             hChhhcCCCCCEEEECCCc
Confidence            8642  3357787777653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1.1e-09  Score=83.46  Aligned_cols=70  Identities=19%  Similarity=0.190  Sum_probs=55.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|.||+++++.|+++|++|+++.|+.........          ......+.+|+++.+++.+.+.  ++|++||++
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999997622111100          1123567899999999988886  899999999


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      |.
T Consensus        88 G~   89 (245)
T PRK12367         88 GI   89 (245)
T ss_pred             cc
Confidence            86

>PRK05599 hypothetical protein; Provisional

Probab=99.11  E-value=2e-09  Score=82.30  Aligned_cols=179  Identities=19%  Similarity=0.225  Sum_probs=111.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++.||.++++.|. +|++|+++.|+.++..+...     +..+. ...+.++.+|+.|.+++++++++     .++|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLAS-----DLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH-----HHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999998 59999999998665321110     01111 12478899999999888777653     2689


Q ss_pred             EEEecCCCCccc------------------------hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~~------------------------~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      ++||++|.....                        .+.++..+.  + ..++|++||...+-..          .....
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~~~~~  149 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR----------RANYV  149 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC----------cCCcc
Confidence            999999863110                        011222232  2 3589999986553110          11112


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      |..+|...+.+.+       ..+++++.+.||.+..+..         .   ...+.+         .....+|+|+.++
T Consensus       150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---------~---~~~~~~---------~~~~pe~~a~~~~  208 (246)
T PRK05599        150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---------T---GMKPAP---------MSVYPRDVAAAVV  208 (246)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh---------c---CCCCCC---------CCCCHHHHHHHHH
Confidence            3388888776553       3578999999998766410         0   000000         0246899999999


Q ss_pred             HHhcCCCCCCeeEEeeC
Q 025908          201 QVLGNEKASRQVFNISG  217 (246)
Q Consensus       201 ~~~~~~~~~~~~~~~~~  217 (246)
                      .++..+.. ...+.+.+
T Consensus       209 ~~~~~~~~-~~~~~~~~  224 (246)
T PRK05599        209 SAITSSKR-STTLWIPG  224 (246)
T ss_pred             HHHhcCCC-CceEEeCc
Confidence            99987543 33444444

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.11  E-value=1.2e-09  Score=88.47  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=58.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|+||+++++.|.++|++|++++|+..+.......        ...++..+.+|++|.+++.+.+.  ++|++||++
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~--------~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING--------EDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------cCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            79999999999999999999999999876542211110        01346778899999999998887  899999998


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      |..
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.11  E-value=1.8e-09  Score=82.98  Aligned_cols=184  Identities=15%  Similarity=0.092  Sum_probs=108.3

Q ss_pred             CCccccchHHHHHHHHH----CCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhcC---
Q 025908            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~---   71 (246)
                      |||+|.||.++++.|.+    .|++|+++.|+.........     +...  ....+.++.+|+++.+++.+++++.   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKA-----EIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHH-----HHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    79999999998655221110     0000  1236788999999998887766421   


Q ss_pred             ------CccEEEecCCCCcc---------c------------------hHHHHHhCC-C---CceEEEEeecceeccCCC
Q 025908           72 ------GFDVVYDINGREAD---------E------------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL  114 (246)
Q Consensus        72 ------~~d~vi~~~~~~~~---------~------------------~~~l~~a~~-~---~~~~i~~Ss~~v~~~~~~  114 (246)
                            +.|++||++|....         .                  ++.++..+. .   ..++|++||...+.+   
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---  157 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---  157 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence                  13689999885210         0                  122333333 1   257999998765321   


Q ss_pred             CCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCce
Q 025908          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (246)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                              ......| .+|...+.+.+       ..++.++.+.||.+-.+.     ...+...................
T Consensus       158 --------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       158 --------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM-----QQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH-----HHHHHHhcCChhHHHHHHHHHhc
Confidence                    1112234 88998887663       257899999999876542     11110000000000000000001


Q ss_pred             eeeeeHHHHHHHHHHHhcC
Q 025908          187 TQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~  205 (246)
                      ..+..++|+|+.++.++.+
T Consensus       225 ~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhc
Confidence            1256789999999999853

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.09  E-value=8.7e-10  Score=83.92  Aligned_cols=125  Identities=21%  Similarity=0.129  Sum_probs=85.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcC-ceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      ||||+.||.+++.+|.++|.+++.+.|...+......+ .   ...... ++.++++|++|.+++.++++.     .++|
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~-l---~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD   93 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEE-L---RKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVD   93 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHH-H---HHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999999888888876663211000 0   000112 599999999999988877632     3799


Q ss_pred             EEEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                        .++.++..++  +.-++|.+||..-+-.         .|.. ..|
T Consensus        94 vLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~---------~P~~-~~Y  163 (282)
T KOG1205|consen   94 VLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP---------LPFR-SIY  163 (282)
T ss_pred             EEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC---------CCcc-ccc
Confidence            99999997432                        1334444455  3479999998765311         1111 134


Q ss_pred             cccHHHHHHHH
Q 025908          129 HKGKLNTESVL  139 (246)
Q Consensus       129 ~~~k~~~e~~~  139 (246)
                      ..+|.+++.+.
T Consensus       164 ~ASK~Al~~f~  174 (282)
T KOG1205|consen  164 SASKHALEGFF  174 (282)
T ss_pred             chHHHHHHHHH
Confidence            48999998876

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.07  E-value=2.8e-09  Score=77.02  Aligned_cols=142  Identities=18%  Similarity=0.175  Sum_probs=91.7

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      +||+|.+|.++++.|.++|. .|+.+.|+......... . .........++.++.+|+++.+.+.+++++     ..+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE-L-LAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH-H-HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999986 68888886544211000 0 001111134677899999998888777653     2479


Q ss_pred             EEEecCCCCc--------------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccH
Q 025908           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (246)
Q Consensus        75 ~vi~~~~~~~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (246)
                      .+||+++...                    .+...+++++.  +.++++++||....-..          .....|..+|
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~----------~~~~~y~~sk  153 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN----------PGQANYAAAN  153 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC----------CCchhhHHHH
Confidence            9999998521                    12344556554  56789999886542111          0111233778


Q ss_pred             HHHHHHHH---hcCCceEEeeccee
Q 025908          133 LNTESVLE---SKGVNWTSLRPVYI  154 (246)
Q Consensus       133 ~~~e~~~~---~~~~~~~ilR~~~i  154 (246)
                      ...+.+++   ..+++.+.+.|+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      154 AFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHhcCCceEEEeeccc
Confidence            88887763   46788888888754

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.07  E-value=1.5e-09  Score=85.92  Aligned_cols=191  Identities=14%  Similarity=0.126  Sum_probs=112.0

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++.||.++++.|+++| ++|++++|+..+..+...     +.......+.++.+|+++.+++.+++++     .++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAK-----SLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 999999998654211110     0000124677889999999888777653     2699


Q ss_pred             EEEecCCCCcc---------------------c----hHHHHHhCC-C---CceEEEEeecceeccCCC----CC-----
Q 025908           75 VVYDINGREAD---------------------E----VEPILDALP-N---LEQFIYCSSAGVYLKSDL----LP-----  116 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~----~~~l~~a~~-~---~~~~i~~Ss~~v~~~~~~----~~-----  116 (246)
                      ++||++|....                     +    ++.++..+. .   ..++|++||...+.....    .+     
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            99999985210                     0    222333333 1   369999999876532100    00     


Q ss_pred             -------------CCCCCCCCCCCcc-ccHHHHHHHH----Hh----cCCceEEeecceeeC-CCCCC--chHHHHHHHH
Q 025908          117 -------------HCETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNYN--PVEEWFFHRL  171 (246)
Q Consensus       117 -------------~~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~ilR~~~i~g-~~~~~--~~~~~~~~~~  171 (246)
                                   ..+..+..+...| .+|.....+.    ++    .++.++.++||.+.. +....  .....++...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                         0011122233335 8898855433    11    478999999998853 22111  1111111111


Q ss_pred             HhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      ....     .     ..+.+.++.++.++.++..+
T Consensus       244 ~~~~-----~-----~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       244 QKYI-----T-----KGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HHHH-----h-----ccccchhhhhhhhHHhhcCc
Confidence            1000     0     12456889999999887653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.01  E-value=2.1e-08  Score=78.98  Aligned_cols=191  Identities=12%  Similarity=0.045  Sum_probs=108.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCC--CCCc---hhhhhhcCceEEEEccCCCHHHHHHhhhc-----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~~~---~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----   70 (246)
                      |||++.||.++++.|++.|++|+++.|+.........  +...   .........+..+.+|+++++++++++++     
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   93 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ   93 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999997543110000  0000   11111123577899999999888877754     


Q ss_pred             CCccEEEecC-CCC------cc------------------c----hHHHHHhCC--CCceEEEEeecce-eccCCCCCCC
Q 025908           71 KGFDVVYDIN-GRE------AD------------------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHC  118 (246)
Q Consensus        71 ~~~d~vi~~~-~~~------~~------------------~----~~~l~~a~~--~~~~~i~~Ss~~v-~~~~~~~~~~  118 (246)
                      .++|++||++ +..      ..                  +    ++.++..+.  +..++|++||... +...      
T Consensus        94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~------  167 (305)
T PRK08303         94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT------  167 (305)
T ss_pred             CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc------
Confidence            2689999998 631      00                  0    112223332  2358999988543 1110      


Q ss_pred             CCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                         +......| .+|.....+.+       ..|++++.+.||.+-.+.     ...... .................-+.
T Consensus       168 ---~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~-----~~~~~~-~~~~~~~~~~~~~p~~~~~~  238 (305)
T PRK08303        168 ---HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM-----MLDAFG-VTEENWRDALAKEPHFAISE  238 (305)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH-----HHHhhc-cCccchhhhhccccccccCC
Confidence               11112234 88888877653       357999999999875541     000000 00000000000000001133


Q ss_pred             eHHHHHHHHHHHhcCC
Q 025908          191 HVKDLARAFVQVLGNE  206 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~  206 (246)
                      ..+|+|++++.++..+
T Consensus       239 ~peevA~~v~fL~s~~  254 (305)
T PRK08303        239 TPRYVGRAVAALAADP  254 (305)
T ss_pred             CHHHHHHHHHHHHcCc
Confidence            5899999999999754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.00  E-value=1.6e-09  Score=85.81  Aligned_cols=171  Identities=15%  Similarity=0.160  Sum_probs=105.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-h-cCceEEEEccCCC--HHHHHH---hhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKD--YDFVKS---SLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~--~~~~~~---~~~~~~~   73 (246)
                      |||||.||+++++.|.++|++|++++|+.++..+...     +... + ...+..+.+|+++  .+.+.+   .+...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSD-----SIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----HHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            7999999999999999999999999998765321110     0111 1 1356778889974  333333   3332356


Q ss_pred             cEEEecCCCCcc----------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~----------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                      +.    +.++..+.  +..++|++||...+....       . +..
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-------~-p~~  205 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-------D-PLY  205 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-------C-ccc
Confidence            799999986321                      11    12222232  456899999976631100       0 111


Q ss_pred             CCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          126 KSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       126 ~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..|..+|...+.+.+       ..|++++.+.||.+-.+...          . ...          .....+.+++|+.
T Consensus       206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~----------~~~~~~p~~~A~~  264 (320)
T PLN02780        206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRS----------SFLVPSSDGYARA  264 (320)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCC----------CCCCCCHHHHHHH
Confidence            223388988887653       35899999999988665210          0 000          0113468999999


Q ss_pred             HHHHhcC
Q 025908          199 FVQVLGN  205 (246)
Q Consensus       199 ~~~~~~~  205 (246)
                      ++..+..
T Consensus       265 ~~~~~~~  271 (320)
T PLN02780        265 ALRWVGY  271 (320)
T ss_pred             HHHHhCC
Confidence            9999864

>PLN00015 protochlorophyllide reductase

Probab=99.00  E-value=3.2e-09  Score=83.88  Aligned_cols=200  Identities=15%  Similarity=0.139  Sum_probs=114.3

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++.||.++++.|.++| ++|++.+|+..+.......     .......+.++.+|+.|.+++.++++.     .++|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~-----l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKS-----AGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----hcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 9999999876542211100     000124677889999999888777653     2589


Q ss_pred             EEEecCCCCcc---------------------c----hHHHHHhCC--C--CceEEEEeecceeccCC---CCC---CC-
Q 025908           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD---LLP---HC-  118 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~---~~~---~~-  118 (246)
                      ++||++|....                     +    ++.++..+.  +  ..++|++||...+-...   ..+   +. 
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999986311                     0    222334433  2  46999999976531100   000   00 


Q ss_pred             ----------C-------CCCCCCCCcc-ccHHHHHHHH----Hh----cCCceEEeecceeeC-CCCCC--chHHHHHH
Q 025908          119 ----------E-------TDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNYN--PVEEWFFH  169 (246)
Q Consensus       119 ----------e-------~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~ilR~~~i~g-~~~~~--~~~~~~~~  169 (246)
                                +       ..+..+...| .+|...+.+.    ++    .++.++.+.||.+.. +....  ......+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~  237 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP  237 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH
Confidence                      0       0011222235 8888755432    22    479999999999854 32111  01100000


Q ss_pred             HHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEe
Q 025908          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNI  215 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~  215 (246)
                      .. ..  ..  .     ..+.++++.|+.++.++...  ...|..|..
T Consensus       238 ~~-~~--~~--~-----~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~  275 (308)
T PLN00015        238 PF-QK--YI--T-----KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSW  275 (308)
T ss_pred             HH-HH--HH--h-----cccccHHHhhhhhhhhccccccCCCcccccc
Confidence            00 00  00  0     12456899999999887543  234444443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.95  E-value=3.9e-08  Score=75.67  Aligned_cols=202  Identities=17%  Similarity=0.167  Sum_probs=122.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh----c--CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~----~--~~~d   74 (246)
                      ||++.-||+++++.|.+.|.+|++..|+.+..........  ........+..+.+|+++.+...++++    +  .++|
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELG--GLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999999999876321111000  000002468899999998766555443    2  2699


Q ss_pred             EEEecCCCCccc----------------------hHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREADE----------------------VEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        75 ~vi~~~~~~~~~----------------------~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      ++++++|.....                      ...+..++    .  +...++++||...+..         ....+ 
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~---------~~~~~-  161 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP---------GPGSG-  161 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---------CCCCc-
Confidence            999999874321                      11222222    1  3456888887654311         11112 


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH----HHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      .+| .+|..++++.+       ..|+++..+-|+.+..+.......    ..+..........+. +      .+-..+|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~-g------r~g~~~e  234 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL-G------RVGTPEE  234 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc-C------CccCHHH
Confidence            345 89999998764       468999999999988875111111    111111001111111 1      2344899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +++.+..++...  ...|+.+.+.++..+
T Consensus       235 va~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  235 VAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            999999888653  345677777776543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.89  E-value=5.6e-08  Score=73.75  Aligned_cols=173  Identities=14%  Similarity=0.167  Sum_probs=112.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.+|+.++.++.++|..+.+.+.+.....+.....     .. ...+..+.||+++.+++.+..++     ..+|+
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~-----~~-~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEI-----RK-IGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHH-----Hh-cCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            799999999999999999998888888876643222110     00 13588999999999888766643     26999


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                        -+++++..+.  +..++|-++|...+-          .+..-.+|.
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----------g~~gl~~Yc  187 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF----------GPAGLADYC  187 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc----------CCccchhhh
Confidence            9999997321                        1334444433  566899998865431          122223344


Q ss_pred             ccHHHHHHHH-------H---hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 KGKLNTESVL-------E---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 ~~k~~~e~~~-------~---~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .+|..+.-+.       +   ..+++.+.+.|+.+-..         ++    .+ .    ..-....+.+..+.+|+.+
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg---------mf----~~-~----~~~~~l~P~L~p~~va~~I  249 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG---------MF----DG-A----TPFPTLAPLLEPEYVAKRI  249 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc---------cc----CC-C----CCCccccCCCCHHHHHHHH
Confidence            7777764322       2   24688888888764321         11    11 1    1112346678899999999


Q ss_pred             HHHhcCCC
Q 025908          200 VQVLGNEK  207 (246)
Q Consensus       200 ~~~~~~~~  207 (246)
                      +..+...+
T Consensus       250 v~ai~~n~  257 (300)
T KOG1201|consen  250 VEAILTNQ  257 (300)
T ss_pred             HHHHHcCC
Confidence            99887643

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.89  E-value=1.3e-08  Score=76.72  Aligned_cols=139  Identities=8%  Similarity=0.083  Sum_probs=92.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----C-Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~-~~d   74 (246)
                      |||++-||.++++.|.++|++|+++.|+.++..+...     +..+....+..+.+|+.+++++.+++++     . ++|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYE-----QCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999999999998765321111     0111124567788999999888777643     2 699


Q ss_pred             EEEecCCCCc-c---------c---------------hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREA-D---------E---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        75 ~vi~~~~~~~-~---------~---------------~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      ++||++|... .         .               .+.++..+.  + ..++|++||...+            + ...
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~-~~~  152 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------Q-DLT  152 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------C-Ccc
Confidence            9999997311 0         0               111122222  2 3589999975431            1 111


Q ss_pred             CccccHHHHHHHHH-------hcCCceEEeecceeeCC
Q 025908          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~  157 (246)
                      .|..+|...+.+.+       ..++++..+.||.+-.+
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            23478888877653       36899999999987665

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.87  E-value=2.8e-08  Score=77.79  Aligned_cols=191  Identities=18%  Similarity=0.070  Sum_probs=113.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      ||||+.||.+++++|..+|.+|+..+|+..+..+...+...   ......+.+.++|+++.+++.++.+.     ...|+
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldv  117 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDV  117 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccE
Confidence            79999999999999999999999999998553222111100   11136788899999998887766543     36899


Q ss_pred             EEecCCCCcc-------c---------------hHHHHHhCC--CCceEEEEeecceecc--CCCCCCCCCCC-CCCCCc
Q 025908           76 VYDINGREAD-------E---------------VEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDT-VDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~-------~---------------~~~l~~a~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~-~~~~~~  128 (246)
                      +|++||....       +               +..++..++  ...|+|++||..- +.  .-+....+... ......
T Consensus       118 LInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~  196 (314)
T KOG1208|consen  118 LINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAA  196 (314)
T ss_pred             EEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccchhH
Confidence            9999987321       1               334555555  2279999998664 11  11111111111 111111


Q ss_pred             c-ccHHHHHHHH----Hh--cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          129 H-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       129 ~-~~k~~~e~~~----~~--~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      | .+|.......    ++  .|+....+-||.+.++....  ...+...+...-.-.+.         -+.+.-|+.++.
T Consensus       197 Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~---------ks~~~ga~t~~~  265 (314)
T KOG1208|consen  197 YALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLT---------KSPEQGAATTCY  265 (314)
T ss_pred             HHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec--chHHHHHHHHHHHHHhc---------cCHHHHhhheeh
Confidence            4 7777764433    22  27999999999988874322  11111111111100111         136777888887


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++.++
T Consensus       266 ~a~~p  270 (314)
T KOG1208|consen  266 AALSP  270 (314)
T ss_pred             hccCc
Confidence            77665

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.83  E-value=1.4e-07  Score=68.55  Aligned_cols=192  Identities=15%  Similarity=0.173  Sum_probs=117.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc--cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      ||+.|-||.++.++|+++|..+.++.-+.+...  ..+....      ....+.++++|+++..++++++++     ..+
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~------p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAIN------PSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccC------CCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            689999999999999999988777766655532  1121111      146799999999998888888765     269


Q ss_pred             cEEEecCCCCcc----------------chHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccH
Q 025908           74 DVVYDINGREAD----------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (246)
Q Consensus        74 d~vi~~~~~~~~----------------~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k  132 (246)
                      |++||.||...+                ++...+.++.     .-.-+|.+||..-+.+.         |..|. |..+|
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~---------p~~pV-Y~AsK  154 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM---------PVFPV-YAASK  154 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc---------ccchh-hhhcc
Confidence            999999997432                3444555554     22368888875543221         11111 11333


Q ss_pred             HH---------HHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHh-CCCcccCCCC----CceeeeeeHHHHHHH
Q 025908          133 LN---------TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSG----IQVTQLGHVKDLARA  198 (246)
Q Consensus       133 ~~---------~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~i~~~D~a~~  198 (246)
                      .-         -+.+.+++|+++..+.|+..-.         .++..+.. +.-+.. .+.    -.....-+..++++.
T Consensus       155 aGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~-~~~~~~~l~~~~~q~~~~~a~~  224 (261)
T KOG4169|consen  155 AGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEY-SDSIKEALERAPKQSPACCAIN  224 (261)
T ss_pred             cceeeeehhhhhhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccc-cHHHHHHHHHcccCCHHHHHHH
Confidence            22         2445678899999999986422         12222211 110000 000    001112246889999


Q ss_pred             HHHHhcCCCCCCeeEEeeCCe
Q 025908          199 FVQVLGNEKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~  219 (246)
                      ++.+++.+. ++.+|.+..+.
T Consensus       225 ~v~aiE~~~-NGaiw~v~~g~  244 (261)
T KOG4169|consen  225 IVNAIEYPK-NGAIWKVDSGS  244 (261)
T ss_pred             HHHHHhhcc-CCcEEEEecCc
Confidence            999998854 67899888874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.81  E-value=4.7e-07  Score=70.99  Aligned_cols=200  Identities=8%  Similarity=-0.067  Sum_probs=110.2

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc---hhhhh-----hcCceEEEEccC--CCH-------
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAE-----FSSKILHLKGDR--KDY-------   61 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~~~~-----~~~~v~~~~~D~--~~~-------   61 (246)
                      |||  +.-||.++++.|.++|.+|++ .|+..+..........   .+...     .......+.+|+  .++       
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            789  799999999999999999988 6654432110000000   00000     011245677888  322       


Q ss_pred             -----------HHHHHhhhc-----CCccEEEecCCCCc---c-------------------c----hHHHHHhCCCCce
Q 025908           62 -----------DFVKSSLSA-----KGFDVVYDINGREA---D-------------------E----VEPILDALPNLEQ   99 (246)
Q Consensus        62 -----------~~~~~~~~~-----~~~d~vi~~~~~~~---~-------------------~----~~~l~~a~~~~~~   99 (246)
                                 +++.+++++     .++|++||++|...   .                   +    ++.++..+....+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                       255555542     25899999996421   0                   0    2223333332268


Q ss_pred             EEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH-------h-cCCceEEeecceeeCCCCCCc-hHHHHHHH
Q 025908          100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNP-VEEWFFHR  170 (246)
Q Consensus       100 ~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~  170 (246)
                      +|++||......         .+.....|..+|...+.+.+       . .+++++.+-||.+-.+..... ........
T Consensus       174 II~isS~a~~~~---------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~  244 (303)
T PLN02730        174 SISLTYIASERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEY  244 (303)
T ss_pred             EEEEechhhcCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHH
Confidence            999998654210         01000123488998887653       2 479999999998876531110 00111111


Q ss_pred             HHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .....++         ..+...+|++.++++++...  ...++.+.+.++.
T Consensus       245 ~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        245 SYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            1111111         12346899999999999643  3457777776663

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.80  E-value=3.4e-08  Score=71.72  Aligned_cols=140  Identities=23%  Similarity=0.235  Sum_probs=85.0

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|-+|..+++.|.+++ .+|+++.|+.....+..  ..-.++......+.++.+|++|++++.+++++.     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999997 58999999842211100  001122223467899999999999999998642     578


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhCC--CCceEEEEeeccee-ccCCCCCCCCCCCCCCCCcccc
Q 025908           75 VVYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      .|||+++...+                    +..++.+++.  ..+.||.+||.... |.. +          ...|..+
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~-g----------q~~YaaA  152 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP-G----------QSAYAAA  152 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-T----------BHHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-c----------hHhHHHH
Confidence            99999987422                    3556777765  78899999997753 321 1          1123244


Q ss_pred             HHHHHHHH---HhcCCceEEeecce
Q 025908          132 KLNTESVL---ESKGVNWTSLRPVY  153 (246)
Q Consensus       132 k~~~e~~~---~~~~~~~~ilR~~~  153 (246)
                      -...+.+.   +..+.+++.+..+.
T Consensus       153 N~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  153 NAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccc
Confidence            44444443   45678888777654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.72  E-value=8.4e-08  Score=68.63  Aligned_cols=137  Identities=19%  Similarity=0.228  Sum_probs=92.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh---hcC--CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAK--GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~~--~~d~   75 (246)
                      |||++.||.++++.|++.|.+|++..|+..+..+....         .+.+....||+.|.+...++.   .+.  +.++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            79999999999999999999999999998775443332         478888999999876444333   222  5899


Q ss_pred             EEecCCCCcc----c----------------------hHHHHHhC-C-CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----E----------------------VEPILDAL-P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----~----------------------~~~l~~a~-~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|++||....    +                      +..++..+ + ....+|.+||.=.|-+..           ...
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~-----------~~P  150 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA-----------STP  150 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc-----------ccc
Confidence            9999997422    0                      11122222 2 356789999866542221           112


Q ss_pred             cc-ccHHHHHHH-------HHhcCCceEEeecceeeCC
Q 025908          128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       128 ~~-~~k~~~e~~-------~~~~~~~~~ilR~~~i~g~  157 (246)
                      -| .+|+....+       ++..++++.-+-|+.|-.+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            23 667666543       2445788888888887664

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.69  E-value=5.5e-08  Score=69.67  Aligned_cols=124  Identities=20%  Similarity=0.180  Sum_probs=82.5

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecC--CCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+|-||+++++.|+++| +.|+++.|+  .....+.     ..+......++.++++|+++.++++++++.     ..
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence            6999999999999999995 578888887  1211111     011122247889999999999888877754     37


Q ss_pred             ccEEEecCCCCccc--------------------hHHHHHhC--CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        73 ~d~vi~~~~~~~~~--------------------~~~l~~a~--~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +|++||++|.....                    ...+.+++  ++..++|++||....-           +......| 
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~Y~  149 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR-----------GSPGMSAYS  149 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS-----------SSTTBHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc-----------CCCCChhHH
Confidence            99999999875421                    11122222  2567899999877631           11122235 


Q ss_pred             ccHHHHHHHHH
Q 025908          130 KGKLNTESVLE  140 (246)
Q Consensus       130 ~~k~~~e~~~~  140 (246)
                      .+|...+.+.+
T Consensus       150 askaal~~~~~  160 (167)
T PF00106_consen  150 ASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88988887765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.68  E-value=1.3e-07  Score=68.06  Aligned_cols=134  Identities=16%  Similarity=0.078  Sum_probs=92.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCccE
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFDV   75 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d~   75 (246)
                      +++|.||.+|+++|.+.|+.|++..|+-++- ..+..         ..++...+.|+++++++.+...+      ...|+
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M-~~L~~---------~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPM-AQLAI---------QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchH-hhHHH---------hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            5789999999999999999999999987762 22221         36799999999999888776643      25799


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----C-CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EVEPILDA----L-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~-~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +++.||..-.                    +..++.++    + +....+|++.|...+-+           ....+.| 
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp-----------fpf~~iYs  153 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP-----------FPFGSIYS  153 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec-----------cchhhhhh
Confidence            9999886311                    12222222    1 13457888888776521           1122345 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeC
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYG  156 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g  156 (246)
                      .+|+++..+.+       ..|++++.+-+|.+-.
T Consensus       154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             HHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            78888877643       3577888887777654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.66  E-value=9.5e-07  Score=67.50  Aligned_cols=186  Identities=19%  Similarity=0.163  Sum_probs=113.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      ||++.-+|..++..+..+|++|+++.|+..+..+.....   ........+.+..+|+.|.+.+...+++-     .+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l---~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAEL---ELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhh---hhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            699999999999999999999999999988854332211   01111234779999999998888888754     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCC---CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPN---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|+|||..+.                    ++.+++.+    ++.   .-+++.+||...--+     +.-.....|. .
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~-----i~GysaYs~s-K  189 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG-----IYGYSAYSPS-K  189 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC-----cccccccccH-H
Confidence            9999997432                    33344433    332   228888887544100     0000111111 1


Q ss_pred             cccHHHHHHH---HHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc-ccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          129 HKGKLNTESV---LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       129 ~~~k~~~e~~---~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +..|..++.+   +..+++.++..-|+.+..|+....         ...+|. ...-  +...+.+..+++|.+++.=+.
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---------n~tkP~~t~ii--~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---------NKTKPEETKII--EGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---------cccCchheeee--cCCCCCcCHHHHHHHHHhHHh
Confidence            2334444433   234688888888888888752111         011111 1111  112345778999999988776


Q ss_pred             CC
Q 025908          205 NE  206 (246)
Q Consensus       205 ~~  206 (246)
                      +.
T Consensus       259 rg  260 (331)
T KOG1210|consen  259 RG  260 (331)
T ss_pred             hc
Confidence            54

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.62  E-value=3.8e-07  Score=63.57  Aligned_cols=189  Identities=15%  Similarity=0.212  Sum_probs=116.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      ||+.-.||+.+++.|.+.|.+|+++.|++....+...+.        ..-++.+.+|+.+-+.+.+++... .+|.+++.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------PSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------CcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            577778999999999999999999999987754433321        233889999999988888888644 37888998


Q ss_pred             CCCCccc----------------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           80 NGREADE----------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        80 ~~~~~~~----------------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +|....+                            .+++++.. ....++.+||...-           -+....+-| .
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIVNvSSqas~-----------R~~~nHtvYca  152 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIVNVSSQASI-----------RPLDNHTVYCA  152 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEEEecchhcc-----------cccCCceEEee
Confidence            8863211                            11122211 12248888875541           122223345 7


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHH-HHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      +|.+.+..-+       ..+|++..+.|+.++......+|.. .-...+....++         .-|--++.+.+++..+
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl---------~rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL---------KRFAEVDEVVNAVLFL  223 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch---------hhhhHHHHHHhhheee
Confidence            7887766432       2468899999998887543332211 001111111111         2345578899999988


Q ss_pred             hcCCC--CCCeeEEeeCC
Q 025908          203 LGNEK--ASRQVFNISGE  218 (246)
Q Consensus       203 ~~~~~--~~~~~~~~~~~  218 (246)
                      +.+..  ..|...-+.+|
T Consensus       224 LSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  224 LSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eecCcCcccCceeeecCC
Confidence            86542  24555555554

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.57  E-value=8.1e-08  Score=69.17  Aligned_cols=98  Identities=16%  Similarity=0.200  Sum_probs=69.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||||++|. +++.|.++|++|++++|++.........     .. ....+..+.+|+.|.+++.+++++     ..+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~-----l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRE-----ST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHH-----hh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998875 9999999999999999976542211100     00 024678889999999888877753     25778


Q ss_pred             EEecCCCCccchHHHHHhCC--CCc----eEEEEeecc
Q 025908           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAG  107 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~--~~~----~~i~~Ss~~  107 (246)
                      +|+....  ....++..+|+  +++    +|+++=...
T Consensus        79 lv~~vh~--~~~~~~~~~~~~~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         79 AVAWIHS--SAKDALSVVCRELDGSSETYRLFHVLGSA  114 (177)
T ss_pred             EEEeccc--cchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence            8766543  46778888887  777    788775433

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.53  E-value=2.1e-06  Score=65.69  Aligned_cols=136  Identities=20%  Similarity=0.173  Sum_probs=94.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh-------cCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~-------~~~~   73 (246)
                      ||..+-.|+.+++.|.++|++|.+-+-.+.. .+.+....      ..++...++.|+++++++.++.+       +.+.
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g-ae~L~~~~------~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG-AESLRGET------KSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCch-HHHHhhhh------cCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            6888889999999999999999999955544 23332211      03678888999999988877663       2467


Q ss_pred             cEEEecCCCCc---------------------cc----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREA---------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~---------------------~~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      =.|||+||...                     -+    ++.++-..+ ...|+|++||..-           ..+.....
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G-----------R~~~p~~g  176 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG-----------RVALPALG  176 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc-----------CccCcccc
Confidence            88999998531                     12    333344444 4569999998653           12222223


Q ss_pred             cc-ccHHHHHHHH-------HhcCCceEEeeccee
Q 025908          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYI  154 (246)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~ilR~~~i  154 (246)
                      .| .+|..+|.+.       +..|+++.++-||.+
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            44 8999998764       458999999999943

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.50  E-value=6.8e-06  Score=57.32  Aligned_cols=190  Identities=19%  Similarity=0.261  Sum_probs=114.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||.+-+|++.++.|.++|..|..++-..++-..        -..++.+++.+...|+++++++..++...     +.|+
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~--------vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGAD--------VAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchH--------HHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            6888999999999999999999999887766321        11233578999999999999998888642     6899


Q ss_pred             EEecCCCCcc--------------------------chHHHHHh----CC------CCce--EEEEeecceeccCCCCCC
Q 025908           76 VYDINGREAD--------------------------EVEPILDA----LP------NLEQ--FIYCSSAGVYLKSDLLPH  117 (246)
Q Consensus        76 vi~~~~~~~~--------------------------~~~~l~~a----~~------~~~~--~i~~Ss~~v~~~~~~~~~  117 (246)
                      .++|+|....                          ++-|++..    +.      +-+|  +|...|..+|....+   
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g---  163 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG---  163 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc---
Confidence            9999986311                          12222211    10      1122  333333444432221   


Q ss_pred             CCCCCCCCCCcc-ccHHHH-------HHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          118 CETDTVDPKSRH-KGKLNT-------ESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~-------e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                              ...| .+|...       .+-+...||+++.+-|+.+-.|-- .........-+.+  .++++..      .
T Consensus       164 --------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpll-sslpekv~~fla~--~ipfpsr------l  226 (260)
T KOG1199|consen  164 --------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLL-SSLPEKVKSFLAQ--LIPFPSR------L  226 (260)
T ss_pred             --------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhh-hhhhHHHHHHHHH--hCCCchh------c
Confidence                    1122 445433       233344689999999987655521 1111111111111  2233221      3


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCeeEEeeCC
Q 025908          190 GHVKDLARAFVQVLGNEKASRQVFNISGE  218 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~~~~~  218 (246)
                      -+..+.+..+..+++++..++++..+.+.
T Consensus       227 g~p~eyahlvqaiienp~lngevir~dga  255 (260)
T KOG1199|consen  227 GHPHEYAHLVQAIIENPYLNGEVIRFDGA  255 (260)
T ss_pred             CChHHHHHHHHHHHhCcccCCeEEEecce
Confidence            34678889999999999888888877664

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.50  E-value=7.3e-07  Score=68.09  Aligned_cols=142  Identities=20%  Similarity=0.162  Sum_probs=90.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH----HHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----~~~~~~~~~~~d~v   76 (246)
                      ||||..||++.+++|.++|.+|..++|..++...... +.+   +...-.+.++..|+++.+    .+.+.+.+.++.++
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~k-EI~---~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgIL  130 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAK-EIE---EKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGIL  130 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHH---HHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEE
Confidence            7999999999999999999999999999988432111 111   111235777889998654    46666676789999


Q ss_pred             EecCCCCccchH--------------------------HHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           77 YDINGREADEVE--------------------------PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        77 i~~~~~~~~~~~--------------------------~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ||++|...+.-.                          -++--+.  +...++.+||.+-.           .|..-...
T Consensus       131 VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~s~  199 (312)
T KOG1014|consen  131 VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLLSV  199 (312)
T ss_pred             EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhHHH
Confidence            999997543211                          1111111  34467777764431           12222233


Q ss_pred             c-ccHHHHHHHH-------HhcCCceEEeecceeeCC
Q 025908          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~  157 (246)
                      | .+|...+.+.       +..|+.+..+-|..+-++
T Consensus       200 ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  200 YSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence            4 6777554432       346888888888877665

>PRK09620 hypothetical protein; Provisional

Probab=98.45  E-value=5.6e-07  Score=67.45  Aligned_cols=71  Identities=17%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      .|||+|.+|++.|+++|++|+++++.........+.         ...+..+.++....+.+.+++++.++|+|||+|+.
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            579999999999999999999998754321111110         12233455533334677777865589999999987

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.44  E-value=1.2e-05  Score=58.72  Aligned_cols=179  Identities=17%  Similarity=0.190  Sum_probs=108.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------C
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~   71 (246)
                      |||+-.||-.|+++|++. |.++++- +|+++...+.+..     +..-.+++.+++.|+++.+++.++.++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~-----k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELAL-----KSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHH-----hhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            799999999999999986 5555544 4445553211110     011158999999999987777666543       4


Q ss_pred             CccEEEecCCCCcc----------------------------chHHHHHhCC----------CCceEEEEeecceeccCC
Q 025908           72 GFDVVYDINGREAD----------------------------EVEPILDALP----------NLEQFIYCSSAGVYLKSD  113 (246)
Q Consensus        72 ~~d~vi~~~~~~~~----------------------------~~~~l~~a~~----------~~~~~i~~Ss~~v~~~~~  113 (246)
                      +.+++++++|....                            ....|+..++          ....+|++||...-    
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s----  159 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS----  159 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence            78999999986311                            1222333222          23478888875541    


Q ss_pred             CCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCc
Q 025908          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                          .......+...| .+|.+.-.+.+       +..+-++.+.||+|-...                      +.   
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM----------------------gg---  210 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM----------------------GG---  210 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC----------------------CC---
Confidence                111223334456 78888766554       345677788888875431                      10   


Q ss_pred             eeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeC
Q 025908          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNISG  217 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~  217 (246)
                      ....+++++-+..++..+.+  +.++|..|+-.+
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence            12345677777777777643  445666666543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.42  E-value=1.2e-07  Score=73.27  Aligned_cols=101  Identities=19%  Similarity=0.229  Sum_probs=73.0

Q ss_pred             CCccccchHHHHHHHHH----CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      .|||||.|..+++++++    .+...-+..|+..+..+.+.+........+...+ ++.+|.+|++++.+..+  .+.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999999    6788999999988754433322211111123444 89999999999999998  99999


Q ss_pred             EecCCCCccchHHHHHhCC-CCceEEEEe
Q 025908           77 YDINGREADEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      +||+|+-.-+-++++++|- +-.+.|-+|
T Consensus        88 vN~vGPyR~hGE~VVkacienG~~~vDIS  116 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKACIENGTHHVDIS  116 (423)
T ss_pred             EeccccceecCcHHHHHHHHcCCceeccC
Confidence            9999987666666666654 333334343

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.37  E-value=0.00011  Score=57.78  Aligned_cols=201  Identities=7%  Similarity=-0.028  Sum_probs=103.0

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCC-------CccccCCC-C---CCch-----h---hhhhcCceEEEEccCC
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-------APIAQQLP-G---ESDQ-----E---FAEFSSKILHLKGDRK   59 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~-------~~~~~~~~-~---~~~~-----~---~~~~~~~v~~~~~D~~   59 (246)
                      |||+  .-||+++++.|.++|.+|++.+|.+       +....... .   ....     +   ........+-+.+|+.
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            6884  8999999999999999999876542       00000000 0   0000     0   0000011222222222


Q ss_pred             C--------HHHHHHhhh----c-CCccEEEecCCCCc---c-------------------c----hHHHHHhCCCCceE
Q 025908           60 D--------YDFVKSSLS----A-KGFDVVYDINGREA---D-------------------E----VEPILDALPNLEQF  100 (246)
Q Consensus        60 ~--------~~~~~~~~~----~-~~~d~vi~~~~~~~---~-------------------~----~~~l~~a~~~~~~~  100 (246)
                      +        .+++.++++    + .++|++||++|...   .                   +    ++.++..++...++
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i  173 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST  173 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence            2        112333332    2 25999999987521   1                   0    12233334333578


Q ss_pred             EEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH-------h-cCCceEEeecceeeCCCCCC-chHHHHHHHH
Q 025908          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRL  171 (246)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~  171 (246)
                      |.+||....-.         .+.....|..+|..++.+.+       . .|++++.+.|+.+-.+.... ..........
T Consensus       174 i~iss~~~~~~---------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~  244 (299)
T PRK06300        174 ISLTYLASMRA---------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYY  244 (299)
T ss_pred             EEEeehhhcCc---------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHH
Confidence            88887554211         01100123488988876552       2 38999999999876653110 0001111111


Q ss_pred             HhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ....++         ..+...+|+++++++++...  ...++++.+.++.
T Consensus       245 ~~~~p~---------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        245 QDWAPL---------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111111         12346899999999998642  3467777777763

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.33  E-value=8e-06  Score=62.52  Aligned_cols=142  Identities=19%  Similarity=0.238  Sum_probs=89.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc-ccCCCCCCchhhhhhc-CceEEEEccCCC-HHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~-~~v~~~~~D~~~-~~~~~~~~~~-----~~   72 (246)
                      |||++.||.++++.|.+.|++|+++.|..... ...+...    ..... ..+....+|+++ .+++..+++.     .+
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAA----IKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHH----HHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999888886641 1111000    00001 367778899998 8777666643     24


Q ss_pred             ccEEEecCCCCcc---------------------chHHHHHhCC-CCc--eEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           73 FDVVYDINGREAD---------------------EVEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        73 ~d~vi~~~~~~~~---------------------~~~~l~~a~~-~~~--~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|+++|++|....                     +...+..++. ..+  ++|++||.... ....          ....
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~----------~~~~  155 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP----------GQAA  155 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC----------Ccch
Confidence            8999999987431                     0111122111 122  89999987753 2111          0233


Q ss_pred             c-ccHHHHHHHH-------HhcCCceEEeecceeeCC
Q 025908          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~  157 (246)
                      | .+|...+.+.       ...|++++.+.|+.+-.+
T Consensus       156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            4 8888887654       236799999999955433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.29  E-value=7.7e-06  Score=79.75  Aligned_cols=147  Identities=16%  Similarity=0.048  Sum_probs=95.1

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCcc-----ccC-----------------------------CCCC---Cc-
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI-----AQQ-----------------------------LPGE---SD-   41 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~-----~~~-----------------------------~~~~---~~-   41 (246)
                      |||++.||..+++.|.++ |.+|+++.|+....     ...                             ....   .+ 
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 68999999983110     000                             0000   00 


Q ss_pred             ----hhhhhhcCceEEEEccCCCHHHHHHhhhcC----CccEEEecCCCCcc--------------------chHHHHHh
Q 025908           42 ----QEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGREAD--------------------EVEPILDA   93 (246)
Q Consensus        42 ----~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~vi~~~~~~~~--------------------~~~~l~~a   93 (246)
                          ....+....+.++.+|++|.+++.+++++.    ++|.|||++|....                    +..+++++
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence                011122356888999999998888777542    58999999997322                    34556666


Q ss_pred             CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH----h-cCCceEEeecceeeCC
Q 025908           94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE----S-KGVNWTSLRPVYIYGP  157 (246)
Q Consensus        94 ~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~----~-~~~~~~ilR~~~i~g~  157 (246)
                      +.  ..+++|++||...+-...          ....|..+|.....+.+    + .+++++.+.+|.+-++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNT----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCC----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            54  457899999876532111          11224367766655432    2 3578888999877654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.27  E-value=1.5e-06  Score=69.41  Aligned_cols=90  Identities=24%  Similarity=0.276  Sum_probs=68.0

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+|++|+.++..|.+++ .+|++.+|+.++..+....        ...+++..+.|..|.+++.++++  +.|+||+++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--------ccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            34999999999999998 8999999998774332211        02479999999999999999998  7799999998


Q ss_pred             CCccchHHHHHhCC-CCceEEEEe
Q 025908           82 READEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        82 ~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      .....  +++++|- ...+++-+|
T Consensus        78 ~~~~~--~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PFVDL--TILKACIKTGVDYVDTS   99 (389)
T ss_pred             chhhH--HHHHHHHHhCCCEEEcc
Confidence            75433  6666654 223444333

>PRK06720 hypothetical protein; Provisional

Probab=98.20  E-value=4.1e-06  Score=59.99  Aligned_cols=78  Identities=19%  Similarity=0.225  Sum_probs=56.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||.++++.|.+.|++|+++.|+........     .+.......+..+.+|+++.+++.+++++     .++|+
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-----EEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998754321100     00111123566789999998887776532     26999


Q ss_pred             EEecCCCC
Q 025908           76 VYDINGRE   83 (246)
Q Consensus        76 vi~~~~~~   83 (246)
                      +||++|..
T Consensus        97 lVnnAG~~  104 (169)
T PRK06720         97 LFQNAGLY  104 (169)
T ss_pred             EEECCCcC
Confidence            99999853

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.19  E-value=5.2e-06  Score=62.47  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEEec
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~   79 (246)
                      .+||++|.+|++.|+++|++|+++.|......  ..          ..++.++.++..+  .+.+.+.+.  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            47999999999999999999999987643211  01          1356666654322  245555665  79999999


Q ss_pred             CCCC
Q 025908           80 NGRE   83 (246)
Q Consensus        80 ~~~~   83 (246)
                      |+..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9974

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.17  E-value=6.7e-06  Score=62.64  Aligned_cols=83  Identities=16%  Similarity=0.143  Sum_probs=61.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||||. |+.|++.|.+.|++|++.++..... ..+..          .+...+..+..+.+++.+++++.++++||+++
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~-~~~~~----------~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK-HLYPI----------HQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCcc-ccccc----------cCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599999 9999999999999999999988762 22221          22334445666778899999888999999998


Q ss_pred             CCCcc-chHHHHHhCC
Q 025908           81 GREAD-EVEPILDALP   95 (246)
Q Consensus        81 ~~~~~-~~~~l~~a~~   95 (246)
                      ..... -.+++.++|+
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            76432 3445555554

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.09  E-value=2.8e-06  Score=69.31  Aligned_cols=90  Identities=22%  Similarity=0.296  Sum_probs=64.1

Q ss_pred             CCccccchHHHHHHHHHCC-C-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +|+ |++|+.+++.|.+++ + +|++.+|+..+........       ...+++.+..|+.|.+++.++++  +.|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999986 4 8999999987743222110       14789999999999999999998  8899999


Q ss_pred             cCCCCccchHHHHHhCC-CCceEEE
Q 025908           79 INGREADEVEPILDALP-NLEQFIY  102 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~-~~~~~i~  102 (246)
                      +++..  ....++++|. ...++|-
T Consensus        74 ~~gp~--~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPF--FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGG--GHHHHHHHHHHHT-EEEE
T ss_pred             CCccc--hhHHHHHHHHHhCCCeec
Confidence            99876  5556676665 2335554

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.76  E-value=2.4e-05  Score=57.49  Aligned_cols=76  Identities=21%  Similarity=0.208  Sum_probs=55.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|.+|+.+++.|.+.|++|+++.|+..+......     ... ...+..+..+|..+.+++.++++  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~-----~l~-~~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAAD-----SLR-ARFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHH-hhcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            5899999999999999999999999998654221110     000 01245566778888888888887  899999987


Q ss_pred             CCCc
Q 025908           81 GREA   84 (246)
Q Consensus        81 ~~~~   84 (246)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            6543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.73  E-value=5.9e-05  Score=59.85  Aligned_cols=74  Identities=14%  Similarity=0.043  Sum_probs=46.9

Q ss_pred             CCccccchHHHHHHHHHCC-------CeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   72 (246)
                      |||+|++|++++..|+..+       .+++++++++... .....-+       +.+.......|+....++.+.++  +
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-------l~d~~~~~~~~~~~~~~~~~~l~--~   78 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-------LQDCAFPLLKSVVATTDPEEAFK--D   78 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-------hhhccccccCCceecCCHHHHhC--C
Confidence            6999999999999999854       5899999965421 1110000       00111112234443455667787  9


Q ss_pred             ccEEEecCCCC
Q 025908           73 FDVVYDINGRE   83 (246)
Q Consensus        73 ~d~vi~~~~~~   83 (246)
                      +|+|||+||..
T Consensus        79 aDiVI~tAG~~   89 (325)
T cd01336          79 VDVAILVGAMP   89 (325)
T ss_pred             CCEEEEeCCcC
Confidence            99999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.71  E-value=8.3e-05  Score=58.68  Aligned_cols=148  Identities=20%  Similarity=0.173  Sum_probs=84.6

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..++..|...+  .++..+++.... ...+ +...       ........+.+|+.++.++++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~-Dl~~-------~~~~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAA-DLSH-------IDTPAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-cccc-chhh-------cCcCceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998655  689999883211 1111 1000       011223345555555567787  9999999


Q ss_pred             cCCCCcc--------------chHHHHHhCC--CCceEEEEeecceeccCCCC--CCCCCCCCCCCCcc-ccHHHHHH--
Q 025908           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTES--  137 (246)
Q Consensus        79 ~~~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~e~--  137 (246)
                      ++|....              .+++++++++  +.+++|+++|-.+.....-.  ...+.....|...+ .+-...-+  
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9997432              2455666665  88999999996653211000  01122233333333 22222222  


Q ss_pred             -HH-HhcCCceEEeecceeeCCCCC
Q 025908          138 -VL-ESKGVNWTSLRPVYIYGPLNY  160 (246)
Q Consensus       138 -~~-~~~~~~~~ilR~~~i~g~~~~  160 (246)
                       ++ +..+++...++ +.++|.+..
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence             22 34677777777 778886543

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.68  E-value=0.0029  Score=46.76  Aligned_cols=186  Identities=13%  Similarity=0.133  Sum_probs=107.3

Q ss_pred             cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccEEEecC
Q 025908            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVYDIN   80 (246)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~vi~~~   80 (246)
                      .|+..|++.|.++|.++......+ +..+.+.     ++.+......+++||+++.+++.+++++     .+.|.++|+.
T Consensus        19 SIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~-----~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsI   92 (259)
T COG0623          19 SIAWGIAKALAEQGAELAFTYQGE-RLEKRVE-----ELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSI   92 (259)
T ss_pred             cHHHHHHHHHHHcCCEEEEEeccH-HHHHHHH-----HHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEe
Confidence            578899999999999988877665 2111111     1111123456799999998888888764     2799999998


Q ss_pred             CCCccc------------------------hHHHHHhCC----CCceEEEEe---ecceeccCCCCCCCCCCCCCCCC--
Q 025908           81 GREADE------------------------VEPILDALP----NLEQFIYCS---SAGVYLKSDLLPHCETDTVDPKS--  127 (246)
Q Consensus        81 ~~~~~~------------------------~~~l~~a~~----~~~~~i~~S---s~~v~~~~~~~~~~e~~~~~~~~--  127 (246)
                      +.....                        ...+.++++    ....++-+|   +.-+               -|..  
T Consensus        93 aFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~---------------vPnYNv  157 (259)
T COG0623          93 AFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV---------------VPNYNV  157 (259)
T ss_pred             ccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee---------------cCCCch
Confidence            764310                        112333322    222333222   2111               1221  


Q ss_pred             ccccHHHHHHHHH-------hcCCceEEeecceeeCCC-CCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      -..+|...|.-+|       ..|+++.-+-.|.+=.-- ..-.-+..++.......++         ...++++|+++..
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl---------~r~vt~eeVG~tA  228 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL---------RRNVTIEEVGNTA  228 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc---------cCCCCHHHhhhhH
Confidence            2378988887553       346777776665432110 0001133444444333333         2355699999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCeee
Q 025908          200 VQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      +.++.+  ....|++.++.+|..+
T Consensus       229 ~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         229 AFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HHHhcchhcccccceEEEcCCcee
Confidence            998864  2346888888887653

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.67  E-value=0.00011  Score=55.17  Aligned_cols=88  Identities=25%  Similarity=0.350  Sum_probs=66.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~   81 (246)
                      |.|.+|..+++.|.+.|++|.++.+++.........         ......+.+|-++++.+.++ +.  ++|+++-+.+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            679999999999999999999999998875432221         25788899999999999988 55  8999998887


Q ss_pred             CCccchHHHHHhCC--CCceEE
Q 025908           82 READEVEPILDALP--NLEQFI  101 (246)
Q Consensus        82 ~~~~~~~~l~~a~~--~~~~~i  101 (246)
                      ..........-+++  +++++|
T Consensus        76 ~d~~N~i~~~la~~~~gv~~vi   97 (225)
T COG0569          76 NDEVNSVLALLALKEFGVPRVI   97 (225)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEE
Confidence            65443332223333  666666

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.61  E-value=0.00022  Score=58.12  Aligned_cols=64  Identities=16%  Similarity=0.098  Sum_probs=49.0

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--CCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi~~~~   81 (246)
                      +|.+|.++++.|.++|++|+++.+..+. .  .           ..+  +..+|+++.+++.+++.+  .++|++||+|+
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~-----------~~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL-P--T-----------PAG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc-c--C-----------CCC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999886532 1  1           122  245688888888777753  26899999998


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus       277 v~  278 (399)
T PRK05579        277 VA  278 (399)
T ss_pred             cc
Confidence            63

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.60  E-value=4.5e-05  Score=58.93  Aligned_cols=83  Identities=19%  Similarity=0.219  Sum_probs=57.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      .|||||.|..++++|.++|.+-..-.|+..+....-.        .+......+  .+.++..+++.++  +.++|+||+
T Consensus        12 YGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~--------~LG~~~~~~--p~~~p~~~~~~~~--~~~VVlncv   79 (382)
T COG3268          12 YGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA--------SLGPEAAVF--PLGVPAALEAMAS--RTQVVLNCV   79 (382)
T ss_pred             EccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH--------hcCcccccc--CCCCHHHHHHHHh--cceEEEecc
Confidence            3999999999999999999888777887766321100        011333333  3344888888888  999999999


Q ss_pred             CCCccchHHHHHhCC
Q 025908           81 GREADEVEPILDALP   95 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~   95 (246)
                      |+-......++++|.
T Consensus        80 GPyt~~g~plv~aC~   94 (382)
T COG3268          80 GPYTRYGEPLVAACA   94 (382)
T ss_pred             ccccccccHHHHHHH
Confidence            986554444554443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.58  E-value=0.00013  Score=54.87  Aligned_cols=65  Identities=20%  Similarity=0.281  Sum_probs=45.0

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccEE
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVV   76 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~v   76 (246)
                      .++|.+|.++++.|.++|++|+++.+....     ..          ..  ...+|+.+.+++.++++.     .++|++
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-----~~----------~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-----KP----------EP--HPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhhc-----cc----------cc--CCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999998763211     00          00  124677776665554432     268999


Q ss_pred             EecCCCC
Q 025908           77 YDINGRE   83 (246)
Q Consensus        77 i~~~~~~   83 (246)
                      ||+||..
T Consensus        85 VnnAgv~   91 (227)
T TIGR02114        85 IHSMAVS   91 (227)
T ss_pred             EECCEec
Confidence            9999864

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00106 malate dehydrogenase

Probab=97.49  E-value=0.00026  Score=56.01  Aligned_cols=146  Identities=19%  Similarity=0.150  Sum_probs=81.4

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||++|.+|..++..|...+  .++..+++++.. ...+. ..       +........++.+.+++.++++  ++|+||+
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~D-l~-------~~~~~~~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAAD-VS-------HINTPAQVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEch-hh-------hCCcCceEEEEeCCCCHHHHcC--CCCEEEE
Confidence            6889999999999999766  489999887622 11111 00       0111112234334445667787  9999999


Q ss_pred             cCCCCcc--------------chHHHHHhCC--CCceEEEEeecceeccC--CCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        79 ~~~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      ++|....              .++++.+.++  +.+.+++++|--+-+..  ............|...+ .++...+++-
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            9997432              2445555554  67788888875542100  00000112223333333 4555555532


Q ss_pred             ----HhcCCceEEeecceeeCCC
Q 025908          140 ----ESKGVNWTSLRPVYIYGPL  158 (246)
Q Consensus       140 ----~~~~~~~~ilR~~~i~g~~  158 (246)
                          +..+++...++ +.++|.+
T Consensus       173 ~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        173 TFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHhCCChhheE-EEEEEeC
Confidence                44677666664 3456644

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.44  E-value=0.00091  Score=50.04  Aligned_cols=78  Identities=15%  Similarity=0.199  Sum_probs=54.6

Q ss_pred             CCccccchHHHHHHHHHCCC-----eEEEEecCCCccccCCCCCCchhhhhh----cCceEEEEccCCCHHHHHHhhhc-
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLSA-   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-----~V~~l~r~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~-   70 (246)
                      ||+++.+|-+|+..|++...     .+.+.+|+-++..+....     +.+.    .-.++++..|+++..++..+.++ 
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~-----lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAA-----LKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHH-----HHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            79999999999999998743     577788887764221110     0011    24688899999997766655432 


Q ss_pred             ----CCccEEEecCCCC
Q 025908           71 ----KGFDVVYDINGRE   83 (246)
Q Consensus        71 ----~~~d~vi~~~~~~   83 (246)
                          ...|.|+-.||.+
T Consensus        84 ~~rf~~ld~iylNAg~~  100 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIM  100 (341)
T ss_pred             HHHhhhccEEEEccccC
Confidence                2789999888863

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.36  E-value=0.00031  Score=56.93  Aligned_cols=96  Identities=20%  Similarity=0.251  Sum_probs=60.0

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHH-hhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~~~~~d~vi~   78 (246)
                      +||||++|..|++.|.++ ..++..+++..+. .+.+..          ....+..+|..+.++++. .++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            599999999999999999 5799999886443 111111          011112233332222222 244  8999998


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeecceecc
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v~~~  111 (246)
                      +.+.  ....+++.+++...++|-+|+..-+.+
T Consensus       111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            8765  355566666553468999998776543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.34  E-value=0.00063  Score=54.65  Aligned_cols=82  Identities=11%  Similarity=0.053  Sum_probs=54.1

Q ss_pred             CCccccchHH--HHHHHHHCCCeEEEEecCCCccccC------CCC-CCchhhhhhcCceEEEEccCCCHHHHHHhhhc-
Q 025908            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ------LPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (246)
Q Consensus         1 ~GatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~------~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-   70 (246)
                      ||+++.+|.+  +++.| +.|.+|.++++...+....      ... ............+..+.+|+++++.+.++++. 
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            6999999999  89999 9999999888643221100      000 00011111123466789999998887777653 


Q ss_pred             ----CCccEEEecCCCC
Q 025908           71 ----KGFDVVYDINGRE   83 (246)
Q Consensus        71 ----~~~d~vi~~~~~~   83 (246)
                          .++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                2699999998764

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.93  E-value=0.0031  Score=45.78  Aligned_cols=65  Identities=15%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||..|.+|++.+..+|++|+.+.....-..              ..+++.+...-.+  .+.+.+.+.  +.|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP--------------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCccccc--------------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            6899999999999999999999988743210              2577777655332  234444454  679999999


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        91 AVs   93 (185)
T PF04127_consen   91 AVS   93 (185)
T ss_dssp             B--
T ss_pred             chh
Confidence            863

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.77  E-value=0.001  Score=52.89  Aligned_cols=64  Identities=22%  Similarity=0.249  Sum_probs=44.1

Q ss_pred             CCccccchHHHHHHHHHC-C-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+|++|+.+++.|.++ | .+++++.|+..+.. .+..             ++..+++.   .+.+++.  ++|+|+|
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~-~La~-------------el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ-ELQA-------------ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH-HHHH-------------HhccccHH---hHHHHHc--cCCEEEE
Confidence            699999999999999865 4 68999888755421 1110             11123332   3557777  8999999


Q ss_pred             cCCCC
Q 025908           79 INGRE   83 (246)
Q Consensus        79 ~~~~~   83 (246)
                      +++..
T Consensus       222 ~ts~~  226 (340)
T PRK14982        222 VASMP  226 (340)
T ss_pred             CCcCC
Confidence            99864

>cd00704 MDH Malate dehydrogenase

Probab=96.67  E-value=0.0042  Score=49.38  Aligned_cols=73  Identities=14%  Similarity=0.125  Sum_probs=42.1

Q ss_pred             CCccccchHHHHHHHHHCC-------CeEEEEecCC--CccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-------~~V~~l~r~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   71 (246)
                      +||+|.+|+.++..|...+       ++++.++++.  +.......+...... ....++. +.      ....+.++  
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~-~~~~~~~-i~------~~~~~~~~--   75 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAF-PLLKGVV-IT------TDPEEAFK--   75 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcc-cccCCcE-Ee------cChHHHhC--
Confidence            6999999999999998765       2588888876  321111100000000 0001111 11      23355676  


Q ss_pred             CccEEEecCCCC
Q 025908           72 GFDVVYDINGRE   83 (246)
Q Consensus        72 ~~d~vi~~~~~~   83 (246)
                      ++|+||+++|..
T Consensus        76 ~aDiVVitAG~~   87 (323)
T cd00704          76 DVDVAILVGAFP   87 (323)
T ss_pred             CCCEEEEeCCCC
Confidence            999999999974

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.64  E-value=0.0053  Score=49.18  Aligned_cols=85  Identities=18%  Similarity=0.180  Sum_probs=51.8

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|+.|++.|.+++|   ++.++++..+.. +.+.          ..+..+...|+.+.     .++  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g-~~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSAG-KELS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC-Ceee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            59999999999999999876   457887765441 1121          12234444455431     234  899999


Q ss_pred             ecCCCCccchHHHHHhC-C-CCceEEEEeec
Q 025908           78 DINGREADEVEPILDAL-P-NLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~-~~~~~i~~Ss~  106 (246)
                      .+++..  ....+...+ . +. .+|-+|+.
T Consensus        69 ~A~g~g--~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         69 FSAGGS--VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             ECCChH--HHHHHHHHHHhCCC-EEEECCch
Confidence            888654  233333332 2 43 66666653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.62  E-value=0.0027  Score=53.14  Aligned_cols=68  Identities=15%  Similarity=0.254  Sum_probs=53.6

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~   80 (246)
                      |+ |.+|+++++.|.+.|++|+++.+++........          ..++.++.+|.++.+.+.++ ++  ++|.|+-+.
T Consensus         7 G~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~   73 (453)
T PRK09496          7 GA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVT   73 (453)
T ss_pred             CC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEec
Confidence            54 999999999999999999999997765321111          24688999999998888887 65  899998776


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      ..
T Consensus        74 ~~   75 (453)
T PRK09496         74 DS   75 (453)
T ss_pred             CC
Confidence            53

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.61  E-value=0.0071  Score=49.29  Aligned_cols=65  Identities=18%  Similarity=0.231  Sum_probs=47.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHH-HHhhhc--CCccEEEec
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDI   79 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~~--~~~d~vi~~   79 (246)
                      .||.+|.++++.|..+|++|+++.+.....   .           ..++  ...|+.+.+++ +.++++  .++|++|++
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~-----------~~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---T-----------PPGV--KSIKVSTAEEMLEAALNELAKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC---C-----------CCCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence            357899999999999999999988765431   1           1223  45688887777 444422  268999999


Q ss_pred             CCCC
Q 025908           80 NGRE   83 (246)
Q Consensus        80 ~~~~   83 (246)
                      |+..
T Consensus       273 Aavs  276 (390)
T TIGR00521       273 AAVA  276 (390)
T ss_pred             cccc
Confidence            9873

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.54  E-value=0.0091  Score=47.31  Aligned_cols=95  Identities=20%  Similarity=0.212  Sum_probs=55.6

Q ss_pred             CCccccchHHHHHHHHH-C--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|.+++..|.. .  ++++.+++|++......+. ...      .+....+.+  .+.+++.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alD-l~~------~~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVD-LSH------IPTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehh-hhc------CCCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            59999999999998855 2  4678888876432100010 000      011122223  12234445666  899999


Q ss_pred             ecCCCCcc--------------chHHHHHhCC--CCceEEEEeec
Q 025908           78 DINGREAD--------------EVEPILDALP--NLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~  106 (246)
                      .++|....              ..++++++++  +.+++|.+.|-
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99997432              2444555655  66778877763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.54  E-value=0.0058  Score=48.62  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=24.9

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~   31 (246)
                      +||+|.+|..++..|...+.       +++.+++.+..
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~   42 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM   42 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence            58899999999999987542       58888886543

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.53  E-value=0.049  Score=40.42  Aligned_cols=177  Identities=16%  Similarity=0.188  Sum_probs=95.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHH---HHHhhhc--CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSA--KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~--~~~d~   75 (246)
                      ||+|--||..+++.+...+.+.....+......  .....    .++.+......+|.+....   +.++.++  ..-|.
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~----v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLK----VAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceE----EEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            799999999999999998866554444433321  11000    0001222333344443332   2233322  25899


Q ss_pred             EEecCCCCcc------------c---------------hHHHHHhCC-C--CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD------------E---------------VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~------------~---------------~~~l~~a~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |||+||..-+            .               ....+...+ .  .+.++++||....           .|...
T Consensus        86 iI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~p~~~  154 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------RPFSS  154 (253)
T ss_pred             EEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------ccccH
Confidence            9999986211            0               111222233 2  3678899986652           23333


Q ss_pred             CCcc-ccHHHHHHHHH-----hc-CCceEEeecceeeCCCC-----CCchHHH---HHHHHHhCCCcccCCCCCceeeee
Q 025908          126 KSRH-KGKLNTESVLE-----SK-GVNWTSLRPVYIYGPLN-----YNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-----~~-~~~~~ilR~~~i~g~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      ...| .+|++.+.+++     ++ ++.+..++||.+-.+..     .....+.   ++...++.            -..+
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~------------~~ll  222 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES------------GQLL  222 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc------------CCcC
Confidence            3445 78998888764     44 67888899987765421     1111111   22222222            2344


Q ss_pred             eHHHHHHHHHHHhcCC
Q 025908          191 HVKDLARAFVQVLGNE  206 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~  206 (246)
                      +..+.++.+..++++.
T Consensus       223 ~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  223 DPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ChhhHHHHHHHHHHhc
Confidence            4677788888887764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.45  E-value=0.0029  Score=49.58  Aligned_cols=75  Identities=12%  Similarity=0.120  Sum_probs=50.8

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCC---CccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +|| |.+|++++..|.+.|.+ |+++.|+.   .+..+ +.+    +.......+.+..+|+.+.+.+.+.++  .+|+|
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~-l~~----~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil  203 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQ-TAE----KIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL  203 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHH-HHH----HHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence            477 89999999999999975 99999986   23211 110    001111334556678888777877776  78999


Q ss_pred             EecCCCC
Q 025908           77 YDINGRE   83 (246)
Q Consensus        77 i~~~~~~   83 (246)
                      ||+....
T Consensus       204 INaTp~G  210 (289)
T PRK12548        204 VNATLVG  210 (289)
T ss_pred             EEeCCCC
Confidence            9987553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.36  E-value=0.0067  Score=40.84  Aligned_cols=92  Identities=18%  Similarity=0.125  Sum_probs=46.8

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +||||++|+.+++.|.++. .++..+..+.....+.+.....    ...........+ .+.+.+    .  ++|+||.+
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~----~--~~Dvvf~a   73 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFP----HPKGFEDLSVED-ADPEEL----S--DVDVVFLA   73 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTG----GGTTTEEEBEEE-TSGHHH----T--TESEEEE-
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcc----ccccccceeEee-cchhHh----h--cCCEEEec
Confidence            5999999999999999975 4655554444421111111000    000111221222 344443    4  99999999


Q ss_pred             CCCCccchHHHHHhC-CCCceEEEEee
Q 025908           80 NGREADEVEPILDAL-PNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~-~~~~~~i~~Ss  105 (246)
                      .+..  ....+...+ +...++|-+|+
T Consensus        74 ~~~~--~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   74 LPHG--ASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             SCHH--HHHHHHHHHHHTTSEEEESSS
T ss_pred             Cchh--HHHHHHHHHhhCCcEEEeCCH
Confidence            7542  233344333 23336666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.31  E-value=0.005  Score=41.02  Aligned_cols=68  Identities=18%  Similarity=0.207  Sum_probs=51.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|.+.+.+|.++.+++.......           ..++.++.+|.++++.++++=- .+++.++-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence            4578999999999997779999999876632211           3568999999999998887543 388888877653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.23  E-value=0.0099  Score=47.67  Aligned_cols=65  Identities=15%  Similarity=0.273  Sum_probs=41.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEE---EEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~---~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|+.|++.|.+++|++.   .+.+..+. .+.+.          ..+......|+. .+    .++  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-g~~~~----------~~~~~~~~~~~~-~~----~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-GRKVT----------FKGKELEVNEAK-IE----SFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-CCeee----------eCCeeEEEEeCC-hH----Hhc--CCCEEE
Confidence            59999999999999999887644   44455333 11111          123455555553 22    234  899999


Q ss_pred             ecCCCC
Q 025908           78 DINGRE   83 (246)
Q Consensus        78 ~~~~~~   83 (246)
                      .+++..
T Consensus        67 ~a~g~~   72 (339)
T TIGR01296        67 FSAGGS   72 (339)
T ss_pred             ECCCHH
Confidence            888764

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.19  E-value=0.0083  Score=47.91  Aligned_cols=88  Identities=15%  Similarity=0.154  Sum_probs=49.2

Q ss_pred             CCccccchHHHHHHHHHCCCe---EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|..+++.|.+++|.   +..+... ....+.+.          ..+.   ..++.+.+.. + ++  ++|+||
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~----------~~~~---~l~~~~~~~~-~-~~--~vD~vF   71 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP----------FAGK---NLRVREVDSF-D-FS--QVQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec----------cCCc---ceEEeeCChH-H-hc--CCCEEE
Confidence            599999999999999987653   3344333 22111111          0121   2233222221 1 44  899999


Q ss_pred             ecCCCCccchHHHHHhCC-CCceEEEEeecce
Q 025908           78 DINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v  108 (246)
                      .+.+..  ....++..+. ...++|-.|+..-
T Consensus        72 la~p~~--~s~~~v~~~~~~G~~VIDlS~~fR  101 (336)
T PRK05671         72 FAAGAA--VSRSFAEKARAAGCSVIDLSGALP  101 (336)
T ss_pred             EcCCHH--HHHHHHHHHHHCCCeEEECchhhc
Confidence            888642  3344555543 3346777776553

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.16  E-value=0.066  Score=39.48  Aligned_cols=105  Identities=17%  Similarity=0.246  Sum_probs=62.7

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC---------CC--------chhhhhhcCceEE--EEccCCC-
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG---------ES--------DQEFAEFSSKILH--LKGDRKD-   60 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~---------~~--------~~~~~~~~~~v~~--~~~D~~~-   60 (246)
                      |+ |-+|.++++.|...|. ++++++.+.-... .+..         ..        ..+..+..+.+++  +..++.+ 
T Consensus        26 G~-gglGsevak~L~~~GVg~i~lvD~d~ve~s-nl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~  103 (198)
T cd01485          26 GA-GALGAEIAKNLVLAGIDSITIVDHRLVSTE-DLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSN  103 (198)
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEECCcCChh-cCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccc
Confidence            44 4499999999999994 6888887643311 1110         00        0122334455544  3334432 


Q ss_pred             HHHHHHhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceecc
Q 025908           61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (246)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~  111 (246)
                      .+...+.++  ++|+||.+... ......+-+.|+ ....+|+.++.+.+|.
T Consensus       104 ~~~~~~~~~--~~dvVi~~~d~-~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485         104 DSNIEEYLQ--KFTLVIATEEN-YERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             hhhHHHHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            445566776  89999977543 333334556676 5568888888777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.15  E-value=0.015  Score=46.03  Aligned_cols=29  Identities=28%  Similarity=0.527  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..++..|.++|++|+++.|++..
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            47999999999999999999999998654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.88  E-value=0.0066  Score=43.23  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=49.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC--chhhhhhcCceEEEEccCCCHHHHHHhhhc-------CCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~   73 (246)
                      |.|.+|+.+++.|+++|++|++..|++.+..+......  .....+......++..-+.+.+.+.+++.+       ..=
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            46899999999999999999999998766322111000  000001112233444444454555444432       134


Q ss_pred             cEEEecCCCCccchHHHHHhCC
Q 025908           74 DVVYDINGREADEVEPILDALP   95 (246)
Q Consensus        74 d~vi~~~~~~~~~~~~l~~a~~   95 (246)
                      +++|+++.......+.+.+.++
T Consensus        88 ~iiid~sT~~p~~~~~~~~~~~  109 (163)
T PF03446_consen   88 KIIIDMSTISPETSRELAERLA  109 (163)
T ss_dssp             EEEEE-SS--HHHHHHHHHHHH
T ss_pred             eEEEecCCcchhhhhhhhhhhh
Confidence            5666666666666666666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.84  E-value=0.023  Score=47.60  Aligned_cols=70  Identities=26%  Similarity=0.343  Sum_probs=52.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|.+.|++|+++.++++.......         ...++.++.+|.++++.+.++-- .+++.||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~---------~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAE---------ELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---------HCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence            44999999999999999999999988765321111         02467889999999988865442 378998866553

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.78  E-value=0.11  Score=39.71  Aligned_cols=76  Identities=18%  Similarity=0.070  Sum_probs=58.0

Q ss_pred             chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCCcc-
Q 025908            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREAD-   85 (246)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~~~-   85 (246)
                      =|+.|++.|.+.|++|++.+-.....   ..          ..++.+..+-+.+.+++.++++++++++||++..+-.. 
T Consensus        13 egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~   79 (248)
T PRK08057         13 EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ   79 (248)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence            48899999999999888877665442   11          25778888998899999999999999999999876433 


Q ss_pred             chHHHHHhCC
Q 025908           86 EVEPILDALP   95 (246)
Q Consensus        86 ~~~~l~~a~~   95 (246)
                      -.+++.++|+
T Consensus        80 is~~a~~ac~   89 (248)
T PRK08057         80 ISANAAAACR   89 (248)
T ss_pred             HHHHHHHHHH
Confidence            3445666665

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.78  E-value=0.038  Score=43.13  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=60.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+.| +|.--++.....|++|+++++...+..+.+.          ..+.+.+..-..|++.++++.+  -.|.++|++
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            46666 8888888888889999999999866444333          2466665555557777777775  444444443


Q ss_pred             CC-CccchHHHHHhCCCCceEEEEee
Q 025908           81 GR-EADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~-~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .. .......++..++..-++|+++-
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~  280 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGL  280 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeC
Confidence            31 22345567777775568888884

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.70  E-value=0.018  Score=45.01  Aligned_cols=84  Identities=18%  Similarity=0.222  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|+..+.....           ..+...+     ..+++.++++  ++|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-----------~~g~~~~-----~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARIT-----------EMGLIPF-----PLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCeee-----cHHHHHHHhc--cCCEEEECCCh
Confidence            4588999999999999999999999865421100           1122211     2345667776  89999998754


Q ss_pred             CccchHHHHHhCCCCceEEEEee
Q 025908           83 EADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ... ....++.++...-+|-++|
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCc
Confidence            322 2345555554345565554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.69  E-value=0.023  Score=45.74  Aligned_cols=94  Identities=19%  Similarity=0.133  Sum_probs=53.0

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEE-EccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +||||++|+.+++.|.++ +.++.++.++... .+.+...        .+.+... ..++.+.+..  .+.  ++|+|+.
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~~--------~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSDV--------HPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHHh--------CcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            599999999999999987 5788887774322 1111100        0111111 1123333222  334  7999998


Q ss_pred             cCCCCccchHHHHHhC-CCCceEEEEeeccee
Q 025908           79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~v~  109 (246)
                      +....  ....++..+ +..+++|-.|+..-+
T Consensus        75 alP~~--~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPHG--VSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence            77542  333444443 344688888865543

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.68  E-value=0.03  Score=43.11  Aligned_cols=29  Identities=10%  Similarity=0.050  Sum_probs=22.5

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~   29 (246)
                      +|++|.+|+.+++.+.+. +.++.++....
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~   36 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRP   36 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            488899999999988875 57877755443

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.68  E-value=0.041  Score=42.71  Aligned_cols=63  Identities=17%  Similarity=0.077  Sum_probs=51.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |+|-+|+.++-++.+.|.+|++++|-.+-......             -.-+..|+.|.+.+...++..++|.|+-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            68999999999999999999999998766322221             2234579999999999999889999984

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.62  E-value=0.02  Score=49.32  Aligned_cols=68  Identities=12%  Similarity=0.165  Sum_probs=52.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+++++.|.++|++|.++++++++... ..          ..+...+.+|.+|++.++++-- .++|.++-+.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~~----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDE-LR----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence            56899999999999999999999988766322 11          2578999999999988876442 378887766543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.58  E-value=0.019  Score=46.23  Aligned_cols=94  Identities=15%  Similarity=0.111  Sum_probs=51.0

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEE-EccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|..+++.|.++ +.++..+ +++.+. .+.+...        .+.+... ..++.+. +..++++  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~~--------~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSEV--------HPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHHh--------CccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            599999999999999987 4677755 443321 1111100        0111110 1112111 1223344  799999


Q ss_pred             ecCCCCccchHHHHHhC-CCCceEEEEeecce
Q 025908           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~v  108 (246)
                      .+.+..  ....++..+ +..+++|-+|+..-
T Consensus        74 ~alP~~--~s~~~~~~~~~~G~~VIDlS~~fR  103 (346)
T TIGR01850        74 LALPHG--VSAELAPELLAAGVKVIDLSADFR  103 (346)
T ss_pred             ECCCch--HHHHHHHHHHhCCCEEEeCChhhh
Confidence            888643  334444443 33478888887554

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.58  E-value=0.017  Score=39.07  Aligned_cols=86  Identities=15%  Similarity=0.125  Sum_probs=45.9

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEE-ecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLF-TRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l-~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      .|++|.+|+.+++.+.+ .++++.+. +|+++... +....    -......++.+       .++++++++  .+|++|
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~----~~~~~~~~~~v-------~~~l~~~~~--~~DVvI   72 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE----LAGIGPLGVPV-------TDDLEELLE--EADVVI   72 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH----HCTSST-SSBE-------BS-HHHHTT--H-SEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh----hhCcCCccccc-------chhHHHhcc--cCCEEE
Confidence            48899999999999999 56775544 45442211 11000    00000011111       256677777  599999


Q ss_pred             ecCCCCccchHHHHHhCC-CCceEE
Q 025908           78 DINGREADEVEPILDALP-NLEQFI  101 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~-~~~~~i  101 (246)
                      ++.  ....+...++.+. ....+|
T Consensus        73 DfT--~p~~~~~~~~~~~~~g~~~V   95 (124)
T PF01113_consen   73 DFT--NPDAVYDNLEYALKHGVPLV   95 (124)
T ss_dssp             EES---HHHHHHHHHHHHHHT-EEE
T ss_pred             EcC--ChHHhHHHHHHHHhCCCCEE
Confidence            998  4455555666554 333444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.51  E-value=0.025  Score=45.43  Aligned_cols=88  Identities=14%  Similarity=0.069  Sum_probs=49.0

Q ss_pred             CCccccchHHHHHHHHHCCCe---EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|..|++.|.+++|.   +..+....+. .+.+..          .+......++. .+    .++  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~----------~~~~~~v~~~~-~~----~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTF----------EGRDYTVEELT-ED----SFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeee----------cCceeEEEeCC-HH----HHc--CCCEEE
Confidence            599999999999999997763   4444332211 111110          12222222332 22    344  899999


Q ss_pred             ecCCCCccchHHHHHhC-CCCceEEEEeecce
Q 025908           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~v  108 (246)
                      .+++..  ....+...+ +...++|-.|+..-
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR  104 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFR  104 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhh
Confidence            888654  333444333 33347787776543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.43  E-value=0.099  Score=41.50  Aligned_cols=80  Identities=15%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..|.....                .++..+    ...+++.++++  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999998765431                121111    12456777887  88998877655


Q ss_pred             CccchHHHH-----HhCCCCceEEEEee
Q 025908           83 EADEVEPIL-----DALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~~~~~~~l~-----~a~~~~~~~i~~Ss  105 (246)
                      +. .++.++     +.++...-||.++=
T Consensus       201 t~-~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        201 TP-ETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CH-HHHHHhHHHHHhcCCCCcEEEECCC
Confidence            42 334443     34443345665553

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.25  E-value=0.03  Score=44.57  Aligned_cols=143  Identities=13%  Similarity=0.143  Sum_probs=74.2

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCCCc--cccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   71 (246)
                      +|++|.+|..++..|...+.       ++..+++....  ......+...... ....++.+. .  .+    .+.++  
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~-~--~~----~~~~~--   77 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF-PLLAEIVIT-D--DP----NVAFK--   77 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccc-cccCceEEe-c--Cc----HHHhC--
Confidence            58889999999999998763       78888885433  1111111100000 001122222 1  12    34555  


Q ss_pred             CccEEEecCCCCccc--------------hHHHHHhCC--C--CceEEEEeecc---eeccCCCCCCCCCCC-CCCCCcc
Q 025908           72 GFDVVYDINGREADE--------------VEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETDT-VDPKSRH  129 (246)
Q Consensus        72 ~~d~vi~~~~~~~~~--------------~~~l~~a~~--~--~~~~i~~Ss~~---v~~~~~~~~~~e~~~-~~~~~~~  129 (246)
                      ++|+||.++|.....              .+.+...+.  .  ...+|.+|-..   +|-      .....+ ..+..-+
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~p~~~Vi  151 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDIPPDNFT  151 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCCChHheE
Confidence            999999999874321              222333332  2  22445444211   000      001111 1122222


Q ss_pred             -ccHHHHHHHH----HhcCCceEEeecceeeCCCC
Q 025908          130 -KGKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (246)
Q Consensus       130 -~~k~~~e~~~----~~~~~~~~ilR~~~i~g~~~  159 (246)
                       .++...+++.    +..+++...+|...+||++.
T Consensus       152 G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         152 AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence             4666666654    45788888999888999863

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.18  E-value=0.042  Score=43.23  Aligned_cols=83  Identities=18%  Similarity=0.223  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      .|.+|+.+++.|...|.+|++..|++.... ...          ..+...+     ..+++.+.+.  ++|+||+++...
T Consensus       160 ~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~-~~~----------~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~~  221 (296)
T PRK08306        160 FGRTGMTLARTLKALGANVTVGARKSAHLA-RIT----------EMGLSPF-----HLSELAEEVG--KIDIIFNTIPAL  221 (296)
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH----------HcCCeee-----cHHHHHHHhC--CCCEEEECCChh
Confidence            588999999999999999999999865421 110          1233322     2345667776  899999987532


Q ss_pred             ccchHHHHHhCCCCceEEEEee
Q 025908           84 ADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        84 ~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      . -...+++.++....+|-+++
T Consensus       222 ~-i~~~~l~~~~~g~vIIDla~  242 (296)
T PRK08306        222 V-LTKEVLSKMPPEALIIDLAS  242 (296)
T ss_pred             h-hhHHHHHcCCCCcEEEEEcc
Confidence            1 23445555554345555553

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.14  E-value=0.036  Score=50.67  Aligned_cols=69  Identities=13%  Similarity=-0.008  Sum_probs=50.0

Q ss_pred             ccccchHHHHHHHHHCC-Ce-------------EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh
Q 025908            3 GTRFIGVFLSRLLVKEG-HQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~-------------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   68 (246)
                      |+|++|+.+++.|.+.+ .+             |.+.+++.....+...         ..++++.+..|+.|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~---------~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVE---------GIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHH---------hcCCCceEEeecCCHHHHHHhh
Confidence            35999999999998763 33             6666665444211111         1246788999999999999998


Q ss_pred             hcCCccEEEecCCC
Q 025908           69 SAKGFDVVYDINGR   82 (246)
Q Consensus        69 ~~~~~d~vi~~~~~   82 (246)
                      +  ++|+||.+...
T Consensus       647 ~--~~DaVIsalP~  658 (1042)
T PLN02819        647 S--QVDVVISLLPA  658 (1042)
T ss_pred             c--CCCEEEECCCc
Confidence            8  79999998765

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.03  E-value=0.022  Score=41.81  Aligned_cols=31  Identities=32%  Similarity=0.344  Sum_probs=27.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +||+|.+|..|++.|.+.||+|.+-.|+..+
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            4899999999999999999999999777655

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=94.99  E-value=0.1  Score=42.66  Aligned_cols=65  Identities=15%  Similarity=0.036  Sum_probs=49.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+|.+|..+++.+.+.|++|++++.++......+             .-..+..|..|.+.+.++.++.++|.|+...
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh-------------CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            3689999999999999999999998765522111             1234567888999999888877899998643

This enzyme is an alternative to PurN (TIGR00639)

>PRK04148 hypothetical protein; Provisional

Probab=94.98  E-value=0.033  Score=37.97  Aligned_cols=75  Identities=13%  Similarity=0.142  Sum_probs=52.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH-HHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.| .|.+++..|.+.|++|++++.++.......           ...+..+.+|+.+++ ++.+     ++|.|+.+-.
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~~~y~-----~a~liysirp   86 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNLEIYK-----NAKLIYSIRP   86 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCHHHHh-----cCCEEEEeCC
Confidence            456 788899999999999999999877532111           257889999998764 2332     7888876543


Q ss_pred             CCccchHHHHHhCC
Q 025908           82 READEVEPILDALP   95 (246)
Q Consensus        82 ~~~~~~~~l~~a~~   95 (246)
                       ..+-...+++.++
T Consensus        87 -p~el~~~~~~la~   99 (134)
T PRK04148         87 -PRDLQPFILELAK   99 (134)
T ss_pred             -CHHHHHHHHHHHH
Confidence             3344556666665

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.91  E-value=0.074  Score=42.96  Aligned_cols=31  Identities=23%  Similarity=0.401  Sum_probs=25.4

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~   31 (246)
                      +||||++|+.+++.|.+++. ++..+.++.+.
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            59999999999999998764 88888565544

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=94.87  E-value=0.011  Score=40.60  Aligned_cols=67  Identities=18%  Similarity=0.221  Sum_probs=43.2

Q ss_pred             ccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+|..|+.++..|.+.|.+ |+++.|+..+......        .+ ...+..+  ++.+   +.+.+.  ++|+||++.
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~--------~~~~~~~~~~--~~~~---~~~~~~--~~DivI~aT   83 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALAE--------EFGGVNIEAI--PLED---LEEALQ--EADIVINAT   83 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH--------HHTGCSEEEE--EGGG---HCHHHH--TESEEEE-S
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH--------HcCcccccee--eHHH---HHHHHh--hCCeEEEec
Confidence            3588999999999999965 9999998766321111        00 1233333  3333   335566  899999998


Q ss_pred             CCCc
Q 025908           81 GREA   84 (246)
Q Consensus        81 ~~~~   84 (246)
                      +...
T Consensus        84 ~~~~   87 (135)
T PF01488_consen   84 PSGM   87 (135)
T ss_dssp             STTS
T ss_pred             CCCC
Confidence            7653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.86  E-value=0.12  Score=35.79  Aligned_cols=102  Identities=17%  Similarity=0.188  Sum_probs=58.8

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCcccc----CCC--CCC--------chhhhhhcCceEE--EEccCCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----QLP--GES--------DQEFAEFSSKILH--LKGDRKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~----~~~--~~~--------~~~~~~~~~~v~~--~~~D~~~~~~~~   65 (246)
                      |.|-+|.++++.|...|. ++.+++.+.-....    .+.  ...        .....+..+.+++  +..++.+ +...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~-~~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE-DNLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh-hhHH
Confidence            458999999999999996 68888766433110    010  000        0122233344444  3334433 2335


Q ss_pred             HhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecce
Q 025908           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v  108 (246)
                      +.++  ++|+||.+... ......+.++|+ ....++..++.+.
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~  125 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGL  125 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence            6666  89999988765 333444566676 4567777666543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.81  E-value=0.032  Score=40.37  Aligned_cols=85  Identities=16%  Similarity=0.097  Sum_probs=52.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|..-|.+|++.+|........           ...++.        ..+++++++  .+|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-----------~~~~~~--------~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-----------DEFGVE--------YVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-----------HHTTEE--------ESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhc-----------ccccce--------eeehhhhcc--hhhhhhhhhcc
Confidence            569999999999999999999999987652100           011121        234556776  78999877664


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....++.++....||.++-..+
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~  131 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARGEL  131 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred             ccccceeeeeeeeeccccceEEEeccchhh
Confidence            322    13445666765557776664443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.81  E-value=0.12  Score=35.07  Aligned_cols=26  Identities=31%  Similarity=0.464  Sum_probs=22.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (246)
                      |.|.+|.+|++.|.+.||+|..+...
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~sr   42 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSR   42 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence            45999999999999999999887543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.79  E-value=0.36  Score=38.83  Aligned_cols=103  Identities=20%  Similarity=0.297  Sum_probs=62.8

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCC-------C----------chhhhhhcCc--eEEEEccCCCHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE-------S----------DQEFAEFSSK--ILHLKGDRKDYD   62 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~-------~----------~~~~~~~~~~--v~~~~~D~~~~~   62 (246)
                      |.|.+|..+++.|...|. ++.+++++.-.. +++...       .          .....+..+.  ++.+..+++ .+
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~-sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~  108 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEW-SNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AE  108 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCH-HHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HH
Confidence            459999999999999997 899888865331 111100       0          0122223344  444455554 45


Q ss_pred             HHHHhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceec
Q 025908           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        63 ~~~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .+.++++  ++|+||.+... ...-..+-++|. ..+.+|+.+..+.+|
T Consensus       109 ~~~~~~~--~~DlVid~~Dn-~~~r~~ln~~~~~~~iP~i~~~~~g~~G  154 (339)
T PRK07688        109 ELEELVT--GVDLIIDATDN-FETRFIVNDAAQKYGIPWIYGACVGSYG  154 (339)
T ss_pred             HHHHHHc--CCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence            6677787  89999988653 222223445555 456788888777665

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=94.72  E-value=0.27  Score=37.61  Aligned_cols=79  Identities=19%  Similarity=0.069  Sum_probs=53.5

Q ss_pred             chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCCcc-
Q 025908            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREAD-   85 (246)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~~~-   85 (246)
                      =|+.|++.|.+.|+ |.+-+-..... .....        ......+..+-+.+.+.+.+++++.+++.||+++.+-.. 
T Consensus        11 E~r~la~~L~~~g~-v~~sv~t~~g~-~~~~~--------~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~   80 (249)
T PF02571_consen   11 EGRKLAERLAEAGY-VIVSVATSYGG-ELLKP--------ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAE   80 (249)
T ss_pred             HHHHHHHHHHhcCC-EEEEEEhhhhH-hhhcc--------ccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence            37899999999998 55443332221 11110        025678888998899999999998999999999876432 


Q ss_pred             chHHHHHhCC
Q 025908           86 EVEPILDALP   95 (246)
Q Consensus        86 ~~~~l~~a~~   95 (246)
                      -.+++.++|+
T Consensus        81 is~na~~a~~   90 (249)
T PF02571_consen   81 ISQNAIEACR   90 (249)
T ss_pred             HHHHHHHHHh
Confidence            2345555554

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=94.70  E-value=0.3  Score=36.14  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=61.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------C--------CchhhhhhcCceEEEE--ccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E--------SDQEFAEFSSKILHLK--GDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------~--------~~~~~~~~~~~v~~~~--~D~~~~~~~   64 (246)
                      |.|-+|..+++.|...|. ++++++++.-.. +++..       .        ...+..+..+.+++..  ..+ +.+.+
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~  105 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDL-SNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENL  105 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcc-cchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHH
Confidence            568999999999999995 888888764321 11110       0        0012223334444433  333 34567


Q ss_pred             HHhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceec
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .++++  ++|+||.+.... ..-..+-++|. ..+.+|+.+..+.+|
T Consensus       106 ~~~~~--~~D~Vi~~~d~~-~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356       106 ELLIN--NVDLVLDCTDNF-ATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             HHHHh--CCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            77887  899999886432 22223445555 556788887665554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.69  E-value=0.051  Score=45.51  Aligned_cols=69  Identities=23%  Similarity=0.282  Sum_probs=46.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++ +|..+++.|++.|++|++.++.........    ..++.  ..++.++.+|..+     +.+.  ++|+||+++
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~   76 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP   76 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence            47766 999999999999999999988653211000    00011  2367788888765     2233  799999988


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.54  E-value=0.45  Score=38.28  Aligned_cols=102  Identities=19%  Similarity=0.288  Sum_probs=62.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-----C--C----------chhhhhhcCc--eEEEEccCCCHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-----E--S----------DQEFAEFSSK--ILHLKGDRKDYD   62 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-----~--~----------~~~~~~~~~~--v~~~~~D~~~~~   62 (246)
                      |.|-+|.++++.|.+.|. ++++++++.-.. +++..     .  .          ..+..+..+.  ++.+..|++ .+
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~-sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~  108 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEW-SNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VE  108 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccc-cccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HH
Confidence            457899999999999996 788888875331 11110     0  0          0122223344  444555664 45


Q ss_pred             HHHHhhhcCCccEEEecCCCCccchHHHH-HhCC-CCceEEEEeecceec
Q 025908           63 FVKSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        63 ~~~~~~~~~~~d~vi~~~~~~~~~~~~l~-~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .+.++++  ++|+||.+...  ..++.++ ++|. ....+|+.+..+.+|
T Consensus       109 ~~~~~~~--~~DlVid~~D~--~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        109 ELEELVK--EVDLIIDATDN--FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHHhc--CCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            6778887  89999998743  2333334 4454 456788887766554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.50  E-value=0.086  Score=42.30  Aligned_cols=91  Identities=15%  Similarity=0.187  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC---C-HHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---D-YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~---~-~~~~~~~~~~~~~d~v   76 (246)
                      +||+|.+|..+++.+...|.+|++++++..+... +.+         ..++..+ .|..   + .+.+.+... .++|++
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~-~~~---------~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDL-LKN---------KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHH---------hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            4889999999999998899999998887665211 110         0122211 1221   1 122333332 479999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++.+.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            999874  345566677765557776664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.47  E-value=0.18  Score=41.10  Aligned_cols=90  Identities=10%  Similarity=0.066  Sum_probs=58.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|-+|...++.|...|.+|.++.|++.+... +..         ..+. .+..+..+.+.+.+.+.  ++|+||+++..
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~-l~~---------~~g~-~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQ-LDA---------EFGG-RIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HHH---------hcCc-eeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            45899999999999999999999987654211 100         0111 12234556778888887  89999998743


Q ss_pred             C---cc--chHHHHHhCCCCceEEEEee
Q 025908           83 E---AD--EVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~---~~--~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .   ..  -....++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            2   11  24556666664456776663

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.43  E-value=0.051  Score=47.28  Aligned_cols=68  Identities=13%  Similarity=0.233  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.+|+.+++.|.++|+++.+++++++.... ..          ..+..++.+|.++++.++++=- .+++.++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d  474 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVNL-MR----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE  474 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence            56889999999999999999999998776322 11          2578899999999988876532 378888876654

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=94.36  E-value=0.16  Score=41.47  Aligned_cols=60  Identities=18%  Similarity=0.166  Sum_probs=46.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |+|.+|+.++..+.+.|++|++++.+++.....+             .-..+.+|+.|.+.+.++.+  .+|+|.
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------------ad~~~~~~~~D~~~l~~~a~--~~dvit   68 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------------ADEVIVADYDDVAALRELAE--QCDVIT   68 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------------CceEEecCCCCHHHHHHHHh--cCCEEE
Confidence            3489999999999999999999988765522111             22456678899999999887  888875

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=94.30  E-value=0.06  Score=43.06  Aligned_cols=88  Identities=16%  Similarity=0.126  Sum_probs=47.2

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|..+++.|.++.|   ++..+....+. -+.+.-      .  ...+.+-  ++   +.  ..++  ++|++|
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~~------~--~~~~~v~--~~---~~--~~~~--~~Dvvf   71 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLRF------G--GKSVTVQ--DA---AE--FDWS--QAQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEEE------C--CcceEEE--eC---ch--hhcc--CCCEEE
Confidence            59999999999999998543   66666554322 111110      0  0011111  22   11  1224  789999


Q ss_pred             ecCCCCccchHHHHHhC-CCCceEEEEeecce
Q 025908           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~v  108 (246)
                      .+++..  ....+...+ +...++|-.|+..-
T Consensus        72 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR  101 (336)
T PRK08040         72 FVAGRE--ASAAYAEEATNAGCLVIDSSGLFA  101 (336)
T ss_pred             ECCCHH--HHHHHHHHHHHCCCEEEECChHhc
Confidence            888654  233444433 23346777776443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.25  E-value=0.79  Score=31.37  Aligned_cols=104  Identities=16%  Similarity=0.201  Sum_probs=62.4

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccC----CCC--CCc--------hhhhhhcCce--EEEEccCCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQ----LPG--ESD--------QEFAEFSSKI--LHLKGDRKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~----~~~--~~~--------~~~~~~~~~v--~~~~~D~~~~~~~~   65 (246)
                      |.|-+|..+++.|...|. ++++++.+.-.....    +..  ...        ....+..+.+  +.+..++ +.+...
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            568999999999999996 788888765332111    100  000        1222333444  4444555 456777


Q ss_pred             HhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceec
Q 025908           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      ++++  ++|+||.+... ......+.+.|+ ..+.+|+.++.+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  99999988654 222334555566 556888887765544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.17  E-value=0.17  Score=40.36  Aligned_cols=93  Identities=14%  Similarity=0.222  Sum_probs=56.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccC-CCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDR-KDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~-~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +||+|.+|..+++.+...|.+|++++++.++.. .+.          ..++. ++..+- .+...........++|++++
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~-~~~----------~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d  213 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVA-YLK----------KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFD  213 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HcCCCEEEeccccccHHHHHHHhCCCCeEEEEE
Confidence            488999999999998889999999988765521 111          12222 221111 12222222222247999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +.|..  .....++.++...+++.++..
T Consensus       214 ~~G~~--~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       214 NVGGE--FSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             CCCHH--HHHHHHHHhCcCcEEEEecch
Confidence            98742  345667777755688876643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.13  E-value=0.17  Score=41.85  Aligned_cols=81  Identities=11%  Similarity=0.018  Sum_probs=50.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..+++.+.....           ..++.+.     +   +.++++  ++|+||.+.+.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            4589999999999999999999988876632111           1233321     2   345565  89999988764


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ...-....++.++....++.++
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG  299 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIG  299 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcC
Confidence            2211223445555444555555

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.12  E-value=0.041  Score=41.27  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=27.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +||+|.+|+.+++.|.+.|++|.+..|++++
T Consensus         6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            3789999999999999999999999987655

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.11  E-value=0.63  Score=34.27  Aligned_cols=102  Identities=17%  Similarity=0.171  Sum_probs=58.1

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------CC--------chhhhhhcCceEE--EEccCCCHHH
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ES--------DQEFAEFSSKILH--LKGDRKDYDF   63 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------~~--------~~~~~~~~~~v~~--~~~D~~~~~~   63 (246)
                      |+ |-+|.++++.|...|. ++++++.+.-.. +.+..       ..        .....+..+.+++  ....+.  +.
T Consensus        28 G~-gglG~evak~La~~GVg~i~lvD~d~ve~-snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~  103 (197)
T cd01492          28 GL-KGLGAEIAKNLVLSGIGSLTILDDRTVTE-EDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EK  103 (197)
T ss_pred             cC-CHHHHHHHHHHHHcCCCEEEEEECCcccH-hhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--cc
Confidence            44 5599999999999995 688887764331 11110       00        0122234444443  333343  22


Q ss_pred             HHHhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceec
Q 025908           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        64 ~~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      ..+.++  ++|+||.+.. +......+-++|+ ....||+.++.+.+|
T Consensus       104 ~~~~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G  148 (197)
T cd01492         104 PEEFFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFG  148 (197)
T ss_pred             HHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence            345566  8999997754 2333334445566 445788888766655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.06  E-value=0.25  Score=39.08  Aligned_cols=81  Identities=19%  Similarity=0.106  Sum_probs=51.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+++++.|...|.+|++..|+...                 .++...      ..+++++++  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            56899999999888789999999886432                 111100      124566776  88988877654


Q ss_pred             Cccc----hHHHHHhCCCCceEEEEeecce
Q 025908           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +...    ....++.++....||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            3221    2344555664457777776554

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.05  E-value=0.13  Score=40.42  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=45.8

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      .||||+.|..|++.|..++ .++..++.+...                         +..+   ..++++  ++|++|.+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~---~~~~~~--~~D~vFla   56 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAE---RAKLLN--AADVAILC   56 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCC---HhHhhc--CCCEEEEC
Confidence            4999999999999999986 366665433211                         1112   223444  78998887


Q ss_pred             CCCCccchHHHHHhC-CCCceEEEEeecc
Q 025908           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~  107 (246)
                      ....  ....++..+ ....++|-+|+..
T Consensus        57 lp~~--~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        57 LPDD--AAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             CCHH--HHHHHHHHHHhCCCEEEECChHH
Confidence            7543  333444433 2334688777643

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.04  E-value=0.092  Score=35.29  Aligned_cols=95  Identities=16%  Similarity=0.108  Sum_probs=49.8

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEE-EccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..+++.|.+. ++++.++..+.....+....        ..+.+..+ ..++ +.+.+.  ..  ++|+||.
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSE--------AGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHH--------HCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999995 78888884332211111110        01122111 1122 222222  12  8899988


Q ss_pred             cCCCCccch--HHHHHhCCCCceEEEEeecce
Q 025908           79 INGREADEV--EPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        79 ~~~~~~~~~--~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +.+......  ..+...+...+.+|-+|+..-
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~  103 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFR  103 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCcccc
Confidence            876542211  123333444567777776543

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.95  E-value=0.087  Score=41.56  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|.+..|++.+
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~   35 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDA   35 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46899999999999999999999998765

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=93.94  E-value=0.2  Score=40.04  Aligned_cols=60  Identities=15%  Similarity=0.168  Sum_probs=47.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |.|.+|+-++.+..+.|++|+++.-.++.......             -..+..+.+|++.+.++.+  .+|+|-
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT   67 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVIT   67 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEE
Confidence            56999999999999999999999987777433322             2345667778999999988  888885

>PLN02494 adenosylhomocysteinase

Probab=93.92  E-value=0.27  Score=41.03  Aligned_cols=82  Identities=13%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.+...|.+|+++.+++.+.....           ..++.++     +   +.++++  ..|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv-----~---leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL-----T---LEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec-----c---HHHHHh--hCCEEEECCCC
Confidence            5689999999999999999999888765522111           1233322     1   344565  78999987664


Q ss_pred             CccchHHHHHhCCCCceEEEEee
Q 025908           83 EADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ...-....++.++....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            43323556666775557776664

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.91  E-value=0.032  Score=39.20  Aligned_cols=68  Identities=12%  Similarity=0.073  Sum_probs=41.9

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +|+ |.+|..+++.|.+.| ++|++..|+..+..+...          ..+...+..+..+.+   ++++  ++|+||.+
T Consensus        25 iG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~---~~~~--~~Dvvi~~   88 (155)
T cd01065          25 LGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE----------RFGELGIAIAYLDLE---ELLA--EADLIINT   88 (155)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH----------HHhhcccceeecchh---hccc--cCCEEEeC
Confidence            355 899999999999996 789999987655321111          001110112333333   3354  89999999


Q ss_pred             CCCCc
Q 025908           80 NGREA   84 (246)
Q Consensus        80 ~~~~~   84 (246)
                      .....
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            87654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=93.90  E-value=0.1  Score=43.27  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|++|..++..|.+.|++|+++.+++.+.
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            579999999999999999999999987764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.86  E-value=0.21  Score=35.98  Aligned_cols=103  Identities=14%  Similarity=0.184  Sum_probs=58.2

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCc---cccCC-C-CCC--------chhhhhhcCceEE--EEccCCCHHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQL-P-GES--------DQEFAEFSSKILH--LKGDRKDYDFVKS   66 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~---~~~~~-~-~~~--------~~~~~~~~~~v~~--~~~D~~~~~~~~~   66 (246)
                      |.|-+|..+++.|.+.|. ++++++.+.-.   ..... . ...        ..+..+..+.+++  +...++ .+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-ENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-hhhHHH
Confidence            468999999999999996 68888887522   11000 0 000        1122233344444  334443 456677


Q ss_pred             hhhcCCccEEEecCCCCccchHHHHHhCC-C-CceEEEEeeccee
Q 025908           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVY  109 (246)
Q Consensus        67 ~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~-~~~~i~~Ss~~v~  109 (246)
                      +++  ++|+||.+... ...-..+.+.+. . ...||+.+...-|
T Consensus        85 ~l~--~~DlVi~~~d~-~~~r~~i~~~~~~~~~ip~i~~~~~~~~  126 (174)
T cd01487          85 LFG--DCDIVVEAFDN-AETKAMLAESLLGNKNKPVVCASGMAGF  126 (174)
T ss_pred             Hhc--CCCEEEECCCC-HHHHHHHHHHHHHHCCCCEEEEehhhcc
Confidence            787  89999998432 222233455544 3 5667766544333

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.85  E-value=0.21  Score=41.15  Aligned_cols=81  Identities=10%  Similarity=0.016  Sum_probs=53.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|..+++.+...|.+|+++.+++.+.....           ..++..+     +.   .+++.  ++|+||.++|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~-----~~---~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVM-----TM---EEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEc-----cH---HHHHc--CCCEEEECCCC
Confidence            5689999999999999999999888766632111           1344332     11   24555  78999998875


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ...-....++.++....++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            4322233466666555777666

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.80  E-value=0.28  Score=41.02  Aligned_cols=81  Identities=11%  Similarity=-0.020  Sum_probs=51.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.+|+.+++.|...|.+|++..+++.+.....           ..+++..        .+.++++  ..|+|+.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            4588999999999999999999888765521111           1233322        2445666  89999988764


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ...-....++.++....++.++
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcC
Confidence            2222235666666445666555

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=93.72  E-value=0.58  Score=35.36  Aligned_cols=103  Identities=16%  Similarity=0.159  Sum_probs=60.1

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------CC--------chhhhhhcCc--eEEEEccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ES--------DQEFAEFSSK--ILHLKGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------~~--------~~~~~~~~~~--v~~~~~D~~~~~~~   64 (246)
                      |.|-+|.++++.|...|. ++++++.+.-.. +.+..       ..        ..+..+..+.  ++.+..++ +.+.+
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~  105 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVEL-SNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENA  105 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcC-cccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHH
Confidence            568999999999999995 677776654221 11110       00        0122233343  34444444 35667


Q ss_pred             HHhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEeecceec
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .++++  ++|+||.+.... ..-..+-++|. ....+|+.+..+.+|
T Consensus       106 ~~~~~--~~DvVi~~~d~~-~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         106 EELIA--GYDLVLDCTDNF-ATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHHh--CCCEEEEcCCCH-HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            77787  899999987633 22233445555 556788877655444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=93.71  E-value=0.98  Score=34.45  Aligned_cols=103  Identities=15%  Similarity=0.124  Sum_probs=61.9

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------CC--------chhhhhhcCceEEEEccC-CCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------ES--------DQEFAEFSSKILHLKGDR-KDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------~~--------~~~~~~~~~~v~~~~~D~-~~~~~~~   65 (246)
                      |.|-+|..+++.|...|. ++++++.+.-.. +++..       ..        ..+..+..+.+++...+- .+.+.+.
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~  109 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSL-SNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELA  109 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccc-cCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHH
Confidence            568999999999999994 777777765442 11111       00        012223445555544432 2445677


Q ss_pred             HhhhcCCccEEEecCCCCccchHH-HHHhCC-CCceEEEEeecceec
Q 025908           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~-l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      ++++  ++|+||.+....  .++. +-++|. ....+|+.++.+.+|
T Consensus       110 ~~~~--~~DlVvd~~D~~--~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       110 ALIA--EHDIVVDCTDNV--EVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             HHhh--cCCEEEEcCCCH--HHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            7887  899999887542  2333 345555 556788776655444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.68  E-value=0.25  Score=39.54  Aligned_cols=93  Identities=19%  Similarity=0.219  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|-+|...++.+...|+.+++.+.+..+.. .+.          ..+...+. |..+   .+.+.++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~----------~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK----------ELGADHVI-NYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH----------hcCCCEEE-cCCcccHHHHHHHHcCCCCceEEE
Confidence            589999999999999999977777776665532 111          12221111 1222   23444555445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      +..|..  .....+++++.--+++.+...+
T Consensus       217 D~vG~~--~~~~~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         217 DTVGGD--TFAASLAALAPGGRLVSIGALS  244 (326)
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEecCC
Confidence            998753  3334566666336777776543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.66  E-value=0.29  Score=38.97  Aligned_cols=91  Identities=16%  Similarity=0.250  Sum_probs=56.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|-+|..+++.+...|.+|++++++..+.. .+.          ..++..+ .|..+   .+.+.+... .++|+|+
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~-~l~----------~~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA-WLK----------ELGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HcCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            488999999999999999999999988765521 111          0122211 12222   223333332 4799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ++.+.  ......++.++...+++.++..
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcch
Confidence            98874  3445566666644577777643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=93.61  E-value=0.18  Score=40.12  Aligned_cols=88  Identities=19%  Similarity=0.264  Sum_probs=54.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCCHHHHHHhhh-cCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLS-AKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~-~~~~d~vi~   78 (246)
                      +||+|.+|..+++.+...|.+|+++++++.+. +.+..          .+. .++  +..+   +.+.+. ..++|.+++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~----------~~~~~~~--~~~~---~~~~~~~~~~~d~v~~  232 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILKE----------LGADYVI--DGSK---FSEDVKKLGGADVVIE  232 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHH----------cCCcEEE--ecHH---HHHHHHhccCCCEEEE
Confidence            48999999999999999999999998876542 11110          111 111  2111   222222 127999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +++..  .....++.+....+++.++..
T Consensus       233 ~~g~~--~~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         233 LVGSP--TIEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CCChH--HHHHHHHHhhcCCEEEEEcCC
Confidence            98753  244555555544577877643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.57  E-value=0.11  Score=41.75  Aligned_cols=88  Identities=18%  Similarity=0.197  Sum_probs=47.9

Q ss_pred             CCccccchHHHHHHHHHC-CCe---EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +||||++|+.+++.|.++ ..+   +..+....+. -+.+..          .+-....-++ +++.    ++  ++|++
T Consensus        11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~~----------~~~~l~v~~~-~~~~----~~--~~Div   72 (347)
T PRK06728         11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQF----------KGREIIIQEA-KINS----FE--GVDIA   72 (347)
T ss_pred             EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCeee----------CCcceEEEeC-CHHH----hc--CCCEE
Confidence            599999999999999964 455   5555544322 111110          1111222222 3333    34  89999


Q ss_pred             EecCCCCccchHHHHHhC-CCCceEEEEeecce
Q 025908           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~v  108 (246)
                      |.+++..  ....+...+ +....+|-.|+..-
T Consensus        73 f~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR  103 (347)
T PRK06728         73 FFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYR  103 (347)
T ss_pred             EECCChH--HHHHHHHHHHHCCCEEEECchhhc
Confidence            9888654  333444433 23346776775443

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.54  E-value=0.25  Score=41.46  Aligned_cols=64  Identities=13%  Similarity=0.049  Sum_probs=45.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-CCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~~~   81 (246)
                      .||.+|.+|++.+..+|.+|+.++-..+- .  .           ..+++++..+  ..+++.+++.+ ...|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~-----------p~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--D-----------PQGVKVIHVE--SARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--C-----------CCCceEEEec--CHHHHHHHHHhhCCCCEEEEecc
Confidence            58999999999999999999998743221 0  1           2566666544  45555555532 25799999988


Q ss_pred             C
Q 025908           82 R   82 (246)
Q Consensus        82 ~   82 (246)
                      .
T Consensus       344 V  344 (475)
T PRK13982        344 V  344 (475)
T ss_pred             c
Confidence            6

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.51  E-value=0.2  Score=40.26  Aligned_cols=83  Identities=18%  Similarity=0.114  Sum_probs=53.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|.+.+|......  ..          ..++.        ..++.++++  .+|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~~~~--------~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EK----------ELGAE--------YRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HH----------HcCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence            5699999999999999999999988653310  00          01111        124556676  88999877654


Q ss_pred             CccchH-----HHHHhCCCCceEEEEeecce
Q 025908           83 EADEVE-----PILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~~~~-----~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +. .+.     ..++.++....||.+|...+
T Consensus       215 t~-~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 TK-ETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             Ch-HHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            32 222     34555665567777776554

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.45  E-value=0.16  Score=40.12  Aligned_cols=75  Identities=15%  Similarity=0.124  Sum_probs=45.4

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +||||++|..|++.|.++.+ ++..+..+...                         ++.+.   ...++  ++|+||.+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~~---~~~~~--~~DvvFla   57 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAAR---RELLN--AADVAILC   57 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccCc---hhhhc--CCCEEEEC
Confidence            59999999999999999873 55555543222                         11111   12344  78999887


Q ss_pred             CCCCccchHHHHHhC-CCCceEEEEeecc
Q 025908           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~  107 (246)
                      ....  ....+...+ +...++|-+|+..
T Consensus        58 lp~~--~s~~~~~~~~~~g~~VIDlSadf   84 (313)
T PRK11863         58 LPDD--AAREAVALIDNPATRVIDASTAH   84 (313)
T ss_pred             CCHH--HHHHHHHHHHhCCCEEEECChhh
Confidence            7543  233344433 3334688787644

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=93.29  E-value=0.26  Score=39.28  Aligned_cols=93  Identities=18%  Similarity=0.186  Sum_probs=57.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHH---HHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~---~~~~~~~~~~d~vi   77 (246)
                      +|++|-+|..+++.+...|.+|++++++..+.. .+..          .+... ..|..+.+.   +.......++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE-RAKE----------LGADY-VIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHH----------cCCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence            488899999999999999999999888765421 1110          11111 124333332   33333334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ++++.  ......++.++...+++.+++..
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence            99875  23455666666446788887543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=93.25  E-value=0.2  Score=35.39  Aligned_cols=71  Identities=14%  Similarity=0.087  Sum_probs=45.2

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      =|.+|+.+++.|...|.+|++..+++-+..+.           ..+++++.        .+.+++.  ..|++|.+.|..
T Consensus        31 YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA-----------~~dGf~v~--------~~~~a~~--~adi~vtaTG~~   89 (162)
T PF00670_consen   31 YGKVGKGIARALRGLGARVTVTEIDPIRALQA-----------AMDGFEVM--------TLEEALR--DADIFVTATGNK   89 (162)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH-----------HHTT-EEE---------HHHHTT--T-SEEEE-SSSS
T ss_pred             CCcccHHHHHHHhhCCCEEEEEECChHHHHHh-----------hhcCcEec--------CHHHHHh--hCCEEEECCCCc
Confidence            37899999999999999999999887663322           23566543        2556676  889999888875


Q ss_pred             ccchHHHHHhCC
Q 025908           84 ADEVEPILDALP   95 (246)
Q Consensus        84 ~~~~~~l~~a~~   95 (246)
                      ..-....++.++
T Consensus        90 ~vi~~e~~~~mk  101 (162)
T PF00670_consen   90 DVITGEHFRQMK  101 (162)
T ss_dssp             SSB-HHHHHHS-
T ss_pred             cccCHHHHHHhc
Confidence            444555666676

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK10537 voltage-gated potassium channel; Provisional

Probab=93.21  E-value=0.39  Score=39.44  Aligned_cols=66  Identities=15%  Similarity=0.157  Sum_probs=48.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|.++|+++.++..+...  ...           ..+..++.+|.+|++.++++=- .+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence            45789999999999999999888854211  111           3578899999999988876442 378888866543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=93.19  E-value=0.3  Score=39.01  Aligned_cols=84  Identities=19%  Similarity=0.200  Sum_probs=55.7

Q ss_pred             ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCCc
Q 025908            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (246)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~~   84 (246)
                      |-+|..-++.+...|.+|++++|++++.....           ..+...+... .+++.+..+-+  .+|++|.+++  .
T Consensus       176 GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-----------~lGAd~~i~~-~~~~~~~~~~~--~~d~ii~tv~--~  239 (339)
T COG1064         176 GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-----------KLGADHVINS-SDSDALEAVKE--IADAIIDTVG--P  239 (339)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-----------HhCCcEEEEc-CCchhhHHhHh--hCcEEEECCC--h
Confidence            47888888888778999999999998842111           1233332222 25555554444  4999999998  4


Q ss_pred             cchHHHHHhCCCCceEEEEe
Q 025908           85 DEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        85 ~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ......+++++..-+++.++
T Consensus       240 ~~~~~~l~~l~~~G~~v~vG  259 (339)
T COG1064         240 ATLEPSLKALRRGGTLVLVG  259 (339)
T ss_pred             hhHHHHHHHHhcCCEEEEEC
Confidence            56667778887555777666

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.18  E-value=0.3  Score=40.14  Aligned_cols=82  Identities=7%  Similarity=-0.016  Sum_probs=51.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.+...|.+|+++.+++.+.....           ..++.+.     +.   .++++  +.|+||.+.+.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~-----~l---eeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM-----TM---EEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC-----CH---HHHHh--cCCEEEECCCC
Confidence            5699999999999999999999988876532111           1344332     22   23555  88999987764


Q ss_pred             CccchHHHHHhCCCCceEEEEee
Q 025908           83 EADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ...-....+..++....++.++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            22222234455554456666653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.17  E-value=0.19  Score=41.04  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=26.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~   29 (246)
                      +||.|.+|..+++.|.+.|++|++..|+.
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999864

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.15  E-value=1.3  Score=32.66  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=46.4

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecC---CCccccCC-C-CCCc--------hhhhhhcCc--eEEEEccCCCHHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQL-P-GESD--------QEFAEFSSK--ILHLKGDRKDYDFVKS   66 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~---~~~~~~~~-~-~~~~--------~~~~~~~~~--v~~~~~D~~~~~~~~~   66 (246)
                      |.|.+|..++..|.+.|. ++++++++   .+...... . ....        .......+.  ++.+..+++ .+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~-~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT-EENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC-HhHHHH
Confidence            458899999999999997 69988887   33322111 0 0110        111222333  444445554 466777


Q ss_pred             hhhcCCccEEEecC
Q 025908           67 SLSAKGFDVVYDIN   80 (246)
Q Consensus        67 ~~~~~~~d~vi~~~   80 (246)
                      +++  ++|+||.+.
T Consensus       107 ~~~--~~DlVi~a~  118 (200)
T TIGR02354       107 FFK--DADIVCEAF  118 (200)
T ss_pred             Hhc--CCCEEEECC
Confidence            887  899999983

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=93.12  E-value=0.39  Score=38.11  Aligned_cols=92  Identities=24%  Similarity=0.222  Sum_probs=57.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (246)
                      .|++|.+|..+++.+...|.+|++++++.++.. .+.          ..++..+ .|..+. ..+.......++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQAD-YLK----------SLGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------hcCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            478999999999988889999999988765521 111          1122211 122221 223334433479999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEeec
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      .+.  ......++.++...+++.++..
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            764  3455666666655678877753

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=93.07  E-value=0.29  Score=40.29  Aligned_cols=65  Identities=17%  Similarity=0.039  Sum_probs=48.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+|.+|+.+++.+.+.|++|++++..+......+             .-..+..|..|.+.+.++.++.++|.|+...
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------AHRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------------hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            3578899999999999999999988765421111             1124567888899998888877899998653

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.06  E-value=0.43  Score=37.86  Aligned_cols=92  Identities=18%  Similarity=0.192  Sum_probs=57.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      .|++|.+|..+++.+...|.+|+++++...+... +..          .++. ++..+-.+ .+.+.++....++|+|++
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~-~~~----------~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d  214 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE-LRA----------LGIGPVVSTEQPGWQDKVREAAGGAPISVALD  214 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH-HHh----------cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEE
Confidence            4889999999999999999999999887655211 110          1221 12111111 234445554457999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+..  .....++.++...+|+.++.
T Consensus       215 ~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         215 SVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             CCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            98853  34555666665567887763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.02  E-value=0.47  Score=37.76  Aligned_cols=91  Identities=20%  Similarity=0.219  Sum_probs=56.0

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||+|.+|...++.+...|.+|+++++++.+.. .+.          ..++. ++..+-.+ .+.+.+.....++|+++++
T Consensus       151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~-~~~----------~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~  219 (324)
T cd08291         151 AAASALGRMLVRLCKADGIKVINIVRRKEQVD-LLK----------KIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDA  219 (324)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HcCCcEEEECCCccHHHHHHHHhCCCCCcEEEEC
Confidence            78999999999988888999999888765521 111          11222 22221112 2334444443479999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEee
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .+..  .....++.++...+++.++.
T Consensus       220 ~g~~--~~~~~~~~l~~~G~~v~~g~  243 (324)
T cd08291         220 VGGG--LTGQILLAMPYGSTLYVYGY  243 (324)
T ss_pred             CCcH--HHHHHHHhhCCCCEEEEEEe
Confidence            8743  33445666664457777764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=92.99  E-value=0.14  Score=44.70  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=52.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.+|+.+++.|.++|++++++..++++.... .          ..+..++.+|.++++.++++=- .+++.++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~d  474 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-R----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD  474 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-H----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeCC
Confidence            458899999999999999999999988763221 1          2578899999999988775432 378888877643

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=92.96  E-value=0.42  Score=35.65  Aligned_cols=102  Identities=13%  Similarity=0.176  Sum_probs=58.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCC------CCC--------chhhhhhcCceEE--EEccCCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP------GES--------DQEFAEFSSKILH--LKGDRKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~------~~~--------~~~~~~~~~~v~~--~~~D~~~~~~~~   65 (246)
                      |.|-+|..+++.|.+.|. ++++++.+.-.. +.+.      ...        ..+..+..+.+.+  +...++ .+.+.
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~  112 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEP-SNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIE  112 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEecc-ccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHH
Confidence            468999999999999995 688888763221 1111      000        0122223344443  444443 35566


Q ss_pred             HhhhcCCccEEEecCCCCccchHHHHHhCC-C-CceEEEEeeccee
Q 025908           66 SSLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVY  109 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~-~~~~i~~Ss~~v~  109 (246)
                      +.++  ++|+||.+... ...-..+.+.|. . ...+|+.+...-|
T Consensus       113 ~~~~--~~DvVI~a~D~-~~~r~~l~~~~~~~~~~p~I~~~~~~~~  155 (212)
T PRK08644        113 ELFK--DCDIVVEAFDN-AETKAMLVETVLEHPGKKLVAASGMAGY  155 (212)
T ss_pred             HHHc--CCCEEEECCCC-HHHHHHHHHHHHHhCCCCEEEeehhhcc
Confidence            7787  89999988532 222233455555 4 5677777644433

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=92.92  E-value=0.12  Score=40.55  Aligned_cols=29  Identities=31%  Similarity=0.335  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|++..|++.+
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~   34 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV   34 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999988755

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.88  E-value=0.33  Score=38.58  Aligned_cols=90  Identities=17%  Similarity=0.120  Sum_probs=56.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..+++.+...|.+|+++++.+.+... +.          ..++..+ .|..+  .+.+... ...++|+|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~-~~----------~~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADY-LK----------KLGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH-HH----------HcCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            4788999999999999999999999888766311 11          1122111 11121  2333333 2347999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+.  ......+..++...+++.++.
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~  244 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGL  244 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEee
Confidence            8874  344556666665568887774

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.87  E-value=0.45  Score=38.19  Aligned_cols=93  Identities=13%  Similarity=0.172  Sum_probs=56.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEE-EEccCCC-HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKD-YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~-~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|. +|++++++.++......          ..++.. +..+-.+ .+.+.++.. .++|+++
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~----------~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vi  229 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS----------ELGFDAAINYKTDNVAERLRELCP-EGVDVYF  229 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------hcCCcEEEECCCCCHHHHHHHHCC-CCceEEE
Confidence            48899999999998888898 79999887655211100          012222 2111112 233443332 4799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ++.+..  .....++.++...+++.++..
T Consensus       230 d~~g~~--~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         230 DNVGGE--ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             ECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence            988753  345666777755678877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.82  E-value=0.27  Score=30.16  Aligned_cols=29  Identities=38%  Similarity=0.581  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|++|-.++..|.+.|.+|+++.|.+..
T Consensus         6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    6 GGGFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             SSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            67999999999999999999999998766

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PLN02928 oxidoreductase family protein

Probab=92.82  E-value=0.42  Score=38.61  Aligned_cols=95  Identities=14%  Similarity=0.072  Sum_probs=53.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..|...+........ .      ...+..+........++.++++  .+|+|+.+...
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~L~ell~--~aDiVvl~lPl  236 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLI-P------NGDVDDLVDEKGGHEDIYEFAG--EADIVVLCCTL  236 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcc-c------cccccccccccCcccCHHHHHh--hCCEEEECCCC
Confidence            5699999999999999999999988643211000000 0      0000100001113456778887  89999987765


Q ss_pred             CccchHH-----HHHhCCCCceEEEEeecc
Q 025908           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (246)
                      +. .+..     .++.|+....||.++-..
T Consensus       237 t~-~T~~li~~~~l~~Mk~ga~lINvaRG~  265 (347)
T PLN02928        237 TK-ETAGIVNDEFLSSMKKGALLVNIARGG  265 (347)
T ss_pred             Ch-HhhcccCHHHHhcCCCCeEEEECCCcc
Confidence            42 3333     344455445666666433

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.74  E-value=0.48  Score=37.73  Aligned_cols=94  Identities=19%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      .|++|.+|..+++.+...|.+|++++++..+.. .+..          .++ .++..+-.+ .+.+..... .++|.+++
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~  213 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FLKS----------LGCDRPINYKTEDLGEVLKKEYP-KGVDVVYE  213 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HHHH----------cCCceEEeCCCccHHHHHHHhcC-CCCeEEEE
Confidence            388999999999999999999999988765421 1110          111 122222111 122333222 47999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeecce
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +.+.  ......++.++...++|.+++...
T Consensus       214 ~~g~--~~~~~~~~~l~~~g~~v~~g~~~~  241 (329)
T cd08250         214 SVGG--EMFDTCVDNLALKGRLIVIGFISG  241 (329)
T ss_pred             CCcH--HHHHHHHHHhccCCeEEEEecccC
Confidence            8873  344555666665568888876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=92.72  E-value=0.22  Score=39.40  Aligned_cols=19  Identities=32%  Similarity=0.457  Sum_probs=17.3

Q ss_pred             CCccccchHHHHHHHHHCC
Q 025908            1 MGGTRFIGVFLSRLLVKEG   19 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g   19 (246)
                      .||||.+|+.+++.|.++.
T Consensus         7 vGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           7 LGATGAVGQVLLELLEERH   25 (334)
T ss_pred             EeccchHHHHHHHHHHhcC
Confidence            4999999999999999964

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=92.71  E-value=0.91  Score=32.02  Aligned_cols=69  Identities=20%  Similarity=0.278  Sum_probs=46.5

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC--C-----HHHHHHhhhcCCcc
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-----YDFVKSSLSAKGFD   74 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~-----~~~~~~~~~~~~~d   74 (246)
                      ||-|-+|++.++.+..++|-|.-++-..+...               +.-.++.+|-+  +     .+.+.+.+.+.++|
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            88999999999999999998887776554421               12222333322  1     23445556667899


Q ss_pred             EEEecCCCCcc
Q 025908           75 VVYDINGREAD   85 (246)
Q Consensus        75 ~vi~~~~~~~~   85 (246)
                      .|++.+|.+..
T Consensus        75 av~CVAGGWAG   85 (236)
T KOG4022|consen   75 AVFCVAGGWAG   85 (236)
T ss_pred             eEEEeeccccC
Confidence            99999887543

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=92.70  E-value=0.39  Score=38.87  Aligned_cols=60  Identities=17%  Similarity=0.092  Sum_probs=44.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |+|.+|+.+++.+.+.|++|++++.+++.....+             .-..+.+++.|.+.+.++.+  .+|+|.
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~-------------ad~~~~~~~~d~~~i~~~a~--~~dvit   65 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQV-------------ADHVVLAPFFDPAAIRELAE--SCDVIT   65 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHh-------------CceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence            3489999999999999999999988765422211             12344678889999988887  778764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.58  E-value=0.071  Score=42.37  Aligned_cols=29  Identities=17%  Similarity=0.219  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|..++..|+..|++|++.++++..
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~   42 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGA   42 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            56999999999999999999999998654

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=92.54  E-value=0.33  Score=39.14  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=24.1

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~   29 (246)
                      +|++|++|++|++.|.+++ .++..+.++.
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            5999999999999998876 5888885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=92.52  E-value=0.35  Score=37.72  Aligned_cols=93  Identities=22%  Similarity=0.239  Sum_probs=51.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCch-hhhhhcCceEEEEccCCCHHHHHHhhhcC--------
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQ-EFAEFSSKILHLKGDRKDYDFVKSSLSAK--------   71 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~--~~~~-~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--------   71 (246)
                      |.|..|..+++.|+++||+|++..|++.+..+.+..  .... ...+.-....++..=+.|.+.+.+.+...        
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~   86 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK   86 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence            578999999999999999999999998883221111  0000 00011123333333444555555555310        


Q ss_pred             CccEEEecCCCCccchHHHHHhCC
Q 025908           72 GFDVVYDINGREADEVEPILDALP   95 (246)
Q Consensus        72 ~~d~vi~~~~~~~~~~~~l~~a~~   95 (246)
                      .=.++|+++......++.+.+.++
T Consensus        87 ~G~i~IDmSTisp~~a~~~a~~~~  110 (286)
T COG2084          87 PGAIVIDMSTISPETARELAAALA  110 (286)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHH
Confidence            123555666655555665555544

>PRK06487 glycerate dehydrogenase; Provisional

Probab=92.49  E-value=0.53  Score=37.53  Aligned_cols=77  Identities=17%  Similarity=0.080  Sum_probs=47.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|..-|.+|++..|....                 ...        ...++.++++  ..|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            56899999999999889999998775321                 111        1124677777  88888866654


Q ss_pred             CccchHH-----HHHhCCCCceEEEEeecc
Q 025908           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (246)
                      +. .++.     .++.++....||.+|-..
T Consensus       208 t~-~T~~li~~~~~~~mk~ga~lIN~aRG~  236 (317)
T PRK06487        208 TE-HTRHLIGARELALMKPGALLINTARGG  236 (317)
T ss_pred             Ch-HHhcCcCHHHHhcCCCCeEEEECCCcc
Confidence            32 2333     334444444566555433

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=92.48  E-value=0.15  Score=39.51  Aligned_cols=30  Identities=30%  Similarity=0.439  Sum_probs=27.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|..|..++..|++.||+|++..|..++.
T Consensus        42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k~   71 (327)
T KOG0409|consen   42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDKC   71 (327)
T ss_pred             eeccchHHHHHHHHHcCCEEEEEeCcHHHH
Confidence            568899999999999999999999998773

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=92.40  E-value=0.51  Score=37.19  Aligned_cols=92  Identities=15%  Similarity=0.166  Sum_probs=56.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +|++|.+|..+++.+...|.+|++++++..+.. .+.          ..++..+ .|..+.   +.+.+.....++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAE-LVR----------QAGADAV-FNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEE
Confidence            478999999999999999999999988765421 111          0122111 233322   3344444445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ++++..  ......+.+....+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            988653  233344545544578877753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.39  E-value=0.44  Score=38.20  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=25.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|+.+++.|...|++|++.+|+...
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            56999999999999999999999987543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=92.35  E-value=1.3  Score=33.96  Aligned_cols=100  Identities=16%  Similarity=0.196  Sum_probs=58.0

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCC-------CCC--------chhhhhhcCceEE--EEccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------GES--------DQEFAEFSSKILH--LKGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------~~~--------~~~~~~~~~~v~~--~~~D~~~~~~~   64 (246)
                      |.|-+|..+++.|...|. ++++++.+.-.. +.+.       ...        ..+..+..+.+++  +...++ .+.+
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i~-~~~~  116 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSL-SNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARLD-DDEL  116 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECc-chhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccCC-HHHH
Confidence            348999999999999995 777777654331 1111       000        0122233444444  333343 4566


Q ss_pred             HHhhhcCCccEEEecCCCCccchHH-HHHhCC-CCceEEEEeecce
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGV  108 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~-l~~a~~-~~~~~i~~Ss~~v  108 (246)
                      .++++  ++|+||.+....  ..+. +-++|. ..+.+|+.+..+.
T Consensus       117 ~~~~~--~~DiVi~~~D~~--~~r~~ln~~~~~~~ip~v~~~~~g~  158 (245)
T PRK05690        117 AALIA--GHDLVLDCTDNV--ATRNQLNRACFAAKKPLVSGAAIRM  158 (245)
T ss_pred             HHHHh--cCCEEEecCCCH--HHHHHHHHHHHHhCCEEEEeeeccC
Confidence            77787  899999987532  2333 445555 4567777655433

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=92.27  E-value=0.29  Score=39.67  Aligned_cols=28  Identities=21%  Similarity=0.431  Sum_probs=20.5

Q ss_pred             CCccccchHHHHHHHHHC-CCe---EEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~---V~~l~r~   28 (246)
                      +||||++|+.+++.|+++ ..+   ++.++..
T Consensus         7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             EeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            499999999999966665 455   5555543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.22  E-value=0.34  Score=37.85  Aligned_cols=48  Identities=15%  Similarity=0.284  Sum_probs=35.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|++|.+|+.++..|+++|.+|++..|+                                ..++.+.++  ++|+||++.
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~~--------------------------------t~~L~~~~~--~aDIvI~At  210 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHSR--------------------------------TQNLPELVK--QADIIVGAV  210 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeCC--------------------------------chhHHHHhc--cCCEEEEcc
Confidence            4777889999999999888888877652                                123444455  899999999


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      |.
T Consensus       211 G~  212 (283)
T PRK14192        211 GK  212 (283)
T ss_pred             CC
Confidence            73

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=92.12  E-value=0.59  Score=37.11  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~   29 (246)
                      +|++|++|..++..|...|+  +|.+++|..
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            58999999999999999986  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.12  E-value=0.58  Score=37.05  Aligned_cols=91  Identities=22%  Similarity=0.141  Sum_probs=58.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +|++|.+|..+++.+...|.+|++++++..+.. .+.+          .++..+ .|..+   .+.+.......++|.++
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LVRA----------LGADVA-VDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----------cCCCEE-EecCCccHHHHHHHHcCCCCceEEE
Confidence            478999999999999999999999988765521 1110          122111 12222   23344444434799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++.+..  .....++.+....+++.++.
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~  242 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGW  242 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEec
Confidence            998753  34566677765568887764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=92.11  E-value=0.015  Score=42.33  Aligned_cols=30  Identities=27%  Similarity=0.469  Sum_probs=24.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|++|-.++..|.+.|++|++++.++.+.
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v   36 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKV   36 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHHH
Confidence            679999999999999999999999987763

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.07  E-value=0.054  Score=42.46  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|..++..|...|++|++.++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            46999999999999999999999998654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.04  E-value=0.56  Score=37.04  Aligned_cols=92  Identities=21%  Similarity=0.208  Sum_probs=57.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..+++.+...|.+|++++++..+... +..          .++ .++..+..+ .+.+.......++|.+++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDA-LLA----------LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHH----------cCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence            4889999999999999999999999887654211 110          111 122222112 233444444347999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+.  ......++.+....+++.++.
T Consensus       220 ~~~~--~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         220 PVGG--PQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             CCch--HhHHHHHHhhccCCEEEEEEe
Confidence            8775  345556666665557777764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=91.97  E-value=0.95  Score=36.79  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=54.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|..+++.+...|.+|++++.+..+......          ..++..+ .|..+.+.+.+...  ++|+||.+.+.
T Consensus       191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~----------~~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g~  257 (360)
T PLN02586        191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN----------RLGADSF-LVSTDPEKMKAAIG--TMDYIIDTVSA  257 (360)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH----------hCCCcEE-EcCCCHHHHHhhcC--CCCEEEECCCC
Confidence            46999999999998899998888776554221111          1233222 12333344555443  68999999873


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      . ......++.++...+++.++
T Consensus       258 ~-~~~~~~~~~l~~~G~iv~vG  278 (360)
T PLN02586        258 V-HALGPLLGLLKVNGKLITLG  278 (360)
T ss_pred             H-HHHHHHHHHhcCCcEEEEeC
Confidence            2 23445667777445777665

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=91.97  E-value=0.15  Score=43.31  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|..++..|++.|++|++..+++..
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            57999999999999999999999998765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=91.94  E-value=0.46  Score=34.00  Aligned_cols=49  Identities=22%  Similarity=0.314  Sum_probs=35.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++.+|..+++.|.++|.+|.++.|..                                +++.+.+.  ++|+||.+.
T Consensus        50 iG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat   95 (168)
T cd01080          50 VGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAV   95 (168)
T ss_pred             ECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcC
Confidence            35655678888888888888887776641                                34556776  899999988


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        96 ~~~   98 (168)
T cd01080          96 GKP   98 (168)
T ss_pred             CCC
Confidence            763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=91.93  E-value=0.23  Score=39.67  Aligned_cols=29  Identities=17%  Similarity=0.090  Sum_probs=24.5

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~   29 (246)
                      +|++|.+|.+++..|...+.       ++..+++..
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            58899999999999998873       788888865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=91.89  E-value=0.2  Score=39.45  Aligned_cols=30  Identities=27%  Similarity=0.493  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|.+.|++|++..|++.+.
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~   37 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQAV   37 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            579999999999999999999999987663

>PRK07574 formate dehydrogenase; Provisional

Probab=91.88  E-value=0.38  Score=39.37  Aligned_cols=85  Identities=18%  Similarity=0.078  Sum_probs=52.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..|...... ...          ..+++       -..++.++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence            5689999999999999999999988753210 000          01221       1224666776  89999877654


Q ss_pred             CccchHHH-----HHhCCCCceEEEEeecce
Q 025908           83 EADEVEPI-----LDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~~~~~l-----~~a~~~~~~~i~~Ss~~v  108 (246)
                      + ..++++     ++.++.-.-||.++...+
T Consensus       259 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~i  288 (385)
T PRK07574        259 H-PETEHLFDADVLSRMKRGSYLVNTARGKI  288 (385)
T ss_pred             C-HHHHHHhCHHHHhcCCCCcEEEECCCCch
Confidence            3 334444     444554456676665443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=91.70  E-value=0.87  Score=36.39  Aligned_cols=29  Identities=21%  Similarity=0.159  Sum_probs=25.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.||+.+++.|..-|.+|++.++...+
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~  177 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPR  177 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCch
Confidence            56999999999999999999999995544

>PRK08328 hypothetical protein; Provisional

Probab=91.68  E-value=2.5  Score=32.02  Aligned_cols=104  Identities=19%  Similarity=0.258  Sum_probs=62.2

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCcccc----CC--CCCCch---------hhhhhcCceEE--EEccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ----QL--PGESDQ---------EFAEFSSKILH--LKGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~----~~--~~~~~~---------~~~~~~~~v~~--~~~D~~~~~~~   64 (246)
                      |.|-+|.++++.|...|. ++++++.+.-....    .+  ......         +..+..+.+.+  +...+ +.+.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            568899999999999995 77777765433111    11  001111         12233344444  33344 44556


Q ss_pred             HHhhhcCCccEEEecCCCCccchHHHH-HhCC-CCceEEEEeecceecc
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~l~-~a~~-~~~~~i~~Ss~~v~~~  111 (246)
                      .++++  ++|+||.+....  .++.++ ++|. ....+|+.++.+.+|.
T Consensus       113 ~~~l~--~~D~Vid~~d~~--~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDNF--ETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            77887  899999987552  234444 4455 5567888887776654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=91.45  E-value=0.93  Score=36.06  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=47.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.+..-|.+|.+..|.....               ..++.        ..++.++++  .+|+|+.+...
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~---------------~~~~~--------~~~l~ell~--~sDvv~lh~Pl  206 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNK---------------NEEYE--------RVSLEELLK--TSDIISIHAPL  206 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCcccc---------------ccCce--------eecHHHHhh--cCCEEEEeCCC
Confidence            568999999999988899999988753220               01111        224666776  78888765543


Q ss_pred             CccchHH-----HHHhCCCCceEEEEeecc
Q 025908           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (246)
                      + ..+++     .++.|+....||.+|-..
T Consensus       207 t-~~T~~li~~~~~~~Mk~~a~lIN~aRG~  235 (311)
T PRK08410        207 N-EKTKNLIAYKELKLLKDGAILINVGRGG  235 (311)
T ss_pred             C-chhhcccCHHHHHhCCCCeEEEECCCcc
Confidence            3 22333     333444444566555433

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=91.38  E-value=0.54  Score=38.42  Aligned_cols=26  Identities=27%  Similarity=0.319  Sum_probs=23.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (246)
                      |.|.||+.+++.|...|.+|.+.++.
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~  148 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPP  148 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCc
Confidence            57999999999999999999998753

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=91.37  E-value=0.66  Score=36.48  Aligned_cols=91  Identities=18%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +|++|.+|..+++.+...|.+|++++++..+.. .+..          .++.. ..+..+   .+.+.......++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLE-ACRA----------LGADV-AINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHH----------cCCCE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            488899999999999999999999888754421 1110          11111 122222   23333444334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++...  ....++.+....+++.++.
T Consensus       214 ~~~g~~~--~~~~~~~~~~~g~~i~~~~  239 (323)
T cd05276         214 DMVGGDY--LARNLRALAPDGRLVLIGL  239 (323)
T ss_pred             ECCchHH--HHHHHHhhccCCEEEEEec
Confidence            9987432  3444555554457776664

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=91.37  E-value=0.47  Score=37.53  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|++.|++|.+..|++.+
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~   35 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEA   35 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=91.23  E-value=0.29  Score=39.21  Aligned_cols=29  Identities=28%  Similarity=0.332  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|-+|..++..|.+.|++|+++.|++..
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56999999999999999999999997654

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=91.21  E-value=0.63  Score=31.38  Aligned_cols=86  Identities=19%  Similarity=0.264  Sum_probs=54.3

Q ss_pred             chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEEecCCCC
Q 025908            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      +|...+..+...|.+|+++++++.+. +.+.          ..++..+ .|..+   .+.+.++....++|+||++++. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~----------~~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKL-ELAK----------ELGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHH-HHHH----------HTTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHH-HHHH----------hhccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            67888888888899999999987663 1111          1333333 23222   3455555553479999999984 


Q ss_pred             ccchHHHHHhCCCCceEEEEee
Q 025908           84 ADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        84 ~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .......++.++...+++.++.
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~   90 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGV   90 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESS
T ss_pred             HHHHHHHHHHhccCCEEEEEEc
Confidence            2344556666664457776664

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.19  E-value=0.1  Score=40.97  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..++..|.+.|++|++.++++...
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            459999999999999999999999987663

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=91.18  E-value=0.073  Score=35.50  Aligned_cols=86  Identities=16%  Similarity=0.083  Sum_probs=43.1

Q ss_pred             ccccchHHHHHHHHHC----CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~----g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|.+|+.+++.|.+.    +.++.++..+. .......       .....+... .   .+.+   ++++..++|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~-~~~~~~~-------~~~~~~~~~-~---~~~~---~~~~~~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRS-MLISKDW-------AASFPDEAF-T---TDLE---ELIDDPDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESS-EEEETTH-------HHHHTHSCE-E---SSHH---HHHTHTT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECC-chhhhhh-------hhhcccccc-c---CCHH---HHhcCcCCCEEEE
Confidence            5799999999999986    46777766655 2111000       000011111 0   2333   4443337999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEe
Q 025908           79 INGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +++.. .....+.++++..+++|-.|
T Consensus        66 ~t~~~-~~~~~~~~~L~~G~~VVt~n   90 (117)
T PF03447_consen   66 CTSSE-AVAEYYEKALERGKHVVTAN   90 (117)
T ss_dssp             -SSCH-HHHHHHHHHHHTTCEEEES-
T ss_pred             CCCch-HHHHHHHHHHHCCCeEEEEC
Confidence            95542 22333444555556777555

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=91.16  E-value=2.7  Score=34.19  Aligned_cols=102  Identities=13%  Similarity=0.105  Sum_probs=61.0

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCC-------C--------CchhhhhhcCceEEE--EccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E--------SDQEFAEFSSKILHL--KGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------~--------~~~~~~~~~~~v~~~--~~D~~~~~~~   64 (246)
                      |.|-+|..+++.|...|. ++++++.+.-.. +.+..       .        ...+..+..+.+++.  ...++ .+..
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~  112 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDL-SNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNA  112 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcc-cccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHH
Confidence            568999999999999995 788777765331 11111       0        001223344555543  34443 4556


Q ss_pred             HHhhhcCCccEEEecCCCCccchHHHH-HhCC-CCceEEEEeecceec
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~l~-~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .++++  ++|+||.+....  .++.++ ++|. ....||+.+..+.+|
T Consensus       113 ~~~~~--~~DvVvd~~d~~--~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        113 LDELR--DADVILDGSDNF--DTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            67787  899999987532  233333 4555 556788877655444

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=91.11  E-value=0.97  Score=42.10  Aligned_cols=142  Identities=13%  Similarity=0.145  Sum_probs=79.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      +||-|..|-.|+..|..+|.+-.+++.+ .-+.  -++...--+|....-.+.+-.-|++..+....++++    .-+-.
T Consensus      1774 ~GGLGGFGLELaqWLi~RGar~lVLtSRsGirt--GYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGG 1851 (2376)
T KOG1202|consen 1774 VGGLGGFGLELAQWLIQRGARKLVLTSRSGIRT--GYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGG 1851 (2376)
T ss_pred             eccccchhHHHHHHHHhcCceEEEEeccccchh--hHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccc
Confidence            5899999999999999999766665543 3221  111111112221122334444566655655666653    14667


Q ss_pred             EEecCCCCcc--------------------chHHHH----HhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcccc
Q 025908           76 VYDINGREAD--------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~----~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      |||+|..-.+                    ++.++=    +.|...+.||.+||.+- |.+         .....+|.-+
T Consensus      1852 iFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvsc-GRG---------N~GQtNYG~a 1921 (2376)
T KOG1202|consen 1852 IFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSC-GRG---------NAGQTNYGLA 1921 (2376)
T ss_pred             hhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecc-cCC---------CCcccccchh
Confidence            7887764221                    112211    22335678999998664 111         1223345578


Q ss_pred             HHHHHHHHHh---cCCceEEeeccee
Q 025908          132 KLNTESVLES---KGVNWTSLRPVYI  154 (246)
Q Consensus       132 k~~~e~~~~~---~~~~~~ilR~~~i  154 (246)
                      ....|++|.+   .|++-+.+.-|.+
T Consensus      1922 NS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             hHHHHHHHHHhhhcCCCcceeeeecc
Confidence            8889999954   5776666665543

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=91.00  E-value=0.32  Score=39.40  Aligned_cols=78  Identities=17%  Similarity=0.256  Sum_probs=46.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccC---CCCCCchhhhhhc-CceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |+||+|-..+..|.+.||+|++++.++++....   ...+.++.+.++- .+..-  +-+.=..+...+++  +.|++|-
T Consensus         7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~--gRl~fTtd~~~a~~--~adv~fI   82 (414)
T COG1004           7 GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLAS--GRLRFTTDYEEAVK--DADVVFI   82 (414)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhcccc--CcEEEEcCHHHHHh--cCCEEEE
Confidence            789999999999999999999999998774321   1122222222211 11110  00111223444565  8888888


Q ss_pred             cCCCCc
Q 025908           79 INGREA   84 (246)
Q Consensus        79 ~~~~~~   84 (246)
                      +.|...
T Consensus        83 avgTP~   88 (414)
T COG1004          83 AVGTPP   88 (414)
T ss_pred             EcCCCC
Confidence            877643

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=90.96  E-value=1.1  Score=35.44  Aligned_cols=92  Identities=14%  Similarity=0.125  Sum_probs=56.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccC-CCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDR-KDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~-~~~~~~~~~~~~~~~d~vi~   78 (246)
                      .|++|.+|..+++.+...|.+|++++++.++.. .+.+          .++ .++..+- ...+.+.+.....++|.+++
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  213 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE-ELKA----------LGADEVIDSSPEDLAQRVKEATGGAGARLALD  213 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHHH-HHHh----------cCCCEEecccchhHHHHHHHHhcCCCceEEEE
Confidence            478899999999999999999999888765521 1111          122 1111111 11233444444457999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+..  .....++.++...+++.++.
T Consensus       214 ~~g~~--~~~~~~~~l~~~g~~v~~g~  238 (323)
T cd05282         214 AVGGE--SATRLARSLRPGGTLVNYGL  238 (323)
T ss_pred             CCCCH--HHHHHHHhhCCCCEEEEEcc
Confidence            98753  33455666665567777664

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=90.96  E-value=1.1  Score=36.58  Aligned_cols=26  Identities=23%  Similarity=0.164  Sum_probs=23.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (246)
                      |.|.||+.+++.|..-|.+|.+.++.
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            56999999999999999999998753

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=90.93  E-value=0.66  Score=36.40  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|++.|++|++..|++.+
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~   31 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDA   31 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            67999999999999999999999998765

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=90.93  E-value=1.8  Score=36.47  Aligned_cols=71  Identities=11%  Similarity=0.003  Sum_probs=46.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEE-----EccCCCHHHHHHhhhcCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-----KGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +.|.++..+++.+.+.|++|++++..++........         .+....+     .-+..|.+.+.++.+..++|+|+
T Consensus         9 g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~---------aD~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~   79 (449)
T TIGR00514         9 NRGEIALRILRACKELGIKTVAVHSTADRDALHVLL---------ADEAVCIGPAPSAKSYLNIPNIISAAEITGADAIH   79 (449)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEChhhhccccccc---------CCEEEEcCCCCchhchhCHHHHHHHHHHhCCCEEE
Confidence            468899999999999999999997754432111110         0111111     11455667788777777999998


Q ss_pred             ecCCC
Q 025908           78 DINGR   82 (246)
Q Consensus        78 ~~~~~   82 (246)
                      -..+.
T Consensus        80 pg~g~   84 (449)
T TIGR00514        80 PGYGF   84 (449)
T ss_pred             eCCCc
Confidence            76643

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=90.92  E-value=0.083  Score=36.60  Aligned_cols=31  Identities=23%  Similarity=0.452  Sum_probs=26.9

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (246)
                      +|++|.+|.+++..|...+  .++..++++.++
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~   38 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDK   38 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCccc
Confidence            5899999999999999986  589999988654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=90.90  E-value=0.42  Score=38.61  Aligned_cols=51  Identities=18%  Similarity=0.144  Sum_probs=37.3

Q ss_pred             CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc---CC-ceEEeecceeeCCC
Q 025908           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK---GV-NWTSLRPVYIYGPL  158 (246)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~---~~-~~~ilR~~~i~g~~  158 (246)
                      ..+++|.++|....            .......| +.|...|+.++..   .+ ..+|+|||.+.|..
T Consensus       248 ~~K~~vIvTSfn~~------------~~s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h  303 (410)
T PF08732_consen  248 GNKKLVIVTSFNNN------------AISSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEH  303 (410)
T ss_pred             CCceEEEEEecCcc------------hhhhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCC
Confidence            67899999986651            22223344 9999999998753   23 68999999999964

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.86  E-value=0.79  Score=36.05  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=24.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~   28 (246)
                      +|.+|.+|+.++..|+++|++|++..|.
T Consensus       165 IG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        165 IGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            4778899999999999999999998554

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=90.79  E-value=0.53  Score=37.31  Aligned_cols=71  Identities=18%  Similarity=0.251  Sum_probs=42.5

Q ss_pred             ccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+|.+|+.++..|...|  ++|.+++|+..+......+. ............+..   .+.+    .++  ++|+||.++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL-~~~~~~~~~~~~i~~---~~~~----~l~--~aDIVIita   76 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDL-EDALAFLPSPVKIKA---GDYS----DCK--DADIVVITA   76 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhH-HHHhhccCCCeEEEc---CCHH----HhC--CCCEEEEcc
Confidence            35999999999999998  68999999877632211110 000000011222222   2222    244  999999999


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      |..
T Consensus        77 g~~   79 (306)
T cd05291          77 GAP   79 (306)
T ss_pred             CCC
Confidence            874

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=90.78  E-value=0.88  Score=36.77  Aligned_cols=90  Identities=16%  Similarity=0.177  Sum_probs=54.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC---CH-HHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DY-DFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~---~~-~~~~~~~~~~~~d~v   76 (246)
                      +|++|-+|...++.+...|.+|++++++..+......          ..++..+ .|..   +. +.+.+... .++|++
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~----------~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----------KLGFDEA-FNYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----------hcCCCEE-EECCCcccHHHHHHHHCC-CCcEEE
Confidence            4889999999999988899999988877655211100          0122211 1222   21 22333222 379999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +++.|.  ......++.++...+++.++
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEEC
Confidence            999874  34555667666445777655

>PRK08462 biotin carboxylase; Validated

Probab=90.76  E-value=2  Score=36.10  Aligned_cols=69  Identities=12%  Similarity=-0.038  Sum_probs=49.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEc-------cCCCHHHHHHhhhcCCccE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-------DRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------D~~~~~~~~~~~~~~~~d~   75 (246)
                      +.|.++..+++.+.+.|++++++....+.....+.           ..-+.+..       ++.|.+.+.++.++.++|+
T Consensus        11 ~~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~-----------~ad~~~~~~~~~~~~~y~~~~~l~~~~~~~~~D~   79 (445)
T PRK08462         11 NRGEIALRAIRTIQEMGKEAIAIYSTADKDALYLK-----------YADAKICIGGAKSSESYLNIPAIISAAEIFEADA   79 (445)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEechhhcCCchhh-----------hCCEEEEeCCCchhcccCCHHHHHHHHHHcCCCE
Confidence            45888999999999999999999876665221111           11122222       6677888888888889999


Q ss_pred             EEecCCC
Q 025908           76 VYDINGR   82 (246)
Q Consensus        76 vi~~~~~   82 (246)
                      |+-..+.
T Consensus        80 i~pg~g~   86 (445)
T PRK08462         80 IFPGYGF   86 (445)
T ss_pred             EEECCCc
Confidence            9987764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=90.73  E-value=1.2  Score=35.91  Aligned_cols=70  Identities=24%  Similarity=0.196  Sum_probs=43.6

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh--cCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~--~~~~d~vi   77 (246)
                      .||+|-+|++.++.+...+ ..|.+.++.....  ...          ..+.. ...|+.+++-.+...+  ..++|+|+
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~--l~k----------~lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE--LVK----------KLGAD-EVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH--HHH----------HcCCc-EeecCCCHHHHHHHHhhcCCCccEEE
Confidence            4899999999999999999 4555544433331  111          01111 2346666554444444  34799999


Q ss_pred             ecCCCC
Q 025908           78 DINGRE   83 (246)
Q Consensus        78 ~~~~~~   83 (246)
                      ++.+..
T Consensus       231 D~vg~~  236 (347)
T KOG1198|consen  231 DCVGGS  236 (347)
T ss_pred             ECCCCC
Confidence            999875

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=90.70  E-value=0.23  Score=38.72  Aligned_cols=31  Identities=26%  Similarity=0.416  Sum_probs=27.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      ++|.|.+|+.+++.|.++|+.|.++.++.+.
T Consensus         8 IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~   38 (279)
T COG0287           8 IVGLGLMGGSLARALKEAGLVVRIIGRDRSA   38 (279)
T ss_pred             EECCchHHHHHHHHHHHcCCeEEEEeecCcH
Confidence            3679999999999999999999888887665

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.66  E-value=0.18  Score=40.04  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..++..|.+.|++|+++.++...
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            56999999999999999999999987655

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.63  E-value=0.51  Score=37.28  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|++.|++|.+..|++++
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~   35 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEA   35 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            46899999999999999999999988655

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=90.53  E-value=0.6  Score=32.29  Aligned_cols=67  Identities=22%  Similarity=0.184  Sum_probs=37.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC----------HHHHHHhh--h
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----------YDFVKSSL--S   69 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----------~~~~~~~~--~   69 (246)
                      ||.+..-..+++.|.+.|++|.+++...........          ..++.+....+..          ...+..++  .
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   70 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEE----------EDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAAR   70 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEE----------ETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHC
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccc----------cCCceEEeccCCccchhhhhHHHHHHHHHHHhhh
Confidence            667777889999999999999999987666422111          2456655544321          34455666  5


Q ss_pred             cCCccEEEe
Q 025908           70 AKGFDVVYD   78 (246)
Q Consensus        70 ~~~~d~vi~   78 (246)
                      ..++|+|..
T Consensus        71 ~~~~Dvv~~   79 (160)
T PF13579_consen   71 RERPDVVHA   79 (160)
T ss_dssp             T---SEEEE
T ss_pred             ccCCeEEEe
Confidence            457887653

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=90.46  E-value=0.37  Score=37.93  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=25.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|.+..|++.+
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~   37 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA   37 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            46999999999999999999999887655

>PRK08223 hypothetical protein; Validated

Probab=90.41  E-value=1.9  Score=33.75  Aligned_cols=101  Identities=12%  Similarity=0.028  Sum_probs=59.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCC-------C-C-------CchhhhhhcCceEEE--EccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLP-------G-E-------SDQEFAEFSSKILHL--KGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------~-~-------~~~~~~~~~~~v~~~--~~D~~~~~~~   64 (246)
                      |.|-+|..+++.|...|. ++.+++.+.-.. +++.       . +       ...+..+..+.+++.  ...++ .+..
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~-SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~-~~n~  111 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFEL-RNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG-KENA  111 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcch-hccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC-ccCH
Confidence            568899999999999995 777777764331 1111       0 0       011233444555544  33443 4556


Q ss_pred             HHhhhcCCccEEEecCCCCccchHHH-HHhCC-CCceEEEEeecc
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEPI-LDALP-NLEQFIYCSSAG  107 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~l-~~a~~-~~~~~i~~Ss~~  107 (246)
                      .++++  ++|+|+++.-.....++.+ -++|. ..+.+|+.+..+
T Consensus       112 ~~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        112 DAFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             HHHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            77887  9999997764321133444 45566 556778775544

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.29  E-value=0.76  Score=35.16  Aligned_cols=92  Identities=18%  Similarity=0.239  Sum_probs=54.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +|++| +|..+++.+...|.+|+++++++.+.. .+..          .+... ..|..+   .+.+. .....++|.++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~-~~~~~~~~~~~~~~-~~~~~~~d~vi  206 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAKE----------LGADH-VIDYKEEDLEEELR-LTGGGGADVVI  206 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHH----------hCCce-eccCCcCCHHHHHH-HhcCCCCCEEE
Confidence            47778 999999999999999999988765421 1110          11111 112222   22222 22334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ++++.. ......++.++...+++.++...
T Consensus       207 ~~~~~~-~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         207 DAVGGP-ETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             ECCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence            988742 23455666666555788777543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=90.18  E-value=2.9  Score=34.31  Aligned_cols=103  Identities=17%  Similarity=0.115  Sum_probs=59.9

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccc----cCCCC---C-------CchhhhhhcCceEE--EEccCCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA----QQLPG---E-------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~----~~~~~---~-------~~~~~~~~~~~v~~--~~~D~~~~~~~~   65 (246)
                      |.|-+|..+++.|...|. ++++++++.-...    ..+-.   +       ...+..+..+.+.+  +...+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            568899999999999996 7888887632210    00000   0       00122223344444  33333 345667


Q ss_pred             HhhhcCCccEEEecCCCCccchHH-HHHhCC-CCceEEEEeecceec
Q 025908           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~-l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      ++++  ++|+||++.....  ++. +-++|. ....+|+.+..+.+|
T Consensus       221 ~~~~--~~D~Vv~~~d~~~--~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNFP--TRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             HHHh--CCCEEEECCCCHH--HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  8999999876432  333 345565 556788877655443

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=90.17  E-value=0.63  Score=36.92  Aligned_cols=28  Identities=29%  Similarity=0.482  Sum_probs=25.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      |+|.+|+++++.|.+.|++|++..|+..
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            5799999999999999999999998754

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=90.14  E-value=0.69  Score=36.72  Aligned_cols=29  Identities=31%  Similarity=0.582  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.-|++|+..|.+.||+|+...|++.-
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~   36 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEI   36 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHH
Confidence            56899999999999999999999997544

>PRK08818 prephenate dehydrogenase; Provisional

Probab=89.95  E-value=0.59  Score=38.06  Aligned_cols=28  Identities=21%  Similarity=0.292  Sum_probs=24.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~   28 (246)
                      +|.+|.+|+.+++.|.+. +++|+++++.
T Consensus        10 IGl~GliGgslA~alk~~~~~~V~g~D~~   38 (370)
T PRK08818         10 VGSAGAYGRWLARFLRTRMQLEVIGHDPA   38 (370)
T ss_pred             ECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence            478899999999999975 8899998875

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=89.95  E-value=1.5  Score=34.91  Aligned_cols=93  Identities=13%  Similarity=0.174  Sum_probs=55.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccC-CCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDR-KDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~-~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..+++.+...|.+|++++++..+......          ..++ .++..+- ...+.+..... .++|++++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~  220 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVE----------ELGFDAAINYKTPDLAEALKEAAP-DGIDVYFD  220 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------hcCCceEEecCChhHHHHHHHhcc-CCceEEEE
Confidence            4789999999999999999999999887655211100          0111 1221111 11222333332 47999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +.+.  ......++.++...+++.+++.
T Consensus       221 ~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         221 NVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             cchH--HHHHHHHHhcCCCceEEEEeec
Confidence            8874  3445556666644578877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=89.93  E-value=0.22  Score=31.75  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=25.8

Q ss_pred             ccccchHHHHHHHHHCC---CeEEEE-ecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEG---HQVTLF-TRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g---~~V~~l-~r~~~~~   32 (246)
                      |+|.+|.+|++.|++.|   ++|... .|++.+.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~   39 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKA   39 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHH
Confidence            67999999999999999   899966 7777663

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=89.91  E-value=2.1  Score=35.96  Aligned_cols=69  Identities=12%  Similarity=0.012  Sum_probs=45.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEE-------ccCCCHHHHHHhhhcCCccE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-------GDRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~-------~D~~~~~~~~~~~~~~~~d~   75 (246)
                      +.|.+|..+++.+.+.|+++++++...+.......         +.+  +.+.       -++.|.+.+.++.+..++|+
T Consensus         9 g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~---------~ad--~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~   77 (451)
T PRK08591          9 NRGEIALRIIRACKELGIKTVAVHSTADRDALHVQ---------LAD--EAVCIGPAPSKKSYLNIPAIISAAEITGADA   77 (451)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEcChhhccCCCHh---------HCC--EEEEeCCCCcccccCCHHHHHHHHHHhCCCE
Confidence            46889999999999999999998766543211110         011  2221       14456777877777679999


Q ss_pred             EEecCCC
Q 025908           76 VYDINGR   82 (246)
Q Consensus        76 vi~~~~~   82 (246)
                      |+-..+.
T Consensus        78 I~p~~~~   84 (451)
T PRK08591         78 IHPGYGF   84 (451)
T ss_pred             EEECCCc
Confidence            9876643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=89.73  E-value=3.7  Score=31.87  Aligned_cols=99  Identities=15%  Similarity=0.139  Sum_probs=57.6

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCC-C--------------CchhhhhhcCceEEEEcc-CCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPG-E--------------SDQEFAEFSSKILHLKGD-RKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~-~--------------~~~~~~~~~~~v~~~~~D-~~~~~~~~   65 (246)
                      |.|.+|.++++.|.+.| -++++++.+.-.. .++.. .              ...+.....+.+++...+ ..+++...
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~-sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~  115 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCV-TNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVA  115 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecc-cccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHH
Confidence            56899999999999999 5888888764331 11111 0              011222334454443332 33456666


Q ss_pred             HhhhcCCccEEEecCCCCccchHHHHHhCC-CCceEEEEe
Q 025908           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      +++. .++|+||.+.... ..-..+.+.|. ....||...
T Consensus       116 ~ll~-~~~D~VIdaiD~~-~~k~~L~~~c~~~~ip~I~~g  153 (268)
T PRK15116        116 EYMS-AGFSYVIDAIDSV-RPKAALIAYCRRNKIPLVTTG  153 (268)
T ss_pred             HHhc-CCCCEEEEcCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence            6663 3799999887642 22334666676 445666443

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=89.65  E-value=0.19  Score=38.93  Aligned_cols=73  Identities=14%  Similarity=0.077  Sum_probs=43.4

Q ss_pred             CCccccchHHHHHHHHHCC----CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +||+|.+|..++..|+..+    .++..+++++.+.......     ........  ....+.-.+++.++++  ++|.|
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-----l~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV   74 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-----LQDAVEPL--ADIKVSITDDPYEAFK--DADVV   74 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-----HHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence            5888999999999999988    7899999877553211100     00000000  0111111122345566  99999


Q ss_pred             EecCCC
Q 025908           77 YDINGR   82 (246)
Q Consensus        77 i~~~~~   82 (246)
                      +.+++.
T Consensus        75 v~t~~~   80 (263)
T cd00650          75 IITAGV   80 (263)
T ss_pred             EECCCC
Confidence            998876

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=89.55  E-value=0.21  Score=37.27  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=28.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +|++||+|+.++..+...|++|.-..|+...
T Consensus         8 fgg~gflg~~ic~~a~~sgy~vvsvsrsgas   38 (283)
T KOG4288|consen    8 FGGNGFLGKRICQEAVTSGYQVVSVSRSGAS   38 (283)
T ss_pred             ecccccchhhhhHHHHhcCceEEEeccccCC
Confidence            5999999999999999999999998887665

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=89.53  E-value=1  Score=35.10  Aligned_cols=89  Identities=15%  Similarity=0.135  Sum_probs=51.2

Q ss_pred             cccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      .|.+|...++.+...|.+ |+++++++.+. +...          ..++..+ .|..+ .+.+.+.....++|++|++.|
T Consensus       129 ~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~-~~a~----------~~Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~~G  196 (280)
T TIGR03366       129 AGMLGLTAAAAAAAAGAARVVAADPSPDRR-ELAL----------SFGATAL-AEPEVLAERQGGLQNGRGVDVALEFSG  196 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----------HcCCcEe-cCchhhHHHHHHHhCCCCCCEEEECCC
Confidence            488999999988888976 88776665542 1111          1122211 12222 223333333347999999987


Q ss_pred             CCccchHHHHHhCCCCceEEEEee
Q 025908           82 READEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .. ......++.++...+++.++.
T Consensus       197 ~~-~~~~~~~~~l~~~G~iv~~G~  219 (280)
T TIGR03366       197 AT-AAVRACLESLDVGGTAVLAGS  219 (280)
T ss_pred             Ch-HHHHHHHHHhcCCCEEEEecc
Confidence            53 234455666665557777763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK05442 malate dehydrogenase; Provisional

Probab=89.52  E-value=0.83  Score=36.57  Aligned_cols=30  Identities=20%  Similarity=0.128  Sum_probs=24.1

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKA   30 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~~   30 (246)
                      +|++|.+|..++..|...+.       ++..+++.+.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            58889999999999887652       7888887543

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=89.51  E-value=0.26  Score=40.47  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=24.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|++|..++..|. .||+|+++.+++.+.
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            67999999996665 599999999998774

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=89.51  E-value=1.4  Score=35.34  Aligned_cols=91  Identities=23%  Similarity=0.230  Sum_probs=55.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|++|.+|..+++.+...|.+|+++++.. + .....          ..++.. ..|..+.+....+....++|.++++.
T Consensus       169 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~~----------~~g~~~-~~~~~~~~~~~~l~~~~~vd~vi~~~  235 (350)
T cd08248         169 LGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLVK----------SLGADD-VIDYNNEDFEEELTERGKFDVILDTV  235 (350)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHHH----------HhCCce-EEECCChhHHHHHHhcCCCCEEEECC
Confidence            47899999999999999999998887642 2 11111          012211 12223323233333334799999998


Q ss_pred             CCCccchHHHHHhCCCCceEEEEeec
Q 025908           81 GREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +..  .....++.++...+++.++..
T Consensus       236 g~~--~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         236 GGD--TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             ChH--HHHHHHHHhccCCEEEEecCC
Confidence            753  455566666655688877643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.49  E-value=1  Score=35.41  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..++..|+..|++|++.+|++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530         11 GAGQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56999999999999999999999998665

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=89.47  E-value=0.2  Score=39.09  Aligned_cols=30  Identities=17%  Similarity=0.175  Sum_probs=26.3

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (246)
                      +|+ |.+|++++..|...| .+|+++.|+..+
T Consensus       129 lGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~  159 (278)
T PRK00258        129 LGA-GGAARAVILPLLDLGVAEITIVNRTVER  159 (278)
T ss_pred             EcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            354 999999999999999 799999998766

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=89.44  E-value=3.7  Score=33.92  Aligned_cols=103  Identities=12%  Similarity=0.049  Sum_probs=60.8

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccc----cCC-C-CCCc--------hhhhhhcCceEE--EEccCCCHHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA----QQL-P-GESD--------QEFAEFSSKILH--LKGDRKDYDFVK   65 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~----~~~-~-~~~~--------~~~~~~~~~v~~--~~~D~~~~~~~~   65 (246)
                      |.|-+|..+++.|...|. ++.+++.+.-...    ..+ . ....        ....+..+.+++  +...++ .+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence            568899999999999995 6777766542211    111 0 1010        122234455554  444444 44566


Q ss_pred             HhhhcCCccEEEecCCCCccchHHHH-HhCC-CCceEEEEeecceec
Q 025908           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        66 ~~~~~~~~d~vi~~~~~~~~~~~~l~-~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      ++++  ++|+|+.+....  .++.++ ++|. ..+.||+.+..+.+|
T Consensus       128 ~~~~--~~D~Vvd~~d~~--~~r~~ln~~~~~~~~p~v~~~~~g~~G  170 (392)
T PRK07878        128 ELFS--QYDLILDGTDNF--ATRYLVNDAAVLAGKPYVWGSIYRFEG  170 (392)
T ss_pred             HHHh--cCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  899999886432  333333 4555 456788887766655

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=89.40  E-value=1.2  Score=35.00  Aligned_cols=92  Identities=22%  Similarity=0.218  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      +|++|.+|..++..+...|.+|++++++..+.. .+..          .++ .++..+-.+ .+.+.......++|.+++
T Consensus       146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~----------~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~  214 (323)
T cd08241         146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLA-LARA----------LGADHVIDYRDPDLRERVKALTGGRGVDVVYD  214 (323)
T ss_pred             EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH-HHHH----------cCCceeeecCCccHHHHHHHHcCCCCcEEEEE
Confidence            478899999999999999999999988765421 1110          111 111111111 234444444346999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+.  ......++.++...+++.++.
T Consensus       215 ~~g~--~~~~~~~~~~~~~g~~v~~~~  239 (323)
T cd08241         215 PVGG--DVFEASLRSLAWGGRLLVIGF  239 (323)
T ss_pred             CccH--HHHHHHHHhhccCCEEEEEcc
Confidence            8874  334445566664457777664

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.38  E-value=1.1  Score=34.93  Aligned_cols=49  Identities=24%  Similarity=0.407  Sum_probs=37.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|.++.+|+.++..|.++|.+|+++.++.                                ..+.+.++  ++|+||.+.
T Consensus       164 IGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------------~~l~~~~~--~ADIVIsAv  209 (286)
T PRK14175        164 IGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------------KDMASYLK--DADVIVSAV  209 (286)
T ss_pred             ECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHHHh--hCCEEEECC
Confidence            47777789999999888888888776531                                23556666  999999998


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      |..
T Consensus       210 g~p  212 (286)
T PRK14175        210 GKP  212 (286)
T ss_pred             CCC
Confidence            764

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=89.36  E-value=1.3  Score=34.72  Aligned_cols=92  Identities=20%  Similarity=0.224  Sum_probs=55.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      .|++|.+|..+++.+...|.+|+++++++.+.. .+.          ..++. ++..+-.+ .+.+.......++|.+++
T Consensus       143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  211 (320)
T cd05286         143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE-LAR----------AAGADHVINYRDEDFVERVREITGGRGVDVVYD  211 (320)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH----------HCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEE
Confidence            378899999999999999999999887655421 111          01221 12211111 233444444447999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+.  ......++.++...+++.++.
T Consensus       212 ~~~~--~~~~~~~~~l~~~g~~v~~g~  236 (320)
T cd05286         212 GVGK--DTFEGSLDSLRPRGTLVSFGN  236 (320)
T ss_pred             CCCc--HhHHHHHHhhccCcEEEEEec
Confidence            8774  244455566665567887764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=89.32  E-value=0.44  Score=38.47  Aligned_cols=67  Identities=16%  Similarity=0.223  Sum_probs=52.6

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH-HHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~~   80 (246)
                      |+||+.+.++..|.+++ .+|++.+|......+...          ..+++.+..|+.+++ .+....+  ..|.++.+.
T Consensus         9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----------~~~~~av~ldv~~~~~~L~~~v~--~~D~viSLl   76 (445)
T KOG0172|consen    9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----------GINIKAVSLDVADEELALRKEVK--PLDLVISLL   76 (445)
T ss_pred             cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----------CCCccceEEEccchHHHHHhhhc--ccceeeeec
Confidence            68999999999999875 689998887766433333          245888999999887 7888887  889998765


Q ss_pred             C
Q 025908           81 G   81 (246)
Q Consensus        81 ~   81 (246)
                      .
T Consensus        77 P   77 (445)
T KOG0172|consen   77 P   77 (445)
T ss_pred             c
Confidence            4

>PRK06849 hypothetical protein; Provisional

Probab=89.24  E-value=0.92  Score=37.30  Aligned_cols=72  Identities=19%  Similarity=0.232  Sum_probs=46.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC----HHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~d~v   76 (246)
                      ||++..+|..+++.|.+.|++|++++..+......         .........+...-.+    .+.+.++++++++|+|
T Consensus        10 ~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~---------s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849         10 TGARAPAALELARLFHNAGHTVILADSLKYPLSRF---------SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH---------HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            68888899999999999999999998876442110         0001222222111123    3566666777789999


Q ss_pred             EecCC
Q 025908           77 YDING   81 (246)
Q Consensus        77 i~~~~   81 (246)
                      |-+..
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            97654

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=89.21  E-value=0.75  Score=37.26  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=46.0

Q ss_pred             CCccccchHHHHHHHH-HCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLV-KEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~-~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +||||.+|+.+++.|. ++.+   +++.++...+.-. ...          ..+.....-++.+.+    .+.  ++|++
T Consensus         6 vGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~-~~~----------f~~~~~~v~~~~~~~----~~~--~vDiv   68 (366)
T TIGR01745         6 VGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQA-APS----------FGGTTGTLQDAFDID----ALK--ALDII   68 (366)
T ss_pred             EcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCC-cCC----------CCCCcceEEcCcccc----ccc--CCCEE
Confidence            4999999999999999 4454   3444444322211 110          011122222333221    334  89999


Q ss_pred             EecCCCCccchHHHHHhCC--CC-ceEEEEeecc
Q 025908           77 YDINGREADEVEPILDALP--NL-EQFIYCSSAG  107 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~--~~-~~~i~~Ss~~  107 (246)
                      +.+++..  -++.+...+.  +. ..+|-.||..
T Consensus        69 ffa~g~~--~s~~~~p~~~~aG~~~~VIDnSSa~  100 (366)
T TIGR01745        69 ITCQGGD--YTNEIYPKLRESGWQGYWIDAASSL  100 (366)
T ss_pred             EEcCCHH--HHHHHHHHHHhCCCCeEEEECChhh
Confidence            9998754  3334444333  43 3455555433

>PLN02688 pyrroline-5-carboxylate reductase

Probab=89.11  E-value=0.75  Score=35.56  Aligned_cols=29  Identities=21%  Similarity=0.247  Sum_probs=24.2

Q ss_pred             ccccchHHHHHHHHHCCC----eEEEE-ecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGH----QVTLF-TRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~----~V~~l-~r~~~~   31 (246)
                      |.|.+|.++++.|++.|+    +|++. .|++.+
T Consensus         7 G~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~   40 (266)
T PLN02688          7 GAGKMAEAIARGLVASGVVPPSRISTADDSNPAR   40 (266)
T ss_pred             CCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH
Confidence            479999999999999998    88887 665544

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=89.04  E-value=1.6  Score=34.88  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=23.2

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~   29 (246)
                      .||+|+.|.+|++.|..+. .++...+.+.
T Consensus         8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           8 VGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             EcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            5999999999999999986 4666555444

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=89.01  E-value=1  Score=30.64  Aligned_cols=28  Identities=25%  Similarity=0.367  Sum_probs=24.0

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~   28 (246)
                      +|+||.||++...-+.+.+  ++|.+++-.
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~   33 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAG   33 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcC
Confidence            5999999999999999886  688887764

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=88.94  E-value=0.97  Score=38.83  Aligned_cols=27  Identities=19%  Similarity=0.119  Sum_probs=24.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~   29 (246)
                      |.|.||+.+++.|...|.+|++.+|..
T Consensus       147 G~G~IG~~vA~~l~~fG~~V~~~d~~~  173 (526)
T PRK13581        147 GLGRIGSEVAKRAKAFGMKVIAYDPYI  173 (526)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCC
Confidence            568999999999999999999998854

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=88.89  E-value=0.33  Score=40.30  Aligned_cols=64  Identities=14%  Similarity=0.235  Sum_probs=43.1

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+|.+|..+++.|...| .+|+++.|+..+......          .-+...+     +.+++.+++.  ++|+||.+.+
T Consensus       187 GaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~----------~~g~~~i-----~~~~l~~~l~--~aDvVi~aT~  249 (417)
T TIGR01035       187 GAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAK----------ELGGEAV-----KFEDLEEYLA--EADIVISSTG  249 (417)
T ss_pred             CChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----------HcCCeEe-----eHHHHHHHHh--hCCEEEECCC
Confidence            35999999999999999 789999998765211110          0111111     2345667776  8999999976


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus       250 s~  251 (417)
T TIGR01035       250 AP  251 (417)
T ss_pred             CC
Confidence            53

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN03139 formate dehydrogenase; Provisional

Probab=88.72  E-value=0.88  Score=37.28  Aligned_cols=84  Identities=13%  Similarity=0.048  Sum_probs=49.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|.+..|..... +...          ..++..       .+++.++++  .+|+|+.+...
T Consensus       206 G~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~----------~~g~~~-------~~~l~ell~--~sDvV~l~lPl  265 (386)
T PLN03139        206 GAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEK----------ETGAKF-------EEDLDAMLP--KCDVVVINTPL  265 (386)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHh----------hcCcee-------cCCHHHHHh--hCCEEEEeCCC
Confidence            468999999999999999999988764321 0000          012211       124666776  78988876553


Q ss_pred             CccchHHHH-----HhCCCCceEEEEeecc
Q 025908           83 EADEVEPIL-----DALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~~~~~l~-----~a~~~~~~~i~~Ss~~  107 (246)
                      + ..+++++     +.++....||.++-..
T Consensus       266 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        266 T-EKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             C-HHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence            2 3444444     3444444566555433

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=88.66  E-value=2  Score=33.81  Aligned_cols=90  Identities=21%  Similarity=0.195  Sum_probs=56.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      .|++|.+|..+++.+...|.+|++++++..+. +.+.          ..++..+..+-.+ .+.+.+.  ..++|.++++
T Consensus       149 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~~----------~~g~~~~~~~~~~~~~~i~~~--~~~~d~vl~~  215 (320)
T cd08243         149 RGGTSSVGLAALKLAKALGATVTATTRSPERA-ALLK----------ELGADEVVIDDGAIAEQLRAA--PGGFDKVLEL  215 (320)
T ss_pred             EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH----------hcCCcEEEecCccHHHHHHHh--CCCceEEEEC
Confidence            47889999999999999999999988876552 1111          1223222212111 2334444  3579999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEee
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .+.  ......++.+....+++.++.
T Consensus       216 ~~~--~~~~~~~~~l~~~g~~v~~g~  239 (320)
T cd08243         216 VGT--ATLKDSLRHLRPGGIVCMTGL  239 (320)
T ss_pred             CCh--HHHHHHHHHhccCCEEEEEcc
Confidence            874  344555666664457776664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=88.65  E-value=0.36  Score=40.36  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +||+|.+|..+++.|.+.|++|++++|++..
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            4789999999999999999999999987654

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=88.63  E-value=1.2  Score=35.40  Aligned_cols=91  Identities=16%  Similarity=0.166  Sum_probs=56.6

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      |++|.+|..+++.+...|.+|+++++...+.. .+.          ..++ .++..+-.+ .+.+..+....++|+++++
T Consensus       148 g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~-~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~  216 (327)
T PRK10754        148 AAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ-RAK----------KAGAWQVINYREENIVERVKEITGGKKVRVVYDS  216 (327)
T ss_pred             eCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------HCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEEC
Confidence            78899999999999899999999887765521 111          0122 222222112 2344555544579999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEee
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .+.  ......++.++...+++.++.
T Consensus       217 ~~~--~~~~~~~~~l~~~g~~v~~g~  240 (327)
T PRK10754        217 VGK--DTWEASLDCLQRRGLMVSFGN  240 (327)
T ss_pred             CcH--HHHHHHHHHhccCCEEEEEcc
Confidence            764  334455666665568887764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=88.56  E-value=1.3  Score=35.58  Aligned_cols=89  Identities=13%  Similarity=0.094  Sum_probs=52.8

Q ss_pred             cccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEEecC
Q 025908            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~~~   80 (246)
                      .|.+|..+++.+...|.+ |+++++++.+.. ...          ..++..+ .|..+  .+.+.++....++|+||++.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~-~~~----------~~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERLE-LAK----------ALGADFV-INSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHH----------HhCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            489999999999889987 998887765521 111          1122211 22222  33444444434799999998


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +... .....++.++...+++.++.
T Consensus       240 g~~~-~~~~~~~~l~~~G~~v~~g~  263 (339)
T cd08239         240 GNTA-ARRLALEAVRPWGRLVLVGE  263 (339)
T ss_pred             CCHH-HHHHHHHHhhcCCEEEEEcC
Confidence            7532 22344566664457776663

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK06545 prephenate dehydrogenase; Validated

Probab=88.52  E-value=0.39  Score=39.05  Aligned_cols=29  Identities=21%  Similarity=0.261  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|.++++.|.+.|++|.+..+++..
T Consensus         7 G~GliG~siA~~L~~~G~~v~i~~~~~~~   35 (359)
T PRK06545          7 GLGLIGGSLALAIKAAGPDVFIIGYDPSA   35 (359)
T ss_pred             EeCHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence            67999999999999999999998887665

>PRK06988 putative formyltransferase; Provisional

Probab=88.45  E-value=2.7  Score=33.48  Aligned_cols=77  Identities=14%  Similarity=0.179  Sum_probs=48.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEE-ccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |++..|....+.|++.+++|.++...+++...... .......+...++.++. .++.+.+ +.+.++..++|+++-.+.
T Consensus         9 Gs~~~a~~~L~~L~~~~~~i~~Vvt~~d~~~~~~~-~~~v~~~A~~~gip~~~~~~~~~~~-~~~~l~~~~~Dliv~~~~   86 (312)
T PRK06988          9 AYHNVGVRCLQVLLARGVDVALVVTHEDNPTENIW-FGSVAAVAAEHGIPVITPADPNDPE-LRAAVAAAAPDFIFSFYY   86 (312)
T ss_pred             eCcHHHHHHHHHHHhCCCCEEEEEcCCCCCccCcC-CCHHHHHHHHcCCcEEccccCCCHH-HHHHHHhcCCCEEEEehh
Confidence            56778999999999999988877766554222111 01112223346777776 4555544 455676678999886653

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=88.44  E-value=3  Score=35.31  Aligned_cols=69  Identities=12%  Similarity=-0.046  Sum_probs=46.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEE-Ec------cCCCHHHHHHhhhcCCccE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KG------DRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~------D~~~~~~~~~~~~~~~~d~   75 (246)
                      +.|.++..+++.+.+.|+++++++...+.......           .--+.+ .+      |+.|.+.+.++.+..++|+
T Consensus        12 ~~geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~-----------~aD~~~~i~p~~~~~~y~d~~~i~~~a~~~~~da   80 (467)
T PRK12833         12 NRGEIAVRIIRAARELGMRTVAACSDADRDSLAAR-----------MADEAVHIGPSHAAKSYLNPAAILAAARQCGADA   80 (467)
T ss_pred             CCcHHHHHHHHHHHHcCCeEEEEECCCCCCChhHH-----------hCCEEEecCCCCccccccCHHHHHHHHHHhCCCE
Confidence            45889999999999999999988765443211110           011112 12      6678888888888788999


Q ss_pred             EEecCCC
Q 025908           76 VYDINGR   82 (246)
Q Consensus        76 vi~~~~~   82 (246)
                      |+-..+.
T Consensus        81 I~pg~g~   87 (467)
T PRK12833         81 IHPGYGF   87 (467)
T ss_pred             EEECCCc
Confidence            9865543

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=88.42  E-value=2.7  Score=31.99  Aligned_cols=76  Identities=14%  Similarity=0.000  Sum_probs=48.4

Q ss_pred             hHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCCc-cc
Q 025908            8 GVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA-DE   86 (246)
Q Consensus         8 G~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~   86 (246)
                      ++.|++.|...+..+++.+-.... .+...           +....+.+=..+.+.+.+++++.++|.+|++..+-. .-
T Consensus        14 ar~la~~L~~~~~~~~~ss~t~~g-~~l~~-----------~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~i   81 (257)
T COG2099          14 ARALAKKLAAAPVDIILSSLTGYG-AKLAE-----------QIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARI   81 (257)
T ss_pred             HHHHHHHhhccCccEEEEEccccc-ccchh-----------ccCCeeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHH
Confidence            678889998888544444433322 22221           122255666678999999999999999999876532 23


Q ss_pred             hHHHHHhCC
Q 025908           87 VEPILDALP   95 (246)
Q Consensus        87 ~~~l~~a~~   95 (246)
                      .+|.+++|+
T Consensus        82 S~Na~~aak   90 (257)
T COG2099          82 SQNAARAAK   90 (257)
T ss_pred             HHHHHHHHH
Confidence            445555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	246
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-21
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-21
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-20
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-17
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	5e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	8e-15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-14
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-13
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-13
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	7e-13
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-12
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-12
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	4e-12
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	5e-12
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	7e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	5e-11
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-10
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-10
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-09
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-09
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	3e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	3e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-09
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-08
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-08
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	7e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	3e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	5e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 47/259 (18%), Positives = 81/259 (31%), Gaps = 46/259 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
           S+   Y     LP  E +   P   +   KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 218 EKYVTFDGLARACAKVTGY 236
              +T   +A       G 
Sbjct: 227 GDALTNYEVANTINNAFGN 245

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 88.9 bits (221), Expect = 5e-21
 Identities = 43/260 (16%), Positives = 72/260 (27%), Gaps = 43/260 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
           A         LP  E    D     K      K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 217 GEKYVTFDGLARACAKVTGY 236
           G   +    L R  A++ G 
Sbjct: 243 GH-NLEMADLTRRIAELLGQ 261

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 85.1 bits (211), Expect = 2e-20
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
              +  L   ++  V     P  +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 84.9 bits (210), Expect = 1e-19
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV   +   + +    I+ A+      +  + S  G           
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                  KS  + K      +E++G+ +T +      G   +                + 
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +   +      ++ + L     K   
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 236

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 82.8 bits (204), Expect = 2e-19
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
            T    P S  +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 82.3 bits (203), Expect = 2e-19
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
                       +VV D  G   DE E  + +L +L          + +    A    + 
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
            D     E+  +     +         LE         +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 53/256 (20%), Positives = 86/256 (33%), Gaps = 38/256 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------------EQFIYC 103
            D+  V   +     D V        D  +   D L N                 +F+Y 
Sbjct: 76  ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 104 SSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYGPLNY 160
            +A  Y +K    P       +P +      K   E  LE  G+++ + R   + GP N 
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNV 195

Query: 161 NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220
           +     FF RL  G+   +            VKDLARA V+ +  +      ++ S    
Sbjct: 196 SGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFSSGTD 250

Query: 221 VTFDGLARACAKVTGY 236
           V    L  A  +    
Sbjct: 251 VAIKELYDAVVEAMAL 266

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 77.7 bits (192), Expect = 1e-17
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
               +P       D   R         VL   G+ + ++ P      +   P+       
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
                    P   I         DL    ++ L  ++        S + 
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 79.1 bits (196), Expect = 1e-17
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 48/263 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ S++ VY ++ ++P  E     P S +   KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            G    +  + ++     +    + I G+G Q     ++ D   A +  L  ++    +F
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERV-NIF 227

Query: 214 NISGEKYVTFDGLARACAKVTGY 236
           NI  E  +    +A    +  G 
Sbjct: 228 NIGSEDQIKVKRIAEIVCEELGL 250

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 52/273 (19%), Positives = 84/273 (30%), Gaps = 51/273 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
               + F Y +S+  Y     LP  E     P S +   K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
                A  QV+NI+     + + L  A      
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 294

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 21/243 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+            
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121

Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
                E            K      +E+  + +T +      G      + +   H +  
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
              + I G G          D+    ++ + + +   +   I      ++   + +   +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 233 VTG 235
           ++ 
Sbjct: 239 LSE 241

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 78.0 bits (192), Expect = 4e-17
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
           ++ +  ++  K  D+V    GR   E +  I+ A+      +  + S  G+         
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117

Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
              D V+P  +  + K +   V+E++GV +T L      G   +                
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           + I G G          D+    ++   +     +  +I   K Y+T + +     K  G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 77.1 bits (190), Expect = 5e-17
 Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 38/247 (15%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY +
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
                  E      K    K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 229 ACAKVTG 235
             A   G
Sbjct: 226 WLADRQG 232

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 76.0 bits (188), Expect = 2e-16
 Identities = 59/268 (22%), Positives = 96/268 (35%), Gaps = 50/268 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ SS+ VY  +D++P  E +   P S +   K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 211 QVFNISGEKYVTFDGLARACAKVTGYCI 238
              N+     V    +A+  A+V G   
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRP 255

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 71.4 bits (175), Expect = 4e-15
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
               + V      K        +E+ G+ +T LRP +    L    + ++        R 
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
            P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 71.7 bits (175), Expect = 8e-15
 Identities = 50/276 (18%), Positives = 86/276 (31%), Gaps = 54/276 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
              +    Y         ++S   P+ E             L     E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           +    +  A  + FN+S      +    +  A+  G
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFG 271

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 68.4 bits (167), Expect = 9e-14
 Identities = 40/248 (16%), Positives = 90/248 (36%), Gaps = 18/248 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125

Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
                   +S  + K      +E+  + +T +             +             I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177

Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTGY 236
            I G+G     L + +D+A+  ++V  + +   ++      K  ++ + L       +G 
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237

Query: 237 CIAGCWIS 244
                 + 
Sbjct: 238 SFKKVHMP 245

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 52/268 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
             S+ GV+          + T+  P++     K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 210 --RQVFNISGEKYVTFDGLARACAKVTG 235
             R  +N++     T   L     +   
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIP 255

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 40/252 (15%), Positives = 89/252 (35%), Gaps = 34/252 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           LP         ++  + K      +E   + +T +                +        
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
             I + G+G     + + +D+    ++V  + +A  +  ++  S    +T   L     K
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEK 232

Query: 233 VTGYCIAGCWIS 244
             G       + 
Sbjct: 233 KIGKKFKKIHVP 244

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
            G     D  P      ++ +     K   +  L+   +++T +RP              
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171

Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              +    G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 47/274 (17%), Positives = 86/274 (31%), Gaps = 51/274 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
               + F Y +S+  Y     LP  E +  +P S     ++  ++  +    + G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              + A   ++N++     T + L+         
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 64.6 bits (158), Expect = 7e-13
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
           L+ +       D +     +  K   +  L +   +++T ++P  +              
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155

Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
                     +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 40/250 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY S       
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112

Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              +P        P       K   E+ +   G+  T +            P   +    
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169

Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
           +  G      P       +  L    D+  A +Q+  +  +K +     ++ E  ++   
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227

Query: 226 LARACAKVTG 235
           +  A ++   
Sbjct: 228 VCAAFSRALN 237

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 62.7 bits (152), Expect = 4e-12
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
                P          S+             + +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 50/288 (17%), Positives = 87/288 (30%), Gaps = 73/288 (25%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
                  +Y ++     +        T+  D  S H         K+  E       +  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              V+D+A   +     +     V+NI+  K  +   LA    ++TG 
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITGN 306

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 63.5 bits (154), Expect = 5e-12
 Identities = 36/252 (14%), Positives = 81/252 (32%), Gaps = 26/252 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
           + ++  L     D+V    G E+   +  ++ A           + G    +L S+    
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121

Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
            + +  DP       ++ K     ++E  G+ +T +    I     YN +       L  
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
                I G G          D+ +  ++ + + +   +  +       +  + LA    K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239

Query: 233 VTGYCIAGCWIS 244
             G  +    ++
Sbjct: 240 KIGRTLPRVTVT 251

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 62.9 bits (154), Expect = 7e-12
 Identities = 61/276 (22%), Positives = 99/276 (35%), Gaps = 58/276 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
            ++ S+ G +Y    +     ET    PKS +   K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI 238
           L    +   ++N+   +  T   +  A A+  G   
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAGKAP 263

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 63.0 bits (154), Expect = 7e-12
 Identities = 49/261 (18%), Positives = 84/261 (32%), Gaps = 43/261 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
            +A  Y +   +P        P + +   K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 219 KYVTFDGLARACAKVTGYCIA 239
            +   + +        G  +A
Sbjct: 248 GHSIKE-VFDVVLDYVGATLA 267

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 35/270 (12%), Positives = 68/270 (25%), Gaps = 65/270 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
                   ++  +   S G       L       +        K   E  L   G  +T 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
           +R   +                L  G+   +  +  +        D+A   +Q L  E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221

Query: 209 SRQVFNISGEKYVT---FDGLARACAKVTG 235
             + F++  +   T           ++VT 
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 52/314 (16%), Positives = 89/314 (28%), Gaps = 89/314 (28%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
               L            +   + G Y      P+ + +       H G+ +T        
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
                SK              G+  T L    +YG               L+Y+ V    
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
              F  +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++ 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 222 TFDGLARACAKVTG 235
             + LA    K   
Sbjct: 310 VNE-LASLVTKAGS 322

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 59.1 bits (143), Expect = 1e-10
 Identities = 42/217 (19%), Positives = 69/217 (31%), Gaps = 29/217 (13%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             L +     G D V    G +      I           Y S+  VY   D     ET 
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
            + P + R + ++   +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                QV    HV+D+A+     +        V+N+ 
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVC 208

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 32/187 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
           DY+  +S   A  G   +  I+G   D    I+     ++       AGV    Y     
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
               E   +     H     TE  + +  + +T LR         Y    V E      +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157

Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
           +G  +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211

Query: 229 ACAKVTG 235
             ++V+G
Sbjct: 212 ILSEVSG 218

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
             + SS  V+  +    +    T+  P + + G  K   E   E      GV+  S+R  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
            +                  F++  A +      S      + ++ D   A + ++    
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 205 NEKASRQVFNISG 217
            +      +N++ 
Sbjct: 232 EKIKIHSSYNLAA 244

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 35/231 (15%), Positives = 74/231 (32%), Gaps = 37/231 (16%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
            KG D V  I              +P +E  +Y    +GV    ++        + +   
Sbjct: 63  FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115

Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184
             S + G      +L + G+++T +R         Y    + +   L     +  P    
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167

Query: 185 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           ++       D+AR  + ++ N     + + +SG  Y     LA   ++ +G
Sbjct: 168 RIN-YITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 71/273 (26%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
                  + + +  S+  VY ++D LP  E   + P+S +   K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
               +    V N    + ++ + + R     + 
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSP 254

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 45/274 (16%), Positives = 93/274 (33%), Gaps = 55/274 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
            + IY SSAGVY  +   P+       P++ + G  KL  +  +   S       LR  Y
Sbjct: 131 AKVIYASSAGVYGNTK-APNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186

Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
             +YGP          +         A + + +   G Q    V    +++D+ +A V+ 
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           +  +K+   V+N+   +  +++ +     +  G 
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLGD 274

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 43/270 (15%), Positives = 73/270 (27%), Gaps = 56/270 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVLGN 205
           YGP      +   V      +L  G  P    GS           +V D+A   +  L  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL-- 225

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTG 235
           E     +FN+   +  +F  +A A      
Sbjct: 226 ENGVSGIFNLGTGRAESFQAVADATLAYHK 255

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 46/273 (16%), Positives = 85/273 (31%), Gaps = 54/273 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
           Y SSA +Y +   L               +P+      KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
             +   R+  NI  ++ V+ + +A         
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEEK 292

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 55/256 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
           +   +       H +           GK   E      GV  TS+R    +     N + 
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162

Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
            +   +   G+     +P     +       V DL    + +L   EK   Q   +S   
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218

Query: 220 YVTFDGLARACAKVTG 235
             T +  A    K T 
Sbjct: 219 RHTAEEYAALLTKHTR 234

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 39/282 (13%), Positives = 70/282 (24%), Gaps = 67/282 (23%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
                  + ++ SS  V+      P  +     P +     K     E +L         
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185

Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
           +   +R   I             +             G+   +P            +   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
              +        +   R+  ++ G    T      A  KV G
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAG 283

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 44/271 (16%), Positives = 74/271 (27%), Gaps = 58/271 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 53  GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 102

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 103 FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 157

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 204
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 205 NEKASRQVFNISGEKYVTFDGLARACAKVTG 235
            E     +FN+   +  +F  +A A      
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHK 302

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 32/218 (14%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
           S+ L            + KG++    V E K   ++  RP  +      +   EW   + 
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
                +P   +         V  + RA +  +   +  
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRDK 220

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
           DY    +  SA +G + +  I+    G+ A +   +++A           +AGV    Y 
Sbjct: 52  DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            S  L H +T  +     H     TE +L   G+ +T LR  +      Y+         
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150

Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                      G G          D A A  +V+       +V+ ++G+   T   LA  
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208

Query: 230 CAKVTG 235
             K +G
Sbjct: 209 LTKQSG 214

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 50.4 bits (121), Expect = 7e-08
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117

Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
                        D KS     R KG+L  +++ E      T  RP  ++GP       E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157

Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            F        PI   +PG    +       DLARA  ++   E    +  
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 42/252 (16%), Positives = 70/252 (27%), Gaps = 53/252 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+         
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97

Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
                      + + + KL  E +L    E  G      R   ++G     NYN V   F
Sbjct: 98  --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
            +++     I +         L +V D+     + + G       V  +     VT   +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208

Query: 227 ARACAKVTGYCI 238
                K     +
Sbjct: 209 VDLLYKFKQSRL 220

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L    H+V L           +   + +   E       +  D  D 
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
             V   +  K  D +  +       VE P  D L           E        + ++ S
Sbjct: 55  QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
           S                    P S +   K   E +         +   ++R    +   
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169

Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
            +   +  W           R    P  G  V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 30/257 (11%), Positives = 57/257 (22%), Gaps = 64/257 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L      + L            P +      E       ++ D  D 
Sbjct: 10  GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
           + V + +   G D +       +       ++        + +A       + ++ SS  
Sbjct: 56  NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113

Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
                             P   + G  K   E++     +  G     +R       P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
           Y  +  WF H                        D       V         V   +   
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASAN 209

Query: 220 YVTFDGLARACAKVTGY 236
                    +     G+
Sbjct: 210 --DAGWWDNSHLGFLGW 224

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 205 NEKASR-QVFNISG 217
           N    R   FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKG 56
           G    +G  L+  L   GH+V    R +    ++   P     +  + +  ++HL G
Sbjct: 154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	246
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.98
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.98
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.98
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.98
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.97
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.97
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.85
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.85
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.84
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.83
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.82
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.81
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.8
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.8
1spx_A	278	Short-chain reductase family member (5L265); paral	99.8
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.79
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.79
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.79
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.79
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.79
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.78
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.78
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.78
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.78
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.78
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.78
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.77
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.77
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.77
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.77
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.76
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.76
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.76
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.76
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.76
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.76
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.76
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.76
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.76
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.75
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.75
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.74
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.74
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.74
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.74
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.74
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.74
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.74
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.74
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.74
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.74
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.74
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.74
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.73
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.73
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.73
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.73
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.73
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.73
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.73
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.73
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.73
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.73
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.73
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.73
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.73
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.73
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.72
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.72
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.72
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.72
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.72
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.72
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.72
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.72
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.72
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.72
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.72
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.72
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.72
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.71
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.71
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.71
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.71
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.71
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.71
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.71
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.71
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.71
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.71
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.71
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.71
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.71
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.71
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.71
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.71
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.7
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.7
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.7
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.7
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.7
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.7
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.7
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.7
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.7
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.7
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.69
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.69
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.69
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.69
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.69
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.69
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.69
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.69
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.69
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.69
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.69
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.69
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.68
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.68
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.68
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.68
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.68
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.68
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.67
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.67
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.67
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.67
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.67
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.67
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.67
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.66
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.66
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.66
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.66
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.66
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.65
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.65
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.65
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.65
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.65
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.64
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.64
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.64
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.64
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.64
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.64
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.64
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.64
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.64
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.64
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.63
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.63
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.63
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.63
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.62
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.62
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.62
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.61
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.61
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.61
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.61
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.6
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.59
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.59
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.58
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.58
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.57
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.57
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.56
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.56
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.56
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.55
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.55
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.54
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.54
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.54
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.53
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.53
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.53
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.52
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.52
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.52
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.49
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.46
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.45
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.45
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.43
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.41
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.35
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.34
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.3
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.3
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.19
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.17
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.08
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.08
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.91
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.87
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.8
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.75
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.71
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.69
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.67
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.64
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.57
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.46
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.2
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.19
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.15
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.13
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.03
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.95
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.89
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.87
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.85
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.84
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.79
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.67
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.65
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.63
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.63
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.49
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.49
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.41
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.41
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.36
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.19
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.16
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.14
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.11
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.11
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.05
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.04
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.77
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.66
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.65
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.64
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.59
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.58
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.58
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.55
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.53
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.41
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.31
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.3
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.29
1lnq_A	336	MTHK channels, potassium channel related protein;	96.28
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.26
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.19
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.16
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.16
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.15
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.08
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.95
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.94
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	95.94
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.67
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.62
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.57
3gms_A	340	Putative NADPH:quinone reductase; structural genom	95.57
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.51
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.48
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.41
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.35
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.35
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	95.29
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.23
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.16
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.16
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.1
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.0
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.99
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.95
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	94.93
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.85
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	94.72
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.62
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.55
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.43
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.43
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	94.4
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.39
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	94.36
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.3
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	94.29
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.28
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.21
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.19
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.19
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	94.15
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.07
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.03
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	93.95
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	93.93
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	93.9
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	93.87
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	93.82
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	93.82
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	93.75
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	93.72
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	93.71
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	93.65
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	93.65
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	93.62
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	93.58
2duw_A	145	Putative COA-binding protein; ligand binding prote	93.56
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	93.53
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	93.52
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	93.48
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.45
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	93.4
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.39
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	93.38
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	93.37
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.37
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	93.27
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.24
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.23
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	93.19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	93.14
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	93.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	93.1
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	93.09
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.04
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.01
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	92.96
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	92.96
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	92.94
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	92.9
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	92.89
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	92.84
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	92.8
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	92.78
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	92.77
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.73
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	92.71
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	92.68
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	92.66
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	92.66
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	92.63
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	92.62
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.61
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	92.61
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	92.61
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	92.48
4g65_A	461	TRK system potassium uptake protein TRKA; structur	92.44
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	92.43
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.41
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	92.37
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	92.37
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	92.36
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	92.33
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	92.26
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	92.26
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	92.26
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	92.19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	92.14
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	92.12
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	91.97
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	91.97
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	91.88
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	91.87
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	91.77
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	91.71
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	91.63
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	91.57
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	91.52
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	91.48
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	91.46
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	91.43
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	91.42
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	91.36
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	91.35
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	91.35
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	91.23
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	91.21
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	91.19
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	91.19
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	91.1
3l07_A	285	Bifunctional protein fold; structural genomics, ID	91.06
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	91.0
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	90.95
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	90.93
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	90.91
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	90.9
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	90.86
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	90.84
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	90.81
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	90.8

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=7.2e-38  Score=246.08  Aligned_cols=226  Identities=21%  Similarity=0.261  Sum_probs=196.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|++|++.|+++|++|++++|++.. .. +            .+++++.+|+. .+++.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999998333 11 1            37899999999 999999998  999999999


Q ss_pred             CCCc------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh----
Q 025908           81 GREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----  141 (246)
Q Consensus        81 ~~~~------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~----  141 (246)
                      +...            .++.+++++|+  ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|+++++    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            8632            34678899877  7889999999999998777889999999998887 999999998864    


Q ss_pred             cCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      .+++++++||+.+|||+... .++..++..+..+.++.+++++...+++++++|+|++++.+++++. .+++||++++++
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            79999999999999997543 5677788888888888888888899999999999999999998876 678999999999


Q ss_pred             ecHHHHHHHHHHHhCCCcceeecC
Q 025908          221 VTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       221 ~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +|+.|+++.+++.+|.+.++...|
T Consensus       230 ~s~~e~~~~i~~~~g~~~~~~~~~  253 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKDNLLVKN  253 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTTCEEECS
T ss_pred             ccHHHHHHHHHHHhCCCCcceecC
Confidence            999999999999999987776654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=7.6e-38  Score=249.92  Aligned_cols=235  Identities=19%  Similarity=0.198  Sum_probs=195.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|........+.............+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  108 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDHVLHQA  108 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCEEEECC
Confidence            799999999999999999999999999876522111000000000001689999999999999999998  999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..                ..++.+++++|.  ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|++++ 
T Consensus       109 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  188 (351)
T 3ruf_A          109 ALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQV  188 (351)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHH
Confidence            862                335678898877  7889999999999998888889999999988887 99999999875 


Q ss_pred             ---hcCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC-CCCCCe
Q 025908          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQ  211 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~~~~~~  211 (246)
                         +.+++++++||+.+|||+...     .++..++..+..+.++.+++++.+.++++|++|+|++++.++.+ +...++
T Consensus       189 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  268 (351)
T 3ruf_A          189 YARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDN  268 (351)
T ss_dssp             HHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCC
Confidence               469999999999999997532     46677888888888888888889999999999999999999987 345688


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +||+++++++|+.|+++.+++.+|.+
T Consensus       269 ~~ni~~~~~~s~~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          269 IYNVAVGDRTTLNELSGYIYDELNLI  294 (351)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred             EEEeCCCCcccHHHHHHHHHHHhCcc
Confidence            99999999999999999999999983

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.9e-38  Score=251.36  Aligned_cols=227  Identities=19%  Similarity=0.262  Sum_probs=193.1

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-CHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++ |++|++++|+..+......          ..+++++.+|++ |.+.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998766322221          268999999999 9999999998  9999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-------CCCCcc-ccH
Q 025908           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (246)
                      +|+..                +.++.+++++|+  + ++|||+||.++||.....+++|+.+.       .|.+.| .+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                345678999987  7 99999999999998777777777754       455556 999


Q ss_pred             HHHHHHHHhc---CCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       133 ~~~e~~~~~~---~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ..+|++++..   +++++++||+.+|||+..         ..++..++..+..+.++.+++++.+.+++++++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999998765   899999999999999743         2366778888888888888888889999999999999999


Q ss_pred             HHhcCCC--CCCeeEEeeCC-eeecHHHHHHHHHHHhCCCcce
Q 025908          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~-~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      .+++++.  ..+++||++++ +++|+.|+++.+.+.+|.+.+.
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~  299 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEY  299 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTT
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccc
Confidence            9998764  46899999994 8999999999999999876543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-36  Score=242.55  Aligned_cols=232  Identities=17%  Similarity=0.239  Sum_probs=194.4

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||||++|++.|+++|  ++|++++|..... ...+...      ....+++++.+|+.|.+.+.+++++.++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI------QDHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT------TTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh------ccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999  6788888765331 1111110      01368999999999999999999855699999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccC-CCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           78 DINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      |+++...                .++.+++++|+  ++++|||+||.++|+.. ...+++|+.+..|.+.| .+|..+|+
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            9998632                24678888877  78999999999999875 45688999999988877 99999999


Q ss_pred             HHHh----cCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCee
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (246)
                      +++.    .+++++++||+.+|||+.. ..++..++..+..+.++.+++++...+++|+++|+|++++.+++++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8864    6999999999999999754 35677788888888888888888899999999999999999998776 6789


Q ss_pred             EEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          213 FNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       213 ~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      ||+++++++++.|+++.+.+.+|.+.+
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCcc
Confidence            999999999999999999999998765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3e-37  Score=242.65  Aligned_cols=229  Identities=22%  Similarity=0.265  Sum_probs=190.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|.........           ..+++++.+|+.|.+ +.++++  + |+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876633222           267899999999988 888887  5 9999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +..                ..++.+++++|+  ++++||++||.++|+.....+.+|+.+..|.+.| .+|..+|++++.
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            852                224667888877  7889999999999998887889999998888888 999999998754


Q ss_pred             ----cCCceEEeecceeeCCCCCCchHHHHHHHHHhC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CCCCCeeE
Q 025908          142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  213 (246)
Q Consensus       142 ----~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~  213 (246)
                          .+++++++||+++|||+.....+..++..+..+ ..+..++++.+.++++|++|+|++++.++++   +...+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence                599999999999999986666666777777666 4566778888999999999999999999987   44567899


Q ss_pred             EeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          214 NISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       214 ~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+++++++|+.|+++.+.+.+|.+.++..+|
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  261 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRPEIRLVP  261 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCCEEEEC-
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCCceeecC
Confidence            9999999999999999999999887665543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.7e-37  Score=246.34  Aligned_cols=226  Identities=21%  Similarity=0.286  Sum_probs=194.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|....                 .+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998655                 468889999999999999998  999999999


Q ss_pred             CCC--------------ccchHHHHHhCC--CCceEEEEeecceecc--CCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..              +.++.+++++|.  ++++|||+||.++|+.  ....+++|+.+..|.+.| .+|..+|++++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            863              234678888876  7889999999999987  566788999998888877 99999999885 


Q ss_pred             ---hcCCceEEeecceee-------------CCCCC------------CchHHHHHHHHHhCCCcccCCCCCceeee---
Q 025908          141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  189 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  189 (246)
                         +.+++++++||+.+|             ||+..            ..++..++.....+.++.+++++...+++   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               468999999999999             77521            34556677777778777777788888888   


Q ss_pred             -eeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecCC
Q 025908          190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWISG  245 (246)
Q Consensus       190 -i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p~  245 (246)
                       ++++|+|++++.+++++...+++||+++++++|+.|+++.+.+.+|.+.+...+|.
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~  302 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPG  302 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSS
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCC
Confidence             99999999999999887556889999999999999999999999999877765553

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-36  Score=237.27  Aligned_cols=227  Identities=20%  Similarity=0.264  Sum_probs=189.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++| .++++++........+           ..+++++.+|+.+ +++.++++  ++|+|||++
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5556665544322222           2678999999999 88999998  999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..                ..++.+++++|.  ++++||++||..+||.....+.+|+.+..|.+.| .+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            852                224667888876  7889999999999998888889999988888877 99999999875 


Q ss_pred             ---hcCCceEEeecceeeCCCCCCchHHHHHHHHHhC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEee
Q 025908          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~  216 (246)
                         +.+++++++||+.+|||+.....+..++..+..+ ..+.+++++.+.++++|++|+|++++.+++.. ..+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEEC
Confidence               4689999999999999987666677777777666 45667788889999999999999999999843 457899999


Q ss_pred             CCeeecHHHHHHHHHHHhCCCcceeec
Q 025908          217 GEKYVTFDGLARACAKVTGYCIAGCWI  243 (246)
Q Consensus       217 ~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (246)
                      +++++|+.|+++.+++.+|.+.++...
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~~~~~~  257 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSPRFRFT  257 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCCEEEEC
T ss_pred             CCCCeeHHHHHHHHHHHhCCCCceEEC
Confidence            999999999999999999987665543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.8e-35  Score=238.21  Aligned_cols=231  Identities=18%  Similarity=0.250  Sum_probs=182.9

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||+||++|++.|+++| ++|++++|........+..         ..+++++.+|+.|++.+.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999987653222221         2579999999999999999998  99999999


Q ss_pred             CCCCc----------------cchHHHHHhCC---CCceEEEEeecceeccCCCCCCC--CCC---CC-CCCCcc-ccHH
Q 025908           80 NGREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL  133 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~--e~~---~~-~~~~~~-~~k~  133 (246)
                      ++...                .++.+++++|.   ++++||++||.++|+.....+++  |+.   +. .|.+.| .+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            98642                34678888876   46899999999999876665677  776   55 666667 9999


Q ss_pred             HHHHHHHh----cCCceEEeecceeeCCCC---------C-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       134 ~~e~~~~~----~~~~~~ilR~~~i~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      .+|.+++.    .+++++++||+.+|||..         .     ..++..++..+..+.++.+++++.+.+++++++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998854    589999999999999975         2     34566777778888877777888889999999999


Q ss_pred             HHH-HHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       196 a~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |++ ++.+++++. .+ +||+++++++|+.|+++.+.+.+|.+.++.+.|
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p  314 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELDRLP  314 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCC
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCC
Confidence            999 999998765 56 999999999999999999999999876655444

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-35  Score=237.45  Aligned_cols=237  Identities=18%  Similarity=0.203  Sum_probs=191.5

Q ss_pred             CCccccchHHHHHHHHH--CCCeEEEEecCCCcccc--CCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~--~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~   75 (246)
                      ||||||||++|++.|++  .|++|++++|.......  ...............++.++.+|++|++.+.++ ..  ++|+
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~   93 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY   93 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence            79999999999999999  89999999997652100  000000000011135789999999999999988 54  9999


Q ss_pred             EEecCCCC--------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        76 vi~~~~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      |||+|+..              +.++.+++++|+  +++ ||++||.++||.... +.+|+.+..|.+.| .+|..+|.+
T Consensus        94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A           94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence            99999853              235678888877  565 999999999997766 88999999998888 999999999


Q ss_pred             HHhcC--CceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       139 ~~~~~--~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      ++...  ++++++||+++|||+...     .++..++..+..+.++.+++++.+.+++++++|+|++++.+++.+. .+ 
T Consensus       172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g-  249 (362)
T 3sxp_A          172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG-  249 (362)
T ss_dssp             HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred             HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence            98754  889999999999997532     4567778888888888877888889999999999999999998765 45 


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +||+++++++|+.|+++.+.+.+| +.++...|
T Consensus       250 ~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~  281 (362)
T 3sxp_A          250 VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIK  281 (362)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC
T ss_pred             EEEeCCCCCccHHHHHHHHHHHcC-CCceEECC
Confidence            999999999999999999999999 76665554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.8e-35  Score=233.43  Aligned_cols=228  Identities=17%  Similarity=0.169  Sum_probs=188.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|+... ..              .+++++.+|++|++.+.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              16888999999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC---CCceEEEEeecceeccC--CCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      +...                .++.+++++|+   ++++||++||..+|+..  ...+++|+.+..|.+.| .+|..+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            8642                23667888875   48899999999999875  56678898888887777 999999998


Q ss_pred             HHh----cCCceEEeecceeeCCCCCC-chHHHHHHHHHh---C--CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       139 ~~~----~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      ++.    .+++++++||+++|||+... .....++..+..   +  .++..++++...+++++++|+|++++.+++++ .
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-K  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-C
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-C
Confidence            865    38999999999999997543 345556655555   6  45556677778899999999999999999766 3


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      .+++||+++++.+|+.|+++.+.+.+|.+.+....|
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p  277 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNP  277 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecc
Confidence            578999999999999999999999999876655544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2e-35  Score=234.98  Aligned_cols=239  Identities=18%  Similarity=0.221  Sum_probs=190.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||+||+++++.|+++|++|++++|+.........     ... ....+++++.+|++|++++.+++++.++|+|||+
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIA-----RIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHH-----HHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHH-----HHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            7999999999999999999999999998765321110     000 0135789999999999999999987789999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~  140 (246)
                      |+...                .++.+++++|+  ++++||++||..+||.....+.+|+.+..|.+.| .+|..+|++++
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  165 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR  165 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            98642                24667888876  6789999999999998877889999998888877 99999999886


Q ss_pred             h----c-CCceEEeecceeeCCCCC-----------CchHHHHHHHHHhC-CCcccCC------CCCceeeeeeHHHHHH
Q 025908          141 S----K-GVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  197 (246)
Q Consensus       141 ~----~-~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~  197 (246)
                      .    . +++++++||+++|||...           ..+...+....... ..+.+++      ++.+.++++|++|+|+
T Consensus       166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~  245 (341)
T 3enk_A          166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR  245 (341)
T ss_dssp             HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence            4    3 499999999999998531           23344333333322 3444445      7788999999999999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++.++++  +...+++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus       246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  294 (341)
T 3enk_A          246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVA  294 (341)
T ss_dssp             HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCC
Confidence            99999876  234578999999999999999999999999987765544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-35  Score=233.66  Aligned_cols=233  Identities=18%  Similarity=0.271  Sum_probs=187.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||+++++.|+++|++|++++|........+           ..+++++.+|+.|.+.+.+++++.++|+|||++
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999999765532222           137889999999999999999766899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.+++++|.  ++++||++||.++|+.....+++|+.+..|.+.| .+|..+|++++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            8642                24667888876  7889999999999987767788999888887777 999999998754


Q ss_pred             ----cCCceEEeecceeeCCCC----------CCchHHHHHHHHHh-CCCcccCC------CCCceeeeeeHHHHHHHHH
Q 025908          142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       142 ----~~~~~~ilR~~~i~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~~~  200 (246)
                          .+++++++||+++|||+.          ...++..++..... +..+.+++      ++.+.++++|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                589999999999999852          12344444444432 23454444      5677899999999999999


Q ss_pred             HHhcCCCC--CCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       201 ~~~~~~~~--~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      .+++++..  .+++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  281 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAP  281 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCC
Confidence            99875422  368999999999999999999999999887665443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=2.1e-35  Score=231.99  Aligned_cols=230  Identities=22%  Similarity=0.240  Sum_probs=187.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|+||+++++.|+++|++|++++|........+           ..+++++.+|++|++.+.+++++.++|+|||++
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999998543322111           146788999999999999999755899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeec-ceecc-CCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~-~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +...                .++.+++++|.  ++++||++||. .+|+. ....+.+|+.+..|...| .+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            8632                24567888876  77899999998 88986 455678888887777777 9999999987


Q ss_pred             H----hcCCceEEeecceeeCCCCCC----chHHHHHHHHHhCCCcccC-----CCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          140 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       140 ~----~~~~~~~ilR~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      +    +.+++++++||+++|||+...    .++..++..+..+.++.++     +++.+.++++|++|+|++++.+++++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            5    368999999999999997532    3455666777777776665     77778899999999999999998764


Q ss_pred             CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                         +++||+++++++|+.|+++.+.+.+|.+.+..+.|
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  269 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAP  269 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCC
Confidence               68999999999999999999999999887665544

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=5.9e-36  Score=232.50  Aligned_cols=215  Identities=20%  Similarity=0.186  Sum_probs=183.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      || +||+|++|++.|+++|++|++++|+..+.               ..+++++.+|+.|.+.+.++++. ++|+|||++
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a   71 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV   71 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence            68 59999999999999999999999987652               26889999999999999999972 499999998


Q ss_pred             CC-----------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhcCCce
Q 025908           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (246)
Q Consensus        81 ~~-----------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~  146 (246)
                      +.           +..++.+++++|+  ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|++ ++. +++
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            64           3456889999987  7899999999999998887888999999988888 999999999 777 999


Q ss_pred             EEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeeecHH
Q 025908          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTFD  224 (246)
Q Consensus       147 ~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s~~  224 (246)
                      +++||+.+|||+..     .++..+.. .  ..++++...+++++++|+|++++.+++++  ...+++||+++++++|+.
T Consensus       150 ~ilR~~~v~G~~~~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          150 TILRFSGIYGPGRL-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             EEEEECEEEBTTBC-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             EEEecccccCCCch-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99999999999643     23344434 2  23367778899999999999999999874  346789999999999999


Q ss_pred             HHHHHHHHHhCCCcceee
Q 025908          225 GLARACAKVTGYCIAGCW  242 (246)
Q Consensus       225 ~l~~~~~~~~g~~~~~~~  242 (246)
                      |+++.+++.+|.+.+...
T Consensus       222 e~~~~i~~~~g~~~~~~~  239 (286)
T 3gpi_A          222 DLLRWLADRQGIAYPAGA  239 (286)
T ss_dssp             HHHHHHHHHTTCCCCCSC
T ss_pred             HHHHHHHHHcCCCCCCCC
Confidence            999999999998766543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.6e-35  Score=233.39  Aligned_cols=236  Identities=21%  Similarity=0.206  Sum_probs=190.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++|++|++++|+.......+... ...... ...+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            799999999999999999999999999765311111000 000000 02578999999999999999998  99999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~  140 (246)
                      ++..                ..++.+++++|.  ++++||++||.++|+.....+.+|+.+..|.+.| .+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                234677888876  7889999999999998777788899888888777 89999999875


Q ss_pred             ----hcCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-CCCC
Q 025908          141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  210 (246)
Q Consensus       141 ----~~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~  210 (246)
                          +.+++++++||+.+|||....     ..+..++..+..+.++.+++++.+.+++++++|+|++++.++... ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     345667777777877777788888999999999999999988763 3467


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHh---CCCcc
Q 025908          211 QVFNISGEKYVTFDGLARACAKVT---GYCIA  239 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~---g~~~~  239 (246)
                      ++||+++++++|+.|+++.+.+.+   |.+.+
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence            899999999999999999999999   87755

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.4e-35  Score=233.12  Aligned_cols=223  Identities=17%  Similarity=0.186  Sum_probs=180.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|++|++.|+++|++|++++|+..+.. .+.          ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-RLA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-GGG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-hhc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876531 111          1478999999999999999998  899999999


Q ss_pred             CCCc--------------cchHHHHHhCC--CCceEEEEeecceeccCCC--CCCCCCCCCCC----CCcc-ccHHHHHH
Q 025908           81 GREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~----~~~~-~~k~~~e~  137 (246)
                      +...              .++.+++++|.  ++++||++||.++|+....  .+ +|+.+..|    .+.| .+|..+|+
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence            8532              24678888877  7899999999999986543  44 88888887    6667 99999999


Q ss_pred             HHHh---cCCceEEeecceeeCCCC-CCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeE
Q 025908          138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (246)
Q Consensus       138 ~~~~---~~~~~~ilR~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (246)
                      +++.   .+++++++||+.+|||.. ... +..++..+..+....+   +...+++++++|+|++++.+++++.. +++|
T Consensus       165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            8864   389999999999999975 323 4456666666665544   45788999999999999999987654 7899


Q ss_pred             EeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          214 NISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       214 ~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+++++ +|+.|+++.+.+.+|.+.+. .+|
T Consensus       240 ~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p  268 (342)
T 2x4g_A          240 LLTGHN-LEMADLTRRIAELLGQPAPQ-PMS  268 (342)
T ss_dssp             EECCEE-EEHHHHHHHHHHHHTCCCCE-EEC
T ss_pred             EEcCCc-ccHHHHHHHHHHHhCCCCCC-cCC
Confidence            999999 99999999999999987665 443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-35  Score=229.79  Aligned_cols=212  Identities=14%  Similarity=0.112  Sum_probs=183.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||+++++.|+++|++|++++|.                          .+|+.|.+.+.+++++.++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999982                          26889999999999866799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.+++++|+  ++ +|||+||.++|+.....+++|+++..|.+.| .+|..+|++++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            8642                24677888877  65 7999999999998877889999999998887 999999999999


Q ss_pred             cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeee
Q 025908          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~  221 (246)
                      ...+++++||+.+|||+. ..+...++..+..+.++.+.++  +.++++|++|+|++++.+++++.  +++||+++++++
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999964 3456677777777777777654  78999999999999999998876  679999999999


Q ss_pred             cHHHHHHHHHHHhCCCcceeecC
Q 025908          222 TFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       222 s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+.|+++.+++.+|.+.++.++|
T Consensus       219 s~~e~~~~i~~~~g~~~~~~~~~  241 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKVNVLPVS  241 (287)
T ss_dssp             EHHHHHHHHHHHHTCCCEEEEEC
T ss_pred             cHHHHHHHHHHHcCCCcceeeee
Confidence            99999999999999887665543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=9.3e-35  Score=231.46  Aligned_cols=226  Identities=19%  Similarity=0.242  Sum_probs=183.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||+++++.|+++ |++|++++|+..+......          ..+++++.+|+.| .+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998766322222          2579999999998 466888887  8999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-------CCCCcc-ccH
Q 025908           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (246)
                      +++...                .++.+++++|.  + ++||++||.++|+.....+++|+.+.       .|.+.| .+|
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK  152 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence            998642                24567888876  5 89999999999987666667777653       233356 899


Q ss_pred             HHHHHHHH----hcCCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       133 ~~~e~~~~----~~~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      ..+|++++    +.+++++++||+.+|||+..         ...+..++..+..+.++.+++++.+.++++|++|+|+++
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            99999874    46899999999999999743         234566777777888777777778899999999999999


Q ss_pred             HHHhcCCC--CCCeeEEeeCCe-eecHHHHHHHHHHHhCCCcc
Q 025908          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~-~~s~~~l~~~~~~~~g~~~~  239 (246)
                      +.+++++.  ..+++||+++++ ++|+.|+++.+.+.+|.+..
T Consensus       233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            99998753  457899999986 89999999999999987644

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=3.8e-34  Score=227.32  Aligned_cols=229  Identities=21%  Similarity=0.319  Sum_probs=188.4

Q ss_pred             CCccccchHHHHHHHHHC---C---CeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~---g---~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   73 (246)
                      ||||||||++|++.|+++   |   ++|++++|..... ...+...      ....+++++.+|++|++.+.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV------DADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG------TTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc------ccCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999997   8   9999999975321 1111100      002578999999999999999996  99


Q ss_pred             cEEEecCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           74 DVVYDINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        74 d~vi~~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      |+|||+++...                .++.+++++|.  ++++||++||.++||.....+++|+.+..|.+.| .+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            99999998642                34678888876  7789999999999987656678888888887777 99999


Q ss_pred             HHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       135 ~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +|.+++    +.+++++++||+.+|||... ..++..++..+..+..+.+++++.+.+++++++|+|++++.+++++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            999875    35899999999999999754 34566677777777777777888889999999999999999997654 5


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +++||+++++++|+.|+++.+.+.+|.+.
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCc
Confidence            78999999999999999999999999875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.8e-34  Score=232.56  Aligned_cols=229  Identities=19%  Similarity=0.251  Sum_probs=186.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|+..+.... .          ..+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-D----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-G----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-c----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            79999999999999999999999999987652211 1          2578999999999999999997  999999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCceEEEEeecceeccCCC-----CCCCCCC--CCCCCCcc-ccHH
Q 025908           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL  133 (246)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~-----~~~~e~~--~~~~~~~~-~~k~  133 (246)
                      +...                 .++.+++++|.  ++++||++||.++|+....     .+++|++  +..|...| .+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            8532                 13567888876  7889999999999985322     3356665  45566666 8999


Q ss_pred             HHHHHHH----hcCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       134 ~~e~~~~----~~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|.+++    +.+++++++||+.+|||+...     .....++..+..+.+ +.+++++.+.+++++++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9999874    358999999999999997432     256667777766765 666788888999999999999999999


Q ss_pred             cCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++  .+++||+++++.+|+.|+++.+.+.+|.+.+..++|
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p  300 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP  300 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCC
Confidence            875  467999999999999999999999999887766555

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.6e-35  Score=232.06  Aligned_cols=222  Identities=15%  Similarity=0.192  Sum_probs=182.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|+      +....                ..+++.+.+|+.|.+.+.+++++.++|+|||++
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      21111                234555678999999999999865699999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC----CCCCCCc-c-ccHHHH
Q 025908           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT  135 (246)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~~~  135 (246)
                      +...                 .++.+++++|+  ++++|||+||.++|+.....+++|+.    +..|..+ | .+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            8732                 24667888876  78899999999999988888888887    6666663 5 899999


Q ss_pred             HHHHHh----cCCceEEeecceeeCCCCC-----CchHHHHHHH----HHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       136 e~~~~~----~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      |++++.    .+++++++||+++|||+..     ..++..++..    +..+.++.+++++.+.++++|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            998753    7999999999999999753     2355555555    67888888888889999999999999999999


Q ss_pred             hcCC-CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          203 LGNE-KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       203 ~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++++ ...+++||+++++++|+.|+++.+.+.+|.+.++...|
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  272 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDT  272 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEET
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCC
Confidence            9764 34567999999999999999999999999887765543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3.7e-34  Score=228.32  Aligned_cols=243  Identities=20%  Similarity=0.222  Sum_probs=186.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccC--CCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||||+||+++++.|+++|++|++++|........  ... ....... ...+++++.+|++|.+++.+++++.++|+||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   86 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPE-SLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVI   86 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBH-HHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHH-HHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            79999999999999999999999999865431000  000 0000111 1247899999999999999999755899999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCC-CCcc-ccHHHHHH
Q 025908           78 DINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTES  137 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~e~  137 (246)
                      |+++...                .++.+++++|+  ++++||++||..+|+.....+++|+.+..| ...| .+|..+|.
T Consensus        87 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~  166 (348)
T 1ek6_A           87 HFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEE  166 (348)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHH
Confidence            9998642                24667888876  778999999999998777778889888777 5666 99999999


Q ss_pred             HHHhc---C--CceEEeecceeeCCCC-----------CCchHHHHHHHHH-hCCCcccCC------CCCceeeeeeHHH
Q 025908          138 VLESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKD  194 (246)
Q Consensus       138 ~~~~~---~--~~~~ilR~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D  194 (246)
                      +++..   +  ++++++||+++|||..           ...+...+..... .+..+.+++      ++.+.+++||++|
T Consensus       167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  246 (348)
T 1ek6_A          167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD  246 (348)
T ss_dssp             HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred             HHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHH
Confidence            88542   4  9999999999999842           1234555555555 455555544      5678899999999


Q ss_pred             HHHHHHHHhcCCC-CCC-eeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          195 LARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       195 ~a~~~~~~~~~~~-~~~-~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +|++++.+++++. ..+ ++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus       247 va~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  298 (348)
T 1ek6_A          247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA  298 (348)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             HHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCC
Confidence            9999999987642 233 8999999999999999999999999887665443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-34  Score=227.45  Aligned_cols=229  Identities=18%  Similarity=0.155  Sum_probs=185.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++|++|++++|+..+...       .....  ...+++++.+|+.|.+++.+++++.++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998765210       00000  03578999999999999999998556899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      +++...                .++.+++++|.  ++ ++||++||.++|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            998632                24667888876  64 89999999999998776788999888888777 999999998


Q ss_pred             HHh----cCCceEEeecceeeCCCCCCch----HHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       139 ~~~----~~~~~~ilR~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      ++.    .+++++++||+.+|||+....+    +..++..+..+.. ...++++.+.+++++++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            754    4899999999999999754432    3344555556653 3345777889999999999999999998764  


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +++||+++++++|+.|+++.+.+.+|.+.
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            47999999999999999999999999863

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.9e-34  Score=225.96  Aligned_cols=226  Identities=18%  Similarity=0.177  Sum_probs=183.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||++|++.|+++|++|++++|+..........         ..+++++.+|++|.+++.+++++.++|+|||++
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999976542211111         147899999999999999999755899999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCceEEEEeecceeccCCCC--CCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~~-------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +...             .++.+++++|.  ++++||++||.++|+.....  +++|+.  .|...| .+|..+|.+++..
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence            8643             24567888876  78899999999999865443  667766  455566 9999999999988


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH-HHHHHhcCCCCCCeeEEeeCCeee
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~~~~~~~~~~~~~~~~~~~~  221 (246)
                      +++++++||+++|||+....+...++..+..+.  ..++++. .+++++++|+|+ +++.+++++.  +++||+++++++
T Consensus       175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence            999999999999999864455666666666655  4445555 789999999999 9999998754  789999999999


Q ss_pred             cHHHHHHHHHHHhCCCcceeec
Q 025908          222 TFDGLARACAKVTGYCIAGCWI  243 (246)
Q Consensus       222 s~~~l~~~~~~~~g~~~~~~~~  243 (246)
                      |+.|+++.+.+.+|.+ ++.+.
T Consensus       250 s~~e~~~~i~~~~g~~-~~~~~  270 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT-LAEPV  270 (330)
T ss_dssp             EHHHHHHHHHHHHTCC-CSSCC
T ss_pred             CHHHHHHHHHHHhCCC-CceeC
Confidence            9999999999999987 44333

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=5e-34  Score=231.92  Aligned_cols=242  Identities=18%  Similarity=0.196  Sum_probs=185.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc------CCCCCC--chhh----hhhcCceEEEEccCCCHHHHHHhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGES--DQEF----AEFSSKILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~~~--~~~~----~~~~~~v~~~~~D~~~~~~~~~~~   68 (246)
                      ||||||||++|++.|+++|++|++++|.......      .+....  ....    .....+++++.+|+.|.+.+.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999886432100      000000  0000    001357899999999999999999


Q ss_pred             hcCCccEEEecCCCCc-------------------cchHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCC------
Q 025908           69 SAKGFDVVYDINGREA-------------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------  120 (246)
Q Consensus        69 ~~~~~d~vi~~~~~~~-------------------~~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~------  120 (246)
                      ++.++|+|||+|+...                   .++.+++++|.  +. ++||++||.++|+... .+.+|+      
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~  175 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH  175 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence            8445999999998631                   23566778776  55 5999999999998654 355554      


Q ss_pred             --------CCCCCCCcc-ccHHHHHHHHHh----cCCceEEeecceeeCCCCC------------------CchHHHHHH
Q 025908          121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (246)
Q Consensus       121 --------~~~~~~~~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~~------------------~~~~~~~~~  169 (246)
                              .+..|.+.| .+|..+|.+++.    .+++++++||+.+|||+..                  ...+..++.
T Consensus       176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (404)
T 1i24_A          176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  255 (404)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence                    355566666 999999998753    4899999999999999753                  245677788


Q ss_pred             HHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC--eeEEeeCCeeecHHHHHHHHHHH---hCCCcceeecC
Q 025908          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGYCIAGCWIS  244 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~~~~~---~g~~~~~~~~p  244 (246)
                      .+..+.++.+++++.+.++++|++|+|++++.+++++...+  ++||+++ +++|+.|+++.+.+.   +|.+.+....|
T Consensus       256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p  334 (404)
T 1i24_A          256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVP  334 (404)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCccccccC
Confidence            88888887777888889999999999999999998765445  7999998 889999999999998   78776654444

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=8.9e-34  Score=226.86  Aligned_cols=234  Identities=15%  Similarity=0.170  Sum_probs=186.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|+..+......      ......+++++.+|+.|++.+.++++..++|+|||++
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH------hhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999998765321100      0001257899999999999999999844599999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CceEEEEeecceeccCCC-CCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +..                ..++.+++++|.  + +++||++||..+||.... .+.+|+.+..|.+.| .+|..+|+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            852                234567888876  4 889999999999986543 467777777777777 9999999987


Q ss_pred             Hhc-------------CCceEEeecceeeCCCCC--CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       140 ~~~-------------~~~~~ilR~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +..             +++++++||+.+|||+..  ..++..++..+..+..+.+. ++...++++|++|+|++++.+++
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            542             899999999999999753  35667777787788776654 45678999999999999999886


Q ss_pred             C----CCCCCeeEEeeCC--eeecHHHHHHHHHHHhCCCccee
Q 025908          205 N----EKASRQVFNISGE--KYVTFDGLARACAKVTGYCIAGC  241 (246)
Q Consensus       205 ~----~~~~~~~~~~~~~--~~~s~~~l~~~~~~~~g~~~~~~  241 (246)
                      +    +...+++||++++  +++|+.|+++.+.+.+|.+.++.
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~  290 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ  290 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccc
Confidence            3    2345689999974  68999999999999999876553

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=8.5e-34  Score=224.86  Aligned_cols=223  Identities=21%  Similarity=0.220  Sum_probs=180.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||+++++.|+++|++|++++|+.......+..         ..+++++.+|++|.+.+.+++++.++|+|||++
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986543222221         147899999999999999999833499999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCceEEEEeecceec----cCCCCCCCCCCCCCCC-Ccc-ccHHHHHHHH
Q 025908           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~~-------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~----~~~~~~~~e~~~~~~~-~~~-~~k~~~e~~~  139 (246)
                      +...             .++.+++++|.  ++++||++||.++|+    .... +++|+.  .|. ..| .+|..+|.++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL  174 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence            8643             24667888876  778999999999998    5444 677776  555 556 8999999999


Q ss_pred             Hh-cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC
Q 025908          140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (246)
Q Consensus       140 ~~-~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~  218 (246)
                      +. .. +++++||+++|||+....+...++..+..+.  .+++ +....++++++|+|++++.+++++.  +++||++++
T Consensus       175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~  248 (333)
T 2q1w_A          175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG  248 (333)
T ss_dssp             HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred             HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence            88 66 9999999999999844456666666666665  3334 5678899999999999999998765  789999999


Q ss_pred             eeecHHHHHHHHHHHhCCCcceee
Q 025908          219 KYVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       219 ~~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      +.+++.|+++.+.+.+|.+ ++.+
T Consensus       249 ~~~s~~e~~~~i~~~~g~~-~~~~  271 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP-SYPE  271 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS-SCCC
T ss_pred             CCccHHHHHHHHHHHhCCC-Ccee
Confidence            9999999999999999987 4433

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=7.8e-35  Score=229.68  Aligned_cols=223  Identities=20%  Similarity=0.281  Sum_probs=183.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc---cccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||+|++|++.|+++|++|++++|+...   ....+....      ...+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL------EKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE------CSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc------cCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   111111000      0134455555543            899999


Q ss_pred             ecCCCCc---------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           78 DINGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        78 ~~~~~~~---------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      |+++...               .++.+++++|.  ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|+++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            9998632               24577888887  7899999999999998888889999999888887 9999999988


Q ss_pred             Hh----cCC-ceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeE
Q 025908          140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (246)
Q Consensus       140 ~~----~~~-~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (246)
                      +.    .++ +++++||+.+|||+.. ..+...++..+..+.++.+++++...+++++++|+|++++.+++++.. + +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            64    688 9999999999999754 346777888888888888888888999999999999999999988764 6 99


Q ss_pred             EeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          214 NISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       214 ~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+++++++|+.|+++.+. .+|.+.++...|
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~  262 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAAEVARKQ  262 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTCEEEEEC
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCCccccCC
Confidence            999999999999999999 999887766554

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.4e-33  Score=223.94  Aligned_cols=230  Identities=23%  Similarity=0.268  Sum_probs=185.0

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||||+++++.|+++|  ++|++++|..... ...+....      ...+++++.+|++|.+.+.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE------DDPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc------cCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999996  8999999975321 11111100      02578999999999999999996  999999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      |+|+...                .++.+++++|.  + .++||++||.++||.....+++|+.+..|.+.| .+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9998642                24667888876  4 379999999999987656678888888787777 99999999


Q ss_pred             HHHh----cCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCee
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (246)
                      +++.    .+++++++||+.+|||... ..+...++..+..+..+.+++++.+.+++++++|+|++++.+++++. .+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            8753    6899999999999999754 34556677777777777777888888999999999999999997654 5789


Q ss_pred             EEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          213 FNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       213 ~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      ||+++++++|+.|+++.+.+.+|.+.+
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~  266 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEE  266 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCST
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcc
Confidence            999999999999999999999998643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.4e-33  Score=224.94  Aligned_cols=228  Identities=17%  Similarity=0.198  Sum_probs=186.5

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||||+++++.|+++  |++|++++|..... ...+..     .  ...+++++.+|++|.+.+.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA-----I--LGDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG-----G--CSSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh-----h--ccCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999999  89999999975321 111110     0  02578999999999999999998  889999


Q ss_pred             ecCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCC------------CCCCCCCCCCCCC
Q 025908           78 DINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS  127 (246)
Q Consensus        78 ~~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~------------~~~~e~~~~~~~~  127 (246)
                      |+++...                .++.+++++|.  ++ +||++||.++||....            .+++|+.+..|.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            9998642                24677888876  66 9999999999986432            5788888877777


Q ss_pred             cc-ccHHHHHHHHHh----cCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       128 ~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .| .+|..+|.+++.    .+++++++||+.+|||... ..++..++..+..+..+.+++++.+.+++++++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            77 999999998754    5899999999999999754 34566677777777777777778889999999999999999


Q ss_pred             HhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      +++++. .+++||+++++++|+.|+++.+.+.+|.+.+
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  276 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKD  276 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            997653 5789999999999999999999999998653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=7e-35  Score=226.46  Aligned_cols=213  Identities=19%  Similarity=0.230  Sum_probs=176.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||| ||+|++|++.|+++|++|++++|++.+... +.          ..+++++.+|+.|.+     ++  ++|+|||++
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-IR----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-HH----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-Hh----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 999999999999999999999998765211 11          268999999999844     54  899999999


Q ss_pred             CCCcc---chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc-CCceEEeec
Q 025908           81 GREAD---EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP  151 (246)
Q Consensus        81 ~~~~~---~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~-~~~~~ilR~  151 (246)
                      +....   .+.+++++++    ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|++++.. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            87533   3567777754    6789999999999998877789999999998888 9999999999987 999999999


Q ss_pred             ceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHH
Q 025908          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (246)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~  231 (246)
                      +.+|||+...      +..+..+....+.++ .+.++++|++|+|++++.+++++. .+++||+++++++|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999997432      122334555555444 578899999999999999998876 57899999999999999999999


Q ss_pred             HHhCCCcce
Q 025908          232 KVTGYCIAG  240 (246)
Q Consensus       232 ~~~g~~~~~  240 (246)
                      +.+|.+.+.
T Consensus       224 ~~~g~~~~~  232 (286)
T 3ius_A          224 ELQGLPLPP  232 (286)
T ss_dssp             HHHTCCCCC
T ss_pred             HHcCCCCCc
Confidence            999987553

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=7.2e-34  Score=230.46  Aligned_cols=244  Identities=21%  Similarity=0.267  Sum_probs=183.7

Q ss_pred             CCccccchHHHHHHHH-HCCCeEEEEecCCCccccCCCCCCchhh----hhh-----cCc---eEEEEccCCCHHHHHHh
Q 025908            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS   67 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~~~~~~~----~~~-----~~~---v~~~~~D~~~~~~~~~~   67 (246)
                      ||||||||++|++.|+ ++|++|++++|........-........    ...     ..+   ++++.+|+.|++.+.++
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   87 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence            7999999999999999 9999999999976542000000000000    000     124   88999999999999999


Q ss_pred             hhcCC-ccEEEecCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCC-------CCCCCCCC
Q 025908           68 LSAKG-FDVVYDINGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (246)
Q Consensus        68 ~~~~~-~d~vi~~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~  121 (246)
                      +++.+ +|+|||+|+...                .++.+++++|.  ++++||++||.++|+...       ..+++|+.
T Consensus        88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~  167 (397)
T 1gy8_A           88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (397)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence            97656 999999998642                24667888876  788999999999998655       56788988


Q ss_pred             CCCCCCcc-ccHHHHHHHHHh----cCCceEEeecceeeCCCC----------CCchHHHHH----HHHHhCC-------
Q 025908          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR-------  175 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~----------~~~~~~~~~----~~~~~~~-------  175 (246)
                      +..|...| .+|..+|.+++.    .+++++++||+++|||+.          ...++..++    ..+..+.       
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
T 1gy8_A          168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (397)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence            88887777 999999998754    589999999999999863          123444443    1333332       


Q ss_pred             -----CcccCC------CCCceeeeeeHHHHHHHHHHHhcCCCCC-----C---eeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          176 -----PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       176 -----~~~~~~------~~~~~~~~i~~~D~a~~~~~~~~~~~~~-----~---~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                           .+.+++      ++.+.+++||++|+|++++.+++++...     +   ++||+++++++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (397)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCC
Confidence                 344544      5678899999999999999998754322     3   79999999999999999999999998


Q ss_pred             CcceeecC
Q 025908          237 CIAGCWIS  244 (246)
Q Consensus       237 ~~~~~~~p  244 (246)
                      +.+....|
T Consensus       328 ~~~~~~~~  335 (397)
T 1gy8_A          328 PIPVRECG  335 (397)
T ss_dssp             CCCEEEEC
T ss_pred             CCCeeeCC
Confidence            87665543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-34  Score=226.54  Aligned_cols=238  Identities=21%  Similarity=0.294  Sum_probs=182.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++|++|++++|....... ..     .... ...+++++.+|++|.+.+.+++++.++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-----HWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-----HHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhh-----hhhc-cCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            7999999999999999999999999986422110 00     0000 024588999999999999999983349999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCc-eEEEEeecceeccCCCCC----------------CCCCCCCC
Q 025908           80 NGREA----------------DEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVD  124 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~~-~~i~~Ss~~v~~~~~~~~----------------~~e~~~~~  124 (246)
                      |+...                .++.+++++|.  +++ +||++||.++|+.....+                .+|+.+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            98632                24667888876  664 999999999998644322                55666666


Q ss_pred             CCCcc-ccHHHHHHHHHh----cCCceEEeecceeeCCCCCC----chHHHHHHHHHhCC-----CcccCCCCCceeeee
Q 025908          125 PKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLG  190 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i  190 (246)
                      |...| .+|..+|.+++.    .+++++++||+.+|||....    ..+..++.....+.     ++..++++.+.++++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            66667 999999998864    48999999999999997432    24555555554444     566678888999999


Q ss_pred             eHHHHHHHHHHHhcC-CCCCCeeEEeeCCe--eecHHHHHHHHHHHhCCCcceeecC
Q 025908          191 HVKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~-~~~~~~~~~~~~~~--~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++|+|++++.++++ +...+++||+++++  ++|+.|+++.+.+.+|.+.++...|
T Consensus       241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  297 (347)
T 1orr_A          241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP  297 (347)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCC
Confidence            999999999999975 23457899999986  5999999999999999887665554

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-35  Score=229.12  Aligned_cols=222  Identities=16%  Similarity=0.187  Sum_probs=167.6

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d~v   76 (246)
                      |||||++|++|++.|+++| ++|++++|.......       ..    ..++. +.+|+.+.+.+.++++.   .++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~----~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VN----LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HH----HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-------hh----cCcce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 999999998654210       00    11233 67899999999988872   149999


Q ss_pred             EecCCCCc--------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        77 i~~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      ||+++...              .++.+++++|.  ++ +||++||.++|+.....+.+|+.+..|.+.| .+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            99998642              23677888877  77 9999999999987766678888888888777 9999999988


Q ss_pred             Hh----cCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       140 ~~----~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +.    .+++++++||+.+|||+..     ..++..++..+..+.++.+++++.. .+++++++|+|++++.+++++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            54    4799999999999999753     3456677777777877777777778 8999999999999999998765  


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +++||+++++++|+.|+++.+.+.+|.+
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999976

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=3.2e-34  Score=224.11  Aligned_cols=210  Identities=18%  Similarity=0.165  Sum_probs=178.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|+++++.|+ +|++|++++|+..                      .+.+|+.|.+.+.+++++.++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 8999999998752                      1357999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.+++++|+  ++ +|||+||.++|+.....+.+|+.+..|.+.| .+|..+|++++.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            8642                24678899877  55 8999999999998777788999988888877 999999999998


Q ss_pred             cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CC-CCeeEEeeCC
Q 025908          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KA-SRQVFNISGE  218 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~-~~~~~~~~~~  218 (246)
                      ...+++++||+.+|||+.. .+...++..+..+.++...++  +.+++++++|+|++++.+++++  .. .+++||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            8789999999999999753 456667777777776666554  7899999999999999999765  22 3789999999


Q ss_pred             eeecHHHHHHHHHHHhCCC
Q 025908          219 KYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       219 ~~~s~~~l~~~~~~~~g~~  237 (246)
                      +++|+.|+++.+.+.+|.+
T Consensus       219 ~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=6e-34  Score=221.84  Aligned_cols=211  Identities=18%  Similarity=0.178  Sum_probs=179.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||+++++.|+++|++|++++|+                          .+|+.|.+.+.+++++.++|+|||++
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999885                          25888999999999755799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.+++++|.  ++ +||++||.++|+.....+.+|+.+..|.+.| .+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            8642                23677888876  66 9999999999988766788999988888777 999999999998


Q ss_pred             cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeee
Q 025908          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~  221 (246)
                      .+.+++++||+.+||| . ..+...++..+..+..+...+  +...++++++|+|++++.+++++  .+++||+++++++
T Consensus       151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            8889999999999999 3 455666667666777665554  36789999999999999999775  5789999999999


Q ss_pred             cHHHHHHHHHHHhCCCcceeecC
Q 025908          222 TFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       222 s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+.|+++.+.+.+|.+.+..++|
T Consensus       225 s~~e~~~~i~~~~g~~~~~~~~~  247 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDVKVTPCT  247 (292)
T ss_dssp             EHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             cHHHHHHHHHHHhCCCCceeecc
Confidence            99999999999999886655444

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.1e-33  Score=226.24  Aligned_cols=221  Identities=17%  Similarity=0.207  Sum_probs=183.2

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC---CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---~~d~   75 (246)
                      ||||||||++|++.|+++| ++|++++|...... ..+            .++. +.+|+.+.+.+..+++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 99999999865521 111            1233 678999999998888631   5999


Q ss_pred             EEecCCCCc--------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        76 vi~~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      |||+++...              .++.+++++|.  ++ +||++||..+|+.....+.+|+.+..|.+.| .+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            999998632              24677888876  77 9999999999987766688888888888777 999999998


Q ss_pred             HHh----cCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCCC
Q 025908          139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       139 ~~~----~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      ++.    .+++++++||+.+|||+..     ...+..++..+..+..+.+++++.. .+++++++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            754    4799999999999999754     2456667777777777766777778 8999999999999999998765 


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                       +++||+++++++|+.|+++.+.+.+|.+
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence             7899999999999999999999999987

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=5.2e-34  Score=225.03  Aligned_cols=219  Identities=22%  Similarity=0.307  Sum_probs=178.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|+++.|+.                         .+|+.|.+.+.+++++.++|+|||++
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999987642                         25889999999999766899999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC----CCCCC-Ccc-ccHHHH
Q 025908           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT  135 (246)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~-~~~-~~k~~~  135 (246)
                      +...                 .++.+++++|.  ++++|||+||..+|+.....+++|+.    +..|. +.| .+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8642                 24567888876  78899999999999876666788876    55554 345 999999


Q ss_pred             HHHHHh----cCCceEEeecceeeCCCCC-----CchHHHHHHHHHh----C-CCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       136 e~~~~~----~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      |++++.    .+++++++||+.+|||+..     ..++..++..+..    + .++.+++++...++++|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998865    5899999999999999754     2455666666543    3 456666788889999999999999999


Q ss_pred             HhcCCCCC--------CeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          202 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       202 ~~~~~~~~--------~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++++...        +++||+++++++|+.|+++.+.+.+|.+.++.+.|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  274 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA  274 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCC
Confidence            99876532        57999999999999999999999999877655443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.4e-33  Score=221.69  Aligned_cols=221  Identities=14%  Similarity=0.071  Sum_probs=176.4

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++  |++|++++|+..+. .            ...+++++.+|+.|.+.+.+++++.++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~------------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-D------------VVNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-H------------HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-c------------ccCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999999  89999999976551 0            02467889999999999999998668999999


Q ss_pred             cCCCCc---------------cchHHHHHhCC--CCceEEEEeecceeccCC-CCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        79 ~~~~~~---------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +++...               .++.+++++|.  ++++||++||.++|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            998632               24667888876  788999999999998643 3467787777787777 9999999987


Q ss_pred             Hh----cCCceEEeecceeeCCCCCC-----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC--
Q 025908          140 ES----KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (246)
Q Consensus       140 ~~----~~~~~~ilR~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--  208 (246)
                      +.    .+++++++||+.+|||....     .....++.....+..+..++++.+.++++|++|+|++++.+++++..  
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~  234 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKI  234 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccccc
Confidence            53    58999999999999975311     12223333333444455667777889999999999999999987653  


Q ss_pred             -CCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          209 -SRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       209 -~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                       .+++||+++ +.+|+.|+++.+.+.+|
T Consensus       235 ~~~~~~ni~~-~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          235 KIHSSYNLAA-MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             CCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred             ccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence             247999997 88999999999999988

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=6e-33  Score=220.48  Aligned_cols=239  Identities=22%  Similarity=0.279  Sum_probs=179.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|........+     ..... ...++.++.+|++|++.+.+++++.++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987543311100     00111 124688899999999999999975579999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCC-CCcc-ccHHHHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL  139 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~e~~~  139 (246)
                      |+...                .++.+++++|+  ++++||++||.++|+.....+.+|+.+..| ...| .+|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            98632                24567788776  788999999999998766667888877654 5556 9999999987


Q ss_pred             Hh----c-CCceEEeecceeeCCCC-----------CCchHHHHHHHHH-hCCCcccCC------CCCceeeeeeHHHHH
Q 025908          140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  196 (246)
Q Consensus       140 ~~----~-~~~~~ilR~~~i~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a  196 (246)
                      +.    . +++++++||+++|||..           ...+...+..... .+..+.+++      ++.+.+++||++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            54    3 79999999999999841           1223444444433 233343332      456789999999999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++++.++++.  ...+++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  290 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCC
Confidence            9999988653  22237999999999999999999999999876655443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=9.8e-34  Score=222.90  Aligned_cols=216  Identities=19%  Similarity=0.176  Sum_probs=162.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||+++++.|+++|++|++++|+...                 .+  ++.+|++|++.+.+++++.++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999986533                 12  6789999999999999744699999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +..                ..++.+++++|.  +. +||++||..+|+. ...+++|+.+..|.+.| .+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            852                234678888876  55 9999999999987 45678888888887777 999999999999


Q ss_pred             cCCceEEeecceeeCCCCCC--chHHHHHHHHH-hCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC---CCCCeeEEe
Q 025908          142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~  215 (246)
                      .+++++++||+.+|||....  .+...++..+. .+..+...  +.+.+++++++|+|++++.++.++   ...+++||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            89999999999999987541  33444555555 55555443  356789999999999999998653   245789999


Q ss_pred             eCCeeecHHHHHHHHHHHhCCCcc
Q 025908          216 SGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       216 ~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      ++++++|+.|+++.+.+.+|.+.+
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred             cCCCcccHHHHHHHHHHHhCCChh
Confidence            999999999999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1e-32  Score=220.98  Aligned_cols=231  Identities=20%  Similarity=0.228  Sum_probs=185.6

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCc-cccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+||||++|++.|++. |++|++++|.... ....+....      ...+++++.+|++|.+.+.+++++.++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS------ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh------cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999997532 111111100      02578999999999999999997568999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC----CCc-------eEEEEeecceeccCCC--C--------CCCCCC
Q 025908           79 INGREA----------------DEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD  121 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~----~~~-------~~i~~Ss~~v~~~~~~--~--------~~~e~~  121 (246)
                      +|+...                .++.+++++|.    +++       +||++||.++||....  .        +++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            998642                24667888765    455       9999999999986431  1        678888


Q ss_pred             CCCCCCcc-ccHHHHHHHHHh----cCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +..|.+.| .+|..+|.+++.    .+++++++||+.+|||... ..++..++..+..+..+.+++++...+++++++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            87777777 999999998754    5899999999999999754 34556677777777777777888888999999999


Q ss_pred             HHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      |++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence            999999997653 578999999999999999999999998654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.1e-32  Score=219.38  Aligned_cols=228  Identities=20%  Similarity=0.275  Sum_probs=180.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|........+...      ....+++++.+|+.+.     ++.  ++|+|||++
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~D~~~~-----~~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDVVEP-----LYI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG------TTCTTEEEEECCTTSC-----CCC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh------ccCCceEEEeCccCCh-----hhc--CCCEEEECc
Confidence            799999999999999999999999999765422111100      0025789999999874     244  899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCC-----CCCCCCCcc-ccHHHHH
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~e  136 (246)
                      +...                .++.+++++|.  +. +||++||.++|+.....+.+|+     .+..|.+.| .+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            8632                23667888876  54 9999999999987666667776     345555556 8999999


Q ss_pred             HHHH----hcCCceEEeecceeeCCCCC---CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       137 ~~~~----~~~~~~~ilR~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      .+++    +.+++++++||+.+|||+..   ...+..++..+..+..+.+++++.+.+++++++|+|++++.+++.+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            9874    46899999999999999743   34566677777788877777888889999999999999999997653  


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++||+++++++|+.|+++.+.+.+|.+.++..+|
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p  291 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS  291 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCC
Confidence            57999999999999999999999999887666554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-32  Score=220.43  Aligned_cols=237  Identities=18%  Similarity=0.163  Sum_probs=183.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+..... ..+.............+++++.+|+.|.+.+.+++++.++|+|||+
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~  109 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL  109 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865421 0111000000000125789999999999999999985568999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CC---ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      ++...                .++.+++++|.  ++   ++||++||.++|+.....+++|+.+..|.+.| .+|..+|.
T Consensus       110 A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  189 (375)
T 1t2a_A          110 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  189 (375)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            98632                24567888876  55   79999999999987666788898888887777 99999999


Q ss_pred             HHHh----cCCceEEeecceeeCCCCCCchH----HHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      +++.    .+++++++|++.+|||+....+.    ..++..+..+.. ...++++.+.+++++++|+|++++.+++++. 
T Consensus       190 ~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  268 (375)
T 1t2a_A          190 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  268 (375)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-
Confidence            8753    58999999999999997543332    334445555543 3345777889999999999999999998764 


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                       +++||+++++++|+.|+++.+.+.+|.+.+
T Consensus       269 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  298 (375)
T 1t2a_A          269 -PEDFVIATGEVHSVREFVEKSFLHIGKTIV  298 (375)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             -CceEEEeCCCcccHHHHHHHHHHHhCCCcc
Confidence             379999999999999999999999998754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-32  Score=213.77  Aligned_cols=208  Identities=21%  Similarity=0.241  Sum_probs=163.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++||+|++++|++.+                 ..+   ..|    +...+.++  ++|+|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~~---~~~----~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GRI---TWD----ELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TEE---EHH----HHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Cee---ecc----hhhHhhcc--CCCEEEEec
Confidence            7999999999999999999999999997654                 111   112    22334565  899999999


Q ss_pred             CCCc--------------------cchHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHH
Q 025908           81 GREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (246)
Q Consensus        81 ~~~~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (246)
                      +...                    .++.+++++++    +.++||+.||.++||.....+.+|+++..+.+++ ..+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            7532                    13456666644    5567999999999999888899999998888776 555555


Q ss_pred             HHHH--HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeE
Q 025908          136 ESVL--ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (246)
Q Consensus       136 e~~~--~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (246)
                      |...  ...+++++++|++.+|||+.  ..+..+......+.. ..++++++.++|||++|+|+++..+++++.. +++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            5443  45789999999999999963  445555555555554 4458889999999999999999999988764 4699


Q ss_pred             EeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          214 NISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       214 ~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      |+++++++|+.|+++.+++.+|++.
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRA  240 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCC
Confidence            9999999999999999999999875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=7.3e-32  Score=212.38  Aligned_cols=218  Identities=16%  Similarity=0.115  Sum_probs=173.8

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||+++++.|+++  |++|++++|+....                .+++++.+|+.|++++.+++++.++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999876541                256788999999999999997668999999


Q ss_pred             cCCCCc---------------cchHHHHHhCC--CCceEEEEeecceeccC-CCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        79 ~~~~~~---------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +++...               .++.+++++|.  ++++||++||..+|+.. ...+.+|+.+..|.+.| .+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            998642               24677888876  78899999999999864 33456777777787777 9999999877


Q ss_pred             H----hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC--
Q 025908          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (246)
Q Consensus       140 ~----~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--  208 (246)
                      +    +.+++++++||+.+||+...     .......+.....+..+..++++...++++|++|+|++++.+++++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    46899999999999997521     122223333334444455556677889999999999999999987643  


Q ss_pred             -CCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          209 -SRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       209 -~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                       .+++||+++ ..+|+.|+++.+.+.+|
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCC
Confidence             247999997 67999999999999888

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1e-31  Score=216.75  Aligned_cols=234  Identities=16%  Similarity=0.149  Sum_probs=181.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcC-ceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++|++|++++|+..+.. ..+..... ....... +++++.+|+.|.+.+.++++..++|+|||
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  112 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYI-DPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN  112 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhh-ccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999876521 11111000 0000012 78999999999999999998556899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCc-----eEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           79 INGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      +++...                .++.+++++|.  +++     +||++||.++||.... +.+|+.+..|.+.| .+|..
T Consensus       113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~  191 (381)
T 1n7h_A          113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA  191 (381)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence            998642                24667888876  455     9999999999987666 88898888888777 99999


Q ss_pred             HHHHHHh----cCCceEEeecceeeCCCCCCchH----HHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          135 TESVLES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       135 ~e~~~~~----~~~~~~ilR~~~i~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      +|.+++.    .+++++++|++++|||+....+.    ..++..+..+.. ...++++...+++++++|+|++++.++++
T Consensus       192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            9998754    48999999999999997544332    334444555543 23357777889999999999999999987


Q ss_pred             CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +.  +++||+++++++|+.|+++.+.+.+|.+.
T Consensus       272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             SS--CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence            64  47999999999999999999999999763

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.5e-33  Score=216.96  Aligned_cols=212  Identities=19%  Similarity=0.197  Sum_probs=170.1

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++  |++|++++|++.+.. .+.          ..+++++.+|++|++++.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~----------~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLA----------DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHH----------HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHh----------hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999998  999999999865521 110          2578999999999999999998  8999999


Q ss_pred             cCCC------CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEee
Q 025908           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (246)
Q Consensus        79 ~~~~------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR  150 (246)
                      +++.      +..++.+++++|+  ++++||++||.+++.             .|..|..+|..+|+++++.+++++++|
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            9986      3446778889876  789999999988852             122455999999999999999999999


Q ss_pred             cceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHH
Q 025908          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (246)
Q Consensus       151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~  230 (246)
                      |+.++++.. ..++   ......+.. .. ..++..+++++++|+|++++.++.++...+++||+++++.+|+.|+++.+
T Consensus       140 p~~~~~~~~-~~~~---~~~~~~~~~-~~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i  213 (287)
T 2jl1_A          140 NALYTDFFV-NEGL---RASTESGAI-VT-NAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL  213 (287)
T ss_dssp             ECCBHHHHS-SGGG---HHHHHHTEE-EE-SCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred             CCEeccccc-hhhH---HHHhhCCce-ec-cCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence            998887631 1122   122223332 22 34557789999999999999999876556789999999999999999999


Q ss_pred             HHHhCCCcceeecC
Q 025908          231 AKVTGYCIAGCWIS  244 (246)
Q Consensus       231 ~~~~g~~~~~~~~p  244 (246)
                      .+.+|.+.+..++|
T Consensus       214 ~~~~g~~~~~~~~~  227 (287)
T 2jl1_A          214 SEVSGKKVVHQPVS  227 (287)
T ss_dssp             HHHHSSCCEEEECC
T ss_pred             HHHHCCcceEEeCC
Confidence            99999987766655

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=7.9e-32  Score=214.52  Aligned_cols=230  Identities=19%  Similarity=0.200  Sum_probs=182.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||+||+++++.|+++|++|++++|+..+...       ......  ..+++++.+|++|.+++.+++++.++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998765211       000000  2478999999999999999998556899999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      +|+...                .++.+++++|.  ++ ++||++||.++||.....+.+|+.+..|.+.| .+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            998632                23667888876  65 89999999999998777778888888887777 999999998


Q ss_pred             HHh----cCCceEEeecceeeCCCCCCchH----HHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          139 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       139 ~~~----~~~~~~ilR~~~i~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      ++.    .+++++++|+.++|||+......    ..++..+..+.. ....+++...+++++++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            754    48999999999999997543322    223344445543 2244667778899999999999999998754  


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      +++||+++++++|+.|+++.+.+.+|.+.+
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  269 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDIE  269 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCcc
Confidence            379999999999999999999999998754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-32  Score=219.01  Aligned_cols=236  Identities=18%  Similarity=0.168  Sum_probs=179.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||+||+++++.|+++|++|++++|+..... ..+..... .......+++++.+|++|.+++.+++++.++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQ-DPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhh-ccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865411 11111000 0000025788999999999999999985568999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CC---ceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      ++...                .++.++++++.  ++   ++||++||..+|+.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            98632                24567788776  55   79999999999987766688898888888777 99999999


Q ss_pred             HHHh----cCCceEEeecceeeCCCCCCch----HHHHHHHHHhCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~~----~~~~~~ilR~~~i~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      +++.    .+++++++|++.+|||+....+    +..++..+..+.. ...++++.+.++++|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            8753    5899999999999999754332    2344455555653 3345777889999999999999999998754 


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                       +++||+++++++|+.|+++.+.+.+|.+.+
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCCcc
Confidence             479999999999999999999999997654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.3e-32  Score=213.55  Aligned_cols=211  Identities=19%  Similarity=0.203  Sum_probs=167.6

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++  |++|++++|++.+... +.          ..+++++.+|++|++++.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA----------AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH----------HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh----------cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  9999999998665211 11          2578999999999999999998  8999999


Q ss_pred             cCCC----CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeecc
Q 025908           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (246)
Q Consensus        79 ~~~~----~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~~  152 (246)
                      +++.    +..++.+++++|+  ++++||++||.++|.             .|..|..+|..+|+++++.+++++++||+
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~  138 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG  138 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence            9985    3467889999987  889999999988851             12345599999999999999999999998


Q ss_pred             eeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHH
Q 025908          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (246)
Q Consensus       153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~  232 (246)
                      .++++.      ..++........+. .+.++..+++++++|+|++++.++.++...+++|++++++.+|+.|+++.+.+
T Consensus       139 ~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          139 WYSENY------LASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK  211 (286)
T ss_dssp             CBHHHH------HTTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred             HHhhhh------HHHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence            766642      11122222223333 34556789999999999999999987655678999999989999999999999


Q ss_pred             HhCCCcceeecC
Q 025908          233 VTGYCIAGCWIS  244 (246)
Q Consensus       233 ~~g~~~~~~~~p  244 (246)
                      .+|.+.+..++|
T Consensus       212 ~~g~~~~~~~~~  223 (286)
T 2zcu_A          212 QSGKQVTYQNLS  223 (286)
T ss_dssp             HHSSCCEEEECC
T ss_pred             HHCCCCceeeCC
Confidence            999987766655

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=4.2e-32  Score=232.70  Aligned_cols=225  Identities=20%  Similarity=0.230  Sum_probs=182.9

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHH-HHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~d~vi~   78 (246)
                      ||||||||+++++.|+++ |++|++++|+..+......          ..+++++.+|++|.++ +.++++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322211          2578999999998765 777887  8999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCC-------CCCCcc-ccH
Q 025908           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (246)
                      +|+...                .++.+++++|.  + ++||++||.++|+.....+++|+.+.       .|.+.| .+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            998632                24667888876  5 89999999999987666677777652       334445 899


Q ss_pred             HHHHHHHH----hcCCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       133 ~~~e~~~~----~~~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      ..+|.+++    +.+++++++||+++|||+..         ...+..++..+..+.++.+++++.+.+++++++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            99999874    46899999999999999753         345666777777888777777778899999999999999


Q ss_pred             HHHhcCCC--CCCeeEEeeCCe-eecHHHHHHHHHHHhCCCc
Q 025908          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~-~~s~~~l~~~~~~~~g~~~  238 (246)
                      +.+++++.  ..+++||+++++ ++|+.|+++.+.+.+|.+.
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            99998754  357899999986 8999999999999998653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=3.6e-32  Score=216.61  Aligned_cols=229  Identities=15%  Similarity=0.187  Sum_probs=179.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|++|++.|++.|++|++++|+++.......     .... ...+++++.+|+.|.+++.+++++.++|+|||+
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-----IFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----HHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-----HHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            6999999999999999999999999998733111000     0000 136899999999999999999987799999999


Q ss_pred             CCC-CccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhcCCceEEeeccee
Q 025908           80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (246)
Q Consensus        80 ~~~-~~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~ilR~~~i  154 (246)
                      ++. +..++.+++++|+  + +++||+ |   +||.    +.+|..+..|...| .+|+.+|+++++.+++++++||+.+
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~  162 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI  162 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence            986 6778899999987  6 899985 4   3442    24455555565555 9999999999999999999999999


Q ss_pred             eCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC-CeeecHHHHHHHHHHH
Q 025908          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKV  233 (246)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~l~~~~~~~  233 (246)
                      +|...... .. ..........+.++++++..+++++++|+|++++.++.++...+++|++.+ ++.+|+.|+++.+.+.
T Consensus       163 ~g~~~~~~-~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~  240 (346)
T 3i6i_A          163 ASWPYYNN-IH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK  240 (346)
T ss_dssp             SSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred             ccccCccc-cc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence            99753221 11 111112344566778888899999999999999999998776688999986 4889999999999999


Q ss_pred             hCCCcceeecC
Q 025908          234 TGYCIAGCWIS  244 (246)
Q Consensus       234 ~g~~~~~~~~p  244 (246)
                      +|.+.+..++|
T Consensus       241 ~g~~~~~~~~~  251 (346)
T 3i6i_A          241 IGRTLPRVTVT  251 (346)
T ss_dssp             HTSCCCEEEEC
T ss_pred             HCCCCceEecC
Confidence            99998877665

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.4e-31  Score=206.81  Aligned_cols=211  Identities=17%  Similarity=0.159  Sum_probs=167.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|.+. |++|++++|++.+... +.          ..+++++.+|++|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-~~----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-DW----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-GG----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-hh----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 8999999998776322 11          3689999999999999999998  99999999


Q ss_pred             CCCCc------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeec
Q 025908           80 NGREA------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (246)
Q Consensus        80 ~~~~~------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~  151 (246)
                      ++...      ..+.+++++|+  ++++||++||.+.   .         ...|......+..+|+.+++.+++++++||
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~---------~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---Q---------HNNPFHMSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---S---------TTCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---C---------CCCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence            98643      45778888877  7899999998442   1         111122223355788889999999999999


Q ss_pred             ceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHH
Q 025908          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (246)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~  231 (246)
                      +.++|+.      ..++......... ..+.++..+++++++|+|++++.++.++...+++|+++ ++.+|+.|+++.+.
T Consensus       141 ~~~~~~~------~~~~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~  212 (289)
T 3e48_A          141 AMYMDPL------KPYLPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS  212 (289)
T ss_dssp             CEESTTH------HHHHHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred             ccccccc------HHHHHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence            9999972      2233333333322 23456788999999999999999998876558899999 99999999999999


Q ss_pred             HHhCCCcceeecC
Q 025908          232 KVTGYCIAGCWIS  244 (246)
Q Consensus       232 ~~~g~~~~~~~~p  244 (246)
                      +.+|.+++...+|
T Consensus       213 ~~~g~~~~~~~~~  225 (289)
T 3e48_A          213 EASGTEIKYEPVS  225 (289)
T ss_dssp             HHHTSCCEECCCC
T ss_pred             HHHCCceeEEeCC
Confidence            9999987776655

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.98  E-value=3.7e-32  Score=204.22  Aligned_cols=201  Identities=20%  Similarity=0.186  Sum_probs=157.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|++.+.. .+           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIK-IE-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC-CC-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccch-hc-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            699999999999999999999999999876632 11           2689999999999999999998  899999999


Q ss_pred             CCC----------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH---H-hcC
Q 025908           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG  143 (246)
Q Consensus        81 ~~~----------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~---~-~~~  143 (246)
                      +..          ..++.+++++++  ++++||++||.+++...... ..++.+..|...| .+|...|.++   . +.+
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  154 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKE  154 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence            874          345778898877  78899999999887654332 2345566677777 8999999554   3 578


Q ss_pred             CceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecH
Q 025908          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF  223 (246)
Q Consensus       144 ~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~  223 (246)
                      ++++++||+.+|||+.....+       ..+....+.. +.. +++++++|+|++++.+++++...+++|+++++++.++
T Consensus       155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SEEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             ccEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            999999999999997543221       1222222222 222 7999999999999999999988899999999999887


Q ss_pred             HH
Q 025908          224 DG  225 (246)
Q Consensus       224 ~~  225 (246)
                      ++
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            63

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.98  E-value=2.4e-31  Score=213.30  Aligned_cols=225  Identities=20%  Similarity=0.215  Sum_probs=174.7

Q ss_pred             CCccccchHHHHHHHHHCC-----CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCC-cc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~-~d   74 (246)
                      ||||||+|++|++.|+++|     ++|++++|+.....  ..          ..+++++.+|+.|.+++.+++++.+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876632  11          2578999999999999999998333 99


Q ss_pred             EEEecCCCCc-----------cchHHHHHhCC----CCceEE-------EEeecceeccC--CCCCCCCCCCCCC-CCcc
Q 025908           75 VVYDINGREA-----------DEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH  129 (246)
Q Consensus        75 ~vi~~~~~~~-----------~~~~~l~~a~~----~~~~~i-------~~Ss~~v~~~~--~~~~~~e~~~~~~-~~~~  129 (246)
                      +|||+++...           .++.+++++|.    ++++||       |+||.++||..  ...+++|+.+..| ...|
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            9999998642           35778888876    478997       79999999874  3457788877655 3334


Q ss_pred             ccHHHHHHHHH----hcC-CceEEeecceeeCCCCCC--c-hHHH-HHHHH--HhCCCcccCCCC---CceeeeeeHHHH
Q 025908          130 KGKLNTESVLE----SKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSG---IQVTQLGHVKDL  195 (246)
Q Consensus       130 ~~k~~~e~~~~----~~~-~~~~ilR~~~i~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~---~~~~~~i~~~D~  195 (246)
                         ..+|++++    +.+ ++++++||+.+|||+...  . .... ++..+  ..+.++.+++++   ....++++++|+
T Consensus       155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence               34565553    355 999999999999997542  2 2233 23333  356766666766   345888999999


Q ss_pred             HHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      |++++.+++++...+++||+++++++|+.|+++.+++.+|.+...
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  276 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGE  276 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCC
T ss_pred             HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            999999998765567899999999999999999999999987553

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.98  E-value=5.5e-31  Score=209.48  Aligned_cols=225  Identities=17%  Similarity=0.124  Sum_probs=181.1

Q ss_pred             CCccccchHHHHHHHHHCC-------CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   73 (246)
                      |||+||||+++++.|+++|       ++|++++|+...... ..          ..+++++.+|+.|.+.+.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998654221 11          3578899999999999998884 389


Q ss_pred             cEEEecCCCCc---------------cchHHHHHhCC--C-----CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           74 DVVYDINGREA---------------DEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        74 d~vi~~~~~~~---------------~~~~~l~~a~~--~-----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |+|||+|+...               .++.+++++|.  +     +++||++||..+|+.....+.+|+.+..|...| .
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            99999998642               24667888876  4     789999999999987655678999988888777 9


Q ss_pred             cHHHHHHHHHh----cCCceEEeecceeeC-CCCCC----chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       131 ~k~~~e~~~~~----~~~~~~ilR~~~i~g-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      +|..+|.+++.    .+++.+++|++.+|| |+...    .++..++.....+....++.++....++++++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999998754    478999999999998 65422    2455566666677765555555667889999999999999


Q ss_pred             HhcCCCC---CCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       202 ~~~~~~~---~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +++.+..   .+++||+++ +++|+.|+++.+.+.+|.+.
T Consensus       248 ~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHH
T ss_pred             HHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCccc
Confidence            9987642   467999964 78999999999999999764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.98  E-value=1.8e-31  Score=220.75  Aligned_cols=237  Identities=15%  Similarity=0.132  Sum_probs=176.6

Q ss_pred             CCccccchHHHHHHHHHC---CCeEEEEecCCCccc------cCCCCCCc----hhhhhhcCceEEEEccCC------CH
Q 025908            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIA------QQLPGESD----QEFAEFSSKILHLKGDRK------DY   61 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~---g~~V~~l~r~~~~~~------~~~~~~~~----~~~~~~~~~v~~~~~D~~------~~   61 (246)
                      |||||+||++|+++|++.   |++|++++|+.....      ..+..-..    ........+++++.+|+.      +.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999999   899999999876421      00100000    000011368999999998      66


Q ss_pred             HHHHHhhhcCCccEEEecCCCC------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           62 DFVKSSLSAKGFDVVYDINGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~~~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +.+.++++  ++|+|||+++..            +.++.+++++|.  ++++|||+||.++|+.....+++|+.+..|.+
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78999998  899999999862            335788999877  78899999999999876667778877654322


Q ss_pred             c-----------c-ccHHHHHHHHHh----cCCceEEeecceeeCCCC------CCchHHHHHHHHHhCCCcc--cCCC-
Q 025908          128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN------YNPVEEWFFHRLKAGRPIP--IPGS-  182 (246)
Q Consensus       128 ~-----------~-~~k~~~e~~~~~----~~~~~~ilR~~~i~g~~~------~~~~~~~~~~~~~~~~~~~--~~~~-  182 (246)
                      .           | .+|+.+|.++++    .+++++++||+++||+..      ...++..++.........+  +... 
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence            2           5 999999998865    599999999999999853      1234444544443322221  1111 


Q ss_pred             -----CCceeeeeeHHHHHHHHHHHhcC----CCCCCeeEEeeCCee--ecHHHHHHHHHHHhCCCcce
Q 025908          183 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       183 -----~~~~~~~i~~~D~a~~~~~~~~~----~~~~~~~~~~~~~~~--~s~~~l~~~~~~~~g~~~~~  240 (246)
                           ++..+++++++|+|++++.++.+    +...+++||++++++  +++.|+++.+.+. |.+.+.
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~  384 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRR  384 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEE
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCccc
Confidence                 15678999999999999999875    445678999999988  9999999999985 776543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=1.8e-30  Score=224.12  Aligned_cols=237  Identities=20%  Similarity=0.231  Sum_probs=179.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+|+||++|++.|+++|++|++++|.........     ..... ...+++++.+|+.+.+.+.+++++.++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999765421100     00000 135788999999999999999976689999999


Q ss_pred             CCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCC----CCCCCCCCCCCCCCcc-ccHHHHH
Q 025908           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      |+...                .++.+++++|+  ++++||++||.++|+...    ..+.+|+.+..|...| .+|..+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            98642                24567888876  789999999999997532    2467787777777777 9999999


Q ss_pred             HHHHh------cCCceEEeecceeeCCCCC-----------CchHHHHHHHHHh-CCCcccCC------CCCceeeeeeH
Q 025908          137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  192 (246)
Q Consensus       137 ~~~~~------~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  192 (246)
                      ++++.      .+++++++||+++|||...           ..++..+...... +.++.+++      ++.+.+++||+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98754      5899999999999997521           2233433333322 23555555      56788999999


Q ss_pred             HHHHHHHHHHhcCC------CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceee
Q 025908          193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       193 ~D~a~~~~~~~~~~------~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      +|+|++++.+++..      ...+++||+++++++|+.|+++.+++.+|.+.+...
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~  307 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV  307 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCcee
Confidence            99999999988632      223579999999999999999999999998765543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=3.2e-31  Score=216.72  Aligned_cols=228  Identities=17%  Similarity=0.189  Sum_probs=173.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc--CCCCC----Cc-hhhhhhcCceEEEEccCCCHHHHHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGE----SD-QEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~----~~-~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   73 (246)
                      |||||+||++|++.|++.|++|++++|+......  .+...    .. ........++.++.+|+.+++.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            7999999999999999999999999999873100  00000    00 000112468999999999987777 444  99


Q ss_pred             cEEEecCCCC-------------ccchHHHHHhCC-CCceEEEEeecceecc-----CCCCCCCCCCC---CCCCCcc-c
Q 025908           74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (246)
Q Consensus        74 d~vi~~~~~~-------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (246)
                      |+|||+|+..             +.++.+++++|. ++++||++||.++ |.     ....+++|+++   ..|.+.| .
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            9999999863             235678888877 8899999999998 43     23456777776   3455666 9


Q ss_pred             cHHHHHHHHHh---cCCceEEeecceeeCCCCCC--------chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       131 ~k~~~e~~~~~---~~~~~~ilR~~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      +|+.+|.+++.   .+++++++||+++||+....        .++..++........++. +.++..+++++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999999875   79999999999999997533        235566667667666554 3356789999999999999


Q ss_pred             HHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      +.++..+. .+++||+++++++++.|+++.+.+ +|
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99998876 788999999999999999999998 56

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=9.8e-31  Score=207.96  Aligned_cols=228  Identities=14%  Similarity=0.089  Sum_probs=171.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEE-EccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+||||+++++.|+++|++|++++|+..+... +.    .... ....+++++ .+|++|.+.+.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH-HH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999997654210 00    0000 001468888 899999999999997  8999999


Q ss_pred             cCCCCc-------------cchHHHHHhCC---CCceEEEEeecceeccCC----CCCCCCCC----------------C
Q 025908           79 INGREA-------------DEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD----------------T  122 (246)
Q Consensus        79 ~~~~~~-------------~~~~~l~~a~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~----------------~  122 (246)
                      +|+...             .++.+++++|.   ++++||++||.++|+...    +.+++|+.                +
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            998642             34677888764   578999999999985432    14566665                2


Q ss_pred             CCCCCcc-ccHHHHHHHHHhc------CCceEEeecceeeCCCCCC----chHHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          123 VDPKSRH-KGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~~~------~~~~~ilR~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                      ..|.+.| .+|..+|.+++..      +++++++||+.+|||....    .....++..+..+....+.+++ ..+++++
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            2344456 9999999987532      7889999999999997432    2566677777777766544544 5689999


Q ss_pred             HHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      ++|+|++++.++.++...++.+ +..+..+|+.|+++.+.+.+|.+
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            9999999999998765445445 45567899999999999999864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.97  E-value=9.6e-30  Score=196.17  Aligned_cols=207  Identities=19%  Similarity=0.159  Sum_probs=169.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+ +|++|++++|+....                .+   +.+|++|++++.+++++.++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999 589999999986420                12   789999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +...                .++.++++++.  +. +||++||..+|+.... +++|+.+..|.+.| .+|..+|.+++.
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence            8642                24667888876  44 9999999999976544 77888888887777 899999999987


Q ss_pred             cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeee
Q 025908          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       142 ~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~  221 (246)
                        ++++++||+.+||+   ..+...++.....+..+...++   ..++++++|+|++++.+++++.  +++||+++ +.+
T Consensus       144 --~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~  212 (273)
T 2ggs_A          144 --DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERI  212 (273)
T ss_dssp             --TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCE
T ss_pred             --CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Ccc
Confidence              89999999999983   3445555566666666655443   7899999999999999997654  46999999 999


Q ss_pred             cHHHHHHHHHHHhCCCcce
Q 025908          222 TFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       222 s~~~l~~~~~~~~g~~~~~  240 (246)
                      |+.|+++.+.+.+|.+.+.
T Consensus       213 s~~e~~~~~~~~~g~~~~~  231 (273)
T 2ggs_A          213 SRFELALKIKEKFNLPGEV  231 (273)
T ss_dssp             EHHHHHHHHHHHTTCCSCE
T ss_pred             cHHHHHHHHHHHhCCChhh
Confidence            9999999999999987654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=4.5e-31  Score=220.19  Aligned_cols=228  Identities=17%  Similarity=0.179  Sum_probs=174.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc------CCCCCCc-hhhhhhcCceEEEEccCCCHHHHHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGESD-QEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~~~~-~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   73 (246)
                      ||||||||++|++.|++.|++|++++|+..+...      .+..... ........+++++.+|+.+++.+. +..  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            7999999999999998889999999998873100      0000000 000112468999999999977776 444  99


Q ss_pred             cEEEecCCCC-------------ccchHHHHHhCC-CCceEEEEeecceecc-----CCCCCCCCCCC---CCCCCcc-c
Q 025908           74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (246)
Q Consensus        74 d~vi~~~~~~-------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (246)
                      |+|||+++..             +.++.+++++|. +.++|||+||.++ |.     ....+++|+++   ..|.+.| .
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  311 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  311 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence            9999999862             345788998877 7899999999999 42     23456777766   3345556 9


Q ss_pred             cHHHHHHHHHh---cCCceEEeecceeeCCCCCCc--------hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       131 ~k~~~e~~~~~---~~~~~~ilR~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      +|+.+|+++++   .|++++++||+.+||+.....        .+..++........++. ++++..+++++++|+|+++
T Consensus       312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai  390 (508)
T 4f6l_B          312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  390 (508)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHH
Confidence            99999999865   799999999999999874322        35566666666665554 3457889999999999999


Q ss_pred             HHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHh
Q 025908          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~  234 (246)
                      +.++.++. .+++||+++++++++.|+++.+.+..
T Consensus       391 ~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          391 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99998776 67899999999999999999998754

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.97  E-value=2.3e-30  Score=203.96  Aligned_cols=222  Identities=18%  Similarity=0.224  Sum_probs=170.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|+.+.....+.     ..  ...+++++.+|+.|++++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-----EF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-----HH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-----Hh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            6999999999999999999999999998752111000     00  03579999999999999999998  899999999


Q ss_pred             CCC-ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC-CCccccHHHHHHHHHhcCCceEEeecceee
Q 025908           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (246)
Q Consensus        81 ~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~ilR~~~i~  155 (246)
                      +.. ...+.+++++|+  + +++||+ |   +||...    ++..+..| ...|.+|..+|+++++.+++++++||+.++
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~  159 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA  159 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence            864 567889999987  6 899984 3   344221    22233333 234589999999999999999999999877


Q ss_pred             CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC-CeeecHHHHHHHHHHHh
Q 025908          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKVT  234 (246)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~l~~~~~~~~  234 (246)
                      ++     +...+......+..+.++++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.+.+.+
T Consensus       160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            64     1222222222334455567777899999999999999999987765677888875 47899999999999999


Q ss_pred             CCCcceeecC
Q 025908          235 GYCIAGCWIS  244 (246)
Q Consensus       235 g~~~~~~~~p  244 (246)
                      |.+.+...+|
T Consensus       235 g~~~~~~~~~  244 (318)
T 2r6j_A          235 GKKFKKIHVP  244 (318)
T ss_dssp             TCCCEEEEEC
T ss_pred             CCCCceeecC
Confidence            9998877766

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.97  E-value=1.9e-30  Score=203.90  Aligned_cols=231  Identities=13%  Similarity=0.144  Sum_probs=170.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|+++|++|++++|+.+......    ...... ...+++++.+|+.|++++.++++  ++|+|||+
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   83 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   83 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH----HHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEEC
Confidence            699999999999999999999999999865310000    000000 03589999999999999999998  89999999


Q ss_pred             CCC-----CccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC-CCccccHHHHHHHHHhcCCceEEee
Q 025908           80 NGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR  150 (246)
Q Consensus        80 ~~~-----~~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~ilR  150 (246)
                      ++.     +...+.+++++|+  + +++||+ |   +||.....+   ..+..| ...|.+|..+|+++++.+++++++|
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilr  156 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYVS  156 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEEE
Confidence            986     3567889999986  6 899985 3   454322111   223333 3345999999999999999999999


Q ss_pred             cceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC-eeecHHHHHHH
Q 025908          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARA  229 (246)
Q Consensus       151 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~  229 (246)
                      |+.++++..... ..........+..+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.
T Consensus       157 p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~  235 (313)
T 1qyd_A          157 SNMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI  235 (313)
T ss_dssp             CCEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHH
T ss_pred             eceecccccccc-ccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHH
Confidence            999887521110 0000000012334455677788999999999999999999887656778888764 78999999999


Q ss_pred             HHHHhCCCcceeecCC
Q 025908          230 CAKVTGYCIAGCWISG  245 (246)
Q Consensus       230 ~~~~~g~~~~~~~~p~  245 (246)
                      +.+.+|.+.+..++|.
T Consensus       236 ~~~~~g~~~~~~~~~~  251 (313)
T 1qyd_A          236 WERLSEQNLDKIYISS  251 (313)
T ss_dssp             HHHHHTCCCEECCBCS
T ss_pred             HHHhcCCCCceEECCH
Confidence            9999999988777663

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=1.3e-30  Score=194.65  Aligned_cols=192  Identities=15%  Similarity=0.167  Sum_probs=156.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|+++|++|++++|+..+...             ..+++++.+|++| ++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999998766321             1579999999999 999999998  89999999


Q ss_pred             CCCC--------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH-HhcCCceE
Q 025908           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT  147 (246)
Q Consensus        80 ~~~~--------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-~~~~~~~~  147 (246)
                      ++..        ..++.+++++|+  ++++||++||.++++..   +..| .+..|...| .+|..+|+++ +..+++++
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~  146 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT  146 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence            9864        345788999887  78899999998876543   2333 333445556 9999999999 78899999


Q ss_pred             EeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHH
Q 025908          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (246)
Q Consensus       148 ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~  227 (246)
                      ++||+.+||+.....+              ..   +....++++++|+|++++.++.++...+++|++++++ .++.|+.
T Consensus       147 ilrp~~v~g~~~~~~~--------------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~  208 (219)
T 3dqp_A          147 IIQPGALTEEEATGLI--------------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL  208 (219)
T ss_dssp             EEEECSEECSCCCSEE--------------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred             EEeCceEecCCCCCcc--------------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence            9999999998532221              11   1456889999999999999999877678999998875 8998886


Q ss_pred             HH
Q 025908          228 RA  229 (246)
Q Consensus       228 ~~  229 (246)
                      +.
T Consensus       209 ~~  210 (219)
T 3dqp_A          209 ES  210 (219)
T ss_dssp             HT
T ss_pred             HH
Confidence            53

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=1.5e-29  Score=203.25  Aligned_cols=192  Identities=17%  Similarity=0.180  Sum_probs=162.0

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|++|++.|+++|+ +|++++|+                              .|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 77776553                              46888999998  89999999


Q ss_pred             CCC------------CccchHHHHHhCC--CCc-eEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHh---
Q 025908           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLES---  141 (246)
Q Consensus        80 ~~~------------~~~~~~~l~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~---  141 (246)
                      ++.            +..++.+++++|+  +++ +||++||..+|+              ...|..+|..+|+++++   
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK~~~E~~~~~~~~  119 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESKLQGEQLLREYAE  119 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHHHHHHHHHHHHHH
Confidence            975            3446789999987  666 999999999975              22344999999998865   


Q ss_pred             -cCCceEEeecceeeCCCCC---CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC-CeeEEee
Q 025908          142 -KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNIS  216 (246)
Q Consensus       142 -~~~~~~ilR~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~-~~~~~~~  216 (246)
                       .+++++++||+++|||+..   ..++..++..+..+.++.+ +++...+++++++|+|++++.+++++... +++||++
T Consensus       120 ~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~  198 (369)
T 3st7_A          120 EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP  198 (369)
T ss_dssp             HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred             HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence             7899999999999999753   3567778888888877666 46788899999999999999999887653 7899999


Q ss_pred             CCeeecHHHHHHHHHHHhCCCcc
Q 025908          217 GEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       217 ~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      +++.+|+.|+++.+++.+|.+.+
T Consensus       199 ~~~~~s~~e~~~~~~~~~g~~~~  221 (369)
T 3st7_A          199 NVFKVTLGEIVDLLYKFKQSRLD  221 (369)
T ss_dssp             CCEEEEHHHHHHHHHHHHHHHHH
T ss_pred             CCCceeHHHHHHHHHHHhCCCcc
Confidence            99999999999999999987643

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.97  E-value=2.3e-30  Score=216.06  Aligned_cols=210  Identities=14%  Similarity=0.090  Sum_probs=159.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|+..+.                .   .+.+|+.+.  +.++++  ++|+|||++
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~---~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------G---KRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------T---CEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------c---ceeecccch--hHHhcC--CCCEEEECC
Confidence            79999999999999999999999999987652                1   145676542  355666  899999999


Q ss_pred             CCC-----------------ccchHHHHHh-CC--CCceEEEEeecceec-cCCCCCCCCCCCCCCCCcc-ccHHHHHHH
Q 025908           81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        81 ~~~-----------------~~~~~~l~~a-~~--~~~~~i~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (246)
                      +..                 +.++.+++++ ++  ++++||++||.++|| .....+++|+.+. +.++| ..|...|..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA  288 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence            863                 2247788888 33  788999999999998 4445567787776 55555 777777765


Q ss_pred             H---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEe
Q 025908          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  215 (246)
Q Consensus       139 ~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  215 (246)
                      +   +..+++++++||+.+|||+.  ..+..+...+..+.. ..++++.+.+++|+++|+|++++.+++++.. +++||+
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni  364 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINA  364 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEE
T ss_pred             HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEE
Confidence            4   46799999999999999963  445555544444443 3457888899999999999999999987753 569999


Q ss_pred             eCCeeecHHHHHHHHHHHhCCCc
Q 025908          216 SGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       216 ~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      ++++++|+.|+++.+++.+|.+.
T Consensus       365 ~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          365 VAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             SCSCCEEHHHHHHHTTC------
T ss_pred             ECCCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.97  E-value=6.1e-30  Score=201.76  Aligned_cols=225  Identities=16%  Similarity=0.211  Sum_probs=169.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++|++|++++|+. +......    ...... ...+++++.+|+.|++++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~   83 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS   83 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            69999999999999999999999999986 2200000    000000 13679999999999999999998  8999999


Q ss_pred             cCCCC-ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC-CCccccHHHHHHHHHhcCCceEEeecce
Q 025908           79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY  153 (246)
Q Consensus        79 ~~~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~ilR~~~  153 (246)
                      +++.. ...+.+++++|.  + +++||+ |   +||..    .++..+..| ...|.+|..+|+++++.+++++++||+.
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~  155 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC  155 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEece
Confidence            99864 567889999987  6 899983 3   44421    122233333 2335899999999999999999999998


Q ss_pred             eeCCCCCCchHHHHHHH---HHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC-CeeecHHHHHHH
Q 025908          154 IYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARA  229 (246)
Q Consensus       154 i~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~l~~~  229 (246)
                      ++++.     ...+...   ...+..+..+++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.
T Consensus       156 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~  230 (321)
T 3c1o_A          156 FGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISL  230 (321)
T ss_dssp             EHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHH
T ss_pred             ecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHH
Confidence            87751     2222110   11333455567777889999999999999999988765678888876 488999999999


Q ss_pred             HHHHhCCCcceeecC
Q 025908          230 CAKVTGYCIAGCWIS  244 (246)
Q Consensus       230 ~~~~~g~~~~~~~~p  244 (246)
                      +.+.+|.+.+..++|
T Consensus       231 ~~~~~g~~~~~~~~~  245 (321)
T 3c1o_A          231 WEAKSGLSFKKVHMP  245 (321)
T ss_dssp             HHHHHTSCCCEEEEC
T ss_pred             HHHHcCCcceeeeCC
Confidence            999999998877766

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=7e-30  Score=203.39  Aligned_cols=219  Identities=14%  Similarity=0.138  Sum_probs=167.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEcc-CCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|++|++.|+++|++|++++|+.++.. ..+.         ...+++++.+| ++|++++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---------~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~   79 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---------AIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   79 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---------TSTTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---------hcCCcEEEECCccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999999999999876521 1110         02478999999 999999999998  8999999


Q ss_pred             cCCCC----ccchHHHHHhCC--C-CceEEEEeecc--eeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEe
Q 025908           79 INGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (246)
Q Consensus        79 ~~~~~----~~~~~~l~~a~~--~-~~~~i~~Ss~~--v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~il  149 (246)
                      +++..    ....++++++|+  + +++||++||..  .|+           +..+..|+.+|..+|+++++.+++++++
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~-----------~~~~~~y~~sK~~~E~~~~~~gi~~~iv  148 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG-----------PWPAVPMWAPKFTVENYVRQLGLPSTFV  148 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS-----------SCCCCTTTHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccC-----------CCCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence            88754    123478888876  7 89999999975  222           1223446699999999999999999999


Q ss_pred             ecceeeCCCCCCchHHHHHHH--HHhCCC-cccCCCCCceeeeeeH-HHHHHHHHHHhcCCC--CCCeeEEeeCCeeecH
Q 025908          150 RPVYIYGPLNYNPVEEWFFHR--LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTF  223 (246)
Q Consensus       150 R~~~i~g~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~~~~~~~~s~  223 (246)
                      ||+ +||+........ ++..  ...+.. +.+++++++.++++++ +|+|++++.+++++.  ..+++|++++ +.+|+
T Consensus       149 rpg-~~g~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~  225 (352)
T 1xgk_A          149 YAG-IYNNNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSP  225 (352)
T ss_dssp             EEC-EEGGGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECH
T ss_pred             ecc-eecCCchhcccc-cccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCH
Confidence            976 688754221110 1100  012222 2335667788999999 899999999997652  2578999996 67999


Q ss_pred             HHHHHHHHHHhCCCcceeecC
Q 025908          224 DGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       224 ~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      .|+++.+.+.+|.+.+..++|
T Consensus       226 ~e~~~~i~~~~G~~~~~~~vp  246 (352)
T 1xgk_A          226 VQVCAAFSRALNRRVTYVQVP  246 (352)
T ss_dssp             HHHHHHHHHHHTSCEEEEECS
T ss_pred             HHHHHHHHHHHCCCCceEECC
Confidence            999999999999998877777

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.97  E-value=5.6e-30  Score=200.85  Aligned_cols=227  Identities=15%  Similarity=0.220  Sum_probs=169.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc--ccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||||++|+++++.|+++|++|++++|+....  ....     ..... ...+++++.+|++|++++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   82 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-----QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI   82 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-----HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHH-----HHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence            69999999999999999999999999986531  0000     00000 13689999999999999999998  899999


Q ss_pred             ecCCCC-ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC-CCccccHHHHHHHHHhcCCceEEeecc
Q 025908           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPV  152 (246)
Q Consensus        78 ~~~~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~ilR~~  152 (246)
                      |+++.. .....+++++|+  + +++||+ |   +||..    .++..+..| ...|.+|..+|+++++.+++++++||+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~  154 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-S---EFGND----VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN  154 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEee-c---ccccC----ccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999864 466789999987  6 899984 4   34422    122333334 234589999999999999999999999


Q ss_pred             eeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC-eeecHHHHHHHHH
Q 025908          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA  231 (246)
Q Consensus       153 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~  231 (246)
                      .++++..... .. .......+..+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+.
T Consensus       155 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~  232 (308)
T 1qyc_A          155 CFAGYFLRSL-AQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE  232 (308)
T ss_dssp             EEHHHHTTTT-TC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             eecccccccc-cc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence            9887531110 00 0000112334455677788999999999999999999877656788888764 7899999999999


Q ss_pred             HHhCCCcceeecC
Q 025908          232 KVTGYCIAGCWIS  244 (246)
Q Consensus       232 ~~~g~~~~~~~~p  244 (246)
                      +.+|.+.+..++|
T Consensus       233 ~~~g~~~~~~~~~  245 (308)
T 1qyc_A          233 KKIDKTLEKAYVP  245 (308)
T ss_dssp             HHTTSCCEEEEEC
T ss_pred             HHhCCCCceEeCC
Confidence            9999998877766

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=8e-31  Score=204.83  Aligned_cols=217  Identities=20%  Similarity=0.214  Sum_probs=167.4

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++| ++|++++|++.+.. ..+.          ..+++++.+|+.|++++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----------~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   78 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----------LQGAEVVQGDQDDQVIMELALN--GAYATFI   78 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----------HTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----------HCCCEEEEecCCCHHHHHHHHh--cCCEEEE
Confidence            6999999999999999998 99999999876521 0010          2578999999999999999998  8999999


Q ss_pred             cCCCC--------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEE
Q 025908           79 INGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS  148 (246)
Q Consensus        79 ~~~~~--------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~i  148 (246)
                      +++..        ...+.+++++|+  ++++||++|+.++++....      .  .+..|+.+|..+|+++++.++++++
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~--~~~~y~~sK~~~e~~~~~~gi~~~i  150 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R--LAAAHFDGKGEVEEYFRDIGVPMTS  150 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S--CCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c--ccCchhhHHHHHHHHHHHCCCCEEE
Confidence            98742        235678888876  8899999888887753211      1  1233559999999999999999999


Q ss_pred             eecceeeCCCCCCchHHHHHHH-HHhCCC--cccCCCCCceeeeeeHHHHHHHHHHHhcCC-CCCCeeEEeeCCeeecHH
Q 025908          149 LRPVYIYGPLNYNPVEEWFFHR-LKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASRQVFNISGEKYVTFD  224 (246)
Q Consensus       149 lR~~~i~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~~~~~~~~~~~s~~  224 (246)
                      +||+.+||+....     ++.. ...+..  +.. ..++..+++++++|+|++++.++.++ ...+++|++++ +.+|+.
T Consensus       151 lrp~~~~~~~~~~-----~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~  223 (299)
T 2wm3_A          151 VRLPCYFENLLSH-----FLPQKAPDGKSYLLSL-PTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAE  223 (299)
T ss_dssp             EECCEEGGGGGTT-----TCCEECTTSSSEEECC-CCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHH
T ss_pred             EeecHHhhhchhh-----cCCcccCCCCEEEEEe-cCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHH
Confidence            9999999974210     1110 112221  222 23567889999999999999999864 23578999987 679999


Q ss_pred             HHHHHHHHHhCCCcceeecC
Q 025908          225 GLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       225 ~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |+++.+.+.+|.+++...+|
T Consensus       224 e~~~~~~~~~g~~~~~~~~~  243 (299)
T 2wm3_A          224 EYAALLTKHTRKVVHDAKMT  243 (299)
T ss_dssp             HHHHHHHHHHSSCEEECCCC
T ss_pred             HHHHHHHHHHCCCceeEecC
Confidence            99999999999987766665

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=2.2e-29  Score=197.42  Aligned_cols=230  Identities=19%  Similarity=0.236  Sum_probs=168.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|+++|++|++++|+.+.......  ....... ...+++++.+|+.|++++.++++  ++|+|||+
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~   83 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPET--KEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVICA   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHH--HHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHH--HHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEEC
Confidence            6999999999999999999999999998621000000  0000000 13579999999999999999998  89999999


Q ss_pred             CCCC-ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCC-CCccccHHHHHHHHHhcCCceEEeeccee
Q 025908           80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI  154 (246)
Q Consensus        80 ~~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~ilR~~~i  154 (246)
                      ++.. .....+++++|+  + +++||+ |   +||...    ++..+..| ...|.+|..+|+++++.+++++++||+.+
T Consensus        84 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~  155 (307)
T 2gas_A           84 AGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAF  155 (307)
T ss_dssp             SSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred             CcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEccee
Confidence            9864 567889999987  6 899983 3   344221    22233334 23458999999999999999999999998


Q ss_pred             eCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCC-eeecHHHHHHHHHHH
Q 025908          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKV  233 (246)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~~~  233 (246)
                      +++.... +.. ..........+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+.+.
T Consensus       156 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~  233 (307)
T 2gas_A          156 TGYFLRN-LAQ-LDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKK  233 (307)
T ss_dssp             TTTTGGG-TTC-TTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred             ecccccc-ccc-cccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHH
Confidence            8863110 000 0000112233455567778899999999999999999877656778888764 789999999999999


Q ss_pred             hCCCcceeecC
Q 025908          234 TGYCIAGCWIS  244 (246)
Q Consensus       234 ~g~~~~~~~~p  244 (246)
                      +|.+.+..++|
T Consensus       234 ~g~~~~~~~~~  244 (307)
T 2gas_A          234 IGKTLEKTYVS  244 (307)
T ss_dssp             HTSCCEEEEEC
T ss_pred             hCCCCceeecC
Confidence            99998877766

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=2.8e-29  Score=187.68  Aligned_cols=200  Identities=18%  Similarity=0.240  Sum_probs=132.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|++.+...            ...+++++.+|++|.+.  +++.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ------------THKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH------------HCSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh------------ccCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            7999999999999999999999999998765211            11578999999998877  6776  899999999


Q ss_pred             CCCc-------cchHHHHHhCC--CCceEEEEeecceecc-CCCCCCCCCCCCCCCCcc-ccHHHHHHH--HH--hcCCc
Q 025908           81 GREA-------DEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN  145 (246)
Q Consensus        81 ~~~~-------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~--~~--~~~~~  145 (246)
                      +...       ..+.+++++|+  +++++|++||..++.. ....+..++.+..|...| .+|...|.+  ++  +.+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            8743       35678999987  6899999999876543 333345566666677766 888888875  55  68999


Q ss_pred             eEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHHH
Q 025908          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (246)
Q Consensus       146 ~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  225 (246)
                      ++++||+.+||++.....   + .  .....+...+++   .++++++|+|++++.+++++...+++|+++++.+.+..|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~-~--~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y-Q--IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e-E--eccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432111   1 0  112223333332   369999999999999999988889999999998777654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=1.3e-29  Score=191.36  Aligned_cols=193  Identities=12%  Similarity=0.159  Sum_probs=152.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||||++|+++++.|+++|++|++++|+..+... +.          ..++ +++.+|++  +.+.+++.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~----------~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LR----------ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH----------HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HH----------hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999998766321 11          2478 99999998  67788887  99999999


Q ss_pred             CCCC------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhcCC
Q 025908           80 NGRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV  144 (246)
Q Consensus        80 ~~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~  144 (246)
                      ++..            ..++.+++++++  ++++||++||.+.+..       +..+ .+...| .+|..+|.++++.++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi  163 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL  163 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence            9864            345778888887  7899999999665422       1111 334445 999999999999999


Q ss_pred             ceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeecHH
Q 025908          145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (246)
Q Consensus       145 ~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (246)
                      +++++||+.++|+.....              +....+.....++++++|+|++++.+++++...+++|+++++ .+++.
T Consensus       164 ~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          164 DYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             EEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            999999999999853221              122223344688999999999999999887667899999988 58999


Q ss_pred             HHHHHHH
Q 025908          225 GLARACA  231 (246)
Q Consensus       225 ~l~~~~~  231 (246)
                      |+++.++
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=2.4e-28  Score=194.10  Aligned_cols=207  Identities=17%  Similarity=0.227  Sum_probs=164.8

Q ss_pred             CCccccchHHHHHHHHHC-CC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|++. |+ +|++++|+..+......     ..  ...++.++.+|+.|.+.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~-----~~--~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-----EF--NDPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH-----HH--CCTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH-----Hh--cCCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 99999998654211000     00  02579999999999999999998  9999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +|+...                .++.++++++.  ++++||++||..++              .|.+.| .+|..+|.++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLF  163 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHH
Confidence            998642                24567888876  78999999997653              133455 9999999988


Q ss_pred             Hh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       140 ~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      +.       .+++++++||+++||+..  ..++.+...+..+. ++++. ++...+++++++|+|++++.+++++. .++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC
Confidence            54       469999999999999863  45666777777777 66664 56778899999999999999998754 567


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      +|++.++ .+++.|+++.+.+.++
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTCC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhCC
Confidence            9998887 5999999999987553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=6.1e-29  Score=186.27  Aligned_cols=198  Identities=14%  Similarity=0.133  Sum_probs=146.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|++.+.....           ..+++++.+|++|.+.  +++.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999876632211           2689999999998877  6776  999999999


Q ss_pred             CC---------CccchHHHHHhCC--CCceEEEEeecceeccCCC---CCCCCCCCCCCCCcc-ccHHHHHHH--H-Hhc
Q 025908           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL---LPHCETDTVDPKSRH-KGKLNTESV--L-ESK  142 (246)
Q Consensus        81 ~~---------~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~---~~~~e~~~~~~~~~~-~~k~~~e~~--~-~~~  142 (246)
                      +.         +...+.+++++|+  + +++|++||.+.+.....   .+.++...+.|...| .+|...|.+  + ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            87         3446788999987  6 99999999866543222   233333344446666 899998864  2 367


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +++++++||+.+||++....+.       .....+..   .....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999985433211       01122222   2345689999999999999999988788999999977655


Q ss_pred             HH
Q 025908          223 FD  224 (246)
Q Consensus       223 ~~  224 (246)
                      +.
T Consensus       220 ~~  221 (224)
T 3h2s_A          220 HH  221 (224)
T ss_dssp             --
T ss_pred             cc
Confidence            44

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=3.8e-27  Score=185.80  Aligned_cols=223  Identities=22%  Similarity=0.267  Sum_probs=154.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEec-CCCcccc--CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      ||||||||+++++.|+++|++|++++| ++.....  .+..     ......+++++.+|++|++.+.++++  ++|+||
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   79 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTN-----LPGASEKLHFFNADLSNPDSFAAAIE--GCVGIF   79 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHT-----STTHHHHEEECCCCTTCGGGGHHHHT--TCSEEE
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHh-----hhccCCceEEEecCCCCHHHHHHHHc--CCCEEE
Confidence            799999999999999999999999998 5422100  0000     00001357889999999999999998  899999


Q ss_pred             ecCCCC---------------ccchHHHHHhCC---CCceEEEEeeccee-ccC-CCCCCCCCCCC--------CCCC--
Q 025908           78 DINGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKS-DLLPHCETDTV--------DPKS--  127 (246)
Q Consensus        78 ~~~~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~-~~~-~~~~~~e~~~~--------~~~~--  127 (246)
                      |+|+..               ..++.+++++|.   ++++||++||.+++ +.. ...+.+|+.+.        .|..  
T Consensus        80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~  159 (322)
T 2p4h_X           80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWN  159 (322)
T ss_dssp             ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred             EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccccc
Confidence            998642               123567888765   47899999998754 322 22345555432        2232  


Q ss_pred             ccccHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHHH--HHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          128 RHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       128 ~~~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      |..+|..+|.++.    +.+++++++||+++|||.........  .+.....+....+ +.  ..+++++++|+|++++.
T Consensus       160 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~  236 (322)
T 2p4h_X          160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIY  236 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHH
Confidence            4499999998764    36899999999999999743221111  1112234443322 22  33589999999999999


Q ss_pred             HhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      +++++...+ .|+ ++++++|+.|+++.+.+.++
T Consensus       237 ~~~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          237 LLENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HhhCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence            997655444 588 56688999999999998874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=2e-28  Score=188.19  Aligned_cols=199  Identities=13%  Similarity=0.032  Sum_probs=161.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||+||+++++.|+++|++|++++|+..+.   .           ..+++++.+|++|++.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A-----------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C-----------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c-----------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999986541   1           1467889999999999999998  899999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCceEEEEeecceeccC-CCCCCCCCCCCCCCCcc-ccHHHHHHHHH----
Q 025908           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (246)
Q Consensus        81 ~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~~----  140 (246)
                      +..            ..++.++++++.  ++++||++||..+|+.. ...+++|+.+..|...| .+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            863            224567888876  78899999999999763 34678899888887777 99999999875    


Q ss_pred             hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       141 ~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      +.+++++++||+.+|+..                      .++....++++++|+|++++.+++++...+++|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~----------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKP----------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSC----------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCC----------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            468999999999998421                      0122356789999999999999987755457899988877


Q ss_pred             ecHHHHHHHHHHHhCCCcc
Q 025908          221 VTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       221 ~s~~~l~~~~~~~~g~~~~  239 (246)
                      .++.++.+.  +.+|.++.
T Consensus       210 ~~~~d~~~~--~~lg~~p~  226 (267)
T 3ay3_A          210 ESWWDNDKS--AFLGWVPQ  226 (267)
T ss_dssp             SCCBCCGGG--GGGCCCCC
T ss_pred             ccccCHHHH--HHcCCCCC
Confidence            788888777  77786544

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=7.4e-28  Score=183.51  Aligned_cols=205  Identities=16%  Similarity=0.145  Sum_probs=155.8

Q ss_pred             CCccccchHHHHHHHHHC--CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+|++|+++++.|+++  |++|++++|++.+... +           ..++.++.+|++|.+++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            699999999999999999  8999999998654211 1           2567889999999999999998  8999999


Q ss_pred             cCCCCc-----------------------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCC-
Q 025908           79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (246)
Q Consensus        79 ~~~~~~-----------------------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-  126 (246)
                      +++...                             .++.+++++++  ++++||++||..++..        ..+..+. 
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~  147 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLG  147 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcccccc
Confidence            998531                             13567888876  7889999999887421        1121111 


Q ss_pred             -Ccc-ccHHHHHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          127 -SRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       127 -~~~-~~k~~~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                       ..| .+|..+|.++++.+++++++||+.+||+......       ...+....+++   ....+++++|+|++++.+++
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~  217 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDELLQ---TDTKTVPRADVAEVCIQALL  217 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-------EEEESTTGGGG---SSCCEEEHHHHHHHHHHHTT
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhh-------hhccCCcCCcC---CCCcEEcHHHHHHHHHHHHc
Confidence             123 6899999999999999999999999998532110       00111111112   13569999999999999998


Q ss_pred             CCCCCCeeEEeeCCe---eecHHHHHHHHHHHhCCC
Q 025908          205 NEKASRQVFNISGEK---YVTFDGLARACAKVTGYC  237 (246)
Q Consensus       205 ~~~~~~~~~~~~~~~---~~s~~~l~~~~~~~~g~~  237 (246)
                      ++...+++|++++++   ++|+.|+++.+++.+|++
T Consensus       218 ~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          218 FEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             CGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             CccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            876567899999964   599999999999988863

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=1.3e-27  Score=189.75  Aligned_cols=226  Identities=19%  Similarity=0.227  Sum_probs=155.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+||||++|++.|+++|++|++++|+..+... ...  ..... ...+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSH--LLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-THH--HHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-HHH--HHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999997654210 000  00000 12478899999999999999998  899999998


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CceEEEEeecce-eccC---CCCCCCCCCCC--------CC-C-Cc
Q 025908           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGV-YLKS---DLLPHCETDTV--------DP-K-SR  128 (246)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v-~~~~---~~~~~~e~~~~--------~~-~-~~  128 (246)
                      +..               +.++.+++++|.  + +++|||+||.++ |+..   ...+.+|+.+.        .| . .|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            742               113567888765  4 899999999874 4321   11256666421        11 1 24


Q ss_pred             cccHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHH--HHHHHHHhCCCcccCCC------CCceeeeeeHHHHH
Q 025908          129 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGS------GIQVTQLGHVKDLA  196 (246)
Q Consensus       129 ~~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~i~~~D~a  196 (246)
                      ..+|..+|.++.    +.+++++++||+.+|||+.......  ..+.....+..... +.      ....++++|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence            489999998764    3689999999999999975322111  11111223332111 10      01234899999999


Q ss_pred             HHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      ++++.+++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       248 ~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          248 RAHIFVAEKESA-SGRYICCA-ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHCTTC-CEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCc-CCcEEEec-CCCCHHHHHHHHHHhCC
Confidence            999999976543 45787766 56899999999999876

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=5.8e-27  Score=173.20  Aligned_cols=185  Identities=18%  Similarity=0.266  Sum_probs=142.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|+++++.|+++|++|++++|++.+... ..          ..+++++.+|++|++++.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EG----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SS----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-cc----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            6999999999999999999999999998765322 11          2578999999999999999998  899999999


Q ss_pred             CCCc---------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhcCCceEE
Q 025908           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS  148 (246)
Q Consensus        81 ~~~~---------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~i  148 (246)
                      +...         ..+.++++++.  ++++||++||.++|+.....+      . +...| .+|..+|.++++.++++++
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~------~-~~~~y~~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP------P-RLQAVTDDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC------G-GGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc------c-cchhHHHHHHHHHHHHHhCCCCEEE
Confidence            8643         24678888876  788999999999986533211      1 33445 8999999999999999999


Q ss_pred             eecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCe
Q 025908          149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (246)
Q Consensus       149 lR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~  219 (246)
                      +||+.+ ++.......           ...+.+.. . .++++++|+|++++.+++++...+++|++++++
T Consensus       149 lrp~~~-~~~~~~~~~-----------~~~~~~~~-~-~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          149 VMPPHI-GDQPLTGAY-----------TVTLDGRG-P-SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCSEE-ECCCCCSCC-----------EEESSSCS-S-CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             EeCCcc-cCCCCCcce-----------EecccCCC-C-CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            999997 332211100           00010111 0 489999999999999998876678899999874

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=1.5e-27  Score=183.23  Aligned_cols=197  Identities=12%  Similarity=0.023  Sum_probs=159.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..              ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876621              2679999999999999999998  999999999


Q ss_pred             CCCc------------cchHHHHHhCC--CCceEEEEeecceecc-CCCCCCCCCCCCCCCCcc-ccHHHHHHHHH----
Q 025908           81 GREA------------DEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (246)
Q Consensus        81 ~~~~------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~----  140 (246)
                      +...            .++.++++++.  +.+++|++||..+|+. ....+.+|+.+..|...| .+|...|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            8732            34667888876  7789999999999974 345577888888888877 99999998874    


Q ss_pred             hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       141 ~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      +.+++++++||+.++++.                      .+.....++++.+|+++.+..+++.+...+.++++.++++
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            578999999999999862                      2234456789999999999999988765556888888776


Q ss_pred             ecHHHHHHHHHHHhCCC
Q 025908          221 VTFDGLARACAKVTGYC  237 (246)
Q Consensus       221 ~s~~~l~~~~~~~~g~~  237 (246)
                      .++.++...  +.+|.+
T Consensus       211 ~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             TCCBCCGGG--GGGCCC
T ss_pred             CCcccChhH--HHCCCC
Confidence            666655333  445543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=8e-27  Score=185.11  Aligned_cols=224  Identities=18%  Similarity=0.222  Sum_probs=155.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc--CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+||||++|++.|+++|++|++++|+.....+  .+...     .....+++++.+|+.|.+.+.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDL-----PKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTS-----TTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhc-----ccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999998653110  00000     0001368899999999999999998  8999999


Q ss_pred             cCCCCc---------------cchHHHHHhCC--C-CceEEEEeecce-eccC-CCCCCCCCCCCC---------CCCcc
Q 025908           79 INGREA---------------DEVEPILDALP--N-LEQFIYCSSAGV-YLKS-DLLPHCETDTVD---------PKSRH  129 (246)
Q Consensus        79 ~~~~~~---------------~~~~~l~~a~~--~-~~~~i~~Ss~~v-~~~~-~~~~~~e~~~~~---------~~~~~  129 (246)
                      +|+...               .++.+++++|.  + +++||++||..+ |+.. ...+.+|+.+..         |...|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            987521               13567888776  5 899999999874 4432 223355554221         23335


Q ss_pred             -ccHHHHHHHHH----hcCCceEEeecceeeCCCCCCchHHHHHHH--HHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 -~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                       .+|..+|.++.    +.+++++++||+++|||.........+...  ...+.... .+.. ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHH
Confidence             89999998763    468999999999999997533222211111  12333221 1111 234599999999999999


Q ss_pred             hcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      ++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence            977543 45776655 56899999999999874

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=2.6e-27  Score=176.30  Aligned_cols=182  Identities=18%  Similarity=0.134  Sum_probs=140.9

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++|+  +|++++|++.+     .          ..+++++.+|+.|.+++.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~----------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----E----------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----C----------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----c----------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            69999999999999999998  99999998765     1          257888899999888777666    899999


Q ss_pred             cCCCCc--------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        79 ~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      +++...              .++.++++++.  ++++||++||..+|+.             |...| .+|..+|++++.
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH
Confidence            998742              24667888876  7889999999988742             22345 999999999999


Q ss_pred             cCCc-eEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          142 KGVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       142 ~~~~-~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      .+++ ++++||+.+|||.....+...+    . ....++ .+  ..+++++++|+|++++.+++++.  +++|++++++.
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~  208 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDEL  208 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHH
T ss_pred             cCCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHH
Confidence            9999 9999999999996542222211    1 111222 22  26789999999999999998765  68999999876


Q ss_pred             ecHH
Q 025908          221 VTFD  224 (246)
Q Consensus       221 ~s~~  224 (246)
                      +++.
T Consensus       209 ~~~~  212 (215)
T 2a35_A          209 RKLG  212 (215)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            5543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=3.9e-25  Score=166.81  Aligned_cols=192  Identities=17%  Similarity=0.193  Sum_probs=138.8

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++| ++|++++|++.+.....           ..+++++.+|++|++++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            7999999999999999999 89999999877633222           2579999999999999999998  89999999


Q ss_pred             CCCCc--cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeecceee
Q 025908           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (246)
Q Consensus        80 ~~~~~--~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~~~i~  155 (246)
                      ++...  ..+++++++++  ++++||++||..+|+.......... ...+..+...+..+|+.+++.+++++++||+.++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~  174 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT  174 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence            88642  24667888876  7889999999999876433221111 1122233456777888899999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC-CCCeeEEeeCCee
Q 025908          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  220 (246)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~~~~~  220 (246)
                      ++.....             .. ..........+++.+|+|++++.++.++. ..++.|++++++.
T Consensus       175 ~~~~~~~-------------~~-~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          175 DEDIIDY-------------EL-TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCSCCCC-------------EE-ECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCCcce-------------EE-eccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            9742110             00 00111112358999999999999998765 4688999999753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1.1e-24  Score=164.86  Aligned_cols=185  Identities=18%  Similarity=0.186  Sum_probs=138.7

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+|+||+++++.|+++|+  +|++++|++.+.... .          ..++.++.+|++|++++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-A----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-G----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-c----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  999999987653211 1          2468899999999999999997  8999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        79 ~~~~~-------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +++..             ..++.++++++.  +.++||++||.++|+.             +...| .+|..+|.+++..
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc
Confidence            99874             234667777775  6789999999988742             12344 9999999999999


Q ss_pred             CC-ceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC
Q 025908          143 GV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (246)
Q Consensus       143 ~~-~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  217 (246)
                      ++ +++++||+.+|||.........+........+. ..+    ...+++++|+|++++.++.++.. .+.+++.+
T Consensus       158 ~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          158 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            99 599999999999964322222333332222211 111    23589999999999999987654 34665544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=1.3e-24  Score=162.37  Aligned_cols=193  Identities=18%  Similarity=0.239  Sum_probs=140.3

Q ss_pred             CCccccchHHHHHHHH-HCCCeEEEEecCCC-ccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~-~~g~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||+|++|+++++.|+ +.|++|++++|++. +.....         ....++.++.+|++|.+++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---------IDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---------HTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---------cCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            6999999999999999 89999999999876 421110         013689999999999999999998  9999999


Q ss_pred             cCCC-CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCC-CccccHHHHHHHHHhcCCceEEeeccee
Q 025908           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPVYI  154 (246)
Q Consensus        79 ~~~~-~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~~~~k~~~e~~~~~~~~~~~ilR~~~i  154 (246)
                      +++. +.. +++++++++  +.++||++||..+|+...... .+....... .|..+|..+|.++++.+++++++||+.+
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~-~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v  157 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL-EKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL  157 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH-HHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc-ccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence            9987 334 788888876  778999999999875322100 000000111 2448999999999999999999999999


Q ss_pred             eCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh--cCCC-CCCeeEEeeCCe
Q 025908          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  219 (246)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~--~~~~-~~~~~~~~~~~~  219 (246)
                      +++.....+             ............+++.+|+|++++.++  .++. ..++.+.+.++.
T Consensus       158 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          158 YNDPEXTDY-------------ELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECCTTCCCC-------------EEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCCCcce-------------eeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            997321110             000011111224899999999999999  7664 356778887654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.85  E-value=4.3e-22  Score=151.79  Aligned_cols=200  Identities=19%  Similarity=0.160  Sum_probs=135.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..               .   .+.+|+.+.+++.+++++.  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            799999999999999999999999999876521               1   1568999988888888643  8999999


Q ss_pred             cCCCCc-c------------chHHHHHhC----C--CCceEEEEeecceeccCCCCC-C-------CCCC-------CCC
Q 025908           79 INGREA-D------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLP-H-------CETD-------TVD  124 (246)
Q Consensus        79 ~~~~~~-~------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~-~-------~e~~-------~~~  124 (246)
                      +++... .            ++.++++++    .  +.+++|++||..+|+.....+ .       ++..       +..
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            998754 1            233455543    2  458999999999885431100 0       0000       012


Q ss_pred             CCCcc-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      +...| .+|...|.+++.       .+++++++||+.++++.     ...++............. + ....+++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~-----~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL-----LQASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH-----HHHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh-----hhhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            33345 899999987643       58999999999999973     111111000000000001 1 234689999999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeecHHH
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~  225 (246)
                      ++++.++.++  ...++.|+++++..++++|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999765  3468899999998766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.85  E-value=1.7e-21  Score=150.64  Aligned_cols=212  Identities=17%  Similarity=0.148  Sum_probs=143.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....        .....++.++.+|++|.+++.+++++.     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532111        112357899999999999988888643     7999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||+||....                    +    ++.++..++  +..++|++||...+.           +..+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  151 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAGFSAY  151 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCCchHH
Confidence            9999986311                    2    344444444  678999999977642           22233445


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC------chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                       .+|...|.+.+       ..++++++++|+.+.++....      .....+.........+..   ......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHH
Confidence             89999988753       268999999999998864211      001111111111111111   1122457789999


Q ss_pred             HHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      |++++.+++++. .+..|+++++......+....+.+.++
T Consensus       229 a~a~~~~~~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          229 AAAIRLALDTEK-TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            999999998875 456899998776666666666666543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.84  E-value=1.2e-20  Score=145.61  Aligned_cols=210  Identities=15%  Similarity=0.136  Sum_probs=144.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.........     ... ...++.++.+|++|++++.+++++     .++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----NIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHH-----HhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987544211000     000 013789999999999998888863     27999


Q ss_pred             EEecCCCCcc----------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |||++|....                      +..+++++    +.  +..++|++||...+....          .+..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  165 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH  165 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence            9999985321                      12223333    22  467999999988864311          1223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .| .+|...|.+++       ..+++++++||+.++++......  ............+.       ....+++++|+|+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~  238 (278)
T 2bgk_A          166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCSCCCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------cccccCCHHHHHH
Confidence            35 89999988764       25899999999999998632211  12222222221111       1234788999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCeeecHHHHHHHHHHH
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKV  233 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s~~~l~~~~~~~  233 (246)
                      +++.++..+  ...|++|++.++..+++.|+++.+.+.
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence            999999653  346889999999999999999887654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.83  E-value=2.6e-20  Score=141.94  Aligned_cols=198  Identities=13%  Similarity=0.129  Sum_probs=136.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|++++.++++.     .++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     01111135788899999999998888753     27999


Q ss_pred             EEecCCCCcc-------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      |||+++....                   +..++++++    +  +..++|++||...+..           ..+...| 
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  160 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------CCCCcccH
Confidence            9999986421                   122334432    2  5689999999887532           1123345 


Q ss_pred             ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...|.+++.       .+++++++||+.++++.........+......+.++         ..+.+++|+|++++.+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHH
Confidence            899999887642       489999999999998742111122233333333322         2367899999999999


Q ss_pred             hcCCC--CCCeeEEeeCCeeecH
Q 025908          203 LGNEK--ASRQVFNISGEKYVTF  223 (246)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~~~s~  223 (246)
                      +..+.  ..+++|+++++..+|+
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCCC
T ss_pred             hCCccccCCCcEEEECCceeccC
Confidence            96532  3578999999887664

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.82  E-value=1.3e-20  Score=142.79  Aligned_cols=191  Identities=15%  Similarity=0.139  Sum_probs=132.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..         ....+++++.+|++|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA---------KECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            799999999999999999999999999765421110         00146778899999999999998743 48999999


Q ss_pred             CCCCcc--------------------chHHHHHhC----C--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           80 NGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      ++....                    +..++++++    .  + ..++|++||...+...           .+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  152 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence            985321                    222333332    2  3 5799999998876321           122335 89


Q ss_pred             HHHHHHHHHh-------cCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          132 KLNTESVLES-------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       132 k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      |...|.+++.       .+++++++||+.++++..... ....+...+..+.+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHh
Confidence            9999887642       589999999999998731100 01122222222222         246889999999999999


Q ss_pred             cCC--CCCCeeEEeeCCee
Q 025908          204 GNE--KASRQVFNISGEKY  220 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~~  220 (246)
                      ..+  ...++.+++.++..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGG
T ss_pred             CchhhcccCCEEEECCCcc
Confidence            754  34578899988754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.81  E-value=2.1e-18  Score=131.61  Aligned_cols=185  Identities=16%  Similarity=0.179  Sum_probs=133.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..              ...+.++.+|++|++++.+++++.     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865521              246889999999999988887643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...+++++    .  +..++|++||...+...         +..+...|
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~~~Y  170 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPSALA  170 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCccHHH
Confidence            9999986421                    222344432    2  56799999997764221         12233345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++|+.++++.......    .......++         ..+.+++|+|++++.
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----~~~~~~~p~---------~r~~~~~dva~av~~  237 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH----STLAGLHPV---------GRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH----HHHHTTSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH----HHHhccCCC---------CCCcCHHHHHHHHHH
Confidence             78999887764       248999999999999985332211    111122221         235679999999999


Q ss_pred             HhcCCCCCCeeEEeeCCeee
Q 025908          202 VLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~  221 (246)
                      +.+.....|+++++.+|...
T Consensus       238 L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          238 LEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHCTTCCSCEEEESTTGGG
T ss_pred             hcccCCCCCcEEEECCCeec
Confidence            97666668899999998654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.80  E-value=4.2e-20  Score=144.25  Aligned_cols=211  Identities=18%  Similarity=0.176  Sum_probs=141.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     .... ...++.++.+|++|.+++.+++++.     ++|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE-----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998654211100     0011 1356899999999999988888642     679


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----C--C-CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|||+||....                    +..+++++    +  + +..++|++||...+...           .+..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~  175 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------GFVV  175 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------TTCH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------CCcc
Confidence            99999985321                    12223333    2  2 45799999998765321           1233


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-H-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-E-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .| .+|...|.+.+       ..+++++++||+.++++...... . ...........+.         ..+.+++|+|+
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~  246 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHH
Confidence            45 89999988764       26899999999999987321110 0 0111122222211         23678999999


Q ss_pred             HHHHHhcCCC--CCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                      +++.++..+.  ..|++|++.++..+++.++++.+.+..|.
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence            9999986532  36789999999888888887777665543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.80  E-value=9e-19  Score=133.03  Aligned_cols=194  Identities=14%  Similarity=0.245  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     .. .....++.++.+|++|++++.+++++.     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR-----THWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998654211100     00 011356889999999999988887642     799


Q ss_pred             EEEecCCCCccc-----------------------h----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREADE-----------------------V----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        75 ~vi~~~~~~~~~-----------------------~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|||++|.....                       .    +.++..+.  +..++|++||...+...           .+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----------PG  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CC
Confidence            999999853210                       1    22333333  56899999998775321           12


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...|.+.+       ..+++++++||+.++++...... ...+........+.         ..+.+++|+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  222 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIGTAAQVA  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            2345 89999987764       24899999999999998532100 11122222222211         2367899999


Q ss_pred             HHHHHHhcCCC--CCCeeEEeeCCe
Q 025908          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (246)
                      ++++.++..+.  ..|+.+++.++.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999997642  358899998875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=1.4e-18  Score=133.95  Aligned_cols=209  Identities=15%  Similarity=0.146  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh---hhhcCceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     ..   .....++.++.+|++|++++.+++++.     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ-----QILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998654211000     00   001246889999999999888887642     7


Q ss_pred             ccEEEecCCCCcc------------------------chHHHHHh----CC-CCceEEEEeecce-eccCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (246)
Q Consensus        73 ~d~vi~~~~~~~~------------------------~~~~l~~a----~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~  122 (246)
                      +|++||++|....                        +..+++++    +. ...++|++||... +..           
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  155 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-----------  155 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC-----------
Confidence            9999999986321                        11122233    22 1279999999776 421           


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH--HHH------HHHHHhCCCcccCCCCCce
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWF------FHRLKAGRPIPIPGSGIQV  186 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~  186 (246)
                      ..+...| .+|...+.+.+       ..++++++++|+.++++.......  ...      ........+.         
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------  226 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA---------  226 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT---------
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC---------
Confidence            1122335 89999887764       368999999999999875211100  000      1111111111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC---CCCeeEEeeCCeeecHHHHHHHHHHHh
Q 025908          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKVT  234 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~l~~~~~~~~  234 (246)
                      ..+.+++|+|++++.++..+.   ..|+++++.++..+++.++++.+.+.+
T Consensus       227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            236789999999999986532   468899999999999999999988754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.79  E-value=2.4e-19  Score=135.69  Aligned_cols=191  Identities=14%  Similarity=0.140  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......         ...+++++.+|++|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR---------ECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---------HSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------HcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            7999999999999999999999999997654211100         0135678899999999999998743 58999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           80 NGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      ++....                    +...++++    +.  + ..++|++||...+..           ..+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  152 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------CCCCchHHHH
Confidence            986421                    12222333    22  3 578999999876532           1223345 89


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      |...|.+++       ..+++++++||+.++++...... ............+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHc
Confidence            999998764       25899999999999987421000 0011112222211         135788999999999999


Q ss_pred             cCC--CCCCeeEEeeCCee
Q 025908          204 GNE--KASRQVFNISGEKY  220 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~~  220 (246)
                      .++  ...++.|++.++..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CccccCCCCCEEEECCCcc
Confidence            753  34688999998754

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=6.8e-19  Score=133.01  Aligned_cols=185  Identities=16%  Similarity=0.189  Sum_probs=130.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC----CccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (246)
                      |||+|+||+++++.|+++|++|++++|+...                 ..+.++.+|++|++++.+++++.    ++|++
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999997651                 34578999999999998888643    78999


Q ss_pred             EecCCCCcc------------------------chHHHHHhC----CCC--------ceEEEEeecceeccCCCCCCCCC
Q 025908           77 YDINGREAD------------------------EVEPILDAL----PNL--------EQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        77 i~~~~~~~~------------------------~~~~l~~a~----~~~--------~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                      ||+++....                        +..++++++    ...        .++|++||...+...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            999986321                        122233332    211        289999998876431        


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                         .+...| .+|...|.+.+       ..+++++++||+.++++.... ....+...+....++  .      ..++++
T Consensus       143 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~------~~~~~~  210 (242)
T 1uay_A          143 ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P------PRLGRP  210 (242)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S------CSCCCH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c------ccCCCH
Confidence               122345 88988887653       248999999999999874211 111222222222221  0      236789


Q ss_pred             HHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +|+|++++.++.+....|+.|++.++..++
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            999999999998765678899999986543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.79  E-value=6.2e-19  Score=129.66  Aligned_cols=161  Identities=12%  Similarity=0.106  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+ +|++|++++|+..                      .+.+|+.+++++.+++++. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999998743                      2678999999999988742 58999999


Q ss_pred             CCCCc--------------------cchHHHHHhCC-C---CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           80 NGREA--------------------DEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        80 ~~~~~--------------------~~~~~l~~a~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      ++...                    .+..++++++. .   ..++|++||...+..           ..+...| .+|..
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHH
Confidence            98531                    12345666654 2   368999998766421           1222345 89999


Q ss_pred             HHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          135 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       135 ~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      .|.+++.      .+++++++||+.++++.      ..    ...         ......+++++|+|++++.++.. ..
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~------~~----~~~---------~~~~~~~~~~~dva~~~~~~~~~-~~  194 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESW------DK----LEP---------FFEGFLPVPAAKVARAFEKSVFG-AQ  194 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGH------HH----HGG---------GSTTCCCBCHHHHHHHHHHHHHS-CC
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCch------hh----hhh---------hccccCCCCHHHHHHHHHHhhhc-cc
Confidence            9988753      38999999999999872      11    101         11235688999999999988854 34


Q ss_pred             CCeeEEe
Q 025908          209 SRQVFNI  215 (246)
Q Consensus       209 ~~~~~~~  215 (246)
                      .|++|++
T Consensus       195 ~G~~~~v  201 (202)
T 3d7l_A          195 TGESYQV  201 (202)
T ss_dssp             CSCEEEE
T ss_pred             cCceEec
Confidence            5778876

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.79  E-value=3.3e-18  Score=130.68  Aligned_cols=196  Identities=14%  Similarity=0.202  Sum_probs=132.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ........++.++.+|++|++++.+++++     .++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     01111134689999999999998888763     27999


Q ss_pred             EEecCCCCc-c--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREA-D--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~-~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++... .                    +..++++++    .  +..++|++||...+...         +..+...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~  164 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA  164 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence            999998643 1                    122233332    2  56799999997764221         1122234


Q ss_pred             c-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...|.+++.       .+++++++||+.++++...... ...+........+.         ..+++++|+|+++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  235 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence            5 899999887642       6899999999999998532011 11222333332221         2367899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +.++...  ...+++|++.++.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            9998653  3467899999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.79  E-value=7.1e-19  Score=134.84  Aligned_cols=196  Identities=14%  Similarity=0.122  Sum_probs=121.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     .+......++.++.+|+++.+++.+++++      .++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999765421110     01111124688999999999988888753      4799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||++|....                    ++.++++++    +  +..++|++||...+...           .+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  163 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI  163 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------CCCch
Confidence            99999986321                    122344443    2  67899999998775321           12234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...|.+.+       ..+++++++||+.++++.........+.......         .....+++++|+|++++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence            5 89999987764       2489999999999999853211101111111110         11124678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeee
Q 025908          201 QVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      .++..+  ...|+++++.++..+
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHcCccccCccCcEEEEcCCccc
Confidence            998643  346889999998653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.79  E-value=3.1e-19  Score=137.85  Aligned_cols=214  Identities=19%  Similarity=0.143  Sum_probs=146.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhc---CceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     +.....   ..+.++.+|++|++++.+++++.     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQ-----ELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998655321110     000111   27889999999999988888642     7


Q ss_pred             ccEEEecCCCC-cc--------------------chHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGRE-AD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~-~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|++||+||.. ..                    +...+++++.      +..++|++||...+...           .+
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  160 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-----------RW  160 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----------TT
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-----------CC
Confidence            89999999961 10                    1223333321      34599999998875321           12


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+.++..... .............++         ..+.+++|+|
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva  231 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVA  231 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2345 89999988764       3579999999999988731100 001112222222222         2355699999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeec-HHHHHHHHHHHhCCCcc
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVT-FDGLARACAKVTGYCIA  239 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s-~~~l~~~~~~~~g~~~~  239 (246)
                      ++++.++...  ...|+.+++.+|..++ ..++.+.+.+.+|.+..
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~  277 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL  277 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence            9999998653  3468999999998776 77889999999987654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.78  E-value=1.1e-18  Score=132.58  Aligned_cols=194  Identities=19%  Similarity=0.167  Sum_probs=130.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.........     ... ...++.++.+|++|++++.+++++     .++|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhh-ccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211000     000 014789999999999998888863     25999


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||+++....                        .++.+++.+.  +. .++|++||...+...           .+...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  154 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence            9999986321                        1233445544  44 799999998775321           12234


Q ss_pred             c-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|...|.+.+         ..+++++++||+.++++..... ....... ....       ......+++++|+|++
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~-~~~~-------~~~~~~~~~~~dva~~  225 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAM-SQRT-------KTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHH-TSTT-------TCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhH-HHhh-------cCCCCCCcCHHHHHHH
Confidence            5 88998887653         4589999999999998731110 0000000 0001       0111247889999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCee
Q 025908          199 FVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++.++..+  ...|+.+++.++..
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCcccccccCcEEEECCCcc
Confidence            99999653  24688999998753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.78  E-value=2.7e-19  Score=136.58  Aligned_cols=201  Identities=17%  Similarity=0.183  Sum_probs=134.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+.        .......+.++.+|++|++++.+++++.     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQA--------AAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976552211        1112357889999999999888887643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC------C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +..++++++.      + ..++|++||...+..           ..+...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------EALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------CCCChH
Confidence            9999997321                    1223444322      2 458999999877422           112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCC---CcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR---PIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+.+       ..+++++.++|+.++++...  ....++.......   ......+......+.+++|+|+
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD--GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH--HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh--hhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            5 89999988764       35899999999999998411  0111111111110   0000111122345788999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      +++.++...  ...|++|++.+|..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            999988643  3468999999987543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.78  E-value=1.9e-18  Score=131.55  Aligned_cols=193  Identities=14%  Similarity=0.191  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....        ......+ .++.+|++|.+++.+++++    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRAA--------QELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865421110        0112345 8899999999998888753    37999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    +    ++.++..+.  +..++|++||...+...         +..|...|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y  159 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY  159 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence            9999986321                    1    222333333  57899999998775321         11222345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...|.+.+       ..+++++++||+.++++...... ...+...+....+.         ..+++++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM---------GRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence             89999987764       24899999999999987311000 01122222222111         24678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...|+.+++.++.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCcccccccCCEEEECCCE
Confidence            998653  3468899998874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.78  E-value=1.6e-18  Score=132.67  Aligned_cols=197  Identities=14%  Similarity=0.175  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+.... ..++.++.+|++|++++.+++++.     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     001111 246888999999999888887642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +...++++    +.  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI  156 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence            99999986321                    12223333    32  56899999998875321           12233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch----------HHHHHHHHHhC-CCcccCCCCCceeee
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAG-RPIPIPGSGIQVTQL  189 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~  189 (246)
                      | .+|...+.+.+       ..+++++.+||+.+++|......          ...+....... .+         ...+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~  227 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP---------IKRF  227 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT---------TCSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC---------CCCC
Confidence            5 89999887663       36899999999999987311000          00011111111 11         1247


Q ss_pred             eeHHHHHHHHHHHhcCCC--CCCeeEEeeCCeeec
Q 025908          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (246)
                      .+++|+|++++.++..+.  ..|++|++.++..++
T Consensus       228 ~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          228 ASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             cCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            789999999999987542  468899999987554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.78  E-value=2.6e-18  Score=131.07  Aligned_cols=189  Identities=13%  Similarity=0.085  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+.+.          ..++.++.+|++|.+++.+++++     .++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR----------QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH----------HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----------hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321111          23588999999999988888764     27999


Q ss_pred             EEecCCCCcc-------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~-------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||....                   +...++++    +.  +..++|++||...+..           ..+...| 
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  171 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------SSKHIAYC  171 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------CSSCHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------CCCcHhHH
Confidence            9999986421                   12223333    22  4579999999876522           1122345 


Q ss_pred             ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 ~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|...+.+.+.      .+++++.++|+.+.++....   ...........+.         ..+.+++|+|++++.++
T Consensus       172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            899998877642      35999999999988763211   1111111111111         12445899999999999


Q ss_pred             cCCCCCCeeEEeeCCeeec
Q 025908          204 GNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s  222 (246)
                      +.....|+++++.+|..++
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            7777789999999987554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.78  E-value=1.1e-17  Score=128.38  Aligned_cols=191  Identities=16%  Similarity=0.120  Sum_probs=133.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....        .....++.++.+|++|.+++.+++++.     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGAA--------ASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH--------HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876632111        112357889999999999988888642     7999


Q ss_pred             EEecCCCCcc----------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||+++....                      +...+++++    .  +..++|++||...+..           ..+..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------YDMST  157 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------CSSCH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------CCCCh
Confidence            9999986511                      122233333    2  5679999999877522           12233


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..|++++.++|+.++++..................+.         ..+.+++|+|+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            45 89999987763       3689999999999999864322222233333222222         1255689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +.++...  ...|+++++.+|.
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCcccCCcCCCEEEECCCc
Confidence            9998653  3468999999983

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.77  E-value=3.7e-19  Score=136.27  Aligned_cols=204  Identities=16%  Similarity=0.157  Sum_probs=126.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc---CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+...   .+... .........++.++.+|++|.+++.++++..     +
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP-GSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSR   91 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654221   11100 0000000146889999999999988888632     3


Q ss_pred             c-cEEEecCCCCcc--------------------chHHHHHhCC------C-CceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 F-DVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~-d~vi~~~~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      + |+|||+++....                    +..++++++.      + ..++|++||...+...           .
T Consensus        92 i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  160 (264)
T 2pd6_A           92 PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----------V  160 (264)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----------T
T ss_pred             CCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----------C
Confidence            4 999999986421                    1233444432      3 5689999997654221           1


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      +...| .+|...|.+.+       ..+++++++||+.++++.... ....+........         ....+.+++|+|
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva  230 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVA  230 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHH
Confidence            23345 89998887653       268999999999999985321 1111111111111         112467899999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeecHHHH
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGL  226 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~l  226 (246)
                      ++++.++..+  ...++.+++.++..++....
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            9999998653  34688999999876655443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.77  E-value=1.4e-18  Score=132.28  Aligned_cols=194  Identities=15%  Similarity=0.212  Sum_probs=110.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+.......+.++.+|++|++++.+++++.     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765522111     111112357889999999999888887642     7999


Q ss_pred             EEecCCCCc----------c-------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREA----------D-------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~----------~-------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +||++|...          .             +    ++.++..+.  +..++|++||...+..             ..
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~  156 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY-------------SN  156 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC-------------Cc
Confidence            999998721          0             1    222333333  5678999999887521             11


Q ss_pred             CccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .|..+|...+.+.+       ..+++++.++|+.++++.........+...+....         ....+.+++|+|+++
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHHH
Confidence            24489998887763       24799999999999987432211111111111111         123355689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCeee
Q 025908          200 VQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +.++...  ...|++|++.+|..+
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC------
T ss_pred             HHHcCccccCCCCCEEEECCCeec
Confidence            9998653  336899999998754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.77  E-value=2.9e-18  Score=129.88  Aligned_cols=194  Identities=18%  Similarity=0.229  Sum_probs=133.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+.....+.+.    ........++..+.+|++|.+++.+++++.     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV----EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886533211110    111112357889999999999988888643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +..++++++    .  +..++|++||...+...           .+...|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----------PGQANY  154 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            9999986421                    223344443    2  56799999997765321           122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............++         ..+.+.+|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~  224 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       468999999999999875322 223333343333332         235568999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..+  ...|+.+++.+|.
T Consensus       225 l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTS
T ss_pred             HhCccccCCCCCEEEeCCCc
Confidence            98653  3458999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.77  E-value=2.1e-18  Score=131.55  Aligned_cols=194  Identities=19%  Similarity=0.228  Sum_probs=131.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+ ..+.....     .+......++.++.+|++|++++.+++++.     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998 44421110     011111347889999999999988888642     799


Q ss_pred             EEEecCCC-Ccc--------------------chHHHHHh----CC--C--C---ceEEEEeecceeccCCCCCCCCCCC
Q 025908           75 VVYDINGR-EAD--------------------EVEPILDA----LP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        75 ~vi~~~~~-~~~--------------------~~~~l~~a----~~--~--~---~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                      +|||+++. ...                    +...++++    +.  +  .   .++|++||...+..          +
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  157 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------G  157 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------C
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------C
Confidence            99999986 211                    11122222    21  2  2   78999998776531          1


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      ..+...| .+|...|.+.+       ..+++++++||+.++++..... ...+......+.+.         ..+++++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~d  227 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIPM---------GRFGTAEE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCTT---------CSCBCGGG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCCC---------CcCCCHHH
Confidence            1123345 89999988764       2489999999999999753221 12233333332221         25788999


Q ss_pred             HHHHHHHHhcCC---CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE---KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~---~~~~~~~~~~~~~  219 (246)
                      +|++++.++.++   ...+++|++.++.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            999999998653   3368899999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.77  E-value=5.8e-18  Score=128.76  Aligned_cols=190  Identities=15%  Similarity=0.166  Sum_probs=128.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .....++.++.+|++|++++.+++++.     ++|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA--------AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110        111246888999999999888877642     5899


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                        .++.++..++  + .++|++||...+..           ..+...|
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  151 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----------IEQYAGY  151 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-----------CCCCccH
Confidence            9999986421                        1233444444  5 89999999877532           1122335


Q ss_pred             -ccHHHHHHHHHh-------c--CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc-c-cCC--CCCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-P-IPG--SGIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~~-------~--~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~i~~~D~  195 (246)
                       .+|...+.+.+.       .  +++++++||+.++++..     .    ........ . +..  .......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  222 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM-----Q----ASLPKGVSKEMVLHDPKLNRAGRAYMPERI  222 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH-----H----HHSCTTCCHHHHBCBTTTBTTCCEECHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh-----h----hccchhhhHHHHhhhhccCccCCCCCHHHH
Confidence             899998877642       3  89999999999988721     1    00000000 0 000  00111347889999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      |++++.++..+  ...|+.+++.++.
T Consensus       223 A~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          223 AQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999998654  3468899998874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.77  E-value=1.9e-18  Score=132.25  Aligned_cols=192  Identities=15%  Similarity=0.144  Sum_probs=128.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......        ....++.++.+|++|.+++.+++++.     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA--------GLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211110        01136788999999999988887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||++|....                    +...++++    +.  + ..++|++||...+..           ..+...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------APLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------CCCchh
Confidence            9999986321                    11223333    21  3 579999999776421           112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-----H-----HHHHHHHHhCCCcccCCCCCceeeee
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      | .+|...+.+.+       ..+++++++||+.++++......     .     ...........         ....++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~  229 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCc
Confidence            5 89998887664       25899999999999886310000     0     00111111111         112478


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +++|+|++++.++..+  ...|+++++.+|..
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            8999999999999653  34688999998854

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.77  E-value=2e-19  Score=132.81  Aligned_cols=164  Identities=20%  Similarity=0.136  Sum_probs=119.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-CCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~   79 (246)
                      |||+|++|+++++.|+++  +|++++|+..+.....        .. ... .++.+|++|++++.+++++ .++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~--------~~-~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAELA--------RE-VGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH--------HH-HTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH--------Hh-ccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  9999999765421100        00 112 7889999999999988863 379999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHH
Q 025908           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      ++....                    ++.++++++.  +..++|++||...+.+.           .+...| .+|...|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHH
Confidence            986421                    2345677776  56899999998886321           223345 8999998


Q ss_pred             HHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       137 ~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      .+++.       .+++++++||+.++++..             .       +.+.....+++++|+|++++.+++++.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            87642       589999999999988730             0       011223578999999999999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.6e-17  Score=126.58  Aligned_cols=194  Identities=12%  Similarity=0.160  Sum_probs=127.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+.....+....        ....+.++.+|++|.+++.+++++.     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987764322221        1357889999999999888887642     7999


Q ss_pred             EEecCCCCcc------------------------chHHHHHh----CC--------CCceEEEEeecceeccCCCCCCCC
Q 025908           76 VYDINGREAD------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a----~~--------~~~~~i~~Ss~~v~~~~~~~~~~e  119 (246)
                      +||+||....                        +...++++    +.        +..++|++||...+...       
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-------  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-------  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------
Confidence            9999986421                        11222332    21        23579999998775321       


Q ss_pred             CCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                          .+...| .+|...+.+.+       ..|++++.++|+.+.++.... ............  .+.      ...+.+
T Consensus       158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~--~p~------~~r~~~  224 (257)
T 3tpc_A          158 ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAAS--VPF------PPRLGR  224 (257)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CC--SSS------SCSCBC
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhc--CCC------CCCCCC
Confidence                122335 89988887653       368999999999998874211 111111111111  111      024678


Q ss_pred             HHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      ++|+|++++.++......|+.+++.+|..++
T Consensus       225 ~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          225 AEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            9999999999998776789999999987654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.76  E-value=5.3e-18  Score=131.59  Aligned_cols=220  Identities=14%  Similarity=0.038  Sum_probs=143.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||.++++.|+++|++|++++|+..+.......        ...++.++.+|++|.+++.+++++. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART--------MAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------SSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999987663222111        1357899999999999999999854 68999999


Q ss_pred             CCCCc------------------cchHHHHHhCC--CCceEEEEeecceeccCCC-CC-CCCCCCCCCCCcc-ccHHHHH
Q 025908           80 NGREA------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LP-HCETDTVDPKSRH-KGKLNTE  136 (246)
Q Consensus        80 ~~~~~------------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~-~~-~~e~~~~~~~~~~-~~k~~~e  136 (246)
                      ||...                  .+...+++++.  ..+++|++||...+..... .. ..+..+..+...| .+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            98632                  12344556544  4569999999887643221 11 1111223333446 8999988


Q ss_pred             HHHH-------hcC--CceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       137 ~~~~-------~~~--~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      .+.+       ..+  ++++.++||.+..+..... ...+....     ...    ...+-..+++|+|+.++.++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~-----~~~----~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDAL-----MSA----ATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHH-----HHH----HHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7653       235  9999999999987642111 00010000     000    011223458999999999998776


Q ss_pred             CCCeeEEeeCCee---------------ecHHHHHHHHHHHhCCCc
Q 025908          208 ASRQVFNISGEKY---------------VTFDGLARACAKVTGYCI  238 (246)
Q Consensus       208 ~~~~~~~~~~~~~---------------~s~~~l~~~~~~~~g~~~  238 (246)
                      ..|+.+.+.+|..               -...++++...+.+|...
T Consensus       244 ~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~  289 (291)
T 3rd5_A          244 PGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEF  289 (291)
T ss_dssp             CTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcccc
Confidence            6788888765421               124578888877777654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.76  E-value=2.6e-18  Score=130.87  Aligned_cols=196  Identities=13%  Similarity=0.075  Sum_probs=128.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+ .+..        ... .. .++.+|++|.+++.+++++.     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EAI-GG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HHH-TC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HHh-hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654 2111        011 13 78899999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +..+++++    ++  +..++|++||...+...           .+...|
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  149 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY  149 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCChhH
Confidence            9999986421                    12223333    22  56799999997764211           122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH-hCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.     ....+.... ................+++++|+|++++
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             89999887764       358999999999987752     111100000 0010000011112235789999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeeecH
Q 025908          201 QVLGNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      .++..+  ...++.+++.++...++
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            998654  34688999999876544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=8.5e-19  Score=134.44  Aligned_cols=204  Identities=16%  Similarity=0.180  Sum_probs=135.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc---CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+...   .+....      ...++.++.+|++|++++.+++++     .+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF------EPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   86 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS------CGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc------CCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998654211   011000      024688999999999998888864     26


Q ss_pred             ccEEEecCCCCcc----------------chHHHHHhCC--C---CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           73 FDVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        73 ~d~vi~~~~~~~~----------------~~~~l~~a~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +|++||++|....                .++.++.++.  +   ..++|++||...+...           .+...| .
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~  155 (267)
T 2gdz_A           87 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCA  155 (267)
T ss_dssp             CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHH
T ss_pred             CCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCCchHHH
Confidence            8999999986421                1334455554  2   5799999998775321           112235 8


Q ss_pred             cHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCccc---CCCCCceeeeeeHHHHHHH
Q 025908          131 GKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       131 ~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~  198 (246)
                      +|...+.+.+         ..+++++.++|+.+.++..     ..+............   .........+++++|+|++
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  230 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL-----ESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  230 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH-----HGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh-----hccccccccchhhhHHHHHHHHhccccCCCHHHHHHH
Confidence            8988876654         3589999999999877621     000000000000000   0000012346789999999


Q ss_pred             HHHHhcCCCCCCeeEEeeCCeeecHHHH
Q 025908          199 FVQVLGNEKASRQVFNISGEKYVTFDGL  226 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l  226 (246)
                      ++.++.++...|+++++.+++.+++.|+
T Consensus       231 v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          231 LITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             HHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            9999987667889999999888776553

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.76  E-value=1.5e-17  Score=126.71  Aligned_cols=197  Identities=18%  Similarity=0.243  Sum_probs=129.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.....  .     .+......++.++.+|++|++++.+++++.     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA--L-----AEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHH--H-----HHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH--H-----HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765210  0     011111246888999999999988888642     7999


Q ss_pred             EEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                        .++.++..++  +..++|++||...+...           .+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence            9999986421                        1223344443  56899999998775321           112335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHH-HHHhCC-C----cccCCCCCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGR-P----IPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~~~~~~i~~~D~  195 (246)
                       .+|...+.+.+       ..+++++.++|+.++++..     ..... ....+. .    ..+.........+++++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  226 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV-----QKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHL  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH-----HHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch-----hhhcccccccccchHHHHHHHHhccCCCCCCcCHHHH
Confidence             88999887664       2589999999999988731     11110 000000 0    0000111122357899999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |++++.++..+  ...|+.|++.++..
T Consensus       227 A~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          227 GELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            99999998653  24588999998753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.76  E-value=1.6e-17  Score=128.23  Aligned_cols=211  Identities=15%  Similarity=0.127  Sum_probs=135.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhcC--
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--   71 (246)
                      |||+|.||+++++.|+++|++|++++|+.............       .........+.++.+|++|.+++.+++++.  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999975432111110000       011122457889999999999988888642  


Q ss_pred             ---CccEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           72 ---GFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        72 ---~~d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                         ++|++||+||....                    +...++++    +.  +..++|++||...+..           
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  164 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA-----------  164 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC-----------
Confidence               79999999986421                    12233333    22  5679999999877522           


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc-----ccCCCCCceeee
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-----PIPGSGIQVTQL  189 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  189 (246)
                      ..+...| .+|...+.+.+       ..|++++.++|+.+++|..........+.........     ...........+
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence            1122345 89999887653       3589999999999999853321110000000000000     000001122457


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      .+++|+|++++.++...  ...|+++++.+|...+
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            88999999999999754  3468999999987544

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=7.2e-18  Score=128.28  Aligned_cols=191  Identities=16%  Similarity=0.142  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+...        ....++.++.+|++|++++.+++++.     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221111        11246888999999999888877632     7999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  151 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------CCCchhH
Confidence            9999986421                    0    123444444  5689999999877522           1122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee-eHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~  200 (246)
                       .+|...+.+.+       ..+++++.+||+.++++.         .... ................+. +++|+|++++
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---------~~~~-~~~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---------TAET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHH-TCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc---------cccc-chhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             89999887653       358999999999998862         1111 111000001111112356 8999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCee
Q 025908          201 QVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      .++..+  ...|+.+++.++..
T Consensus       222 ~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCCCCEEEECCCcc
Confidence            998653  34688999998853

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.76  E-value=4.8e-18  Score=128.83  Aligned_cols=193  Identities=15%  Similarity=0.181  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ..... ....+.++.+|+.|++++.+++++.     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999765421100     00000 1346889999999999998888642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||+++....                    ++.+++++    +.  +..++|++||...+...           .+...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  156 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN  156 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence            99999986421                    12222233    22  56899999997654221           11223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...|.+.+       ..+++++++||+.++++.... ....+........+.         ..+++++|+|++++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  226 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIPL---------GRFGSPEEVANVVL  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCCC---------CCccCHHHHHHHHH
Confidence            4 88998887653       358999999999999874221 111122222222111         24778999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...|++|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            998653  3458899998863

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.76  E-value=4.7e-18  Score=130.77  Aligned_cols=195  Identities=18%  Similarity=0.159  Sum_probs=128.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|......+.+.    .+......++.++.+|++|++++.+++++.     ++|+
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999994322111000    011111356889999999999988887632     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeeccee-ccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      |||+++....                    +..+++++    ++...++|++||...+ ...           .+...| 
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~  171 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----------PNHALYA  171 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----------CSCHHHH
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----------CCCchHH
Confidence            9999986421                    12233333    2212699999998775 221           122335 


Q ss_pred             ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCC-----------chH-HHHHHHHHhCCCcccCCCCCceeeee
Q 025908          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       130 ~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      .+|...|.+++.       .+++++++||+.++++....           ... ...........         ....++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  242 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN---------PLKRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---------TTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC---------CCCCcc
Confidence            899999887642       48999999999998762100           000 11111111111         123578


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCeeEEeeCCe
Q 025908          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~~~~~~  219 (246)
                      +++|+|++++.++..+.  ..|++|++++|.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999997532  367899998873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=7.3e-18  Score=127.67  Aligned_cols=190  Identities=14%  Similarity=0.118  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..... .         ..++.++.+|++|++++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999865532111 1         136889999999999988776543 79999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      +|....                    +...++++    +.  +..++|++||...+...          ..+...| .+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~~sK  151 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTK  151 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccHHHHH
Confidence            986421                    11223333    22  56799999997764221          1022335 899


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCch-----HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ...|.+.+       ..+++++++||+.++++......     ............+         ...+.+++|+|++++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~  222 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence            99988764       24899999999999987310000     0111111111111         123678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...|+.+++.++.
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            998653  3468899998874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.76  E-value=4.1e-18  Score=130.33  Aligned_cols=182  Identities=17%  Similarity=0.165  Sum_probs=126.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+                ..++.++.+|++|.+++.+++++.     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                246788999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------TKNASAY  146 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------CCCchhH
Confidence            9999986321                    1    222333333  5679999999877532           1122345


Q ss_pred             -ccHHHHHHHHHh----cC--CceEEeecceeeCCCCCCchH-------H----HHHHHHHhCCCcccCCCCCceeeeee
Q 025908          130 -KGKLNTESVLES----KG--VNWTSLRPVYIYGPLNYNPVE-------E----WFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       130 -~~k~~~e~~~~~----~~--~~~~ilR~~~i~g~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                       .+|...+.+.+.    .+  ++++.++|+.+.++.... ..       .    ..........         ....+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~  216 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK-AAELEVGSDPMRIEKKISEWGHEH---------PMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH-HHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh-hhhcccccCchhhHHHHHHHHhcC---------CCCCCcC
Confidence             899999877642    22  899999999987752100 00       0    0011111111         1124778


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++|+|++++.++..+  ...|+.+++.++.
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            999999999998653  3468899998875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.76  E-value=2.9e-17  Score=124.66  Aligned_cols=192  Identities=14%  Similarity=0.050  Sum_probs=121.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+...     .          ..++..+.+|++|++++.+++++.     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E----------QYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S----------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h----------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998643     1          123788999999999988888642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...+++++    +  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----------RIGMSAY  146 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCCchH
Confidence            9999986321                    122333333    2  5679999999877421           1122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHH-HHHH-HHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                       .+|...+.+.+       ..++++++++|+.++++........ .... .......  ..........+.+++|+|+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHH
Confidence             89999988764       3589999999999998742111000 0000 0000000  000001112467899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCee
Q 025908          200 VQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +.++..+  ...|+.+.+.++..
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCcc
Confidence            9998653  34688999988753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.75  E-value=3.7e-18  Score=130.30  Aligned_cols=186  Identities=16%  Similarity=0.156  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....        ......+.++.+|++|++++.+++++.     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110        011235888999999999988887632     7999


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +.    +.++..+.  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  153 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence            9999986321                    11    33444443  56899999998775321           122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++++||+.++++...  .         ....+.    ......+.+++|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHH
Confidence             89999887764       26899999999999987421  0         001010    0111346789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++..+  ...|+.+++.++..
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCccccCCcCCEEEECCCee
Confidence            98653  23588999999864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.75  E-value=1.3e-17  Score=127.35  Aligned_cols=195  Identities=16%  Similarity=0.126  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++| +........     ........++.++.+|++|.+++.+++++.     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 433211100     001111346888999999999888877642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|||+++....                    +...++++    +.  + ..++|++||...+.           +..+..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  156 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFV  156 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCCCcc
Confidence            99999986321                    12222332    22  3 57999999976642           222333


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      .| .+|...+.+.+       ..+++++++||+.++++...... .......+....+         ...+++++|+|++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  227 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence            45 89988877653       35899999999999987421100 0111112211111         1246789999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCee
Q 025908          199 FVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++.++...  ...|+.+++.++..
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCcc
Confidence            99998643  34688999998864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.75  E-value=1.1e-17  Score=127.42  Aligned_cols=198  Identities=15%  Similarity=0.119  Sum_probs=133.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110     111122357889999999999888877642     7999


Q ss_pred             EEecCCCCcc-------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~-------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||....                   +...++++    +.  +..++|++||...+..           ..+...| 
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  161 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----------NVRMASYG  161 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----------CCCchHHH
Confidence            9999986421                   12233333    22  4569999999876421           1122345 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.++|+.+.++..................++         ..+.+++|+|++++.+
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            89999887764       3589999999999887621000011112222222221         2366799999999999


Q ss_pred             hcCC--CCCCeeEEeeCCeeecH
Q 025908          203 LGNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      +...  ...|+++++.+|...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            8643  34689999999876554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.74  E-value=6.5e-18  Score=129.03  Aligned_cols=197  Identities=13%  Similarity=0.122  Sum_probs=131.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     .+.......+..+.+|++|.+++.+++++.     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     011111346888999999998888777532     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                     +...++++    ++  +..++|++||...+..           ..+...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  163 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----------FPNLGP  163 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------CCCchh
Confidence            9999986320                     11222233    32  5679999999887532           112334


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++.....+. ..........  .       ....+.+++|+|+++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~v  234 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES--L-------RIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH--H-------TCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHH
Confidence            5 89999888764       248999999999998874210000 0000111110  0       112467899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCeeec
Q 025908          200 VQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      +.++..+  ...++++++.+|...+
T Consensus       235 ~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHcCcccCCccCCEEEECCCcccc
Confidence            9998654  2368899999987654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.74  E-value=1.6e-17  Score=125.82  Aligned_cols=192  Identities=17%  Similarity=0.201  Sum_probs=121.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++ .|+........     ........++.++.+|++|++++.+++++.     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-----EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-----HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 45443311100     011111356889999999999988887642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecce-eccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|||++|....                    +..+++++    +.  +..++|++||... ++.            .+..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~  153 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------AGQA  153 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCc
Confidence            99999986321                    11222333    32  5679999999754 321            1123


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...|.+.+       ..++++++++|+.+.++.... .............+         ...+++++|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  223 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------LKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------TSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------CCCCCCHHHHHHHH
Confidence            35 89999887764       248999999999987752110 11111222222211         12477899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +.++..+  ...+++|+++++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            9988653  2467899999875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.74  E-value=7e-18  Score=127.69  Aligned_cols=193  Identities=13%  Similarity=0.200  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEE-EEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|+||+++++.|+++|++|+++ .|+..+.....     ........++.. +.+|++|.+++.+++++     .++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999998 67654421100     001111235566 89999999988887653     279


Q ss_pred             cEEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |+|||++|....                    +    ++.+++++.  +..++|++||...+...           .+..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~  150 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA  150 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence            999999986421                    1    333444443  67899999997654221           1123


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..+++++++||+.++++.... .............+         ...+++++|+|+++
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            35 88998877653       248999999999998863111 11112222222211         12467899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCe
Q 025908          200 VQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +.++..+  ...++.|++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            9998653  2358899998874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.74  E-value=4e-17  Score=126.50  Aligned_cols=196  Identities=17%  Similarity=0.200  Sum_probs=133.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhc-CceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+...     +..... ..+.++.+|++|.+++.+++++.     ++|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTA-----ELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH-----HHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998766321110     001111 47889999999999888877642     789


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                    +...+++++    .  +..++|++||...+..          +..+...
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----------~~~~~~~  191 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----------GYPGWSH  191 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----------BCTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----------CCCCCHH
Confidence            99999986321                    233445554    2  5679999999764200          1112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..|++++.++|+.++++.... ....+........++.         .+...+|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMG---------MLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            5 89999887664       368999999999999873110 1122223333332221         2446899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeee
Q 025908          201 QVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      .++...  ...|+++++.+|..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            998643  356899999998654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.74  E-value=2.5e-17  Score=126.26  Aligned_cols=193  Identities=19%  Similarity=0.204  Sum_probs=131.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.......+.    .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV----AAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999985433211110    111112357889999999999988887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...++++    +.  +..++|++||...+...           .....|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  178 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN-----------PGQANY  178 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCchhH
Confidence            9999987421                    12223333    22  55699999997764321           112335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++.... .   .........++         ..+.+++|+|++++.
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~---~~~~~~~~~p~---------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE-L---AAEKLLEVIPL---------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-H---HHHHHGGGCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc-c---cHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             89998887653       368999999999998874221 1   11222222221         235678999999999


Q ss_pred             HhcCC---CCCCeeEEeeCCeee
Q 025908          202 VLGNE---KASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~---~~~~~~~~~~~~~~~  221 (246)
                      ++.++   ...|+++++.+|..+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            99763   346899999998654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.74  E-value=3.7e-17  Score=124.04  Aligned_cols=192  Identities=13%  Similarity=0.156  Sum_probs=124.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+. .+..+        .......++.++.+|++|++++.+++++     .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 33211        1111235688899999999988887653     2799


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.++..++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH  153 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCchh
Confidence            99999986421                    1    222333343  56899999998775321           12233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++.......... ..... . +..     ....+.+++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~-~-~~~-----~~~~~~~p~dva~~~~  225 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP-N-MLQ-----AIPRLQVPLDLTGAAA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C-TTS-----SSCSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH-H-hhC-----ccCCCCCHHHHHHHHH
Confidence            5 89999887764       258999999999998874210100000 00000 0 100     1124678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...|+.+++.++.
T Consensus       226 ~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          226 FLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHcCcccCCCCCcEEEECCCc
Confidence            998643  3468899998874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.74  E-value=7.4e-18  Score=129.04  Aligned_cols=201  Identities=15%  Similarity=0.208  Sum_probs=133.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     +. .....++.++.+|++|.+++.+++++     .++|
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   94 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE-----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS   94 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH-----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHH-----HHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999997654221110     00 01135788999999999988887763     2599


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhCC------C-CceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|||++|....                    +..++++++.      + ..++|++||...+.....    ...+..+..
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~  170 (265)
T 1h5q_A           95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV  170 (265)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence            99999986421                    1223444432      2 478999999876432110    011222344


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...|.+++       ..+++++++||+.++++..... ............++         ..+++++|+|+++
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~  240 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPL---------NRFAQPEEMTGQA  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcc---------cCCCCHHHHHHHH
Confidence            45 89999988764       2489999999999998742211 11222222222211         2367899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCee
Q 025908          200 VQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +.++..+  ...|+.|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            9998653  34688999999854

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.74  E-value=2.1e-16  Score=121.77  Aligned_cols=211  Identities=14%  Similarity=0.130  Sum_probs=136.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhcC--
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--   71 (246)
                      |||+|.||.++++.|+++|++|+++.|+.............       .........+.++.+|++|++++.+++++.  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999874321111100000       111122467899999999999988888642  


Q ss_pred             ---CccEEEecCCCCcc----------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           72 ---GFDVVYDINGREAD----------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        72 ---~~d~vi~~~~~~~~----------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                         ++|++||+||....                +...++++    +.  + ..++|++||...+....       .+..+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~~~  171 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-------SADPG  171 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-------CSSHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-------cCCCC
Confidence               79999999997422                12233333    22  2 46899999987642210       11112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHH-HHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+.++..........+. ................ ..+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            2235 89999887754       35799999999999998643322222222 2222222222222222 5688999999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++.++...  ...|+++++.+|.
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhCcccccccCCEEeECCCc
Confidence            9999998643  3578899999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.74  E-value=1.4e-17  Score=129.06  Aligned_cols=197  Identities=20%  Similarity=0.233  Sum_probs=131.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.........    .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211110    001112357889999999999888877642     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD---------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+++....                     +...++++    +++..++|++||...+....           ....| 
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~  197 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------TLIDYS  197 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------TCHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------CChhHH
Confidence            9999986321                     12234443    23345899999988763211           12235 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.++|+.++++..............         ........+.+++|+|++++.+
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHH
Confidence            89999887653       3589999999999988731000000111111         1111223466799999999999


Q ss_pred             hcCC--CCCCeeEEeeCCeee
Q 025908          203 LGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       203 ~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +...  ...|+++++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            8653  356889999988643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.74  E-value=6.4e-17  Score=122.72  Aligned_cols=191  Identities=15%  Similarity=0.145  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+.        .......+.++.+|+++.+++.+++++. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            79999999999999999999999999976552211        1112357889999999999999988754 69999999


Q ss_pred             CCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ||....                    +...++++    +.  +..++|++||...+...           .+...| .+|
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCCchhHHHH
Confidence            986321                    12233333    22  55699999998775321           122345 899


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ...+.+.+       ..+++++.++|+.+.++..... ............+         ...+.+++|+|++++.++.+
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~  230 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL-NEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASN  230 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-CHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCC
Confidence            98887653       3589999999999988742211 1122222222221         12466799999999999975


Q ss_pred             C--CCCCeeEEeeCCee
Q 025908          206 E--KASRQVFNISGEKY  220 (246)
Q Consensus       206 ~--~~~~~~~~~~~~~~  220 (246)
                      +  ...|+.+++.+|..
T Consensus       231 ~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 NASYITGQTLHVNGGML  247 (249)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCEe
Confidence            3  34689999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.74  E-value=2.3e-17  Score=127.31  Aligned_cols=204  Identities=18%  Similarity=0.204  Sum_probs=128.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+.......+.    ...... ...+.++.+|++|.+++.+++++.     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999985433111100    000011 357889999999999988887642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                    +...+++++    .  +..++|++||...+..           ......
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  175 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-----------SPFKSA  175 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC-----------CCCchH
Confidence            99999997421                    122334432    2  5578999999776422           112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHH-HHHHhCCC-cccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRP-IPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|...+.+.+       ..|++++.++|+.+.++........... ........ ............+.+++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            5 89999887753       3589999999999998742211100000 00000000 0011222334568899999999


Q ss_pred             HHHHhcCCC--CCCeeEEeeCCe
Q 025908          199 FVQVLGNEK--ASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (246)
                      ++.++....  ..|+++++.+|.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCc
Confidence            999997542  468899999884

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.74  E-value=2.5e-17  Score=126.11  Aligned_cols=198  Identities=14%  Similarity=0.184  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+.....+.+..    .......++.++.+|++|.+++.+++++.     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKE----TYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH----HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999998876542211110    01112357899999999999988888643     7999


Q ss_pred             EEecCCCC--c--------------------cchHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGRE--A--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~--~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||+||..  .                    .+...+++++    +  +..++|++||.+.++..         +..+..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~~~~  159 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------GWIYRS  159 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------CCTTCH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------CCCCCc
Confidence            99999931  1                    1223344443    3  56799999987553211         112233


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..+++++.++|+.++++..... ............         ....+.+++|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHNT---------PIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhcC---------CCCCCcCHHHHHHHH
Confidence            45 89998887653       3689999999999998753222 221111111111         122466799999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCeee
Q 025908          200 VQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +.++...  ...|+++++.+|...
T Consensus       230 ~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          230 SFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             HHHcCcccCCCCCcEEEEcCceee
Confidence            9999753  346899999998653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.73  E-value=4.8e-17  Score=124.25  Aligned_cols=196  Identities=18%  Similarity=0.204  Sum_probs=132.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     +.... ..++.++.+|++|++++.+++++.     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVA-----DLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998655321110     01111 157899999999999888877642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                    +...++++    +.  +..++|++||.....          .+..+...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~~~~~  160 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYPGWSH  160 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCCCChh
Confidence            99999986421                    12223333    32  567999999876420          01112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..|++++.++|+.++++..... ...+........+.         ..+.+++|+|++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN-GEEYIASMARSIPA---------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT-CHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 89999987764       2689999999999988631111 11222333222222         12567899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeee
Q 025908          201 QVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      .++...  ...|+++++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            998653  357899999998653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.73  E-value=3.7e-17  Score=125.30  Aligned_cols=196  Identities=17%  Similarity=0.218  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+....  ..++.++.+|++|.+++.+++++.     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     000111  246888999999999988887642     79


Q ss_pred             cEEEecCCCCcc-c------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        74 d~vi~~~~~~~~-~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |++||++|.... .                        ++.++..+.  +..++|++||...+..           ..+.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  162 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------IGNQ  162 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------CSSB
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------CCCC
Confidence            999999986422 0                        123334443  5689999999876421           1122


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-------chHHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.++++....       ..............         ....+.+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  233 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN---------PSKRYGE  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------TTCSCBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------CCCCCcC
Confidence            335 89998887654       358999999999998762100       00000000111111         1123678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++|+|++++.++..+  ...|+.+++.+|..+
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            999999999998653  346889999988543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.73  E-value=3.7e-17  Score=124.83  Aligned_cols=203  Identities=15%  Similarity=0.202  Sum_probs=128.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhc----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     +....  ..++.++.+|++|++++.+++++    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS-----RIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999997654211100     00000  12688999999999988888763    2499


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.++..+.  +..++|++||...+..           ..+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  156 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----------WQDLAL  156 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----------CCCCch
Confidence            99999986321                    1    133444443  5689999999887532           112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHH-HHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.++++........... ....................+.+++|+|+++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            5 88988887653       3589999999999998753210000000 0000000000000000112367899999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCe
Q 025908          200 VQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +.++..  ....|+.+++.++.
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            999865  33468899998874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.73  E-value=6e-17  Score=124.50  Aligned_cols=195  Identities=13%  Similarity=0.111  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     .+......++..+.+|++|++++.+++++      .++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999999999865421110     01111134688999999999988887753      3799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +...+++++    +  +..++|++||...+...           .+...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~  170 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PSVSL  170 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CCcch
Confidence            99999986321                    122233332    2  56799999998875321           12234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-----HHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      | .+|...+.+.+       ..+++++.++|+.++++.......     ...........++         ..+.+++|+
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dv  241 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  241 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            5 89999887653       358999999999999875211100     1111111111111         136679999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |++++.++...  ...|+++++.+|..
T Consensus       242 A~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          242 SALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCcCCCEEEECCCcc
Confidence            99999998643  34688999998853

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.73  E-value=2.7e-17  Score=127.38  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=136.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhcC--
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--   71 (246)
                      |||+|.||+++++.|+++|++|++++|+.............       ........++.++.+|++|.+++.+++++.  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985432111110000       111122457899999999999888877642  


Q ss_pred             ---CccEEEecCCCCcc------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           72 ---GFDVVYDINGREAD------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        72 ---~~d~vi~~~~~~~~------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                         ++|++||+||....                  +..++++++    .+..++|++||...+......+..+..+..+.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               79999999986421                  122344442    24468999999877643322222233222223


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhC---CC-----cccCCCCCceeeee
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP-----IPIPGSGIQVTQLG  190 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~i  190 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.+.++.......   .......   ..     ............+.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM---YRQFRPDLEAPSRADALLAFPAMQAMPTPYV  252 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHGGGGCSSSCSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch---hhhhccccccchhHHHHhhhhhhcccCCCCC
Confidence            335 89999887653       248999999999999875322111   0111000   00     00000011124578


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      +++|+|++++.++...  ...|+++++.+|..++
T Consensus       253 ~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          253 EASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            8999999999998543  4578999999986543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.73  E-value=2.6e-17  Score=125.90  Aligned_cols=185  Identities=17%  Similarity=0.160  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+....                .....+.+|+++.+++.++++.     .++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS----------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999976652                1223457899998888777653     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...+++++    +  +..++|++||...+..           ..+...|
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  166 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------GPGHALY  166 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCChHH
Confidence            9999997431                    122334432    3  5679999999776421           1223345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC------chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++....      ..............         ....+.+++|+
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedv  237 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PLGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CCCCCcCHHHH
Confidence             89999887663       358999999999998862100      00000111111111         12346789999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      |++++.++...  ...|+.+++.+|..+
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            99999999654  346899999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.73  E-value=9.5e-18  Score=128.11  Aligned_cols=196  Identities=15%  Similarity=0.127  Sum_probs=130.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|++++.+++++      .++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999865421110     01111124688899999999988888753      3799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +..++++++    .  +..++|++||...+..           ..+...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  158 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCcch
Confidence            99999986321                    122333333    2  5679999999876421           112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      | .+|...|.+.+       ..+++++.++|+.+.++...    .......+.......+         ...+.+++|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA  229 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---------LRRMGEPKELA  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---------CCCCCCHHHHH
Confidence            5 89999988764       24899999999998876210    0000000001111111         12477899999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++++.++..+  ...|+++++.+|...
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          230 AMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCccccCCCCCEEEECCCccc
Confidence            9999998643  346889999998643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.73  E-value=1.6e-16  Score=121.84  Aligned_cols=185  Identities=15%  Similarity=0.176  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+....               ...+..+.+|++|.+++.+++++.     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987652               135678899999999888887643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...++++    +.  +..++|++||...+...           .....|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----------KNAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCChhH
Confidence            9999986321                    12223333    22  56799999998876321           122345


Q ss_pred             -ccHHHHHHHHH----h--cCCceEEeecceeeCCCCC----------CchHHHHHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          130 -KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       130 -~~k~~~e~~~~----~--~~~~~~ilR~~~i~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                       .+|...+.+.+    +  .+++++.++||.+.++...          ...............+         ...+.++
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p  224 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP---------MGRIGRP  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST---------TSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC---------CCCCcCH
Confidence             89999988764    2  2799999999999876210          0000111111111111         1235679


Q ss_pred             HHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          193 KDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|+|++++.++...  ...|+++++.+|..
T Consensus       225 edvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          225 EEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            99999999998653  34689999999854

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.73  E-value=7.7e-17  Score=124.03  Aligned_cols=194  Identities=15%  Similarity=0.192  Sum_probs=131.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+.....+..        ......+..+.+|++|.+++.+++++.     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA--------NEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421111        112357889999999999988888643     7999


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +.    +.++..++  +..++|++||...+..           ..+...|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----------IADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----------CCCChhH
Confidence            9999996321                    12    22333333  4569999999877522           1223345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++...     ...............         ....+.+++|+|
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~pedvA  244 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMDRMGTAEEIA  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------cccCCcCHHHHH
Confidence             89999887653       35899999999998776200     000000111111111         122356799999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      ++++.++...  ...|+++++.+|..++
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          245 EAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            9999998653  3468999999986543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.73  E-value=8.7e-17  Score=123.18  Aligned_cols=194  Identities=13%  Similarity=0.122  Sum_probs=126.3

Q ss_pred             CCccc-cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+| .||+++++.|+++|++|++++|+..+..+...     +... ...++.++.+|++|.+++.+++++.     ++
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD-----QLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH-----HHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            79998 59999999999999999999998755321110     0000 1257999999999999988887643     78


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC---CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |++||++|....                    +..+++++    +.   +..++|++||...+.           +..+.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  171 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------AQHSQ  171 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------CCTTC
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------CCCCC
Confidence            999999996321                    12223333    21   346899999877642           11223


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.+.++..............         ........+.+++|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRL---------ASDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHH---------HhcCCcCCCCCHHHHHHH
Confidence            345 89999887763       3689999999999988742111111111111         111122346789999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.++...  ...|+++++.+|.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            99998653  3568899998874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.73  E-value=5.4e-18  Score=129.25  Aligned_cols=196  Identities=14%  Similarity=0.075  Sum_probs=122.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..               .  . +.+|+++.+++.+++++.  ++|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999999999999876521               1  1 568999999999988743  5799999


Q ss_pred             cCCCCc-c------------chHHHHHhC-----C-CCceEEEEeecceeccCCCCCCCCC-----------------CC
Q 025908           79 INGREA-D------------EVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT  122 (246)
Q Consensus        79 ~~~~~~-~------------~~~~l~~a~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----------------~~  122 (246)
                      +||... .            +...+++++     + +..++|++||...+......+..+.                 .+
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            999754 1            222333332     2 4579999999888621110000000                 11


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      ..+...| .+|...+.+.+       ..+++++.++|+.+.++.................  +..     ....+.+++|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FVP-----PMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCC-----STTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--ccc-----ccCCCCCHHH
Confidence            1122335 89999888764       3589999999999988742111000000000000  000     1123678999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +|++++.++..+  ...|+.+++.++...
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999998754  346889999988643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.73  E-value=9.9e-17  Score=122.22  Aligned_cols=196  Identities=14%  Similarity=0.135  Sum_probs=131.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++ .|+.....+..     ........++.++.+|++|.+++.+++++.     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-----EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999987 66544321100     011112357899999999999988888643     789


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                    +...++++    +.  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----------LENYTT  153 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------CCCcHH
Confidence            99999986321                    12223333    22  4569999999876422           122334


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++..... ....+........+.         ..+.+++|+|+++
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v  224 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            5 89999987764       3589999999999988642111 111222222222222         2356799999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCeee
Q 025908          200 VQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +.++...  ...|+.+++.+|...
T Consensus       225 ~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHHhCcccCCccCCEEEECCCccC
Confidence            9999754  357899999998653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.73  E-value=5.9e-18  Score=133.12  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=142.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCC--CC---CchhhhhhcCceEEEEccCCCHHHHHHhhhcC----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~---~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----   71 (246)
                      |||+|.||.++++.|+++|++|++++|+.........  ..   ...+.......+.++.+|++|.+++.+++++.    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999987211000000  00   00111122356888999999999988887642    


Q ss_pred             -CccEEEecCCCCcc--------------------chHHHHHhCC------C------CceEEEEeecceeccCCCCCCC
Q 025908           72 -GFDVVYDINGREAD--------------------EVEPILDALP------N------LEQFIYCSSAGVYLKSDLLPHC  118 (246)
Q Consensus        72 -~~d~vi~~~~~~~~--------------------~~~~l~~a~~------~------~~~~i~~Ss~~v~~~~~~~~~~  118 (246)
                       ++|++||+||....                    +...+++++.      +      ..++|++||...+...      
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------  186 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------  186 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC------
Confidence             79999999997421                    1222333321      0      1489999997765321      


Q ss_pred             CCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                           .....| .+|..++.+.+       ..|++++.++|+ +..+........ ..            ........++
T Consensus       187 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~------------~~~~~~~~~~  247 (322)
T 3qlj_A          187 -----VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM------------ATQDQDFDAM  247 (322)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------------CCTT
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh------------hccccccCCC
Confidence                 112335 89999887764       368999999999 655432111100 00            0111223456


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCeeEEeeCCeee-----------------cHHHHHHHHHHHhCCCcceeecC
Q 025908          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYV-----------------TFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~-----------------s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +++|+|++++.++...  ...|+.+++.+|...                 +..|+++.+.+.+|.+.++.++.
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~  320 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPPVPVY  320 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCCCCCB
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCCCCCC
Confidence            7999999999998643  346889999998754                 67999999999998766555443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.73  E-value=1.3e-17  Score=129.72  Aligned_cols=212  Identities=16%  Similarity=0.138  Sum_probs=136.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcC---ceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     .+......   ++.++.+|++|++++.+++++.     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999865421110     00011112   6889999999999888887632     7


Q ss_pred             ccEEEecCCCCccc----------------------hHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREADE----------------------VEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~~~~----------------------~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|++||++|.....                      ...++++    +. ...++|++||...+...          ..+
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------HSG  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------CTT
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------CCC
Confidence            99999999863211                      1223333    22 12799999998765321          012


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHH-H--HHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEE-W--FFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                      ...| .+|...+.+.+       ..|++++.++|+.+.++.....  ... .  .......-.. ..     ....+.++
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----p~~r~~~p  250 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE-CI-----PVGHCGKP  250 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-TC-----TTSSCBCH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHh-cC-----CCCCCcCH
Confidence            2335 89999887653       3689999999999988731000  000 0  0000111000 00     11246789


Q ss_pred             HHHHHHHHHHhcCC---CCCCeeEEeeCCeeecHHHHHHHHHHH
Q 025908          193 KDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAKV  233 (246)
Q Consensus       193 ~D~a~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~l~~~~~~~  233 (246)
                      +|+|++++.++..+   ...|+.+++.++..+...+.+..+.+.
T Consensus       251 edvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          251 EEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             HHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            99999999998643   456889999999776665554444443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.73  E-value=9.5e-17  Score=122.87  Aligned_cols=193  Identities=16%  Similarity=0.178  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....        .....++.++.+|++|.+++.+++++.     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA--------KKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876532110        111357899999999999988888642     7999


Q ss_pred             EEecCCCCcc--------------------------chHHHHHh----CC--------CCceEEEEeecceeccCCCCCC
Q 025908           76 VYDINGREAD--------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPH  117 (246)
Q Consensus        76 vi~~~~~~~~--------------------------~~~~l~~a----~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (246)
                      |||++|....                          +..+++++    +.        +..++|++||...+...     
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  164 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  164 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence            9999986311                          11223333    21        24689999998775321     


Q ss_pred             CCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                            .+...| .+|...+.+.+       ..+++++.++|+.+.++.... .............  +.      ...+
T Consensus       165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~--~~------~~~~  229 (265)
T 2o23_A          165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQV--PF------PSRL  229 (265)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTC--SS------SCSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcC--CC------cCCC
Confidence                  122345 88998877653       358999999999998874211 0000111111111  11      0236


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCeeEEeeCCeee
Q 025908          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~  221 (246)
                      ++++|+|++++.++..+...++.+++.++..+
T Consensus       230 ~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          230 GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            78999999999999877678899999988643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.73  E-value=1.2e-16  Score=121.30  Aligned_cols=175  Identities=10%  Similarity=0.103  Sum_probs=124.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.                 ....+.+|++|.+++.+++++.     ++|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987662                 2235678999998888887642     6899


Q ss_pred             EEecCCCCcc---------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD---------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||++|....                     +...+++++.    ...++|++||...+..           ..+...| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----------TSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----------CCCCchhH
Confidence            9999985311                     1222333332    3358999999877521           1223345 


Q ss_pred             ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 ~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|...+.+.+         ..+++++.++|+.+.++         +........         ....+++++|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP---------TNRKYMSDA---------NFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH---------HHHHHCTTS---------CGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc---------chhhhcccc---------cccccCCHHHHHHHHH
Confidence            89999988763         25799999999988765         122211111         2235678999999999


Q ss_pred             HHhcC---CCCCCeeEEeeCCeee
Q 025908          201 QVLGN---EKASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~---~~~~~~~~~~~~~~~~  221 (246)
                      .++..   ....|+.+++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99987   4457889998876543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.73  E-value=2.4e-17  Score=124.72  Aligned_cols=193  Identities=18%  Similarity=0.196  Sum_probs=127.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-ecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++ .|+..+... +.    ........++.++.+|++|++++.+++++.     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEE-VS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HH----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999995 665433211 00    011112356888999999999998888642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||+++....                    +..++++++    .  +..++|++||...+...           .+...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence            99999986421                    122233332    2  56799999997664221           11233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++++||+.++++.... ....+........+         ...+++++|+|++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  220 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVE  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHH
Confidence            5 88998877653       258999999999998863111 11112222222111         123678999999999


Q ss_pred             HHhcCC---CCCCeeEEeeCCe
Q 025908          201 QVLGNE---KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~---~~~~~~~~~~~~~  219 (246)
                      .++..+   ...|+.|++.++.
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            998443   2357899998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.72  E-value=1.6e-17  Score=127.87  Aligned_cols=194  Identities=14%  Similarity=0.096  Sum_probs=130.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....        ......+..+.+|++|++++.+++++.     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA--------TKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        112357889999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  175 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY  175 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence            9999987421                    12223333    22  4568999999776421           1223345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCC--Cccc-CCC---CCceeeeeeHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR--PIPI-PGS---GIQVTQLGHVKDL  195 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~--~~~~-~~~---~~~~~~~i~~~D~  195 (246)
                       .+|...+.+.+       ..|++++.++|+.++++.         ........  .... ...   ......+.+++|+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  246 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM---------QQTAMAMFDGALGAGGARSMIARLQGRMAAPEEM  246 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHTCC------CCHHHHHHHHHSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch---------HHHhhhcchhhHHHHhhhhhhhccccCCCCHHHH
Confidence             89999887764       368999999999998862         11110000  0000 000   0011246779999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      |++++.++...  ...|+++++.+|...+
T Consensus       247 A~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          247 AGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            99999999653  3568999999986543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.72  E-value=2.4e-17  Score=125.43  Aligned_cols=195  Identities=20%  Similarity=0.182  Sum_probs=133.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+.        ......++..+.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI--------REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986552111        0112357899999999998888777532     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||++|....                    +...+++++.    +..++|++||...+..           ..+...| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------HPGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------CTTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------CCCchHHHH
Confidence            9999987421                    1223444432    3358999999876532           1122345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-ch----HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      +|...+.+.+       ..|++++.++|+.+.++.... ..    ...+........++         ..+.+++|+|++
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~  225 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            9999887663       358999999999999875321 11    11122222222222         124568999999


Q ss_pred             HHHHhcC-CCCCCeeEEeeCCeeecH
Q 025908          199 FVQVLGN-EKASRQVFNISGEKYVTF  223 (246)
Q Consensus       199 ~~~~~~~-~~~~~~~~~~~~~~~~s~  223 (246)
                      ++.++.. ....|+.+++.+|...++
T Consensus       226 v~~L~s~~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          226 VLFLAFEATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             HHHHHHTCTTCCSCEEEESTTTTTTB
T ss_pred             HHHHcCcCcCccCCEEEECCCccccC
Confidence            9998864 344789999999876544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.72  E-value=5.9e-17  Score=122.67  Aligned_cols=193  Identities=16%  Similarity=0.206  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|+++.| +..+..+..     .+......++.++.+|++|++++.+++++.     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV-----DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999998 433311100     011111346888999999999988887642     799


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.++..+.  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN  153 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence            99999986421                    1    223333343  56899999997764221           11223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++..... ............+.         ..+++++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DENIKAEMLKLIPA---------AQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 88988877643       3689999999999988642111 01111111121111         23678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...|+.+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            998653  3468899998874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.72  E-value=8.5e-17  Score=121.89  Aligned_cols=195  Identities=16%  Similarity=0.164  Sum_probs=132.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+..+..+..     .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFE-----NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522110     111112357899999999999988887642     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +..++++++    .  +..++|++||...+...           .....|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN-----------PGQTNY  154 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCcHHH
Confidence            9999987422                    122233332    2  45699999997765321           122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++..... ............+         ...+.+++|+|++++.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-TDEQKSFIATKIP---------SGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS-CHHHHHHHHTTST---------TCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc-cHHHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence             89998877653       3689999999999988753221 1222222222111         1346789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCeee
Q 025908          202 VLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++...  ...|+.+++.+|..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            98653  346899999998643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.72  E-value=7.4e-17  Score=124.77  Aligned_cols=193  Identities=17%  Similarity=0.240  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+..+.....     ........++.++.+|++|.+++.+++++     .++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999888754421100     00111134688899999999999888753     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    +    ++.++..+.  +..++|++||...+...           .+...|
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  193 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQANY  193 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CCCchH
Confidence            9999986421                    1    222333332  56899999998764321           112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...|.+.+       ..++++++++|+.+.++.... ....+........+.         ..+++++|+|++++.
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCHHHHHHHHHH
Confidence             88998887653       258999999999998874221 112222222221111         236789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..+  ...|+.+++.+|.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            98653  2468899998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.72  E-value=1.8e-16  Score=121.42  Aligned_cols=193  Identities=19%  Similarity=0.218  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+. ......+.++.+|++|++++.+++++.     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     000 111346888999999999888877642     799


Q ss_pred             EEEecCCCCcc--------------------chHHH----HHhCC--CCceEEEEeecc-eeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l----~~a~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~  127 (246)
                      ++||++|....                    +...+    +..++  +..++|++||.. .+.           +..+..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  170 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMPNIS  170 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSSSCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CCCCCh
Confidence            99999986421                    12222    33333  567999999976 321           111223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH--HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .| .+|...+.+.+       ..+++++.++|+.+.++... ...  ...........+.         ..+.+++|+|+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~  240 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-AVFSDPEKLDYMLKRIPL---------GRTGVPEDLKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-HHHTCHHHHHHHHHTCTT---------SSCBCGGGGHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc-ccccChHHHHHHHhhCCC---------CCCcCHHHHHH
Confidence            45 89999987764       35899999999999887321 000  1111222222111         13677999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...|+.+.+.+|.
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHcCccccCCcCCeEEECCCC
Confidence            999998653  3468899998874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.72  E-value=1.9e-17  Score=127.08  Aligned_cols=198  Identities=13%  Similarity=0.168  Sum_probs=129.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.........    ........++.++.+|++|.+++.+++++.     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL----MHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHH----HHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999865433211100    001112357899999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +..+++++    +.  +..++|++||...+...           .+...|
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  175 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA-----------FGQANY  175 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----------CCcchH
Confidence            9999986421                    12223333    22  55799999997765221           122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++..... ..    ........    .......+.+++|+|++++.
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~----~~~~~~~~----~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-PQ----DVLEAKIL----PQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-ch----hHHHHHhh----hcCCcCCccCHHHHHHHHHH
Confidence             89998887653       3589999999999988742211 10    11110111    11112345679999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCeeec
Q 025908          202 VLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      ++...  ...|+.+++.+|..++
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            98754  3568999999986543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.72  E-value=9.8e-17  Score=122.47  Aligned_cols=202  Identities=16%  Similarity=0.146  Sum_probs=126.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc-cccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+..+ .....     ...... ..++.++.+|++|++++.+++++     .++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999997654 21110     001111 24688899999999998888764     279


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....                    +...++++    +.  +..++|++||...+..           ..+..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  153 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKS  153 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-----------CCCCc
Confidence            999999986421                    11223333    32  5679999999877522           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHH--HhCCCcccC-CCCCceeeeeeHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIP-GSGIQVTQLGHVKDLA  196 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~i~~~D~a  196 (246)
                      .| .+|...+.+.+       ..+++++.++|+.+.++..... ........  ......... ........+.+++|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            45 89999887764       2489999999999988742111 00000000  000000000 0000113477899999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++.++...  ...|+.+++.++.
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCc
Confidence            9999998653  3468899998875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.72  E-value=3.5e-17  Score=128.59  Aligned_cols=225  Identities=15%  Similarity=0.090  Sum_probs=131.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++.+|+..... ..+.. ..........++..+.+|++|.+++.+++++.     ++|
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~-l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD   89 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEA-IAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRID   89 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHH-HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHH-HHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999743311 10000 00111122357899999999999988888643     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||....                    +..++++++    +  +..++|++||...+...          ......
T Consensus        90 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----------~~~~~~  159 (324)
T 3u9l_A           90 VLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----------PPYLAP  159 (324)
T ss_dssp             EEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------CSSCHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------CCcchh
Confidence            99999996321                    233344443    3  66799999998764211          111233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC---C--chHHHHHHHHHhCCCcccCCCCCc-----eeeee
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---N--PVEEWFFHRLKAGRPIPIPGSGIQ-----VTQLG  190 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i  190 (246)
                      | .+|..+|.+.+       ..|+++++++||.+.++...   .  ..................+..-..     ..+..
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            5 89999987763       25899999999999865321   0  000111111111110000000000     01125


Q ss_pred             eHHHHHHHHHHHhcCCCC-CCeeEEeeCCeeec-------HHHHHHHHHHHhCCC
Q 025908          191 HVKDLARAFVQVLGNEKA-SRQVFNISGEKYVT-------FDGLARACAKVTGYC  237 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~-~~~~~~~~~~~~~s-------~~~l~~~~~~~~g~~  237 (246)
                      +++|+|++++.++..+.. ....+.++ +....       ..++.+.+.+.+|.+
T Consensus       240 ~p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             CTHHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CHHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChH
Confidence            689999999999987642 23344444 32233       344445555556654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.72  E-value=3.1e-17  Score=123.28  Aligned_cols=165  Identities=16%  Similarity=0.105  Sum_probs=111.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....         ....++..+.+|++|.+++.+++++.     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA---------AELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---------HHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110         00136888999999999888877642     7899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    +    ++.+++.+.  +..++|++||...+..           ..+...|
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  150 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAY  150 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchh
Confidence            9999986321                    1    123444443  5789999999876522           1223345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++++||+.+.++...         .. . ..          ..+++.+|+|++++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---------~~-~-~~----------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG---------NT-P-GQ----------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc---------cc-c-cc----------cCCCCHHHHHHHHHH
Confidence             88998877653       36899999999988765210         00 0 00          115789999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++..+
T Consensus       210 l~~~~  214 (234)
T 2ehd_A          210 ALEMP  214 (234)
T ss_dssp             HHHSC
T ss_pred             HhCCC
Confidence            99764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.72  E-value=1.8e-16  Score=122.30  Aligned_cols=206  Identities=15%  Similarity=0.080  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCC-CCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhcC-
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~-~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-   71 (246)
                      |||+|.||+++++.|+++|++|++++|+........ .....       .........+..+.+|++|.+++.+++++. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            799999999999999999999999998643211000 00000       011122357889999999999988887642 


Q ss_pred             ----CccEEEecCCCCcc--------------------chHHHHHhC----C--C-CceEEEEeecceeccCCCCCCCCC
Q 025908           72 ----GFDVVYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        72 ----~~d~vi~~~~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                          ++|++||+||....                    +...+++++    .  + ..++|++||...+..         
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  171 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---------  171 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC---------
Confidence                79999999997421                    122233332    2  2 568999999776422         


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh-CCCcccCCCCCceeeeee
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  191 (246)
                        ......| .+|...+.+.+       ..|++++.++|+.++++..........+..... ...+.. . ...+..+.+
T Consensus       172 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~r~~~  247 (280)
T 3pgx_A          172 --TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-M-PVQPNGFMT  247 (280)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-B-TTBCSSCBC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-c-ccCCCCCCC
Confidence              1122345 89999887653       368999999999999985322111111111000 001111 1 112224889


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++|+|++++.++...  ...|+++++.+|.
T Consensus       248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999998653  3468899999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.72  E-value=1.9e-17  Score=126.22  Aligned_cols=197  Identities=15%  Similarity=0.162  Sum_probs=131.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     .......++.++.+|++|++++.+++++.     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKL-----EIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321110     00111357889999999999988887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----C-C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----L-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +...++++    + +  +..++|++||...+...           .....
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  155 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------PGVIH  155 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------CCcHH
Confidence            9999985321                    12223333    2 2  35789999997764221           12233


Q ss_pred             c-ccHHHHHHHHH--------hcCCceEEeecceeeCCCCCCch-H-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV-E-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~--------~~~~~~~ilR~~~i~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+.+        ..|++++.++|+.+.++...... . ..+........+         ...+.+++|+|+
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~  226 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP---------LGRLGTPEEIAG  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST---------TCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            5 88988876642        35899999999999987532110 0 001111111111         124678999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      +++.++...  ...|+.+++.+|..++
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECCCcccC
Confidence            999999653  3478999999987543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.72  E-value=4.7e-17  Score=124.31  Aligned_cols=199  Identities=13%  Similarity=0.092  Sum_probs=131.1

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     .+.......+.++.+|++|++++.+++++.     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6998  999999999999999999999997631 1110     001111134788999999999888887642     78


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC-C---CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +...+++++. .   ..++|++||...+..           ..+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  156 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------CCC
Confidence            999999986421                        1233445543 2   358999999776421           112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.++++.... ..............++         ..+.+++|+|
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva  227 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVG  227 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2235 89999887763       248999999999999874211 1112222222222222         1255799999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeecHHH
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~  225 (246)
                      ++++.++...  ...|+.+++.++..++..+
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            9999998643  3368899999987655333

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.72  E-value=9.7e-18  Score=129.16  Aligned_cols=193  Identities=20%  Similarity=0.257  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|++++.+++++.     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     011111346888999999999888877632     6999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh------CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |||++|....                    +..+++++      +.  +..++|++||...+..           ..+..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  171 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  171 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CCCCc
Confidence            9999986321                    12223333      22  3579999999776421           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-----------HHHHHHHHhCCCcccCCCCCceee
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVTQ  188 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                      .| .+|...+.+.+       ..++++++++|+.+.++.... ..           ...........         ....
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r  241 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITARV---------PIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHS---------TTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhcC---------CCCC
Confidence            35 89998887664       247999999999998862100 00           00001111111         1124


Q ss_pred             eeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++++|+|++++.++..+  ...|+++++.+|.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            778999999999998654  3468899998874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.71  E-value=6.4e-17  Score=123.20  Aligned_cols=199  Identities=18%  Similarity=0.181  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ........++.++.+|++|.+++.+++++.     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     011111246888999999999888887632     7999


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +.    +.++..+.  + ..++|++||...+..           ......
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  151 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  151 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------CCCchh
Confidence            9999986321                    11    22233332  3 579999998765421           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh-----CCC-cccCCCCCceeeeeeHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D  194 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++.     ..........     ... ............+.+++|
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  226 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch-----hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHH
Confidence            5 89998887663       358999999999998762     1111100000     000 000000001123678999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|++++.++..+  ...|+.+.+.+|..
T Consensus       227 vA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          227 VAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            999999998653  34688999988753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.71  E-value=6.8e-17  Score=123.42  Aligned_cols=198  Identities=17%  Similarity=0.106  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..        ......+..+.+|++|.+++.+++++.     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA--------GEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111        112357899999999999888887643     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHh----CC------CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------EVEPILDA----LP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a----~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +||++|....                     +...++++    +.      ...++|++||...+..           ..
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----------RP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----------CT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----------CC
Confidence            9999986421                     11222222    21      1346999998776421           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ....| .+|...+.+.+       ..+++++.++|+.+.++.....     .... ................+++++|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF-----MGED-SEEIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh-----cccC-cHHHHHHHhhcCCcCCCcCHHHHH
Confidence            22335 89998887753       3689999999999888742111     0000 000000011111223578899999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCeeecH
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      ++++.++...  ...|+++++.+|..++-
T Consensus       230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          230 EAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            9999998543  35789999999876543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.71  E-value=5.1e-17  Score=124.29  Aligned_cols=195  Identities=17%  Similarity=0.191  Sum_probs=130.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     ........++.++.+|++|++++.+++++.     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999765422111     111112357899999999999988887642     7999


Q ss_pred             EEecCCCC-cc--------------------chHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGRE-AD--------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++.. ..                    +...+++++.     +..++|++||...+..           ..+...|
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  160 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-----------QAKYGAY  160 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-----------CCccHHH
Confidence            99999763 11                    1223444432     2359999999876422           1122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch----------HHHHHHHHHhCCCcccCCCCCceeeeee
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                       .+|...+.+.+       ..+++++.++|+.++++......          ...+........         ....+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  231 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS---------DLKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------SSSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---------CcccCCC
Confidence             89998887653       36899999999999886310000          011111111111         1234678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++|+|++++.++...  ...|+++++.+|..
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999998653  35789999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.71  E-value=4.5e-17  Score=125.06  Aligned_cols=194  Identities=19%  Similarity=0.214  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+.....+.+.    ........++.++.+|+++.+++.+++++.     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999996544221111    111122357899999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHH----HHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...    ++..++  +..++|++||...+..           ..+...|
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  179 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------NMGQTNY  179 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------CCCchHh
Confidence            9999997422                    1122    223333  5579999999776422           1122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++....     +...... ..    ........+.+++|+|++++.
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~-~~----~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKA-DY----VKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------C----GGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHH-HH----HhcCCcCCCcCHHHHHHHHHH
Confidence             89999887663       368999999999998763211     1000000 00    011112346789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++..+  ...|+++++.+|.
T Consensus       250 l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCcCCEEEeCCCe
Confidence            99653  3478999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.71  E-value=7.4e-17  Score=122.87  Aligned_cols=196  Identities=17%  Similarity=0.233  Sum_probs=129.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++++..........    .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWL----EDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHH----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999998854333111100    111122357889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  163 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTNY  163 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-----------CSCCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-----------CCCCccc
Confidence            9999986421                    1    222233333  5579999999776422           1123345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............+.         ..+.+++|+|++++.
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       368999999999988763111 112222222222222         235579999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCeee
Q 025908          202 VLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      ++..  ....|+.+++.+|..+
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            9854  3356889999988643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.71  E-value=7.2e-17  Score=123.47  Aligned_cols=190  Identities=17%  Similarity=0.229  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.|+..+..+.        .......+.++.+|++|.+++.+++++     .++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976552211        112235789999999999988888764     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-----------NPGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-----------CCCchhH
Confidence            9999997421                    1    223333333  5679999999776421           1122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............++         ..+.+++|+|++++.
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~  243 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998877653       358999999999998763111 111122222222222         235668999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++...  ...|+++++.+|.
T Consensus       244 L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCccccCccCCEEEECCCe
Confidence            98653  3468899999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.71  E-value=5.9e-17  Score=124.92  Aligned_cols=196  Identities=16%  Similarity=0.226  Sum_probs=120.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.....+...    .+.......+.++.+|++|++++.+++++.     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI----AELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH----HHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999975433111110    111122357899999999998888777642     7999


Q ss_pred             EEecCCCC--cc--------------------chHHHHHh----CC--C---CceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           76 VYDINGRE--AD--------------------EVEPILDA----LP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        76 vi~~~~~~--~~--------------------~~~~l~~a----~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +||+||..  ..                    +...++++    +.  +   ..++|++||...+..           ..
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~  179 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-----------SP  179 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-----------CC
Confidence            99999872  10                    12222222    22  2   458999999776421           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      +...| .+|...+.+.+       ..+++++.++|+.+.++..... ..........        .......+.+++|+|
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~--------~~~p~~r~~~pedvA  250 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIES--------GLVPMRRWGEPEDIG  250 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc-chhHHHHHhh--------cCCCcCCcCCHHHHH
Confidence            12235 89999887653       3689999999999988742110 0000000000        011123466799999


Q ss_pred             HHHHHHhcCCC--CCCeeEEeeCCee
Q 025908          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (246)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~  220 (246)
                      ++++.++....  ..|+++++.+|..
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          251 NIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             HHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999997543  4689999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.71  E-value=1.3e-16  Score=120.85  Aligned_cols=183  Identities=19%  Similarity=0.254  Sum_probs=122.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.                ..+..+.+|++|++++.+++++     .++|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986552                1222378999999988887764     26899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++++    ++  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANY  153 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCChhH
Confidence            9999986421                    12223333    22  56799999997654211           112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............  +       ...+.+++|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~--p-------~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI--P-------AKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGC--T-------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhcC--C-------CCCCcCHHHHHHHHHH
Confidence             88998887653       358999999999987652100 0011111111111  1       1236789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++..+  ...|+.+++.++..
T Consensus       224 l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          224 LASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HcCccccCCcCCEEEECCCcc
Confidence            98643  34688999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.71  E-value=3.3e-16  Score=120.20  Aligned_cols=196  Identities=16%  Similarity=0.129  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.....+.+.    ........++.++.+|++|.+++.+++++.     ++|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV----SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998876543211110    111122367899999999999988888643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||++|....                    +...++++    +....++|++||....          ..+..+...| .
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~a  169 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKHSLYSG  169 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCCchhHH
Confidence            9999997421                    12223333    3334589999986531          0112223345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCC-----------CchHHHHHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                      +|...+.+.+       ..+++++.++|+.+.++...           ...............++         ..+.++
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p  240 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL---------HRNGWP  240 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT---------CSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC---------CCCCCH
Confidence            9999887753       36899999999999887411           00011111111111111         235569


Q ss_pred             HHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          193 KDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +|+|++++.++...  ...|+.+++.+|.
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            99999999998643  3568899998874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.71  E-value=1.4e-16  Score=122.13  Aligned_cols=193  Identities=16%  Similarity=0.154  Sum_probs=130.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.++.........    ........++.++.+|++|.+++.+++++.     ++|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETL----NAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999887765432111100    111112367899999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC------C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +..++++++      + +..++|++||...+...           .+...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  176 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----------RGQVN  176 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------CCCch
Confidence            9999986421                    123344432      2 56799999997765321           12233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++.....  ...........+.         ..+.+++|+|++++
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~  245 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLAS  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 88987776553       3589999999999998753222  2233333333222         23567999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...|+++++.+|.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          246 YLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCcccCccCCEEEeCCCc
Confidence            998653  3578899998873

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.71  E-value=3.4e-17  Score=124.78  Aligned_cols=191  Identities=17%  Similarity=0.206  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC----CccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (246)
                      |||+|.||+++++.|+++|++|++++|+.....+.+           ...+.++.+|++|.+++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----------GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----------CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----------CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999654422222           357899999999999888877532    79999


Q ss_pred             EecCCCCcc------------------------chHHHHHh----CC----------CCceEEEEeecceeccCCCCCCC
Q 025908           77 YDINGREAD------------------------EVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHC  118 (246)
Q Consensus        77 i~~~~~~~~------------------------~~~~l~~a----~~----------~~~~~i~~Ss~~v~~~~~~~~~~  118 (246)
                      ||++|....                        +...++++    +.          +..++|++||...+..       
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  156 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-------  156 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-------
Confidence            999985310                        11122222    11          2347999999776421       


Q ss_pred             CCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                          ..+...| .+|...+.+.+       ..+++++.++|+.+..+.... .............+.  .      ..+.
T Consensus       157 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~r~~  223 (257)
T 3tl3_A          157 ----QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P------SRLG  223 (257)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S------CSCB
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C------CCcc
Confidence                1122235 89998887653       368999999999998874321 112222222222211  0      2366


Q ss_pred             eHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +++|+|++++.++.++...|+++++.+|..++
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            79999999999998877789999999987554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.71  E-value=1.3e-16  Score=122.57  Aligned_cols=196  Identities=17%  Similarity=0.189  Sum_probs=122.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|+++.++.....+.+.    ........++.++.+|++|.+++.+++++.     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV----AAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999887444332111110    111112357899999999999888887643     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHh----CC-----CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------EVEPILDA----LP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a----~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |||+||....                     +...++++    +.     +..++|++||...+....          ..
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  177 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----------TQ  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT----------TT
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC----------CC
Confidence            9999986421                     11122222    22     245899999977653211          11


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+.++..................         ....+.+++|+|+
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~  248 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVAD  248 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHH
Confidence            2234 89999887653       34899999999999987432211111111111111         1223567999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...|+++++.+|.
T Consensus       249 ~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          249 AILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCCccccccCCEEeecCCC
Confidence            999998643  3468899998873

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.71  E-value=2.3e-16  Score=119.28  Aligned_cols=186  Identities=15%  Similarity=0.107  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---   70 (246)
                      |||+|+||+++++.|+++|+       +|+++.|+..+.....     .+......++.++.+|++|++++.+++++   
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       9999999764421100     00111134688999999999988888763   


Q ss_pred             --CCccEEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           71 --KGFDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                        .++|+|||++|....                    +..++++++    .  +..++|++||...+..           
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  151 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----------  151 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----------
Confidence              269999999986321                    122333332    2  5689999999887532           


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      ..+...| .+|...|.+.+       ..+++++++||+.++++.....            ..     ..  ...+++++|
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~-----~~--~~~~~~~~d  212 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV------------DD-----EM--QALMMMPED  212 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC------------CS-----TT--GGGSBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc------------cc-----cc--cccCCCHHH
Confidence            1123345 89999887653       3589999999999999842110            00     00  135788999


Q ss_pred             HHHHHHHHhcCCC--CCCeeEEeeCCeee
Q 025908          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (246)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (246)
                      +|++++.++..+.  ..++++...+++.+
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHHHhCCccccchheEEecccccc
Confidence            9999999997643  24556666555443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.71  E-value=6e-16  Score=119.16  Aligned_cols=193  Identities=14%  Similarity=0.147  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhh-cCceEEEEccCCCH----HHHHHhhhcC---
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~----~~~~~~~~~~---   71 (246)
                      |||+|+||+++++.|+++|++|++++| +..+..+..     ...... ..++.++.+|++|.    +++.+++++.   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            799999999999999999999999999 543321100     001111 24688999999999    8888777532   


Q ss_pred             --CccEEEecCCCCc--------------------cc-----------hHHHHHh----CC-CC------ceEEEEeecc
Q 025908           72 --GFDVVYDINGREA--------------------DE-----------VEPILDA----LP-NL------EQFIYCSSAG  107 (246)
Q Consensus        72 --~~d~vi~~~~~~~--------------------~~-----------~~~l~~a----~~-~~------~~~i~~Ss~~  107 (246)
                        ++|++||+||...                    ..           ...++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              7999999998632                    10           1122332    22 33      7999999987


Q ss_pred             eeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCccc
Q 025908          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (246)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                      .+..           ..+...| .+|...+.+.+       ..|++++.++|+.++++ .  ..............+.  
T Consensus       172 ~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~p~--  235 (276)
T 1mxh_A          172 TDLP-----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKVPL--  235 (276)
T ss_dssp             GGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTCTT--
T ss_pred             hcCC-----------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcCCC--
Confidence            7532           1122345 89999887653       34899999999999998 2  1122222222222111  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          180 PGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                       +     +.+.+++|+|++++.++..+  ...|+.+++.++..
T Consensus       236 -~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 -G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             -T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence             1     12678999999999998653  33688999988753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.71  E-value=2.4e-16  Score=119.37  Aligned_cols=190  Identities=16%  Similarity=0.183  Sum_probs=130.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+..+.        ..........+.+|++|++++.+++++.     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAI--------SDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986552111        0112345788999999999988888642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...++++    +.  +..++|++||...+...           .+...|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            9999996421                    12223333    22  55799999997764221           122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+..+..... ............+.         ..+.+++|+|++++.
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~  225 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVPA---------GRLGDPREIASAVAF  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       3589999999999988743221 11222222222221         235679999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCe
Q 025908          202 VLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++...  ...|+++++.+|.
T Consensus       226 L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          226 LASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HcCCccCCccCcEEEECCCe
Confidence            98643  3468999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=2.4e-16  Score=119.22  Aligned_cols=188  Identities=18%  Similarity=0.188  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...          ..++.++.+|++|++++.+++++     .++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211110          11478899999999998888764     26999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..+.  +..++|++||...++.            .....|
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~~~Y  148 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------LGQANY  148 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC------------CCchhH
Confidence            9999986421                    1    122233333  5679999999773221            112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............+.         ..+.+++|+|++++.
T Consensus       149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~  218 (245)
T 1uls_A          149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLEVAYAALF  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHH
Confidence             88888876653       358999999999998874221 111122222222111         126789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++..+  ...|+.+.+.++..
T Consensus       219 l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          219 LLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCchhcCCcCCEEEECCCcc
Confidence            98653  34688999988753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.71  E-value=1.1e-16  Score=122.35  Aligned_cols=177  Identities=17%  Similarity=0.162  Sum_probs=121.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+... +.          ..++..+.+|++|.+++.+++++.     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-LN----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-TC----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-hh----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998665322 22          247889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHH----HHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...    ++..+.  +..++|++||...+..           ..+...|
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  159 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------FPDHAAY  159 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------CCCCchH
Confidence            9999996421                    1222    333333  5679999999877522           1122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++||.+.++................. ..+       ...+++++|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~  231 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHH
Confidence             89998887653       3689999999999988742111111111111100 001       1236779999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++.++.
T Consensus       232 l~~~~~  237 (266)
T 3p19_A          232 AYQQPQ  237 (266)
T ss_dssp             HHHSCT
T ss_pred             HHcCCC
Confidence            998765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.70  E-value=3.1e-16  Score=120.95  Aligned_cols=195  Identities=14%  Similarity=0.108  Sum_probs=131.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+........     ........++.++.+|++|.+++.+++++     .++|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAE-----HLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHH-----HHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865521110     01111235688999999999998888863     25999


Q ss_pred             EEecCCCCcc------c--------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD------E--------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~------~--------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |||++|....      .                    ++.+++.+.  +..++|++||...+..         .+..+..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~~~~~  185 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIPQLQA  185 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCCCCcc
Confidence            9999875321      1                    334555554  6789999999776421         0112233


Q ss_pred             cc-ccHHHHHHHHHh-------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...|.+++.       .+ +++.++|+.+.++.... ........+....+.         ..+++++|+|+++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~~  254 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQLTPL---------GREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHHSTT---------CSCBCGGGTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHhCCc---------cCCcCHHHHHHHH
Confidence            45 899999887642       46 89999999998874321 111122222111111         2367899999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCCee
Q 025908          200 VQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +.++..+  ...|+.+++.+|..
T Consensus       255 ~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          255 LYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCccCCEEEECCCee
Confidence            9999653  34688999998753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.70  E-value=1.7e-16  Score=120.55  Aligned_cols=183  Identities=15%  Similarity=0.213  Sum_probs=123.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+.                ..+..+.+|++|++++.+++++     .++|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976552                3478899999999988887763     25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++++    +.  +..++|++||...+..           ......|
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  159 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-----------SAGQANY  159 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-----------HHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCcHHH
Confidence            9999986321                    11223332    22  5679999999766421           1112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..+++++.++|+.+.++.... .............+         ...+++++|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             88998887664       357999999999987763211 00001111111111         1236789999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCee
Q 025908          202 VLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++..+  ...|+.+.+.++..
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCcCcEEEECCccc
Confidence            98653  34688999988754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.70  E-value=4.7e-16  Score=119.26  Aligned_cols=194  Identities=18%  Similarity=0.185  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.....+.+.    .........+..+.+|++|++++.+++++.     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV----SEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999776533211110    111122357889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||+||....                    +...++++    +++..++|++||.....          .+..+...| .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  182 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGISLYSA  182 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCchHHHH
Confidence            9999986421                    12223333    33456899999855421          111223345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...+.+.+       ..+++++.++|+.+.++......  ..........+.         ..+..++|+|++++.++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            9999887753       35899999999999987532110  011112222221         12456899999999998


Q ss_pred             cC--CCCCCeeEEeeCCe
Q 025908          204 GN--EKASRQVFNISGEK  219 (246)
Q Consensus       204 ~~--~~~~~~~~~~~~~~  219 (246)
                      ..  ....|+.+++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            54  34578899998874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.70  E-value=1.4e-16  Score=121.39  Aligned_cols=199  Identities=18%  Similarity=0.173  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc--cccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+..+  ..+..     ........++.++.+|++|++++.+++++.     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-----KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999997654  21100     011111346889999999999888877532     79


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      |++||++|....                    +...++++    +.  +. .++|++||...+..           ..+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  151 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----------FPIL  151 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------CTTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------CCCc
Confidence            999999986421                    11122333    32  44 79999999876421           1122


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH--hCC--C--cccCCCCCceeeeeeH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGR--P--IPIPGSGIQVTQLGHV  192 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~--~~~--~--~~~~~~~~~~~~~i~~  192 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.+.++.     .........  .+.  .  ............+.++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  226 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM-----WEQIDAELSKINGKPIGENFKEYSSSIALGRPSVP  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH-----HHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh-----hhhhhhhhccccCCchHHHHHHHHhcCCCCCccCH
Confidence            345 89999887653       358999999999987752     111110000  000  0  0000000011236789


Q ss_pred             HHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          193 KDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|+|++++.++..+  ...|+.+++.+|..
T Consensus       227 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          227 EDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             HHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            99999999998653  34688999988754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.70  E-value=4.1e-16  Score=117.89  Aligned_cols=184  Identities=13%  Similarity=0.144  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC---CccEE
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---~~d~v   76 (246)
                      |||+|.||+++++.|++ .|+.|+++.|+....               ...+..+.+|++|.+++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 789999998876521               256789999999999988887532   79999


Q ss_pred             EecCCCCcc--------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           77 YDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      ||+||....                    +...+++++.    ...++|++||...+..           ..+...| .+
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~as  143 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------KPNSFAYTLS  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------CTTBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------CCCCchhHHH
Confidence            999997321                    2334555543    2248999999877522           1122345 89


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHH-----------HHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      |...+.+.+       ..+++++.++|+.+.++.... ....           .........         ....+.+++
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~  213 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKEF---------PLNRIAQPQ  213 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTTS---------TTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhcC---------CCCCCcCHH
Confidence            999987764       468999999999998762100 0000           111111111         113467799


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |+|++++.++..+  ...|+.+++.+|..
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            9999999999653  34688999998853

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.70  E-value=8.1e-17  Score=123.46  Aligned_cols=195  Identities=16%  Similarity=0.152  Sum_probs=130.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+.....+..     .........+..+.+|++|.+++.+++++.     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-----AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110     111122356888999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...+++++    .  +..++|++||...+...           .+...|
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  177 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-----------PGQVNY  177 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCchhH
Confidence            9999986321                    122333332    2  45689999997765221           122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++.... .............+         ...+.+++|+|++++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIP---------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             89998887653       358999999999987762100 01111122222211         1236679999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCeee
Q 025908          202 VLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      ++..  ....|+++++.+|..+
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCcEEEECCCccc
Confidence            9854  3347899999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.70  E-value=1.8e-16  Score=122.02  Aligned_cols=193  Identities=15%  Similarity=0.178  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+...     +... ..++.++.+|++|++++.+++++     .++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT-----RLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----HHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999997654211100     0000 12688899999999988887764     27999


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC--CC----ceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~--~~----~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||+||....                    +.    +.++..++  +.    .++|++||...+....          ..
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~----------~~  178 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG----------EQ  178 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC----------CS
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC----------CC
Confidence            9999985321                    11    22233332  33    7999999987753211          11


Q ss_pred             C-CccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHh--CCCcccCCCCCceeeeeeHHHH
Q 025908          126 K-SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       126 ~-~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      . .|..+|...+.+.+       ..+++++.++|+.+.++.... ...........  ..+.         ..+.+++|+
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~---------~r~~~p~dv  248 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIPM---------GRWGRPEEM  248 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTSTT---------SSCCCHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCCC---------CCcCCHHHH
Confidence            2 34489999987763       358999999999998873211 01101111111  1111         236789999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      |++++.++..+  ...|+++++.+|.
T Consensus       249 A~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          249 AALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999998653  3468899998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.70  E-value=6.2e-17  Score=124.18  Aligned_cols=196  Identities=15%  Similarity=0.168  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+..+..     .+......++.++.+|++|.+++.+++++.     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999998765532111     111122357889999999999988888642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +...++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y  175 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----------RATVAPY  175 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----------CCCchhH
Confidence            9999996421                    12223332    22  4569999999776421           1122345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++...... ...+........+.         ..+.+++|+|++++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~  246 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAV  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             89998887753       36899999999999887311100 01112222222222         23556899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCeee
Q 025908          201 QVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      .++...  ...|+.+++.+|...
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCccccCCCCcEEEECCCeec
Confidence            998643  356899999998654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.70  E-value=4.2e-17  Score=125.67  Aligned_cols=199  Identities=16%  Similarity=0.150  Sum_probs=133.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     ........+.++.+|++|.+++.+++++.     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELTD-----EIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH-----HHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221110     01111357889999999999888887642     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                     +...++++    +.  +..++|++||...+..          +..+...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~  158 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAGVAP  158 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCCchh
Confidence            9999985311                     12223333    22  4569999999776411          1112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch---HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+.+       ..+++++.++||.+.++......   ............++         ..+.+++|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~  229 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CCCcCHHHHHH
Confidence            5 89999887653       35899999999999987521100   11122222222221         23667999999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCeeecH
Q 025908          198 AFVQVLGNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      +++.++...  ...|+++++.+|..++.
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHhCccccCCcCcEEEECCCccccc
Confidence            999999653  35789999999976554

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.70  E-value=3e-16  Score=120.46  Aligned_cols=195  Identities=14%  Similarity=0.121  Sum_probs=129.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|.||+++++.|+++|++|++++|.... .+..     .+.......+.++.+|++|.+++.++.+.    .++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVA-----DEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHH-----HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            7999999999999999999999999975322 1100     01111235788999999999888776432    279999


Q ss_pred             EecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           77 YDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      ||+||....                    +...+++++    .  +..++|++||...+..           ..+...| 
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~  179 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----------GRNVAAYA  179 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CSSCHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----------CCCChhHH
Confidence            999987421                    122333332    2  5678999999877522           1122345 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       ..|++++.++|+.+.++...... ............+.         ..+.+++|+|++++.
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~  250 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            89999887653       36899999999999887421000 01111222222221         235678999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCeee
Q 025908          202 VLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      ++..  ....|+.+++.+|..+
T Consensus       251 L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhcCCcCCEEEECcCccC
Confidence            9865  3457899999998654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.70  E-value=1.2e-16  Score=123.17  Aligned_cols=194  Identities=16%  Similarity=0.202  Sum_probs=129.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+.......+.++.+|++|.+++.+++++.     ++|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865532111     011111357899999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh------CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||+||....                    +...++++      +.  +..++|++||...+..           .....
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~  173 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-----------VMYAA  173 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-----------CCCCh
Confidence            9999987421                    12223332      11  4579999999876421           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC---------c-hHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---------P-VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      .| .+|...+.+.+       ..+++++.++|+.+.++....         . .............+         ...+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  244 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP---------LGRY  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT---------TSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC---------CCCC
Confidence            35 89998887653       368999999999987762100         0 01111112211111         1245


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .+++|+|++++.++...  ...|+.+++.+|.
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            67999999999998754  3578899999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.69  E-value=6.6e-17  Score=125.93  Aligned_cols=186  Identities=15%  Similarity=0.113  Sum_probs=118.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+.......+.++.+|++|.+++.+++++.     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532111     011111357899999999999988887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +..++++++    .  + ..++|++||...+..           ......
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  180 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------NAGLGT  180 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCCchH
Confidence            9999996421                    122333332    2  3 568999999876421           112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHH-----HHhCCCcccCCCCCceeeeeeHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      | .+|...+.+.+       ..|++++.++||.+..+.     .......     .....+....+.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-----VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-----HHHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-----ccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            5 89998887653       358999999999987762     1111000     0001111111222234568899999


Q ss_pred             HHHHHHHhcCCC
Q 025908          196 ARAFVQVLGNEK  207 (246)
Q Consensus       196 a~~~~~~~~~~~  207 (246)
                      |+.++.+++.+.
T Consensus       256 A~~i~~~l~~~~  267 (301)
T 3tjr_A          256 ARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC
Confidence            999999998653

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=8.8e-17  Score=125.45  Aligned_cols=196  Identities=12%  Similarity=0.166  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-----hcCceEEEEccCCCHHHHHHhhhc-----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSA-----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~-----   70 (246)
                      |||+|+||+++++.|+++|++|++++|+..+......     +...     ...++.++.+|++|.+++.+++++     
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD-----ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999998654211000     0000     135789999999999999888864     


Q ss_pred             CCccEEEecCCCCc--------------------cchHHHHHhCC------CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           71 KGFDVVYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        71 ~~~d~vi~~~~~~~--------------------~~~~~l~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      .++|+|||+||...                    .++.++++++.      +..++|++||...++            ..
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------FP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC------------CT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC------------CC
Confidence            26999999998531                    12333444421      356899999876211            11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH---HHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      ....| .+|...+.+.+       ..+++++++||+.++++.......   ..........         .....+.+++
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~  237 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IPAKRIGVPE  237 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------STTSSCBCTH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------CcccCCCCHH
Confidence            12234 78888776553       248999999999999983111100   0000000000         0112367899


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      |+|++++.++...  ...|+.+++.++..++
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            9999999998653  3468899999986543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.69  E-value=7.1e-16  Score=118.01  Aligned_cols=196  Identities=14%  Similarity=0.111  Sum_probs=129.5

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+  |+||+++++.|+++|++|++++|+. +..+.+.     +.........++.+|++|++++.+++++.     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVE-----EFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHH-----HHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHH-----HHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999  9999999999999999999999986 2111110     01111134578899999999888877642     68


Q ss_pred             cEEEecCCCCcc-------------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |++||+||....                         +...+++++.    +..++|++||...+..           ..
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  157 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----------IP  157 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----------CC
Confidence            999999986431                         1222344432    2258999999776422           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +...| .+|...+.+.+       ..+++++.++|+.++++.... .....+........++         ..+.+++|+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  228 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  228 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            22345 89999988764       248999999999999875221 1112222222222222         135679999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      |++++.++...  ...++.+++.++..++
T Consensus       229 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          229 GNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            99999998643  3367899999986543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.69  E-value=1.9e-16  Score=119.42  Aligned_cols=187  Identities=18%  Similarity=0.231  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..           ..  .++..+.+|+++ +++.+++++     .++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~--~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QS--LGAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HH--HTCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hh--hCcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865411           01  137889999998 666655532     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...++++    +.  +..++|++||...+....         ..+...|
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  144 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY  144 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence            9999986321                    11222333    33  568999999988753211         1123345


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|...+.+.+       ..+++++.+||+.+.++...... ...+........+         ...+.+++|+|++++
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             89999887653       35899999999999887311000 0111122211111         123678999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++..+  ...|+.+++.++.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            998653  3468889988874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.69  E-value=3.9e-16  Score=119.86  Aligned_cols=201  Identities=14%  Similarity=0.126  Sum_probs=132.8

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+  |.||+++++.|+++|++|++++|+... .+.+.     +.......+.++.+|++|.+++.+++++.     ++
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRIT-----EFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHH-----HHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHH-----HHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7988  999999999999999999999998432 11110     11111245889999999999988888642     78


Q ss_pred             cEEEecCCCCcc-------------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |++||+||....                         +...+++++.    +..++|++||...+..           ..
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  162 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----------IP  162 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----------CC
Confidence            999999986421                         1223444432    2458999999776422           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +...| .+|...+.+.+       ..+++++.++|+.+..+...... ...+........++         ..+.+++|+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedv  233 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQV  233 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHH
Confidence            23345 89999887653       35899999999999887532221 12233333332222         124568999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCeeecHHHHH
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLA  227 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~l~  227 (246)
                      |++++.++..  ....|+.+++.+|..++..++.
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            9999999965  3457899999999877665543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=3.6e-16  Score=118.54  Aligned_cols=180  Identities=15%  Similarity=0.078  Sum_probs=118.6

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-------
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-------   71 (246)
                      |||+|+||+++++.|+++|  ++|++++|+..+... +...       ...++.++.+|+++.+++.+++++.       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSI-------KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHTC-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHhc-------cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  999999998665321 1100       0357899999999999888888642       


Q ss_pred             CccEEEecCCCCc-c--------------------chHHHHHhCC-----C------------CceEEEEeecceeccCC
Q 025908           72 GFDVVYDINGREA-D--------------------EVEPILDALP-----N------------LEQFIYCSSAGVYLKSD  113 (246)
Q Consensus        72 ~~d~vi~~~~~~~-~--------------------~~~~l~~a~~-----~------------~~~~i~~Ss~~v~~~~~  113 (246)
                      ++|+|||++|... .                    +..++++++.     .            ..++|++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998654 1                    1223333332     1            57899999987653321


Q ss_pred             CCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCc
Q 025908          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .    ...+..+...| .+|...+.+++       ..+++++.++|+.+.++....                        
T Consensus       161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            1    11111233345 89999988763       248999999999887762100                        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCC--CCCeeEEeeC
Q 025908          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISG  217 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  217 (246)
                       ..+++.+|+|+.++.++..+.  ..+..+.+.+
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence             135679999999999997653  3455555544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.69  E-value=1.6e-15  Score=117.09  Aligned_cols=196  Identities=17%  Similarity=0.114  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ........++.++.+|++|.+++.+++++     .++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998643211100    01111235688899999999888877753     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||++|....                    +..+++++    +++..++|++||...+...          ..+...| .
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~a  180 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKHAVYSG  180 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSCHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCCcchHH
Confidence            9999986421                    12223333    3345799999997763211          1113345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc----------hHHHHHHHHHh--CCCcccCCCCCceeeeee
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKA--GRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  191 (246)
                      +|...+.+.+       ..+++++.++|+.+.++.....          ...........  ..+         ...+.+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  251 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LRRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TCSCBC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---------CCCCcC
Confidence            9999887764       3589999999999987620000          00011111111  111         123667


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++|+|++++.++...  ...|+++++.+|.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            999999999999653  3468899998874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=7.5e-17  Score=123.71  Aligned_cols=197  Identities=17%  Similarity=0.152  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....         ....++.++.+|++|.+++.+++++.     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE---------QELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110         00135788999999999988887642     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                     +..++++++    . +..++|++||...+...           .....|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------AQAVPY  154 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----------CCCccc
Confidence            9999986321                     112233332    2 34799999997653211           112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                       .+|...+.+.+       ..+++++.++|+.++++...     .......+.......++         ..+...+|+|
T Consensus       155 ~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  225 (270)
T 1yde_A          155 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVG  225 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHH
Confidence             89999887664       36899999999999886210     00000001111111111         1256799999


Q ss_pred             HHHHHHhcC-CCCCCeeEEeeCCeeecHHHH
Q 025908          197 RAFVQVLGN-EKASRQVFNISGEKYVTFDGL  226 (246)
Q Consensus       197 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~l  226 (246)
                      ++++.++.. ....|+.+.+.+|..+.+...
T Consensus       226 ~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          226 AAAVFLASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HHHHHHcccCCCcCCCEEEECCCeecccCcC
Confidence            999998864 344688999999876654433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.69  E-value=3.2e-16  Score=119.98  Aligned_cols=195  Identities=21%  Similarity=0.222  Sum_probs=125.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.++.....+.+.    .........+..+.+|++|.+++.+++++.     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA----GKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998665543221111    111122357889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||+||....                    +...++++    ++...++|++||...+...           .....| .
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  177 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----------PSYGIYAA  177 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----------TTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----------CCchHHHH
Confidence            9999987421                    12223333    2233589999997764321           112235 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...+.+.+       ..+++++.++||.+..+..................+         ...+.+++|+|++++.++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence            9999988764       258999999999988764211111111111111111         124567999999999999


Q ss_pred             cCC--CCCCeeEEeeCCe
Q 025908          204 GNE--KASRQVFNISGEK  219 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~  219 (246)
                      ...  ...|+++++.+|.
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             STTTTTCCSEEEEESSSC
T ss_pred             CccccCccCCEEEeCCCc
Confidence            653  3478899998863

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=2.2e-16  Score=121.83  Aligned_cols=198  Identities=14%  Similarity=0.125  Sum_probs=128.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcC---ceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+||+++++.|+++|++|++++|+..+..+...     .......   ++.++.+|++|++++.+++++.     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQ-----IILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999998654211100     0000012   6889999999999888877642     6


Q ss_pred             ccEEEecCCCCcc------------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD------------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        73 ~d~vi~~~~~~~~------------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                      +|++||+||....                        +...+++++    .  + .++|++||...+...          
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  155 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA----------  155 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC----------
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC----------
Confidence            9999999986321                        112233332    1  3 799999998775321          


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHH---HHHHHHHhCCCcccCCCCCceeee
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEE---WFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ..+...| .+|...+.+.+       ..+++++.++|+.+.++.....  ...   ........... ..     ....+
T Consensus       156 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----p~~~~  229 (280)
T 1xkq_A          156 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE-CI-----PIGAA  229 (280)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-TC-----TTSSC
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHc-CC-----CCCCC
Confidence            0122345 89999887663       3589999999999988731100  000   00001111100 00     11246


Q ss_pred             eeHHHHHHHHHHHhcCC---CCCCeeEEeeCCee
Q 025908          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  220 (246)
                      .+++|+|++++.++..+   ...|+.+++.++..
T Consensus       230 ~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          230 GKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            78999999999998643   35688999999854

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.69  E-value=3.5e-17  Score=126.05  Aligned_cols=198  Identities=12%  Similarity=0.141  Sum_probs=132.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+....    -......++.++.+|++|.+++.+++++.     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK----LAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986552211100    00112357899999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +..+++++    +.  +..++|++||...+...           .....|
T Consensus       109 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  177 (277)
T 4fc7_A          109 LINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ-----------ALQVHA  177 (277)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC-----------TTCHHH
T ss_pred             EEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCcHHH
Confidence            9999985321                    12233333    22  45699999997765321           112335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++.....  .............++         ..+.+++|+|+++
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v  248 (277)
T 4fc7_A          178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHSV  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHHH
Confidence             88998887653       3589999999999988621000  001122222222222         2355799999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCeeec
Q 025908          200 VQVLGN--EKASRQVFNISGEKYVT  222 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~~~s  222 (246)
                      +.++..  ....|+++++.+|..++
T Consensus       249 ~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          249 LYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHcCCccCCcCCCEEEECCCcccC
Confidence            999964  33578999999987554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.69  E-value=3.3e-15  Score=115.50  Aligned_cols=194  Identities=13%  Similarity=0.071  Sum_probs=128.3

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     .+......++.++.+|++|.+++.+++++.     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999997631 1110     011111134788999999999888887642     79


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |++||+||....                        +...+++++.     +..++|++||...+..           ..
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  169 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-----------VP  169 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----------CC
Confidence            999999986421                        1223334322     2369999999776422           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +...| .+|...+.+.+       ..+++++.++|+.++++..... ....+........++         ..+.+++|+
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  240 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDV  240 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            22335 89999887663       2589999999999999853221 112222222222221         125579999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |++++.++...  ...|+.+++.++..
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            99999998643  33678999988753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=6e-17  Score=124.93  Aligned_cols=183  Identities=17%  Similarity=0.194  Sum_probs=119.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .....  ....+.++.+|++|++++.+++++     .++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999765421110     00000  014578899999999998888763     279


Q ss_pred             cEEEecCCCCcc--------------------c----hHHHHHhCC--CC--ceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~----~~~l~~a~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |+|||++|....                    +    ++.++.+++  +.  .++|++||...+..         .+..+
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~~~  183 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  183 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCCCC
Confidence            999999986321                    1    345555554  43  79999999877521         11222


Q ss_pred             CCcc-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ...| .+|...+.+.+         ..+++++.++|+.+.++..     .    ............ ......+++++|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-----~----~~~~~~~~~~~~-~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-----F----KLHDKDPEKAAA-TYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-----H----HHTTTCHHHHHH-HHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-----h----hhcccChhHHhh-hcccccCCCHHHH
Confidence            3345 88998876653         4579999999999887620     0    000000000000 0011246789999


Q ss_pred             HHHHHHHhcCCC
Q 025908          196 ARAFVQVLGNEK  207 (246)
Q Consensus       196 a~~~~~~~~~~~  207 (246)
                      |++++.++..+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999997654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.69  E-value=6e-16  Score=119.20  Aligned_cols=207  Identities=13%  Similarity=0.093  Sum_probs=131.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccC-CCCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||+|.||+++++.|+++|++|++++|........ ......       .........+..+.+|++|.+++.+++++  
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   96 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV   96 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999854321000 000000       01112245788999999999998888864  


Q ss_pred             ---CCccEEEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCC
Q 025908           71 ---KGFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        71 ---~~~d~vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                         .++|++||+||....                    +...++++    +.  + ..++|++||...+..         
T Consensus        97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  167 (277)
T 3tsc_A           97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM---------  167 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---------
Confidence               369999999987422                    12223333    22  2 468999999876422         


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCc-ccCCCCCceeeeee
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGH  191 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  191 (246)
                        ......| .+|...+.+.+       ..+++++.++|+.+.++.................... ..... ..+..+.+
T Consensus       168 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~  244 (277)
T 3tsc_A          168 --QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP-FLPDWVAE  244 (277)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC-SSSCSCBC
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh-ccCCCCCC
Confidence              1122335 89999887764       3589999999999988742211111111111111111 11111 11224788


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++|+|++++.++...  ...|+.+++.+|.
T Consensus       245 pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          245 PEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            999999999999653  3568899999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.68  E-value=1.1e-15  Score=117.94  Aligned_cols=193  Identities=9%  Similarity=0.072  Sum_probs=130.3

Q ss_pred             CCcccc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+  ||.++++.|+++|++|++++|+...  +.+     .+......++.++.+|+++.+++.+++++.     ++
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DRV-----EKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HHH-----HHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HHH-----HHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799977  9999999999999999999998611  000     011111346889999999999988888642     68


Q ss_pred             cEEEecCCCCcc-------------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        74 d~vi~~~~~~~~-------------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                      |++||++|....                         +...++++    +. +..++|++||...+..           .
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----------M  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----------C
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----------C
Confidence            999999986421                         11223333    22 4569999999876421           1


Q ss_pred             CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      .+...| .+|...+.+.+       ..+++++.++|+.+.++.... ..............+.         ..+.+++|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~ped  244 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIME  244 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHH
Confidence            122345 89998887653       368999999999998874221 1112222332222222         12456899


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +|++++.++...  ...|+++++.+|..
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            999999998653  35789999999864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.68  E-value=2.3e-16  Score=119.97  Aligned_cols=188  Identities=19%  Similarity=0.126  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCH-HHHHHhhhc-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSA-----K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~-~~~~~~~~~-----~   71 (246)
                      |||+|+||+++++.|+++|++ |++++|+.....  +     .+..+.  ..++.++.+|++|+ +++.+++++     .
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA--L-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH--H-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH--H-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999996 999999764210  0     000010  24688899999997 887777753     2


Q ss_pred             CccEEEecCCCCcc------------chHHHHHh----CC-C----CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           72 GFDVVYDINGREAD------------EVEPILDA----LP-N----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        72 ~~d~vi~~~~~~~~------------~~~~l~~a----~~-~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      ++|+|||++|....            +..+++++    +. .    ..++|++||...+..           ..+...| 
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  152 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------IHQVPVYS  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTSHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----------CCCchHHH
Confidence            79999999986321            22333333    22 1    357999999887532           1122345 


Q ss_pred             ccHHHHHHHHHh-------cCCceEEeecceeeCCCCC--CchH--HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          130 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNY--NPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       130 ~~k~~~e~~~~~-------~~~~~~ilR~~~i~g~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      .+|...|.+.+.       .+++++.++|+.+.++...  ..+.  .........            ...+.+++|+|++
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~  220 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHH
Confidence            899999877642       6899999999999886210  0000  000000000            1123479999999


Q ss_pred             HHHHhcCCCCCCeeEEeeCCe
Q 025908          199 FVQVLGNEKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~  219 (246)
                      ++.++... ..+++|++.++.
T Consensus       221 i~~~~~~~-~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHHcC-CCCCEEEEeCCc
Confidence            99988743 468899999984

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=4.8e-16  Score=116.95  Aligned_cols=175  Identities=12%  Similarity=0.109  Sum_probs=120.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.               .....++.+|++|.+++.+++++       .++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCcccc---------------ccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999999999987652               12356778999999888877753       379


Q ss_pred             cEEEecCCCCc------c---------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           74 DVVYDINGREA------D---------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        74 d~vi~~~~~~~------~---------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |+|||++|...      .               +...+++++    ++..++|++||...+..           ..+...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  142 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence            99999998532      1               111223332    22358999999877521           122334


Q ss_pred             c-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|...+.+.+         ..+++++.++|+.+.++.         ........         ....+++++|+|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTPLSFISEH  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cccccCCHHHHHHH
Confidence            5 89999887663         235999999999987761         11111111         11235678999999


Q ss_pred             HHHHhcC---CCCCCeeEEeeCCe
Q 025908          199 FVQVLGN---EKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~---~~~~~~~~~~~~~~  219 (246)
                      ++.++..   ....|+.+.+.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            9977733   23457888887754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.68  E-value=5.8e-17  Score=125.84  Aligned_cols=198  Identities=22%  Similarity=0.256  Sum_probs=130.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc-ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|.||+++++.|+++|++|+++.|+.... .+.+.    ........++.++.+|++|.+++.+++++     .++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVK----ALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHH----HHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHH----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999998874321 11000    01111235788999999999888877753     2799


Q ss_pred             EEEecCCCCcc---------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDINGREAD---------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      ++||++|....                     +...+++++    .+..++|++||...+...           .....|
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  199 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS-----------PHLLDY  199 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------TTCHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------CCchHH
Confidence            99999986321                     122344443    233589999998875321           122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++.....        ..................+.+++|+|++++.
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT--------TSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc--------CCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             89999887753       3589999999999988620000        0000001111111222346779999999999


Q ss_pred             HhcCC--CCCCeeEEeeCCeee
Q 025908          202 VLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      ++...  ...|+++++.+|..+
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            98643  346899999998654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.68  E-value=3.2e-16  Score=119.98  Aligned_cols=196  Identities=15%  Similarity=0.165  Sum_probs=130.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     .+..+ ....+.++.+|++|.+++.+++++.     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999765532111     01111 2357899999999988887777542     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhC----C--C-CceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      ++||+||....                    +...+++++    .  + ..++|++||...+..           ..+..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  169 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----------LPDHY  169 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----------CCCCh
Confidence            99999986421                    122233332    2  2 458999999877521           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      .| .+|...+.+.+       ..+++++.++|+.+.++...... ............++         ..+.+++|+|++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~  240 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            35 89998887653       35899999999999876210000 01111122222211         235679999999


Q ss_pred             HHHHhcC--CCCCCeeEEeeCCeee
Q 025908          199 FVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       199 ~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      ++.++..  ....|+++++.+|..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            9999865  3457899999998643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.68  E-value=2.8e-16  Score=119.10  Aligned_cols=183  Identities=13%  Similarity=0.152  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|+||+++++.|+++|++|++++|+.... +           +. ..+.++ +|+  .+++.++++.. ++|++||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~-----------~~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEELL-K-----------RS-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-H-----------HT-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-H-----------hh-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            79999999999999999999999999976221 1           11 246666 998  33344444332 89999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ||.....                        ++.++..+.  +..++|++||...+...           .+...| .+|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  157 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSAR  157 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCCchHHHHH
Confidence            9864221                        223444443  56899999998876321           122334 889


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHH-HHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      ...+.+.+       ..+++++.++|+.++++.... ....... ......+         ...+.+++|+|++++.++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcC
Confidence            88887653       368999999999999874110 0001111 1111111         1246789999999999986


Q ss_pred             CC--CCCCeeEEeeCCee
Q 025908          205 NE--KASRQVFNISGEKY  220 (246)
Q Consensus       205 ~~--~~~~~~~~~~~~~~  220 (246)
                      .+  ...|+.+++.++..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            53  34588999998753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.68  E-value=6e-16  Score=118.99  Aligned_cols=194  Identities=18%  Similarity=0.165  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+........     .+......++.++.+|++|.+++.+++++.     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-----DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765532111     111122357889999999999988888643     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +...++++    +.  + ..++|++||...+...         ...+...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~  183 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH  183 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence            9999987422                    12223333    22  2 3689999987764211         1112233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++|+.+..+....  ............++         ..+.+++|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--~~~~~~~~~~~~p~---------~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP--LADYHALWEPKIPL---------GRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG--GGGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--chHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 89999887763       368999999999998874221  11111222222111         23567899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe
Q 025908          201 QVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++...  ...|+++++.+|.
T Consensus       253 fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHcCccccCccCcEEEECcCc
Confidence            998643  3478899998875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=2.2e-16  Score=120.63  Aligned_cols=191  Identities=18%  Similarity=0.250  Sum_probs=129.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...        ....++.++.+|++|.+++.+++++.     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--------ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999998654221111        01246888999999999888887642     6899


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||++|....                    +...++++    ++...++|++||...++.            .+...| .
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~Y~a  151 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA  151 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------CCcHHHHH
Confidence            9999986321                    12223333    222469999999877511            012234 7


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...+.+.+       ..|++++.++|+.+.++.... .............+.         ..+.+++|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            8887776653       358999999999998874221 112222222222211         13677999999999998


Q ss_pred             cCC--CCCCeeEEeeCCeee
Q 025908          204 GNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~~~  221 (246)
                      ..+  ...|+.+++.++..+
T Consensus       222 s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            653  346889999998653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.67  E-value=3.1e-15  Score=117.26  Aligned_cols=206  Identities=12%  Similarity=0.111  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCch-------hhhhhcCceEEEEccCCCHHHHHHhhhcC--
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--   71 (246)
                      |||+|.||+++++.|+++|++|++++|+..............       ........+.++.+|++|++++.+++++.  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999988743311111100000       11122457889999999999988887642  


Q ss_pred             ---CccEEEecCCCCcc--------------------chHHHHHh----CC---CCceEEEEeecceeccCCCCCCCCCC
Q 025908           72 ---GFDVVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        72 ---~~d~vi~~~~~~~~--------------------~~~~l~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                         ++|++||+||....                    +...++++    +.   ...++|++||...+..          
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~----------  201 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG----------  201 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC----------
Confidence               79999999986421                    12223333    22   2467999999876522          


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhC---CC----cc-cCCCCCc
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP----IP-IPGSGIQ  185 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~---~~----~~-~~~~~~~  185 (246)
                       ......| .+|...+.+.+       ..|++++.++|+.+.++.....   .........   ..    .. .......
T Consensus       202 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          202 -APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccC
Confidence             1122345 89999887653       3589999999999988631100   011111000   00    00 0000111


Q ss_pred             eeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +..+++++|+|++++.++...  ...|+++++.+|..
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            246788999999999998543  35789999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.67  E-value=2.7e-16  Score=120.44  Aligned_cols=201  Identities=13%  Similarity=0.118  Sum_probs=131.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcC-CccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi   77 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     +....  ...+..+.+|+++.+.+.+++++. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETIK-----EIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999999999999998655221110     00111  245778999999999999888754 699999


Q ss_pred             ecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        78 ~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |++|....                    +    ++.++..+.  +..++|++||...+..           ..+...| .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  159 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-----------SQEMAHYSA  159 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-----------CTTCHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-----------CCcchHHHH
Confidence            99986421                    1    222333332  5579999999877521           1223345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcc----------cCCCCCceeeeeeHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP----------IPGSGIQVTQLGHVK  193 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~  193 (246)
                      +|...+.+.+       ..+++++.++|+.+.++.     ...++..........          ...+......+.+++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            9999987764       247899999999887752     111111100000000          000000123477899


Q ss_pred             HHHHHHHHHhcC--CCCCCeeEEeeCCeeec
Q 025908          194 DLARAFVQVLGN--EKASRQVFNISGEKYVT  222 (246)
Q Consensus       194 D~a~~~~~~~~~--~~~~~~~~~~~~~~~~s  222 (246)
                      |+|++++.++..  ....|+++++.+|...+
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999864  34578999999986544

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.67  E-value=1.7e-16  Score=121.09  Aligned_cols=200  Identities=16%  Similarity=0.109  Sum_probs=124.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.++.........    .........+.++.+|++|.+++.+++++.     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAV----AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH----HHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999998665443211100    111112357889999999999988888642     7999


Q ss_pred             EEecCCCC-cc--------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGRE-AD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||.. ..                    +...+++++.    +..++|++||...+..          +..+...| 
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~  159 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGALAYA  159 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTCHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCcHHHH
Confidence            99999853 11                    1233444432    2348999999876511          11122335 


Q ss_pred             ccHHHHHHHHH----h--cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 ~~k~~~e~~~~----~--~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|...+.+.+    +  ..++++.+.|+.+..+..............         ........+.+++|+|++++.++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence            89999887764    2  238999999999887632111000011110         11112234667999999999998


Q ss_pred             cCC--CCCCeeEEeeCCeeecH
Q 025908          204 GNE--KASRQVFNISGEKYVTF  223 (246)
Q Consensus       204 ~~~--~~~~~~~~~~~~~~~s~  223 (246)
                      ...  ...|+.+++.|+.....
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC-
T ss_pred             CccccCccCCEEEECCCcCCCC
Confidence            653  34789999999865443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.67  E-value=4.3e-15  Score=115.39  Aligned_cols=196  Identities=13%  Similarity=0.086  Sum_probs=132.2

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|  .||+++++.|+++|++|++++|+.... +.+.     ........+.++.+|++|.+++.+++++.     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-KRVD-----PLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH-----HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-HHHH-----HHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            69987  999999999999999999999985431 1110     11111245788999999999988888642     79


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+||....                        +...+++++    ....++|++||...+..           ...
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-----------~~~  178 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-----------VPH  178 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CTT
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----------CCC
Confidence            999999986421                        122333432    23458999999776421           112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+.++...... ............++         ..+..++|+|
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  249 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVG  249 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2345 89999887753       35899999999999987533221 12222222222222         1245689999


Q ss_pred             HHHHHHhcC--CCCCCeeEEeeCCeeec
Q 025908          197 RAFVQVLGN--EKASRQVFNISGEKYVT  222 (246)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~~~~~~~~s  222 (246)
                      ++++.++..  ....|+++++.+|..+.
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCCccCCccCCEEEECCCcccc
Confidence            999999965  34578999999986543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.67  E-value=6.4e-16  Score=118.57  Aligned_cols=178  Identities=18%  Similarity=0.164  Sum_probs=114.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..        .....++.++.+|++|++++.+++++.     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA--------AEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        112357889999999999988888643     7999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--C--CceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +||+||....                     +    ++.++..+.  +  ..++|++||...+..           ..+.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~  174 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----------RPYS  174 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----------CTTC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----------CCCc
Confidence            9999987321                     1    122222222  2  469999999776421           1223


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.+..+....     +.    ......  ........+.+++|+|++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~----~~~~~~--~~~~~~~~~~~pedvA~~  243 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK-----MK----AGVPQA--DLSIKVEPVMDVAHVASA  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh-----hc----ccchhh--hhcccccCCCCHHHHHHH
Confidence            345 89999887753       358999999999988763111     10    000000  001112347789999999


Q ss_pred             HHHHhcCCCC
Q 025908          199 FVQVLGNEKA  208 (246)
Q Consensus       199 ~~~~~~~~~~  208 (246)
                      ++.++.++..
T Consensus       244 v~fL~s~~~~  253 (272)
T 4dyv_A          244 VVYMASLPLD  253 (272)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCCc
Confidence            9999987643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.67  E-value=1.3e-15  Score=114.86  Aligned_cols=175  Identities=10%  Similarity=0.035  Sum_probs=121.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~~~   73 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.               ......+.+|++|++++.+++++       .++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc---------------cCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999999999987552               12356788999999888887764       379


Q ss_pred             cEEEecCCCCc------c---------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           74 DVVYDINGREA------D---------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        74 d~vi~~~~~~~------~---------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |++||++|...      .               +...+++++    ++..++|++||...+..           ..+...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  146 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------CCCchH
Confidence            99999998632      1               111223332    22358999999877532           112233


Q ss_pred             c-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|...+.+.+         ..+++++.++|+.+..+         +........         ....+++++|+|++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTPLEFLVET  208 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc---------cccccCcch---------hhccCCCHHHHHHH
Confidence            5 89999887763         34699999999988665         111111111         12245778999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.++...  ...|+.+.+.+++
T Consensus       209 v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          209 FHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHhcCCCcCccceEEEEeCCC
Confidence            99998653  2357888887754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.67  E-value=7.9e-15  Score=109.35  Aligned_cols=188  Identities=15%  Similarity=0.157  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||++-||+++++.|.++|.+|.+..|+.+...+..           ..++..+.+|++|++++++++++. ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999877643222           357889999999999999998764 59999999


Q ss_pred             CCCCcc------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHH
Q 025908           80 NGREAD------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (246)
Q Consensus        80 ~~~~~~------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (246)
                      ||....                  +    .+.++..++ +.-++|++||......           ......| .+|..+
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-----------~~~~~~Y~asKaav  154 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG-----------SADRPAYSASKGAI  154 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC-----------CSSCHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC-----------CCCCHHHHHHHHHH
Confidence            997432                  1    122223333 3468999999776311           1112235 889888


Q ss_pred             HHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--
Q 025908          136 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--  205 (246)
Q Consensus       136 e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~--  205 (246)
                      ..+.+       ..||++..+.|+.+..|..... ........+.+..++.-         +-.++|+|++++.++..  
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchh
Confidence            77653       4789999999999987742111 11223333434443322         33489999999999854  


Q ss_pred             CCCCCeeEEeeCCe
Q 025908          206 EKASRQVFNISGEK  219 (246)
Q Consensus       206 ~~~~~~~~~~~~~~  219 (246)
                      ....|+.+.+.+|.
T Consensus       226 ~~iTG~~l~VDGG~  239 (242)
T 4b79_A          226 SFVTGAVLAVDGGY  239 (242)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCccCceEEECccH
Confidence            34578899998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.66  E-value=7.3e-15  Score=113.74  Aligned_cols=192  Identities=15%  Similarity=0.131  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCC-CccccCCCCCCchhhh-hhcCceEEEEccCCC----HHHHHHhhhc----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSA----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~----~~~~~~~~~~----   70 (246)
                      |||+|.||+++++.|+++|++|++++|+. .+..+..     .... .....+.++.+|++|    .+++.+++++    
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            79999999999999999999999999987 4321100     0000 113568899999999    8888877753    


Q ss_pred             -CCccEEEecCCCCc----------c-----c-------------------hHHHHHhCC--C------CceEEEEeecc
Q 025908           71 -KGFDVVYDINGREA----------D-----E-------------------VEPILDALP--N------LEQFIYCSSAG  107 (246)
Q Consensus        71 -~~~d~vi~~~~~~~----------~-----~-------------------~~~l~~a~~--~------~~~~i~~Ss~~  107 (246)
                       .++|++||+||...          .     .                   ++.++..+.  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence             27999999998631          1     0                   111223333  2      46999999977


Q ss_pred             eeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCccc
Q 025908          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (246)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                      .+..           ..+...| .+|...+.+.+       ..+++++.++|+.++++. ..  ............+.  
T Consensus       184 ~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~--~~~~~~~~~~~~p~--  247 (288)
T 2x9g_A          184 VDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM--GEEEKDKWRRKVPL--  247 (288)
T ss_dssp             TTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS--CHHHHHHHHHTCTT--
T ss_pred             ccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc--ChHHHHHHHhhCCC--
Confidence            6421           1122335 89988877653       358999999999999985 21  12122222222221  


Q ss_pred             CCCCCceeee-eeHHHHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          180 PGSGIQVTQL-GHVKDLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       180 ~~~~~~~~~~-i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                       +      .+ .+++|+|++++.++..  ....|+.+.+.+|..
T Consensus       248 -~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          248 -G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             -T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence             1      13 5789999999999964  234688899988753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.66  E-value=2.3e-16  Score=121.79  Aligned_cols=194  Identities=16%  Similarity=0.158  Sum_probs=131.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..        ......+.++.+|++|.+++.++++.    .++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA--------DELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999865532111        11235789999999999998888764    268999


Q ss_pred             Eec-CCCCcc-------------------------chHHHHHhC------------CCCceEEEEeecceeccCCCCCCC
Q 025908           77 YDI-NGREAD-------------------------EVEPILDAL------------PNLEQFIYCSSAGVYLKSDLLPHC  118 (246)
Q Consensus        77 i~~-~~~~~~-------------------------~~~~l~~a~------------~~~~~~i~~Ss~~v~~~~~~~~~~  118 (246)
                      ||+ ++....                         +..++++++            .+..++|++||...+..       
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  180 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-------  180 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-------
Confidence            999 443210                         111222221            12358999999877522       


Q ss_pred             CCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                          ......| .+|...+.+.+       ..+++++.++|+.+..+.... .............+.        ...+.
T Consensus       181 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~~~~  247 (281)
T 3ppi_A          181 ----QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--------PKRLG  247 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--------SSSCB
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--------CCCCC
Confidence                1122345 89998877653       358999999999987752111 111222222222221        02467


Q ss_pred             eHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +++|+|++++.++.++...|+++++.+|..++
T Consensus       248 ~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            89999999999998877789999999987654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.66  E-value=5.2e-15  Score=114.75  Aligned_cols=195  Identities=10%  Similarity=0.089  Sum_probs=129.3

Q ss_pred             CCcccc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+  ||+++++.|+++|++|+++.|+.... +.+     .+......++.++.+|++|.+++.+++++.     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRV-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHH-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHH-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  99999999999999999999874321 100     011111246889999999999988888642     79


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+||....                        +...++++    +++..++|++||...+..           ...
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~  179 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-----------MPN  179 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------CCc
Confidence            999999997530                        12223333    334469999999877532           112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..|++++.++|+.+.++.... ..............++         ..+.+++|+|
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  250 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVG  250 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2345 89999887653       358999999999998874221 1112222222222222         1245689999


Q ss_pred             HHHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          197 RAFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      ++++.++..  ....|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCccccCCcceEEEECCCccc
Confidence            999999865  3357899999998653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.66  E-value=5.9e-15  Score=112.96  Aligned_cols=195  Identities=8%  Similarity=0.052  Sum_probs=130.1

Q ss_pred             CCcccc--chHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|+  ||.++++.|+++|++|+++.|+.... +.+.    ...... ..++.++.+|++|.+++.+++++.     +
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  99999999999999999999875331 1100    000011 136899999999998888887642     7


Q ss_pred             ccEEEecCCCCcc------------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~d~vi~~~~~~~~------------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +|++||+++....                        +...+++++    ++..++|++||...+..           ..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  156 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----------MP  156 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CT
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----------CC
Confidence            9999999986430                        122234443    23468999999776421           11


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|...+.+.+       ..+++++.++|+.+.++..... .............+.         ..+.+++|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dv  227 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEV  227 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            22335 89998887653       3589999999999988642211 112223333222222         124578999


Q ss_pred             HHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          196 ARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |++++.++...  ...|+++++.+|..
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeE
Confidence            99999999753  35789999999854

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.66  E-value=1.7e-15  Score=114.94  Aligned_cols=180  Identities=15%  Similarity=0.121  Sum_probs=111.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC----CccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~v   76 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|.+++.+++++.    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            799999999999999999999999999876632111     111112357899999999999988888643    78999


Q ss_pred             EecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      ||+||....                    +...++++    +.  +..++|++||...+..           ......| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  156 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-----------GSGFAAFA  156 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-----------CTTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-----------CCCCccHH
Confidence            999996422                    12222332    33  4579999999776421           1122335 


Q ss_pred             ccHHHHHHHHH-------hcCCce-EEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~-~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      .+|...+.+.+       ..++++ +.+.||.+..+..... ......         ..... .+..+.+++|+|++++.
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-~~~~~~---------~~~~~-~~~~~~~pedvA~~~~~  225 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-REQMFG---------KDALA-NPDLLMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-chhhhh---------hhhhc-CCccCCCHHHHHHHHHH
Confidence            89998887653       357999 8999998877632110 000000         00111 11227889999999999


Q ss_pred             HhcCCC
Q 025908          202 VLGNEK  207 (246)
Q Consensus       202 ~~~~~~  207 (246)
                      ++.++.
T Consensus       226 l~s~~~  231 (252)
T 3h7a_A          226 LYQQPK  231 (252)
T ss_dssp             HHHCCG
T ss_pred             HHhCch
Confidence            998654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.65  E-value=4.5e-16  Score=116.09  Aligned_cols=176  Identities=17%  Similarity=0.150  Sum_probs=123.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||+|.||+++++.|.++|++|+++.|+..                         +|++|++++++++++. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999987532                         6999999999888753 69999999


Q ss_pred             CCCCc-c--------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHH
Q 025908           80 NGREA-D--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (246)
Q Consensus        80 ~~~~~-~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (246)
                      +|... .                    +...+++++.    +..++|++||...+..           ..+...| .+|.
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~asK~  135 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------VANTYVKAAINA  135 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------CCCchHHHHHHH
Confidence            99641 1                    1223444432    2348999999876422           1122345 8999


Q ss_pred             HHHHHHH----hc-CCceEEeecceeeCCCCCCc---hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          134 NTESVLE----SK-GVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       134 ~~e~~~~----~~-~~~~~ilR~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ..+.+.+    +. .++++.++|+.+.++.....   ....+........+.         ..+.+++|+|++++.++..
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccC
Confidence            9887764    22 39999999999988742211   111122222222222         2356799999999999987


Q ss_pred             CCCCCeeEEeeCCeee
Q 025908          206 EKASRQVFNISGEKYV  221 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~  221 (246)
                      ....|+.+++.+|..+
T Consensus       207 ~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          207 SYMTGTVIDVDGGALL  222 (223)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCcEEEecCCeec
Confidence            7778999999998654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.65  E-value=6.2e-16  Score=119.35  Aligned_cols=202  Identities=15%  Similarity=0.141  Sum_probs=131.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     +.......+.++.+|++|++++.+++++.     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVAD-----EIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998655321110     11111357889999999999888888643     7999


Q ss_pred             EEecCCCCcc---------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                     +...+++++    +  +..++|++||...+..         .+..+...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~~~~~  179 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTPGATA  179 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCSTTCHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCCCchH
Confidence            9999986311                     122333332    3  5679999999765321         01112333


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCce--eeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~  198 (246)
                      | .+|...+.+.+       ..+++++.++||.+..+.........  .. ....+..........  ..+..++|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--EE-ETAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--HH-HHSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--ch-hhhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            5 89999887764       25799999999999887532111000  00 000001111111111  245678999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCe
Q 025908          199 FVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++.++...  ...|+.+++.+|.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHcCccccCCcCCEEEECcCc
Confidence            99998643  3468899999885

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.65  E-value=3.5e-16  Score=118.46  Aligned_cols=188  Identities=14%  Similarity=0.101  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+.        ......++..+.+|++|++++.+++++.     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAA--------AASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            79999999999999999999999999986552211        1112357889999999999888887642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +...++++    +.  + ..++|++||...+...           .....
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----------PNMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----------TTCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----------CCchh
Confidence            9999996421                    12223333    33  3 5799999997765321           11234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC---chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|...+.+.+       ..+++++.++|+.+.++....   .....+....   .++         ..+.+++|+|+
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~~---------~r~~~pedva~  220 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QAM---------KGKGQPEHIAD  220 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SSS---------CSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---ccc---------CCCcCHHHHHH
Confidence            5 88988887653       368999999999987752100   0000111000   111         12456899999


Q ss_pred             HHHHHhcCC--CCCCeeEEeeCCe
Q 025908          198 AFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +++.++...  ...|+.+++.+|.
T Consensus       221 ~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          221 VVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            999998653  3478899998874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.65  E-value=1.6e-15  Score=115.82  Aligned_cols=192  Identities=19%  Similarity=0.141  Sum_probs=118.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     .+.......+..+.+|++|.+++.+++++.     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111     111112356888999999999888877642     7999


Q ss_pred             EEecCCCCcc--------------------chH----HHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~----~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +..    .++..+.  +..++|++||...+..           ......|
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  153 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----------VPTAAVY  153 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----------CCCChhH
Confidence            9999987422                    112    2223332  5579999999876422           1122335


Q ss_pred             -ccHHHHHHHHH----h-cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 -KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 -~~k~~~e~~~~----~-~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                       .+|...+.+.+    + .+++++.++||.+..+....     +.    .........  .....+.+++|+|++++.++
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-----~~----~~~~~~~~~--~~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-----IT----HEETMAAMD--TYRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc-----cc----chhHHHHHH--hhhccCCCHHHHHHHHHHHh
Confidence             89998887653    2 38999999999987763111     00    000000000  01112467999999999999


Q ss_pred             cCCCC--CCeeEEeeCCe
Q 025908          204 GNEKA--SRQVFNISGEK  219 (246)
Q Consensus       204 ~~~~~--~~~~~~~~~~~  219 (246)
                      ..+..  .+++.....++
T Consensus       223 s~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          223 EAPQSVDTTEITIRPTAS  240 (264)
T ss_dssp             HSCTTEEEEEEEEEECC-
T ss_pred             cCCccCccceEEEecCcc
Confidence            87643  23444444333

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.65  E-value=2.5e-15  Score=114.81  Aligned_cols=173  Identities=17%  Similarity=0.111  Sum_probs=114.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .........+.++.+|+++.+++.+++++     .++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532110     11111235789999999999998888764     26999


Q ss_pred             EEecCCCC-cc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |||++|.. ..                    +...++++    +.  +..++|++||...+..           ..+...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  178 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------VADGAA  178 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------CTTCHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------CCCCch
Confidence            99999872 11                    12223333    22  5679999999776421           122234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..+++++.++||.+..+...         ....         ......+++.+|+|++++
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~---------~~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV---------GLSA---------KKSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc---------cccc---------ccccccCCCHHHHHHHHH
Confidence            5 88998887653       36899999999988765210         0000         011234668999999999


Q ss_pred             HHhcCCC
Q 025908          201 QVLGNEK  207 (246)
Q Consensus       201 ~~~~~~~  207 (246)
                      .++..+.
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9997643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.65  E-value=1.5e-15  Score=117.57  Aligned_cols=206  Identities=16%  Similarity=0.149  Sum_probs=131.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCC----CCCch-------hhhhhcCceEEEEccCCCHHHHHHhhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLS   69 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~----~~~~~-------~~~~~~~~v~~~~~D~~~~~~~~~~~~   69 (246)
                      |||+|.||+++++.|+++|++|++++|+.........    .....       ........+.++.+|++|++++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            7999999999999999999999999997543211100    00000       111223578899999999999888876


Q ss_pred             c-----CCccEEEecCCCCcc---------------------chHHHHHh----CC--C-CceEEEEeecceeccCCCCC
Q 025908           70 A-----KGFDVVYDINGREAD---------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLP  116 (246)
Q Consensus        70 ~-----~~~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~  116 (246)
                      +     .++|++||++|....                     +...++++    +.  + ..++|++||...+..     
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  171 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA-----  171 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC-----
Confidence            4     279999999986321                     12223333    22  2 458999999876421     


Q ss_pred             CCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhC---CCc----c--c
Q 025908          117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPI----P--I  179 (246)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~---~~~----~--~  179 (246)
                            ......| .+|...+.+.+       ..+++++.++|+.+..+.......   .......   ...    .  .
T Consensus       172 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          172 ------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHHH
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchhhHHHHHH
Confidence                  1122335 89998887653       368999999999998875322110   0111000   000    0  0


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          180 PGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      .... .+..+.+++|+|++++.++...  ...|+.+++.+|..+
T Consensus       243 ~~~~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          243 MFHT-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TTCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhc-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            0111 1135678999999999999643  457899999998643

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.64  E-value=8.1e-15  Score=110.96  Aligned_cols=189  Identities=14%  Similarity=0.117  Sum_probs=120.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....        .....++.++.+|++|++++.+++++.     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999765421110        111246889999999999999888642     6999


Q ss_pred             EEecCCCCc--c-------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREA--D-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~--~-------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|...  .                   +...++++    +.  +..++|++||...+..           ..+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----------CCCCch
Confidence            999998642  0                   11122222    32  5679999999876421           112234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceee-CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|...+.+.+       ..+++++.++|+.+. .+...... .   ..  ........    ....+++++|+|+++
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~-~---~~--~~~~~~~~----~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF-K---GD--DGKAEKTY----QNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcc-c---Cc--hHHHHHHH----hccCCCCHHHHHHHH
Confidence            5 89999988764       258999999999998 45211000 0   00  00000000    012346899999999


Q ss_pred             HHHhcCC-CCCCeeEEeeCC
Q 025908          200 VQVLGNE-KASRQVFNISGE  218 (246)
Q Consensus       200 ~~~~~~~-~~~~~~~~~~~~  218 (246)
                      +.++..+ ...+..+.+.+.
T Consensus       217 ~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          217 WWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHSCTTCCCCEEEECCT
T ss_pred             HHHhcCCccceeeEEEEccc
Confidence            9999764 334556665543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.64  E-value=4.4e-15  Score=111.39  Aligned_cols=185  Identities=16%  Similarity=0.166  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|.+.+|+.....+...+         ..++..+.+|++|++++++++++     .++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986553221111         35788999999999888877753     37999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||.....                        ++.++..+. +..++|++||...+...           .....| 
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~-----------~~~~~Y~  147 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE-----------PDSEAYA  147 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC-----------TTCHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC-----------CCCHHHH
Confidence            99999874321                        222233333 34689999997764211           111234 


Q ss_pred             ccHHHHHHHHH------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 ~~k~~~e~~~~------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|..+..+.+      ..++++..+.||.+-.+....     +........++.         -+..++|+|++++.++
T Consensus       148 asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~Pl~---------R~g~pediA~~v~fL~  213 (247)
T 3ged_A          148 SAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIPAG---------KVGTPKDISNMVLFLC  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTS---------SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCCCC---------CCcCHHHHHHHHHHHH
Confidence            88888876543      148999999999887664211     111222222221         1345899999999999


Q ss_pred             cCCCCCCeeEEeeCCe
Q 025908          204 GNEKASRQVFNISGEK  219 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~  219 (246)
                      ......|+.+.+.||-
T Consensus       214 s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          214 QQDFITGETIIVDGGM  229 (247)
T ss_dssp             HCSSCCSCEEEESTTG
T ss_pred             hCCCCCCCeEEECcCH
Confidence            8777789999999984

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.64  E-value=2.2e-16  Score=121.26  Aligned_cols=171  Identities=15%  Similarity=0.134  Sum_probs=118.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|+||+++++.|+++|++|++++|+........     .+......++.++.+|++|.+++.+++++.     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            799999999999999999999999999865421110     011111347899999999999888877632     7999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      |||++|....                    +    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  180 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-----------VPFLLAY  180 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-----------HHHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------CCCchhH
Confidence            9999986421                    1    222333332  5679999999877532           1122235


Q ss_pred             -ccHHHHHHHHH----------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       130 -~~k~~~e~~~~----------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                       .+|...|.+++          ..+++++++||+.+.++....             . .      .....+++++|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-------------~-~------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------P-S------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------T-H------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-------------c-c------ccccCCCCHHHHHHH
Confidence             88998887663          237999999999988774211             0 0      011346789999999


Q ss_pred             HHHHhcCCC
Q 025908          199 FVQVLGNEK  207 (246)
Q Consensus       199 ~~~~~~~~~  207 (246)
                      ++.++.++.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.64  E-value=2.4e-15  Score=115.69  Aligned_cols=194  Identities=11%  Similarity=0.049  Sum_probs=127.5

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+.     +......++.++.+|++|++++.+++++.     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~-----~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVR-----PIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHH-----HHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHH-----HHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6998  999999999999999999999998641 11110     11111134788999999999888887642     68


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||++|....                        +...+++++.    +..++|++||...+..           ..+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------MAH  154 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------CCC
Confidence            999999986431                        1223344432    2358999999766421           112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+.++..... .............++         ..+.+++|+|
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva  225 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  225 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2335 89999887663       3489999999999988742111 112222222222221         1245689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++++.++...  ...|+.+++.++..
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999998642  34678898988753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.64  E-value=7.2e-15  Score=112.39  Aligned_cols=197  Identities=16%  Similarity=0.158  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-h-cCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     +... . ...+..+.+|++|.+++.+++++.     ++
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAES-----ALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998655221110     0000 1 134889999999999888877642     78


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....                    +...++++    +.  +..++|++||...+..           .....
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----------EPHMV  157 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------CTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------CCCch
Confidence            999999986422                    12223333    33  4568999999776421           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc---------hHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      .| .+|...+.+.+       ..|++++.++|+.+.++.....         ....+..........++       ..+.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-------GRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-------CSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-------CCCc
Confidence            45 89998887653       3589999999999887520000         00111111111111111       2356


Q ss_pred             eHHHHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          191 HVKDLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      +++|+|++++.++..  ....|+.+++.+|..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            799999999999864  335789999998753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.64  E-value=5.7e-15  Score=114.89  Aligned_cols=208  Identities=13%  Similarity=0.154  Sum_probs=130.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-------hhhhhhcCceEEEEccCCCHHHHHHhhhc---
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---   70 (246)
                      |||+|.||.++++.|+++|++|++++|+.......+.....       .........+.++.+|++|.+++.+++++   
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985431111110000       11122346789999999999988888764   


Q ss_pred             --CCccEEEecCCCCcc---------------------chHHHHHh----CC---CCceEEEEeecceeccCCCCCCCCC
Q 025908           71 --KGFDVVYDINGREAD---------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~---------------------~~~~l~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                        .++|++||++|....                     +...++++    +.   +..++|++||...+..         
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------  184 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---------  184 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---------
Confidence              279999999986321                     11223332    21   3568999999876421         


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcc------cCCCCCce
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQV  186 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  186 (246)
                        ......| .+|..++.+.+       ..|++++.++||.+.++..........+..........      ..... .+
T Consensus       185 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p  261 (299)
T 3t7c_A          185 --AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV-LP  261 (299)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS-SS
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc-cC
Confidence              1122335 89998887653       35899999999999987532211100000000000000      00000 01


Q ss_pred             eeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          187 TQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ..+.+++|+|++++.++...  ...|+++++.+|..
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            24678999999999999653  35689999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.64  E-value=1.3e-15  Score=117.07  Aligned_cols=193  Identities=12%  Similarity=0.107  Sum_probs=127.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~v   76 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+.......+..+.+|++|.+++.++++.    .++|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQ-----QRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHH-----HHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999876532111     11112246789999999998887777653    379999


Q ss_pred             EecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        77 i~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      ||+||....                    +...++++    +.  +..++|++||...+.           +..+...| 
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~  182 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVVTAYA  182 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCchhhH
Confidence            999996321                    12223333    22  567999999987642           11222235 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch--HHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .+|...+.+.+       ..+++++.++||.+..+......  ............ ++         ..+..++|+|+++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v  253 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence            89998887653       35899999999998776210000  001111111111 11         1245689999999


Q ss_pred             HHHhcCC--CCCCeeEEeeCC
Q 025908          200 VQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~  218 (246)
                      +.++...  ...|+++++.+|
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            9998653  347889998886

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.64  E-value=1.4e-15  Score=116.95  Aligned_cols=176  Identities=15%  Similarity=0.064  Sum_probs=118.8

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|++ .|++|++++|+..+.....     ........++.++.+|++|.+++.+++++.     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999 9999999999865421110     001111246889999999999888887642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHhCC----CCceEEEEeecceecc-CC----------CCCCCC
Q 025908           75 VVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLK-SD----------LLPHCE  119 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~-~~----------~~~~~e  119 (246)
                      +|||+||....                    +..++++++.    ...++|++||...+.. ..          ...++|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            99999986421                    1233445443    2349999999877632 00          001111


Q ss_pred             C-------------------CCCCCCCcc-ccHHHHHHHHH-------h----cCCceEEeecceeeCCCCCCchHHHHH
Q 025908          120 T-------------------DTVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (246)
Q Consensus       120 ~-------------------~~~~~~~~~-~~k~~~e~~~~-------~----~~~~~~ilR~~~i~g~~~~~~~~~~~~  168 (246)
                      +                   .+..|...| .+|...|.+++       .    .+++++.++|+.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            1                   111233455 89988887653       2    48999999999987763110       


Q ss_pred             HHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                                        ..+.+++|+|+.++.++..+
T Consensus       238 ------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------cccCChhHhhhhHhhhhcCc
Confidence                              13568999999999999754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.64  E-value=4.6e-15  Score=112.85  Aligned_cols=195  Identities=16%  Similarity=0.196  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC---------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~---------   71 (246)
                      |||+|.||+++++.|+++|++|+++.++.........    .+.......+..+.+|+++.+++..+++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            7999999999999999999999987555433111100    111122357888999999988887776531         


Q ss_pred             --CccEEEecCCCCcc--------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           72 --GFDVVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        72 --~~d~vi~~~~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                        ++|++||++|....                    +...+++++.    +..++|++||...+..           ...
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-----------CTT
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-----------CCC
Confidence              39999999987422                    1233444432    3458999999776422           112


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+..+....... ...........+.         ..+.+++|+|
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  228 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------NRLGEVEDIA  228 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------CCCCCHHHHH
Confidence            2335 89998887653       358999999999998875322111 1111222222221         2355699999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      ++++.++...  ...|+++++.+|.
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHhCcccCCccCCEEEecCCe
Confidence            9999998543  3578999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.64  E-value=5.7e-15  Score=113.10  Aligned_cols=179  Identities=17%  Similarity=0.175  Sum_probs=122.8

Q ss_pred             CCccccchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC------
Q 025908            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------   71 (246)
                      |||+|+||+++++.|+++|   ++|++++|+..+.. .+     .+......++.++.+|+++.+++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-EL-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HH-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HH-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            7999999999999999999   99999999876521 11     111111357899999999998888887632      


Q ss_pred             -CccEEEecCCCCc-c--------------------chHHHHHhCC-----C------------CceEEEEeecceeccC
Q 025908           72 -GFDVVYDINGREA-D--------------------EVEPILDALP-----N------------LEQFIYCSSAGVYLKS  112 (246)
Q Consensus        72 -~~d~vi~~~~~~~-~--------------------~~~~l~~a~~-----~------------~~~~i~~Ss~~v~~~~  112 (246)
                       ++|+|||++|... .                    +...+++++.     .            ..++|++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998643 1                    1222333321     1            4689999998775322


Q ss_pred             CCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCC
Q 025908          113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI  184 (246)
Q Consensus       113 ~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                      .        +..+...| .+|...|.+.+       ..+++++++||+.+..+....                       
T Consensus       181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            1        11123345 89999987763       258999999999987662100                       


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                        ..+++.+|+|+.++.++...  ...+..+.+.++
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence              12467899999999998643  335655555543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.63  E-value=6.8e-15  Score=112.84  Aligned_cols=191  Identities=15%  Similarity=0.100  Sum_probs=121.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+......     .... ..++.++.+|++|.+++.+++++.     ++|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG-----ELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211100     0000 136889999999999999888742     5799


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCc-eEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                     +    ++.++..+.  +.. ++|++||...+..           .....
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~  169 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSH  169 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCc
Confidence            9999986421                     1    222333333  456 9999999876421           11223


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..+++++.++|+.+.++.....     .... .........    ...+++.+|+|+++
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-----~~~~-~~~~~~~~~----~~~~~~pedvA~~v  239 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR-----FGGD-QARYDKTYA----GAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc-----cccc-hHHHHHhhc----cCCCCCHHHHHHHH
Confidence            35 89999988764       2579999999999987732110     0000 000000000    11247899999999


Q ss_pred             HHHhcCCC-CCCeeEEeeCC
Q 025908          200 VQVLGNEK-ASRQVFNISGE  218 (246)
Q Consensus       200 ~~~~~~~~-~~~~~~~~~~~  218 (246)
                      +.++..+. ..++.+.+.++
T Consensus       240 ~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          240 FWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccceEEEeec
Confidence            99997643 34556666654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.63  E-value=3e-16  Score=119.79  Aligned_cols=202  Identities=11%  Similarity=0.071  Sum_probs=123.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|....... +.. ...+......++.++.+|++|.+++.+++++.     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-ANK-LKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHH-HHH-HHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHH-HHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999886433110 000 00011111357889999999999988888642     7999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----CCCceEEEEeecceeccCCCCCCCCCCCCCCCCcccc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      +||+||....                    +...+++++    ++..++|++||...+.....          ...|..+
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~----------~~~Y~as  164 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF----------YSTYAGN  164 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----------CCC----
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----------CchhHHH
Confidence            9999996421                    122233332    23468999999876543211          1124488


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      |...+.+.+       ..+++++.++||.+..+..         ....................+.+++|+|++++.++.
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---------~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s  235 (262)
T 3ksu_A          165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF---------YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT  235 (262)
T ss_dssp             -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH---------HTCC------------CCCCSCCGGGTHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc---------cccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence            888887653       2589999999998866420         000000000000111112346678999999999987


Q ss_pred             C-CCCCCeeEEeeCCeeecH
Q 025908          205 N-EKASRQVFNISGEKYVTF  223 (246)
Q Consensus       205 ~-~~~~~~~~~~~~~~~~s~  223 (246)
                      . ....|+.+++.|+.....
T Consensus       236 ~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          236 DGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTTCCSCEEEESTTCCCC-
T ss_pred             CCCCccCCEEEECCCccCCC
Confidence            5 234689999999865443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.63  E-value=9.3e-15  Score=112.93  Aligned_cols=190  Identities=17%  Similarity=0.204  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc---hhhhhhcCceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+ +.....   ........++.++.+|++|.+++.+++++.     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPK-LPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhh-hhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999876322 111111   112223467899999999999888887643     7


Q ss_pred             ccEEEecCCCCcc--------------------chHHHHH----hCC--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        73 ~d~vi~~~~~~~~--------------------~~~~l~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +|++||+||....                    +...+++    .++  +..++|++||...+...          ..+.
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  163 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----------WLRP  163 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----------GSCS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----------CCCC
Confidence            9999999986421                    1222333    333  45699999987654211          0112


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ..| .+|...+.+.+       ..|++++.++|+.+...    .    +......... +       ...+.+++|+|++
T Consensus       164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t----~----~~~~~~~~~~-~-------~~r~~~pedvA~~  227 (285)
T 3sc4_A          164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT----A----AVQNLLGGDE-A-------MARSRKPEVYADA  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----H----HHHHHHTSCC-C-------CTTCBCTHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc----H----HHHhhccccc-c-------ccCCCCHHHHHHH
Confidence            335 89998887653       36899999999843221    1    1222212111 1       1235578999999


Q ss_pred             HHHHhcCCC-CCCeeEEeeC
Q 025908          199 FVQVLGNEK-ASRQVFNISG  217 (246)
Q Consensus       199 ~~~~~~~~~-~~~~~~~~~~  217 (246)
                      ++.++..+. ..|+.+.+.+
T Consensus       228 ~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          228 AYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHhCCcccccceEEEEcC
Confidence            999997653 4555555544

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.63  E-value=3.2e-15  Score=112.31  Aligned_cols=186  Identities=18%  Similarity=0.111  Sum_probs=123.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+.++..+...     +.. .....+.++.+|++|++++.+++++.     ++|
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIAH-----ELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD   82 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999998655321110     000 12357899999999999998888642     799


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      ++||++|....                    +...++++    ++ +..++|++||...+..           ......|
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  151 (235)
T 3l77_A           83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----------IPYGGGY  151 (235)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----------CTTCHHH
T ss_pred             EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----------CCCcchH
Confidence            99999987421                    12223333    22 3456777776554311           1111234


Q ss_pred             -ccHHHHHHHHHh-----cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          130 -KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       130 -~~k~~~e~~~~~-----~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                       .+|...+.+.+.     .+++++.++||.+..+....               ..  . ......+++++|+|++++.++
T Consensus       152 ~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~---------------~~--~-~~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          152 VSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS---------------KP--G-KPKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC---------------CS--C-CCGGGTCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc---------------cC--C-cccccCCCCHHHHHHHHHHHH
Confidence             899998887643     58999999999887763110               00  0 111225678999999999999


Q ss_pred             cCCCC--CCeeEEeeCCee
Q 025908          204 GNEKA--SRQVFNISGEKY  220 (246)
Q Consensus       204 ~~~~~--~~~~~~~~~~~~  220 (246)
                      .++..  .+++....++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          214 KLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TSCTTCCCCEEEECCTTSC
T ss_pred             cCCCCCccceEEEeecccC
Confidence            87543  455555555443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.63  E-value=1.2e-14  Score=114.52  Aligned_cols=193  Identities=11%  Similarity=0.031  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHH----------------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~----------------   62 (246)
                      |||+|.||+++++.|+++|++|++++ |+..+.....     .... ....++.++.+|++|.+                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            79999999999999999999999999 8654421110     0000 11246889999999988                


Q ss_pred             -HHHHhhhcC-----CccEEEecCCCCcc----------------------------------chHHHHHh----CC--C
Q 025908           63 -FVKSSLSAK-----GFDVVYDINGREAD----------------------------------EVEPILDA----LP--N   96 (246)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~~~~~~~----------------------------------~~~~l~~a----~~--~   96 (246)
                       ++.+++++.     ++|++||+||....                                  +...++++    +.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             888777642     79999999986321                                  01112222    22  3


Q ss_pred             ------CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc
Q 025908           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (246)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~  162 (246)
                            ..++|++||...+..           ..+...| .+|..++.+.+       ..+++++.++|+.+.++. . .
T Consensus       207 ~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~  273 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  273 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S
T ss_pred             CcCCCCCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c
Confidence                  579999999776421           1122345 89999887653       358999999999999885 2 2


Q ss_pred             hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      . ...........++   +     ..+.+++|+|++++.++..  ....|+++++.+|..
T Consensus       274 ~-~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          274 P-PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             C-HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             c-HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            1 2222232222211   1     0256799999999999964  334688999998854

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.63  E-value=3.3e-15  Score=112.19  Aligned_cols=169  Identities=17%  Similarity=0.139  Sum_probs=114.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+..        .....++.++.+|++|.+++.+++++.     ++|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999865532110        111236899999999999888877642     7899


Q ss_pred             EEecCCCCcc--------------------ch----HHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~----~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||+||....                    +.    +.++..+. ...++|++||...+..           ......| 
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~  149 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG-----------KANESLYC  149 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS-----------CSSHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC-----------CCCCcHHH
Confidence            9999997321                    12    22333333 2239999998776421           1112235 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..+++++.++||.+..+....     .    .. .         ....+.+++|+|+.++.+
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~----~~-~---------~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN-----T----DH-V---------DPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc-----c----CC-C---------CCcCCCCHHHHHHHHHHH
Confidence            89999887654       357999999999987763110     0    00 0         112467899999999999


Q ss_pred             hcCCC
Q 025908          203 LGNEK  207 (246)
Q Consensus       203 ~~~~~  207 (246)
                      +.++.
T Consensus       211 ~~~~~  215 (235)
T 3l6e_A          211 LEARS  215 (235)
T ss_dssp             TCCCS
T ss_pred             HhCCC
Confidence            97654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.62  E-value=1.6e-15  Score=115.81  Aligned_cols=193  Identities=14%  Similarity=0.197  Sum_probs=123.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+.....     ........++.++.+|++|++++.+++++.     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     011111246888999999999888777542     7999


Q ss_pred             EEecCCCC-cc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|.. ..                    +...++++    +.  +..++|++||...+...           .....
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  156 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence            99999864 11                    11223333    22  45799999997765221           11223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc------------h--HHH-HHHHHHhCCCcccCCCCCc
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~  185 (246)
                      | .+|...+.+.+       ..+++++.++|+.+..+.....            .  ... .........++        
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  228 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------  228 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC--------
Confidence            5 88988876653       3589999999998876521000            0  000 11111111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCC
Q 025908          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~  218 (246)
                       ..+..++|+|++++.++...  ...|+.+.+.+|
T Consensus       229 -~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          229 -RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             -SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence             12567899999999998643  346778877764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.62  E-value=1.1e-15  Score=120.01  Aligned_cols=191  Identities=10%  Similarity=0.055  Sum_probs=114.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|+||.++++.|+++|++|++++|+..+..+...     .....  ...+.++.+|+++.+++.++++..     ++
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA-----TLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765321110     00111  127899999999999888887642     78


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHhCC------------CCceEEEEeecceeccCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a~~------------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                      |+|||+||....                    ++.++++++.            +..++|++||...+...         
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---------  159 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---------  159 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---------
Confidence            999999996321                    2333333322            14479999998775321         


Q ss_pred             CCCCCCcc-ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCC-Cceeeeee
Q 025908          122 TVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSG-IQVTQLGH  191 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~  191 (246)
                        .....| .+|..++.+.       ...+++++.++|+.+.++..... .....+............... ......++
T Consensus       160 --~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (319)
T 3ioy_A          160 --GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME  237 (319)
T ss_dssp             --SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBC
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCC
Confidence              112234 8999665543       24689999999999988642111 000000000000000000000 01112278


Q ss_pred             HHHHHHHHHHHhcCCC
Q 025908          192 VKDLARAFVQVLGNEK  207 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~~  207 (246)
                      ++|+|+.++.+++.+.
T Consensus       238 pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          238 PDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999998753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.62  E-value=6e-15  Score=111.99  Aligned_cols=190  Identities=14%  Similarity=0.114  Sum_probs=124.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccC--CCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~--~~~~~~~~~~~~~-----~   72 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     .... ....+.++.+|+  ++.+++.+++++.     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVAS-----HINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998655321110     0111 123788999999  8888887777542     7


Q ss_pred             ccEEEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|++||++|....                     +...++++    +.  +..++|++||...+..           ..+
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~  161 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-----------RAN  161 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-----------CCC
Confidence            9999999986311                     12223333    22  5679999999776421           112


Q ss_pred             CCcc-ccHHHHHHHHH----h--cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~----~--~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      ...| .+|...+.+.+    +  ..++++.+.|+.+..+         +........         ....+.+++|+|++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~~  223 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTE---------DPQKLKTPADIMPL  223 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTC---------CGGGSBCTGGGHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCcc---------chhccCCHHHHHHH
Confidence            2335 89999887653    2  2388899999887654         111111111         11235678999999


Q ss_pred             HHHHhcCC--CCCCeeEEeeCCeeecHH
Q 025908          199 FVQVLGNE--KASRQVFNISGEKYVTFD  224 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~~~s~~  224 (246)
                      +++++...  ...|+.+++.+|...++.
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            99998653  357899999999876654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.61  E-value=1.8e-15  Score=114.78  Aligned_cols=185  Identities=17%  Similarity=0.207  Sum_probs=120.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh---hcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+|.||.++++.|+++|++|++++|+..+..+...     ....   ....+.++.+|++|.+++.+++++     .+
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHD-----EIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHH-----HHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999998755321110     0000   015788999999999988887764     27


Q ss_pred             ccEEEecCCCCcc-------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        73 ~d~vi~~~~~~~~-------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +|++||+||....                   +...++++    ++  +..++|++||...+..           ..+..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG  156 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence            9999999987322                   12223333    22  5679999999776421           11233


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..|++++.++||.+..+         +....  ....       ....+++++|+|+++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~--~~~~-------~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKA--GTPF-------KDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHT--TCCS-------CGGGSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhc--CCCc-------ccccCCCHHHHHHHH
Confidence            45 89998887653       35899999999988665         11111  1111       123477899999999


Q ss_pred             HHHhcCCCC---CCeeEEeeCCe
Q 025908          200 VQVLGNEKA---SRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~~~~---~~~~~~~~~~~  219 (246)
                      +.++..+..   .+.++.+.+++
T Consensus       219 ~~l~s~~~~~~~~~~~i~vd~~~  241 (250)
T 3nyw_A          219 RCLLNLSENVCIKDIVFEMKKSI  241 (250)
T ss_dssp             HHHHTSCTTEECCEEEEEEHHHH
T ss_pred             HHHHcCCCceEeeEEEEEeeccc
Confidence            999986532   23344554443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.61  E-value=4.2e-15  Score=111.36  Aligned_cols=169  Identities=14%  Similarity=0.074  Sum_probs=112.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC--CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--~~d~vi~   78 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...        .....+.++.+|+++.+++.+++++.  ..|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN--------CLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            7999999999999999999999999998765321111        11357889999999999999998742  2499999


Q ss_pred             cCCCCcc--------------------chHHHHH----hCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           79 INGREAD--------------------EVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        79 ~~~~~~~--------------------~~~~l~~----a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ++|....                    +...+++    .+. ...++|++||...+..           ..+...| .+|
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK  147 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------KAQESTYCAVK  147 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------CTTCHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------CCCCchhHHHH
Confidence            9986421                    1222333    233 2238999999877522           1122345 899


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ...+.+.+       ..+++++.++||.+..+..         .....  ..       ....+.+++|+|++++.++.+
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---------~~~~~--~~-------~~~~~~~~~dvA~~i~~l~~~  209 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW---------ETSGK--SL-------DTSSFMSAEDAALMIHGALAN  209 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHH---------HhcCC--CC-------CcccCCCHHHHHHHHHHHHhC
Confidence            99887753       2489999999998876621         11000  01       123567899999999999875


Q ss_pred             C
Q 025908          206 E  206 (246)
Q Consensus       206 ~  206 (246)
                      +
T Consensus       210 ~  210 (230)
T 3guy_A          210 I  210 (230)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.61  E-value=5.5e-15  Score=112.34  Aligned_cols=192  Identities=13%  Similarity=0.134  Sum_probs=126.5

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||+++++.|+++|  +.|+++.|+..+..+..        .....++.++.+|++|.+++.+++++.     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK--------EKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH--------HHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH--------HHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            7999999999999999985  78888888765421110        112357899999999999988887643     79


Q ss_pred             cEEEecCCCCcc---------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||++|....                     +...+++++    + ...++|++||...+..           ..+..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~-----------~~~~~  148 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY-----------FSSWG  148 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS-----------SCCSH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC-----------CCCcc
Confidence            999999986311                     122233332    3 2369999999776421           12233


Q ss_pred             cc-ccHHHHHHHHHh-----cCCceEEeecceeeCCCCCCc--------hHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          128 RH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       128 ~~-~~k~~~e~~~~~-----~~~~~~ilR~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      .| .+|...+.+.+.     .+++++.++|+.+.++.....        .............+.         ..+.+++
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~  219 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN---------NQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT---------C----CH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc---------CCcCCcc
Confidence            45 899999877642     489999999999988742111        011122222111111         2356789


Q ss_pred             HHHHHHHHHhcCCC---CCCeeEEeeCCee
Q 025908          194 DLARAFVQVLGNEK---ASRQVFNISGEKY  220 (246)
Q Consensus       194 D~a~~~~~~~~~~~---~~~~~~~~~~~~~  220 (246)
                      |+|++++.++....   ..|+.+++.+++.
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence            99999999986542   5788998888764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.61  E-value=2e-14  Score=111.01  Aligned_cols=192  Identities=13%  Similarity=0.086  Sum_probs=127.8

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhcC----
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK----   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~----   71 (246)
                      |||+|.||+++++.|+++|+   +|+++.|+.....+...     ....  ....+.++.+|++|.+++.+++++.    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK-----TIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----HHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHH-----HHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   99999998655321110     0000  0246889999999999999888753    


Q ss_pred             -CccEEEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCC
Q 025908           72 -GFDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (246)
Q Consensus        72 -~~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (246)
                       ++|++||+||....                     +...++++    +.  +..++|++||...+..           .
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~  182 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA-----------Y  182 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------C
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-----------C
Confidence             69999999986420                     12223333    22  5679999999776421           1


Q ss_pred             CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC---CCchHHHHHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                      .....| .+|...+.+.+       ..|++++.++||.+..+..   ............ .            ...++++
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~------------~~~p~~p  249 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVY-K------------DTTPLMA  249 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHH-T------------TSCCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhh-c------------ccCCCCH
Confidence            122335 89998887653       3689999999999988620   000000000000 0            0123479


Q ss_pred             HHHHHHHHHHhcCCC--CCCeeEEeeCCeee
Q 025908          193 KDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (246)
Q Consensus       193 ~D~a~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (246)
                      +|+|++++.++..+.  ..++++.+.+++..
T Consensus       250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          250 DDVADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence            999999999997654  25788888887753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.60  E-value=9.4e-15  Score=110.58  Aligned_cols=180  Identities=17%  Similarity=0.122  Sum_probs=117.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|++++.+++++     .++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALG-----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     01111134688999999999988887763     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +...+++++    .  + .++|++||...+..           ..+...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  155 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNAAVY  155 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCCcHH
Confidence            9999986321                    122233332    2  4 79999999776421           1122335


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|++++.++|+.+.++................   .  ++    ...+++.+|+|++++.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~---~--~~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ---R--IS----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH---H--TT----TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh---c--cc----ccCCCCHHHHHHHHHH
Confidence             88988876653       368999999999998864211000111011110   0  11    1125789999999999


Q ss_pred             HhcCC
Q 025908          202 VLGNE  206 (246)
Q Consensus       202 ~~~~~  206 (246)
                      ++..+
T Consensus       227 l~s~~  231 (247)
T 2jah_A          227 AVTAP  231 (247)
T ss_dssp             HHHSC
T ss_pred             HhCCC
Confidence            99764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.59  E-value=1.6e-14  Score=111.29  Aligned_cols=181  Identities=13%  Similarity=0.115  Sum_probs=117.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcC-----Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d   74 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     +... ....+.++.+|++|.+++.+++++.     ++|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG-----EIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998655221110     0111 1123588999999999888887643     789


Q ss_pred             EEEecCCCCcc---------------------c----hHHHHHhCC--C--CceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        75 ~vi~~~~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      ++||+||....                     +    ++.++..+.  +  ..++|++||...+.           +..+
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~  182 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-----------PRPN  182 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------CCTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------CCCC
Confidence            99999986421                     1    122222222  2  46899999977642           1122


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...| .+|...+.+.+       ..+++++.++|+.+..+..         ...... .... ........+++++|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~-~~~~-~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG-VLQA-NGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECT-TSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch-hhhh-hhcccccCCCCHHHHHH
Confidence            3345 89998887653       3689999999999877621         111110 0000 11112234678999999


Q ss_pred             HHHHHhcCCCC
Q 025908          198 AFVQVLGNEKA  208 (246)
Q Consensus       198 ~~~~~~~~~~~  208 (246)
                      +++.++.++..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999987653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.59  E-value=1.4e-15  Score=117.26  Aligned_cols=192  Identities=15%  Similarity=0.136  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++.|+..+..+..        ......+.++.+|+++.+++.+++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532110        112357899999999998888777642     7899


Q ss_pred             EEecCCCCcc-------------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD-------------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~-------------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||+||....                         +...+++++    . +..++|++||...+..           ...
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  151 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----------NGG  151 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----------SSS
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----------CCC
Confidence            9999986311                         111223332    2 2358999998776421           112


Q ss_pred             CCcc-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCc---hHH------HHHHHHHhCCCcccCCCCCceeee
Q 025908          126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP---VEE------WFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ...| .+|...+.+.+.      ..++++.+.||.+..+.....   ...      ..........++         ..+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  222 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRM  222 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCC
Confidence            2335 899998877642      239999999999987632110   000      011112222221         235


Q ss_pred             eeHHHHHHHHHHHhcCC---CCCCeeEEeeCCee
Q 025908          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  220 (246)
                      ..++|+|++++.++..+   ...|+.+++.+|..
T Consensus       223 ~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             CCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            56899999999999732   25789999999854

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.58  E-value=1.3e-15  Score=115.22  Aligned_cols=180  Identities=16%  Similarity=0.171  Sum_probs=106.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHH---HHhhhc-CCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSA-KGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~---~~~~~~-~~~d~v   76 (246)
                      |||+|+||+++++.|.+ |++|+++.|+..+......          ..++..+.+|+.+.+..   .+.++. .++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999987 8999999998655321111          25688999999876442   222222 269999


Q ss_pred             EecCCCCcc--------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           77 YDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        77 i~~~~~~~~--------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      ||++|....                    +    ++.++..++ ...++|++||...+...           .+...| .
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  148 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPH-----------PGNTIYAA  148 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCC-----------CCchHHHH
Confidence            999987421                    1    122222222 23689999998775321           122345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...+.+.+       ..+++++.++||.+.++....     +...    .     ........+++++|+|++++.++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~----~-----~~~~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDS----Q-----GTNFRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhh----h-----hcccccccCCCHHHHHHHHHHHH
Confidence            9999987763       368999999999998873111     1100    0     00011234778999999999999


Q ss_pred             cCCCCCCeeEEeeC
Q 025908          204 GNEKASRQVFNISG  217 (246)
Q Consensus       204 ~~~~~~~~~~~~~~  217 (246)
                      +.+. .+.++++.-
T Consensus       215 ~~~~-~~~~~~i~~  227 (245)
T 3e9n_A          215 DAGE-TTQITNVDV  227 (245)
T ss_dssp             TSCT-TEEEEEEEE
T ss_pred             cCCC-ccceeeeEE
Confidence            8765 456777654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.58  E-value=1e-13  Score=106.05  Aligned_cols=197  Identities=17%  Similarity=0.132  Sum_probs=130.0

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhcC-----C
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~   72 (246)
                      |||+  |.||.++++.|+++|++|+++.|+..+......    .+. .....++.++.+|++|.+++.+++++.     +
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV----KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH----HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH----HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999  899999999999999999999988765311100    001 112357889999999999988887642     7


Q ss_pred             ccEEEecCCCCcc--------------------chHHHHHhC----C--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        73 ~d~vi~~~~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +|++||+||....                    +...+++++    .  +..++|++||...+...         ...+.
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  172 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQEQ  172 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSCC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCCC
Confidence            8999999986421                    122233332    2  55699999997763211         11122


Q ss_pred             Ccc-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          127 SRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      ..| .+|...+.+.+.      ..++++.+.|+.+..+... .........+....+         ...+.+++|+|+++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~---------~~r~~~~~dva~~~  242 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMIP---------MGRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTST---------TSSCEETHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcCC---------CCCCcCHHHHHhHh
Confidence            335 899998887642      2378999999998876421 111222222222221         12466789999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCee
Q 025908          200 VQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      +.++..  ....|+.+++.+|..
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGG
T ss_pred             heeecCccccccCCEEEECCcee
Confidence            999965  345688999998854

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.57  E-value=3.1e-14  Score=109.34  Aligned_cols=186  Identities=16%  Similarity=0.127  Sum_probs=119.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC--chhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||+++++.|.++|++|++++|+..+.........  .........++.++.+|++|.+++.+++++.     ++
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   91 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGI   91 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998766322111100  0111222467889999999999888877642     79


Q ss_pred             cEEEecCCCCcc--------------------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||+||....                    +.    +.++..+.  +..++|++||...+....         ..+..
T Consensus        92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~~  162 (274)
T 3e03_A           92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---------WGAHT  162 (274)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---------HHHCH
T ss_pred             CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------CCCCc
Confidence            999999986321                    11    22333333  457999999876642100         11122


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..|++++.+.|+.+....        +... ....+         ...+.+++|+|+++
T Consensus       163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~--------~~~~-~~~~~---------~~~~~~pedvA~~v  224 (274)
T 3e03_A          163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD--------AINM-LPGVD---------AAACRRPEIMADAA  224 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCC---------GGGSBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc--------hhhh-ccccc---------ccccCCHHHHHHHH
Confidence            35 89998887653       368999999998533321        0000 01111         12256799999999


Q ss_pred             HHHhcCCC--CCCeeE
Q 025908          200 VQVLGNEK--ASRQVF  213 (246)
Q Consensus       200 ~~~~~~~~--~~~~~~  213 (246)
                      +.++....  ..|+.+
T Consensus       225 ~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          225 HAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHTSCCTTCCSCEE
T ss_pred             HHHhCccccccCCeEE
Confidence            99996542  345555

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.57  E-value=4.9e-14  Score=109.19  Aligned_cols=193  Identities=11%  Similarity=0.040  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHH----------------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~----------------   62 (246)
                      |||+|.||+++++.|+++|++|++++ |+........     .+.. ....++.++.+|+++.+                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            79999999999999999999999999 8754421110     0010 11357889999999988                


Q ss_pred             -HHHHhhhcC-----CccEEEecCCCCcc-----------------------c-----------hHHHHHh----CC--C
Q 025908           63 -FVKSSLSAK-----GFDVVYDINGREAD-----------------------E-----------VEPILDA----LP--N   96 (246)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~~~~~~~-----------------------~-----------~~~l~~a----~~--~   96 (246)
                       ++.+++++.     ++|++||+||....                       .           ...++++    +.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             888777642     79999999986321                       0           1112222    22  3


Q ss_pred             ------CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc
Q 025908           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (246)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~  162 (246)
                            ..++|++||...+..           ......| .+|...+.+.+       ..+++++.++|+.+..+. .  
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             CCCCCCCcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence                  578999999776421           1122345 88998887653       358999999999987764 1  


Q ss_pred             hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      .............++   +     ..+.+++|+|++++.++...  ...|+.+++.++..
T Consensus       236 ~~~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             SCHHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            112222222221111   1     02557899999999999642  34688999988854

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.56  E-value=3.1e-14  Score=110.11  Aligned_cols=173  Identities=15%  Similarity=0.104  Sum_probs=115.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ...... ..++.++.+|++|.+++.+++++     .++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865521110     000111 13688999999999888887753     2799


Q ss_pred             EEEec-CCCCcc-------------------chHHHHHhC----C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           75 VVYDI-NGREAD-------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        75 ~vi~~-~~~~~~-------------------~~~~l~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      ++||+ ++....                   +..++++++    . +..++|++||...+..           ..+...|
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMVAAY  177 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTCHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------CCCccHH
Confidence            99999 554211                   122233332    2 3469999999876422           1122335


Q ss_pred             -ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                       .+|...+.+.+         ..++++++++||.+.++.         ......         +.....+++.+|+|+.+
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~---------~~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVS---------GIVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSC---------GGGGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhcc---------ccccCCCCCHHHHHHHH
Confidence             88988887652         247999999999876651         111100         01123567899999999


Q ss_pred             HHHhcCCC
Q 025908          200 VQVLGNEK  207 (246)
Q Consensus       200 ~~~~~~~~  207 (246)
                      +.++..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99997654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.56  E-value=8.8e-14  Score=110.07  Aligned_cols=191  Identities=15%  Similarity=0.109  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCC--chhhhhhcCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||.++++.|+++|++|+++.|+..+..+......  ..+.......+.++.+|++|.+++.+++++.     ++
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  130 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGI  130 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998876322211110  0112222457889999999999988888643     89


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||+||....                    +...++++    ++  +..++|++||...+...         +..+..
T Consensus       131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~~  201 (346)
T 3kvo_A          131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQHC  201 (346)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSSH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCch
Confidence            999999986321                    12233333    23  55799999997764221         011223


Q ss_pred             cc-ccHHHHHHHHH----h--cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       128 ~~-~~k~~~e~~~~----~--~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .| .+|...+.+.+    +  .+++++.+.|+.+....        +........+         ...+..++|+|++++
T Consensus       202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------~~~~~~~~~~---------~~r~~~pedvA~~v~  264 (346)
T 3kvo_A          202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------AMDMLGGPGI---------ESQCRKVDIIADAAY  264 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------HHHHHCC--C---------GGGCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------HHHhhccccc---------cccCCCHHHHHHHHH
Confidence            45 89998887653    2  57999999998633321        1222111111         123557899999999


Q ss_pred             HHhcCCC-CCCeeEEeeCC
Q 025908          201 QVLGNEK-ASRQVFNISGE  218 (246)
Q Consensus       201 ~~~~~~~-~~~~~~~~~~~  218 (246)
                      .++.... ..|+.+ +.++
T Consensus       265 ~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          265 SIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHTSCTTCCSCEE-EHHH
T ss_pred             HHHhcCCCCCceEE-ECCc
Confidence            9997632 355555 5443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.56  E-value=6.9e-14  Score=106.39  Aligned_cols=191  Identities=17%  Similarity=0.170  Sum_probs=127.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|.+|++..|+.+...+.        ..+...++..+.+|++|++++++++++     .++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~--------~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA--------IAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987653221        122346788899999999888887754     27999


Q ss_pred             EEecCCCCcc--------------------chHHHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||+||....                    +.-.+.++    +++..++|++||...+...           .....| .
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~-----------~~~~~Y~a  175 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT-----------PAFSVYAA  175 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-----------TTCHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-----------CCchHHHH
Confidence            9999987422                    12223333    2244589999987663211           112235 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc------hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      +|..+..+.+       ..||++..+.||.+..|.....      ....+...+....++.-         +-.++|+|+
T Consensus       176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~  246 (273)
T 4fgs_A          176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VGRAEEVAA  246 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            8988887653       4689999999999877642110      01122333333333321         334899999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCe
Q 025908          198 AFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +++.++..  ....|+.+.+.||.
T Consensus       247 ~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          247 AALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhcCccCCeEeECcCh
Confidence            99999954  34578899998874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.55  E-value=6.6e-14  Score=115.57  Aligned_cols=198  Identities=17%  Similarity=0.128  Sum_probs=127.9

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC----CccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d~   75 (246)
                      |||+|+||.++++.|.++|++ |++++|+...... .. ....+......++.++.+|++|.+++.+++++.    .+|+
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-AG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999985 9999997643110 00 000111222357889999999999999998743    4699


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHH
Q 025908           76 VYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (246)
                      |||++|....                    ++.++.+++.  +..+||++||...+....          ....|..+|.
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~----------g~~~Yaaaka  379 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP----------GLGGYAPGNA  379 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT----------TCTTTHHHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC----------CCHHHHHHHH
Confidence            9999986422                    3455667765  678999999976532111          1123447888


Q ss_pred             HHHHHH---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       134 ~~e~~~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      ..+.+.   +..|+++++++|+.+.+++...        .... ..+   .  .....+++.+|+++++..++..+..  
T Consensus       380 ~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~--------~~~~-~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~--  443 (486)
T 2fr1_A          380 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAE--------GPVA-DRF---R--RHGVIEMPPETACRALQNALDRAEV--  443 (486)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS--
T ss_pred             HHHHHHHHHHhcCCeEEEEECCeeCCCcccc--------hhHH-HHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC--
Confidence            877654   4579999999999887753110        0000 001   1  1235689999999999999987542  


Q ss_pred             eeEEeeCCeeecHHHHHHHH
Q 025908          211 QVFNISGEKYVTFDGLARAC  230 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~  230 (246)
                      .+ .+.   .+.|..+...+
T Consensus       444 ~~-~v~---~~d~~~~~~~~  459 (486)
T 2fr1_A          444 CP-IVI---DVRWDRFLLAY  459 (486)
T ss_dssp             SC-EEC---EECHHHHHHHH
T ss_pred             eE-EEE---eCCHHHHhhhh
Confidence            12 222   25677765544

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.55  E-value=2.1e-13  Score=102.71  Aligned_cols=194  Identities=13%  Similarity=0.108  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|.+|.+..|+.++..+..     .+......++..+.+|++|++++++++++     .++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111     11222346788999999999988887754     27999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                     +    ++.++..+.  +.-++|++||...+..           ......
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~-----------~~~~~~  156 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG-----------GFAGAP  156 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS-----------SSSCHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC-----------CCCChH
Confidence            9999985321                     1    233333333  5568999999776311           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHHHHHHHHHh-CCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|..+..+.+       ..||++..+.||.+-.|.....  ........... ..++   +      -+-.++|+|+
T Consensus       157 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~------R~g~pediA~  227 (254)
T 4fn4_A          157 YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS---S------RLAEPEDIAN  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC---C------CCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC---C------CCcCHHHHHH
Confidence            5 88988876653       4789999999999877642111  01111111111 1111   1      1334899999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCe
Q 025908          198 AFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +++.++..  ....|+.+.+.+|.
T Consensus       228 ~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          228 VIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCCcCCEEEeCCCc
Confidence            99999854  34578899998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.54  E-value=1.4e-13  Score=104.52  Aligned_cols=192  Identities=15%  Similarity=0.103  Sum_probs=117.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHH-hhhc-CCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSA-KGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~~-~~~d~vi~   78 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.... .     ........+..+  |..+.+.+.+ +.+. .++|++||
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~-----~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-E-----AFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-H-----HHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H-----HHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999999999999976552110 0     011111233333  5554433322 2221 27999999


Q ss_pred             cCCCC-cc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           79 INGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        79 ~~~~~-~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      ++|.. ..                    +...++++    +.  +..++|++||...+..           ..+...| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------CCCchHHHH
Confidence            99865 21                    11223333    22  4579999999776421           1122345 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHH-------HHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-------FHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      +|...+.+.+       ..+++++.++|+.++|+.........+       ........+         ...+.+++|+|
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA  218 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQRLGTQKELG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCCCcCHHHHH
Confidence            9999887653       358999999999998875322111111       111111111         11356799999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ++++.++...  ...|+.+++.++..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            9999998754  24688999988753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.54  E-value=1.1e-13  Score=106.13  Aligned_cols=192  Identities=15%  Similarity=0.103  Sum_probs=123.0

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-------
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-------   71 (246)
                      |||  +|.||+++++.|+++|++|++++|+..+..+.+..       ....++.++.+|++|++++.+++++.       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-------hcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  99999999999999999999999986542111100       01246788999999999988888642       


Q ss_pred             -CccEEEecCCCCcc-------------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCC
Q 025908           72 -GFDVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        72 -~~d~vi~~~~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                       ++|++||++|....                         +...+++++.    ...++|++||...++           
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence             79999999986430                         1122333332    225899999865421           


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-------CchH----HHHHHHHHhCCCcccCCC
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-------NPVE----EWFFHRLKAGRPIPIPGS  182 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-------~~~~----~~~~~~~~~~~~~~~~~~  182 (246)
                       ......| .+|...+.+.+       ..+++++.++|+.+..+...       ....    ..+........++   + 
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-
Confidence             1112335 88998887653       35899999999988664100       0000    0001111111111   1 


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          183 GIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                          +.+..++|+|++++.++...  ...|+.+.+.+|.
T Consensus       230 ----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          230 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             ----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence                02445799999999999653  3468899998874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.54  E-value=5.6e-13  Score=101.13  Aligned_cols=185  Identities=16%  Similarity=0.172  Sum_probs=121.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|++..|+....   +            .....+.+|+++++++..+++.     .++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEG---L------------PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---S------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhC---C------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999975441   1            2334688999999888777753     26999


Q ss_pred             EEecCCCCcc----------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                      +    ++.++..+.  +..++|++||....-.         .+ ....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~---------~~-~~~~  151 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP---------LP-ESTT  151 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------CT-TTCH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC---------CC-CccH
Confidence            9999985311                      1    222333333  5578999998765311         01 1123


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-----------c--hHHHHHHHHHhCCCcccCCCCCce
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------P--VEEWFFHRLKAGRPIPIPGSGIQV  186 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      +| .+|..++.+.+       ..||+++.+.||.+-.+....           .  ....+........++         
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------  222 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL---------  222 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT---------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC---------
Confidence            45 78988887653       478999999999886652000           0  000011111111111         


Q ss_pred             eeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          187 TQLGHVKDLARAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .-+..++|+|++++.++..  ....|+.+.+.+|-
T Consensus       223 gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          223 GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            1245689999999999854  34578899998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.53  E-value=3.9e-13  Score=102.11  Aligned_cols=194  Identities=10%  Similarity=0.072  Sum_probs=127.0

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||+|  -||.++++.|.++|++|.+..|+.....+. .    ....+. ..++..+.+|+++++++.+++++     .+
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~-~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-E----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHH-H----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68876  799999999999999999999986552111 0    011111 24788999999999888877753     27


Q ss_pred             ccEEEecCCCCcc-------------chH-----------HHHHh----CCCCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD-------------EVE-----------PILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        73 ~d~vi~~~~~~~~-------------~~~-----------~l~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      +|+++|+++....             ...           .+..+    +++..++|++||.....           +..
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------~~~  155 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------AVQ  155 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------CCT
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------Ccc
Confidence            9999999986311             000           01111    22446899999876531           111


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|..++.+.+       ..||+++.+.||.+-.+.... .........+....++.-         +..++|+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~peev  226 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR---------NVDQVEV  226 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS---------CCCHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC---------CcCHHHH
Confidence            12235 88988877653       468999999999887764221 112334444444333322         3348999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      |+++++++..  ....|+.+.+.+|.
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            9999999854  34578899998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.53  E-value=1.1e-13  Score=114.76  Aligned_cols=198  Identities=19%  Similarity=0.205  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||+|+||.++++.|.++|+ +|++++|+...... .. ....+......++.++.+|++|.+++.+++++..+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-AA-ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HH-HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999998 58888987643110 00 00011112234688999999999999999985569999999


Q ss_pred             CCCCcc--------------------chHHHHHhCC---CCceEEEEeecce-eccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           80 NGREAD--------------------EVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        80 ~~~~~~--------------------~~~~l~~a~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      +|....                    ++.++.+++.   +.++||++||... +|..            ....| .+|..
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~YaaaKa~  410 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------GQGAYAAANAA  410 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------TBHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------CCHHHHHHHHH
Confidence            987422                    2445666665   4679999999754 3211            12234 88998


Q ss_pred             HHHHHH---hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe
Q 025908          135 TESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (246)
Q Consensus       135 ~e~~~~---~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (246)
                      .+.+.+   ..|+++++++|+.+.+.+.......   ..+..           ....+++.+|+++++..++..+..   
T Consensus       411 ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---  473 (511)
T 2z5l_A          411 LDALAERRRAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---  473 (511)
T ss_dssp             HHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---
T ss_pred             HHHHHHHHHHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---
Confidence            887764   5789999999998743322112111   11110           113467899999999999976542   


Q ss_pred             eEEeeCCeeecHHHHHHHHHH
Q 025908          212 VFNISGEKYVTFDGLARACAK  232 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~  232 (246)
                      .+.+..   +.|..+...+..
T Consensus       474 ~v~v~~---~d~~~~~~~~~~  491 (511)
T 2z5l_A          474 CVTVVD---VDWERFAPATNA  491 (511)
T ss_dssp             EEEECC---BCHHHHHHHHHH
T ss_pred             EEEEEe---CCHHHHHhhhcc
Confidence            222332   457777666543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.53  E-value=5.1e-14  Score=107.38  Aligned_cols=184  Identities=16%  Similarity=0.082  Sum_probs=113.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||+|+||+++++.|+++|++|++++|+..+.....     .+......++.++.+|++|++++.+++++      .++|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            799999999999999999999999999765421110     01111134688899999999888777653      2589


Q ss_pred             EEEecCCCCc----------------c-----------ch----HHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC
Q 025908           75 VVYDINGREA----------------D-----------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (246)
Q Consensus        75 ~vi~~~~~~~----------------~-----------~~----~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (246)
                      ++||++|...                .           +.    +.++..+.  +..++|++||...+..          
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  155 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY----------  155 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------
Confidence            9999994210                0           11    22233332  5579999999876421          


Q ss_pred             CCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                        .+...| .+|...+.+.+       ..+++++.++||.+..+.........   .............  ....+..++
T Consensus       156 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pe  228 (260)
T 2qq5_A          156 --MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKS--AFSSAETTE  228 (260)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHh--hhccCCCHH
Confidence              122345 89999988753       35899999999999887421110000   0000000000000  001135789


Q ss_pred             HHHHHHHHHhcCC
Q 025908          194 DLARAFVQVLGNE  206 (246)
Q Consensus       194 D~a~~~~~~~~~~  206 (246)
                      |+|++++.++..+
T Consensus       229 ~va~~v~~l~s~~  241 (260)
T 2qq5_A          229 LSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHTCT
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999999764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.52  E-value=1.1e-13  Score=103.48  Aligned_cols=192  Identities=18%  Similarity=0.145  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||++-||+++++.|.++|.+|.+..|+.....       .....+...++..+.+|++|++.++++++..++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999998754310       0112223467889999999999998888767899999999


Q ss_pred             CCCcc--------------------c----hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           81 GREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        81 ~~~~~--------------------~----~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      |....                    +    ++.++..+.   +.-++|++||...+...           .....| .+|
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-----------~~~~~Y~asK  156 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-----------IRVPSYTAAK  156 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------SSCHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-----------CCChHHHHHH
Confidence            97432                    1    222333332   24689999997763211           112235 889


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      ..+..+.+       ..||++..+.||.+..|...... .......+.+..++.         -+-.++|+|.+++.++.
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaS  227 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG---------RWGHSEDIAGAAVFLSS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS---------SCBCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhC
Confidence            88877653       47899999999998776310000 011122222322321         13347999999999985


Q ss_pred             CC--CCCCeeEEeeCCe
Q 025908          205 NE--KASRQVFNISGEK  219 (246)
Q Consensus       205 ~~--~~~~~~~~~~~~~  219 (246)
                      ..  ...|+.+.+.+|.
T Consensus       228 d~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          228 AAADYVHGAILNVDGGW  244 (247)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCCcCCeEEECccc
Confidence            43  3578899998874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.52  E-value=3.2e-13  Score=102.17  Aligned_cols=181  Identities=15%  Similarity=0.105  Sum_probs=117.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccC--CCHHHHHHhhhcC-----C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~--~~~~~~~~~~~~~-----~   72 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...     .... ...+..++.+|+  .+.+++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSD-----QIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHH-----HHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998655321110     0001 124677788877  8888877776532     7


Q ss_pred             ccEEEecCCCCcc---------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           73 FDVVYDINGREAD---------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        73 ~d~vi~~~~~~~~---------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +|++||++|....                     +...++++    ++  +..++|++||...+..           ..+
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  163 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-----------RAN  163 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-----------CCC
Confidence            9999999986311                     12223333    33  5679999998776421           112


Q ss_pred             CCcc-ccHHHHHHHHH-------h-cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|...+.+.+       . .+++++.++||.+..+         +........         ....+...+|+|
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva  225 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPDE---------NPLNNPAPEDIM  225 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTTS---------CGGGSCCGGGGT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhccccc---------CccCCCCHHHHH
Confidence            2345 89998887653       2 5789999999987654         111111111         112355689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEe
Q 025908          197 RAFVQVLGNE--KASRQVFNI  215 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~  215 (246)
                      ++++.++...  ...|+.+++
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            9999998643  335655543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.52  E-value=5.6e-14  Score=105.93  Aligned_cols=194  Identities=14%  Similarity=0.139  Sum_probs=128.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|.+|.+..|+.+...+..     .+..+...++..+.+|++|++++++++++     .++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            899999999999999999999999999765532211     11122235788899999999888877754     26999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +    ++.++..+.   +..++|++||...+....           ....
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~-----------~~~~  158 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP-----------TVAP  158 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT-----------TCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC-----------Cchh
Confidence            9999997432                    1    223333332   346899999977642111           1223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|..+..+.+       ..||++..+.||.+..|...... ...+...+....++.         -+-.++|+|+++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pediA~~v  229 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RWGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CCcCHHHHHHHH
Confidence            5 88988877653       47899999999998776311000 011122222222321         134579999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCe
Q 025908          200 VQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +.++..  ....|+.+.+.+|.
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCCEEEECCCe
Confidence            999854  34578899998874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.49  E-value=1.1e-12  Score=99.23  Aligned_cols=194  Identities=18%  Similarity=0.180  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|.+|.+..|+..... ..     ....+...++..+.+|++|++++++++++     .++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FL-----DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HH-----HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HH-----HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 11     11222346789999999999888777754     27999


Q ss_pred             EEecCCCCcc-------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~-------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||+||....                   +    .+.++..++ +..++|++||...+....           ....| .
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-----------~~~~Y~a  155 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG-----------NTSGYCA  155 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS-----------SCHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC-----------CchHHHH
Confidence            9999986421                   1    222333333 336899999977642211           12235 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-----HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      +|..++.+.+       ..||++..+.||.+..|......     ............++   +     .-+-.++|+|++
T Consensus       156 sKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~  227 (258)
T 4gkb_A          156 SKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADT  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHH
Confidence            8988887653       47899999999998876421110     01112222222222   1     124458999999


Q ss_pred             HHHHhcC--CCCCCeeEEeeCCe
Q 025908          199 FVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++.++..  ....|+.+.+.+|.
T Consensus       228 v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          228 AVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCccCCeEEECCCc
Confidence            9999854  34578999998884

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.46  E-value=3.9e-13  Score=101.46  Aligned_cols=188  Identities=14%  Similarity=0.149  Sum_probs=113.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEE-e--cCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHH-HHhhhc-CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA-KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l-~--r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~~-~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|+++ .  |+..+......        .. .+..+.  |..+.+.+ +++.+. .++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~--------~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--------EN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH--------HS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHH--------Hh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998 5  87544211100        00 122222  44443333 233322 26999


Q ss_pred             EEecCCCCcc-----------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD-----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (246)
Q Consensus        76 vi~~~~~~~~-----------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (246)
                      +||++|....                       +...++++    +.  +..++|++||...+...           ...
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~  144 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYN  144 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTC
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCc
Confidence            9999985422                       11123333    22  45799999998775321           122


Q ss_pred             Ccc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC--CchH-HHHHHHHHh-CCCcccCCCCCceeeeeeHHH
Q 025908          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D  194 (246)
                      ..| .+|...+.+.+       ..+++++.++|+.+..+...  .... ......... ..+.         ..+.+.+|
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pe~  215 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL---------GRLGRPDE  215 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT---------CSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC---------CCCcCHHH
Confidence            334 89999887653       35899999999998776320  0000 001111111 1111         12567999


Q ss_pred             HHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      +|++++.++...  ...|+.+.+.++.
T Consensus       216 vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          216 MGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHcCccccCccCCEEEeCCCC
Confidence            999999999754  2467888888763

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.45  E-value=1.1e-12  Score=107.40  Aligned_cols=191  Identities=15%  Similarity=0.113  Sum_probs=121.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC------Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~------~~d   74 (246)
                      |||+|.||.++++.|.++|.+|+++.|+....  .+.    ....  ..++.++.+|++|.+++.+++++.      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~--~l~----~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAE--DLK----RVAD--KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHH--HHH----HHHH--HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHH--HHH----HHHH--HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            79999999999999999999999998864321  000    0000  235678999999988888777532      399


Q ss_pred             EEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +|||++|....                    +..++.++    +.  +..+||++||...+....           ....
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g~~~  359 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------GQTN  359 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------TCHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------CCHH
Confidence            99999997432                    22333333    22  456999999977642211           1223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..|++++.+.|+.+.++..... ............++         ..+...+|+|+++.
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~l---------~r~g~pedvA~~v~  429 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRRLNSL---------FQGGQPVDVAELIA  429 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHhhccc---------cCCCCHHHHHHHHH
Confidence            4 88987766543       3689999999999987632110 00000011111111         12346899999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCee
Q 025908          201 QVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +++...  ...|+++++.++..
T Consensus       430 fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          430 YFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             HHHCGGGTTCCSCEEEESSSBS
T ss_pred             HHhCCccCCCCCcEEEECCccc
Confidence            998643  35788999988753

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.45  E-value=4.1e-13  Score=104.94  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=59.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCH-HHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY-DFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~-~~~~~~~~~-----~~~   73 (246)
                      |||+|.||.++++.|+++|++|++++|+..+..+...     +... ...++.++.+|+++. +.+..+++.     .++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-----KLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765321111     0000 124789999999997 777666542     279


Q ss_pred             cEEEecCCCC
Q 025908           74 DVVYDINGRE   83 (246)
Q Consensus        74 d~vi~~~~~~   83 (246)
                      |++||+||..
T Consensus        93 D~lv~nAg~~  102 (311)
T 3o26_A           93 DILVNNAGVA  102 (311)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            9999999964

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.43  E-value=5.9e-13  Score=104.71  Aligned_cols=142  Identities=15%  Similarity=0.089  Sum_probs=99.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh------hcCceEEEEccCCCHHHHHHhhhc---C
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSA---K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~---~   71 (246)
                      |||+|+||+++++.|+++|++|+++.|+...... ..    .....      ...++.++.+|++|.+++.+++++   .
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT-QG----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG-TH----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHH-HH----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            7999999999999999999999988886544211 10    00000      125788999999999999988874   2


Q ss_pred             CccEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           72 GFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        72 ~~d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      ++|++||++|....                    +..+++++    +.  +..++|++||...+...           ..
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------PF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------TT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------CC
Confidence            59999999986321                    12233343    32  56799999998764211           11


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCC
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~  158 (246)
                      ...| .+|..++.+.+       ..+++++.++|+.+..+.
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            2235 89999987653       368999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.41  E-value=1.1e-12  Score=99.89  Aligned_cols=193  Identities=15%  Similarity=0.088  Sum_probs=116.1

Q ss_pred             CCccccchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhh--cCceEEEEccCCCHHHHHHhhhcC----
Q 025908            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~----   71 (246)
                      |||+|.||+++++.|++   +|++|++++|+..+......     +....  ...+.++.+|++|++++.+++++.    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKE-----ELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH-----HHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHH-----HHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            79999999999999999   89999999998654211100     01110  246888999999999888777532    


Q ss_pred             ---Ccc--EEEecCCCCc---------cc--------------hHHHHH----hCC-C---CceEEEEeecceeccCCCC
Q 025908           72 ---GFD--VVYDINGREA---------DE--------------VEPILD----ALP-N---LEQFIYCSSAGVYLKSDLL  115 (246)
Q Consensus        72 ---~~d--~vi~~~~~~~---------~~--------------~~~l~~----a~~-~---~~~~i~~Ss~~v~~~~~~~  115 (246)
                         ++|  ++||++|...         ..              ...+++    .+. .   ..++|++||...+..    
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC----
Confidence               467  9999998631         11              112222    232 2   357999999877521    


Q ss_pred             CCCCCCCCCCCCcc-ccHHHHHHHHHh-----cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCC-cccCCCCCceee
Q 025908          116 PHCETDTVDPKSRH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQ  188 (246)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~e~~~~~-----~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  188 (246)
                             ..+...| .+|...+.+.+.     .+++++.+.|+.+-.+.     ...+.... .... ............
T Consensus       163 -------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~~-~~~~~~~~~~~~~p~~~  229 (259)
T 1oaa_A          163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM-----QQLARETS-KDPELRSKLQKLKSDGA  229 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH-----HHHHHHHC-SCHHHHHHHHHHHHTTC
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch-----HHHHhhcc-CChhHHHHHHHhhhcCC
Confidence                   1122345 899999887642     24888889998775541     11111000 0000 000000000123


Q ss_pred             eeeHHHHHHHHHHHhcCC-CCCCeeEEe
Q 025908          189 LGHVKDLARAFVQVLGNE-KASRQVFNI  215 (246)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~-~~~~~~~~~  215 (246)
                      +.+++|+|++++.++... ...|+.+++
T Consensus       230 ~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             cCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            567999999999988642 334555544

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.35  E-value=3.8e-12  Score=99.72  Aligned_cols=182  Identities=13%  Similarity=0.096  Sum_probs=111.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc-----ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----   70 (246)
                      |||+|.||+++++.|+++|++|++++|.....     ...... ...+...  .+. ...+|+.+.+++.+++++     
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~-~~~~l~~--~~~-~~~~D~~~~~~~~~~~~~~~~~~   90 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADK-VVEEIRR--RGG-KAVANYDSVEAGEKLVKTALDTF   90 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHH-HHHHHHH--TTC-EEEEECCCGGGHHHHHHHHHHHT
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHH-HHHHHHh--hCC-eEEEeCCCHHHHHHHHHHHHHHc
Confidence            79999999999999999999999986642210     000000 0000111  111 235799988766655432     


Q ss_pred             CCccEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecce-eccCCCCCCCCCCCC
Q 025908           71 KGFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTV  123 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~  123 (246)
                      .++|++||+||....                    +...++++    ++  +..++|++||... ++..           
T Consensus        91 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-----------  159 (319)
T 1gz6_A           91 GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------  159 (319)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----------
Confidence            269999999986421                    11122333    33  5679999999654 3211           


Q ss_pred             CCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                       +...| .+|...+.+.+       ..+++++.++|+.+ .+.. ....                  ......+++++|+
T Consensus       160 -~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-~~~~------------------~~~~~~~~~p~dv  218 (319)
T 1gz6_A          160 -GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-ETVM------------------PEDLVEALKPEYV  218 (319)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-GGGS------------------CHHHHHHSCGGGT
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-cccC------------------ChhhhccCCHHHH
Confidence             12335 89998887653       35899999999976 3210 0000                  0011234578999


Q ss_pred             HHHHHHHhcCC-CCCCeeEEeeCC
Q 025908          196 ARAFVQVLGNE-KASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~~-~~~~~~~~~~~~  218 (246)
                      |+++++++..+ ...|++|++.++
T Consensus       219 A~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          219 APLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHhCchhhcCCCEEEECCC
Confidence            99999998654 235778877654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.34  E-value=1.1e-11  Score=102.23  Aligned_cols=181  Identities=18%  Similarity=0.160  Sum_probs=120.3

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      |||+|.||.++++.|.++|+ +|+++.|+...... .. ....+.......+.++.+|++|.+++.+++++    ..+|+
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPG-AA-ELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHH-HH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 78888886433110 00 00112222345789999999999999998864    25899


Q ss_pred             EEecCCCC-cc--------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           76 VYDINGRE-AD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        76 vi~~~~~~-~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      |||++|.. ..                    ++.++.+++.  ...+||++||...+-...           ....| .+
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-----------g~~~YaAa  391 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-----------GQPGYAAA  391 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT-----------TCHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC-----------CcHHHHHH
Confidence            99999874 21                    2445666655  677999999976542111           12234 88


Q ss_pred             HHHHHHHH---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          132 KLNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       132 k~~~e~~~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      |...+.+.   +..|++++.+.|+.+.+++....  ......+.+.           ....+..++.++++..++..+.
T Consensus       392 Ka~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          392 NAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCC
Confidence            88887665   45799999999998877542111  0011111111           1345678999999999997654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.30  E-value=1.1e-13  Score=108.77  Aligned_cols=145  Identities=12%  Similarity=0.112  Sum_probs=93.6

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecCCCcc-ccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPI-AQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~   71 (246)
                      |||+||+|++++..|++.|+       +|+++++..... ...       ....+ ...+.++ +|+.+.+.+.++++  
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g-------~~~dl~~~~~~~~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEG-------VVMELEDCAFPLL-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH-------HHHHHHTTTCTTE-EEEEEESCHHHHTT--
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccc-------hhhhhhccccccc-CCeEeccChHHHhC--
Confidence            79999999999999999886       899988764210 000       00000 0112223 57666566777887  


Q ss_pred             CccEEEecCCCCc--------------cchHHHHHhCC--C-Cc-eEEEEeecc-eeccCCCCCCCCCC-CCCCCCcc-c
Q 025908           72 GFDVVYDINGREA--------------DEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHCETD-TVDPKSRH-K  130 (246)
Q Consensus        72 ~~d~vi~~~~~~~--------------~~~~~l~~a~~--~-~~-~~i~~Ss~~-v~~~~~~~~~~e~~-~~~~~~~~-~  130 (246)
                      ++|+|||+|+...              ..+.+++++++  + .+ +++++|+.. +....    ..+.. ...|...| .
T Consensus        80 ~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~----~~~~~~~~~p~~~yg~  155 (327)
T 1y7t_A           80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALI----AYKNAPGLNPRNFTAM  155 (327)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH----HHHTCTTSCGGGEEEC
T ss_pred             CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHH----HHHHcCCCChhheecc
Confidence            9999999998642              23667788766  3 44 777777643 11100    00111 23344445 8


Q ss_pred             cHHHHHHHH----HhcCCceEEeecceeeCCCC
Q 025908          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (246)
Q Consensus       131 ~k~~~e~~~----~~~~~~~~ilR~~~i~g~~~  159 (246)
                      +|...|+++    +..+++.+++|++++|||+.
T Consensus       156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999999865    34689999999999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.30  E-value=1.2e-10  Score=90.42  Aligned_cols=198  Identities=10%  Similarity=-0.035  Sum_probs=114.1

Q ss_pred             CCcc--ccchHHHHHHHHHCCCeEEEEecCC-----------CccccCCCCCCchhhhhhcCceEEEEcc--------C-
Q 025908            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQQLPGESDQEFAEFSSKILHLKGD--------R-   58 (246)
Q Consensus         1 ~Gat--G~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~~~D--------~-   58 (246)
                      |||+  |.||+++++.|+++|++|++++|++           .+... ......   .........+.+|        + 
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-SRVLPD---GSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-GGBCTT---SSBCCEEEEEEECTTCCSGGGSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-hhhhcc---ccccccccccccceeccchhhhh
Confidence            6998  9999999999999999999998642           11100 000000   0000002233333        2 


Q ss_pred             ---CC--------HHHHHHhhhc-----CCccEEEecCCCCc---c-------------------chHHHHHhCC----C
Q 025908           59 ---KD--------YDFVKSSLSA-----KGFDVVYDINGREA---D-------------------EVEPILDALP----N   96 (246)
Q Consensus        59 ---~~--------~~~~~~~~~~-----~~~d~vi~~~~~~~---~-------------------~~~~l~~a~~----~   96 (246)
                         +|        ++++.+++++     .++|++||+||...   .                   +...+++++.    .
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  169 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence               11        2334444332     26999999997521   0                   1223344432    2


Q ss_pred             CceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH--------hcCCceEEeecceeeCCCCCCc-hHHHH
Q 025908           97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNP-VEEWF  167 (246)
Q Consensus        97 ~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~--------~~~~~~~ilR~~~i~g~~~~~~-~~~~~  167 (246)
                      ..++|++||...+...         +.....|..+|...+.+.+        ..|++++.++|+.+.++..... ....+
T Consensus       170 ~g~iv~isS~~~~~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  240 (297)
T 1d7o_A          170 GGASISLTYIASERII---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             EEEEEEEECGGGTSCC---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             CceEEEEeccccccCC---------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHH
Confidence            3589999987664211         1000124489998887652        2689999999999999853321 12222


Q ss_pred             HHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      ........++         ..+.+++|+|++++.++...  ...|+.+++.++..
T Consensus       241 ~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          241 IEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            2222222221         12456899999999998642  34688999998853

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.19  E-value=4.9e-11  Score=99.29  Aligned_cols=201  Identities=15%  Similarity=0.082  Sum_probs=122.9

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEE-ecCCCccccC------CCC--CCchhhhhhcCceEEEEccCCCHHHHHHhhhc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIAQQ------LPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l-~r~~~~~~~~------~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   70 (246)
                      |||+|.||.++++.|.++|.+ |+++ .|+.......      ...  ....+.......+.++.+|++|.+++.+++++
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  336 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAG  336 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHT
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHH
Confidence            799999999999999999987 5555 6764320000      000  00112223345799999999999999999875


Q ss_pred             C----CccEEEecCCCCcc--------------------chHHHHHhCC------C-CceEEEEeecceeccCCCCCCCC
Q 025908           71 K----GFDVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCE  119 (246)
Q Consensus        71 ~----~~d~vi~~~~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e  119 (246)
                      .    .+|.|||++|....                    +..++.+++.      + ..+||++||...+-...      
T Consensus       337 i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~------  410 (525)
T 3qp9_A          337 VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA------  410 (525)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT------
T ss_pred             HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC------
Confidence            2    58999999997422                    2334444432      2 67999999977642211      


Q ss_pred             CCCCCCCCccccHHHHHHHHH---hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          120 TDTVDPKSRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       120 ~~~~~~~~~~~~k~~~e~~~~---~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                          ....|..+|..++.+.+   ..|++++.+.|+.+-++......   ....+...           ....+..++++
T Consensus       411 ----g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~---~~~~~~~~-----------g~~~l~pee~a  472 (525)
T 3qp9_A          411 ----GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGA---TGERLRRL-----------GLRPLAPATAL  472 (525)
T ss_dssp             ----TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSH---HHHHHHHT-----------TBCCBCHHHHH
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchh---hHHHHHhc-----------CCCCCCHHHHH
Confidence                11223388998887764   46899999999988222110111   11111111           12356789999


Q ss_pred             HHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHH
Q 025908          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~  231 (246)
                      +++..++..+..  .+. +.   .+.|..+...+.
T Consensus       473 ~~l~~~l~~~~~--~v~-v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          473 TALDTALGHGDT--AVT-IA---DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHHTCS--EEE-EC---CBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCC--eEE-EE---eCCHHHHHhhcc
Confidence            999999976542  222 22   245666655543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.17  E-value=4.5e-10  Score=88.42  Aligned_cols=142  Identities=7%  Similarity=-0.077  Sum_probs=88.6

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCC---------Ccc---ccCCCCCCchhhhhhcCceEEEEccCCCH--H--
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------API---AQQLPGESDQEFAEFSSKILHLKGDRKDY--D--   62 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~---------~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~--   62 (246)
                      |||++  .||.++++.|.++|++|++.+|++         .+.   ......     .......+.++.+|+.+.  +  
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIID-----KDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCS-----SSCBCCEEEEEECCTTCSSGGGC
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHh-----hcccccccccccccccccchhhh
Confidence            68764  899999999999999999877654         110   000000     000123477888888765  5  


Q ss_pred             ----------------HHHHhhhc-----CCccEEEecCCCCc--c--------------------chHHHHHh----CC
Q 025908           63 ----------------FVKSSLSA-----KGFDVVYDINGREA--D--------------------EVEPILDA----LP   95 (246)
Q Consensus        63 ----------------~~~~~~~~-----~~~d~vi~~~~~~~--~--------------------~~~~l~~a----~~   95 (246)
                                      ++.+++++     .++|++||+||...  .                    +...+.++    ++
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            55555543     26999999998521  0                    12223333    22


Q ss_pred             CCceEEEEeecceeccCCCCCCCCCCCCCCC-CccccHHHHHHHHH-------h-cCCceEEeecceeeCC
Q 025908           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGP  157 (246)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~  157 (246)
                      ...++|++||...+...          +... .|..+|...+.+.+       . .+++++.+.||.+..+
T Consensus       163 ~~g~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          163 PQSSIISLTYHASQKVV----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hCCeEEEEeCccccCCC----------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            22589999987753211          1111 34488988876542       4 6899999999988764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.08  E-value=2e-10  Score=97.50  Aligned_cols=205  Identities=13%  Similarity=0.057  Sum_probs=115.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCC-CCchhhhhh-cCceEEEEccCCCHHHHHHhhhcC-----Cc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~-----~~   73 (246)
                      |||+|.||+++++.|+++|++|++++|........... .......+. ..+.. +.+|+.+.+++.+++++.     ++
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~~~~~g~i  103 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETAIKAFGRV  103 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC---------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHHHHHCCCC
Confidence            79999999999999999999999998832211000000 000000011 11112 347999888777776532     69


Q ss_pred             cEEEecCCCCcc--------------------chHHHHHh----CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        74 d~vi~~~~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      |++||+||....                    +...++++    ++  +..++|++||...+...           ....
T Consensus       104 DiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~-----------~~~~  172 (613)
T 3oml_A          104 DILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN-----------FGQV  172 (613)
T ss_dssp             -CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC-----------TTCH
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-----------CCCh
Confidence            999999997422                    12223333    22  45799999997654211           1122


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      .| .+|...+.+.+       ..|++++.+.|+.+ .+..             ... .     .......+..+|+|+++
T Consensus       173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~-------------~~~-~-----~~~~~~~~~pedvA~~v  232 (613)
T 3oml_A          173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMT-------------EGI-L-----PDILFNELKPKLIAPVV  232 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCC-C-----CHHHHTTCCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhh-------------hhc-c-----chhhhhcCCHHHHHHHH
Confidence            34 89988887653       35899999999853 1100             000 0     00112234689999999


Q ss_pred             HHHhcCC-CCCCeeEEeeCCe--------------------eecHHHHHHHHHHHhCCC
Q 025908          200 VQVLGNE-KASRQVFNISGEK--------------------YVTFDGLARACAKVTGYC  237 (246)
Q Consensus       200 ~~~~~~~-~~~~~~~~~~~~~--------------------~~s~~~l~~~~~~~~g~~  237 (246)
                      +.++... ...|+++++.+|.                    ..+..++.+.+.+..+..
T Consensus       233 ~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~  291 (613)
T 3oml_A          233 AYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS  291 (613)
T ss_dssp             HHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred             HHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence            9988654 2367788876651                    245666777777766554

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.08  E-value=2.2e-09  Score=83.98  Aligned_cols=196  Identities=14%  Similarity=0.052  Sum_probs=110.8

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCCC-----------ccc--cCCCCCCchhhhhhcCceEEEEcc--------
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-----------PIA--QQLPGESDQEFAEFSSKILHLKGD--------   57 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~~-----------~~~--~~~~~~~~~~~~~~~~~v~~~~~D--------   57 (246)
                      |||  +|.||+++++.|+++|++|+++.|++.           +..  ..+..      ......+..+.+|        
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~   88 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD------GSLIEFAGVYPLDAAFDKPED   88 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTT------SCBCCCSCEEECCTTCSSTTS
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhc------cccccccccccccccccccch
Confidence            687  899999999999999999999987531           100  00100      0000012344443        


Q ss_pred             ----CCC--------HHHHHHhhhc-----CCccEEEecCCCCc---c-------------------chHHHHHhCC---
Q 025908           58 ----RKD--------YDFVKSSLSA-----KGFDVVYDINGREA---D-------------------EVEPILDALP---   95 (246)
Q Consensus        58 ----~~~--------~~~~~~~~~~-----~~~d~vi~~~~~~~---~-------------------~~~~l~~a~~---   95 (246)
                          ++|        .+++.+++++     .++|++||++|...   .                   +...+++++.   
T Consensus        89 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  168 (315)
T 2o2s_A           89 VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM  168 (315)
T ss_dssp             SCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred             hhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence                332        3344444432     26999999998531   0                   1223444432   


Q ss_pred             -CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH--------hcCCceEEeecceeeCCCC---C---
Q 025908           96 -NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLN---Y---  160 (246)
Q Consensus        96 -~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~--------~~~~~~~ilR~~~i~g~~~---~---  160 (246)
                       ...++|++||...+...         +.....|..+|...+.+.+        ..|++++.++||.+..+..   .   
T Consensus       169 ~~~g~Iv~isS~~~~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          169 NEGGSAVTLSYLAAERVV---------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             EEEEEEEEEEEGGGTSCC---------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             hcCCEEEEEecccccccC---------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence             22589999997764211         1011124488988877652        2689999999998866410   0   


Q ss_pred             -CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          161 -NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                       ..+...+........++         ..+..++|+|++++.++..  ....|+.+.+.++..
T Consensus       240 ~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          240 EKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             SSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence             00111111111111111         1245689999999999864  234688898988753

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.06  E-value=6.5e-10  Score=87.12  Aligned_cols=206  Identities=12%  Similarity=-0.011  Sum_probs=97.9

Q ss_pred             CCc--cccchHHHHHHHHHCCCeEEEEecCC-----------Ccccc--CCCC----CCchhhhhhc---CceEEEEccC
Q 025908            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQ--QLPG----ESDQEFAEFS---SKILHLKGDR   58 (246)
Q Consensus         1 ~Ga--tG~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~--~~~~----~~~~~~~~~~---~~v~~~~~D~   58 (246)
                      |||  +|.||+++++.|+++|++|++++|++           .+...  .+..    ....+.....   .....+.+|+
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   94 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA   94 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence            687  89999999999999999999998642           11000  0000    0000000000   0124444442


Q ss_pred             ------------CC--------HHHHHHhhhc-----CCccEEEecCCCCc---c-------------------chHHHH
Q 025908           59 ------------KD--------YDFVKSSLSA-----KGFDVVYDINGREA---D-------------------EVEPIL   91 (246)
Q Consensus        59 ------------~~--------~~~~~~~~~~-----~~~d~vi~~~~~~~---~-------------------~~~~l~   91 (246)
                                  ++        .+++.+++++     .++|++||++|...   .                   +...++
T Consensus        95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  174 (319)
T 2ptg_A           95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL  174 (319)
T ss_dssp             TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence                        22        2234444432     27999999987431   0                   122333


Q ss_pred             HhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHH-------h-cCCceEEeecceeeCCCC
Q 025908           92 DALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLN  159 (246)
Q Consensus        92 ~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~i~g~~~  159 (246)
                      +++.    ...++|++||...+...         +.....|..+|..++.+.+       . .+++++.++|+.+..+..
T Consensus       175 ~~~~~~m~~~g~Iv~isS~~~~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  245 (319)
T 2ptg_A          175 QHFLPLMKEGGSALALSYIASEKVI---------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA  245 (319)
T ss_dssp             HHHGGGEEEEEEEEEEEECC---------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC----
T ss_pred             HHHHHHHhcCceEEEEecccccccc---------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhh
Confidence            3322    23689999987764211         0000124478877776542       2 689999999999877631


Q ss_pred             CCchH---HHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          160 YNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       160 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      .....   ..+......     ..........+..++|+|++++.++..  ....|+.+.+.++..
T Consensus       246 ~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          246 SAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             --------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            11000   000000000     000000112356799999999999864  335688999988853

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.93  E-value=1.1e-08  Score=89.14  Aligned_cols=183  Identities=17%  Similarity=0.147  Sum_probs=116.5

Q ss_pred             CCccccchHHHHHHHH-HCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC----Ccc
Q 025908            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~-~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~----~~d   74 (246)
                      |||+|.||+++++.|. ++|. +|++++|+...... .. ....++......+.++.+|++|.+++.+++++.    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~-~~-~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG-AA-ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH-HH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            6999999999999999 7897 58899998433110 00 000112222457889999999999999888643    589


Q ss_pred             EEEecCCCC--------------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHH
Q 025908           75 VVYDINGRE--------------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (246)
Q Consensus        75 ~vi~~~~~~--------------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (246)
                      .|||+|+..                    ..+..++.+++. .. +||++||...+-...          ....|..+|.
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~----------g~~~YaAaka  682 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSG----------GQGNYAAANS  682 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCS----------SCHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCC----------CCHHHHHHHH
Confidence            999999873                    234566777765 45 899999977642211          1112337787


Q ss_pred             HHHHHH---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       134 ~~e~~~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      ..+.+.   +..|++++.+-||.+-+++............+.+.           ....+..++....+..++..+.
T Consensus       683 ~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~-----------g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          683 FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARS-----------GLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHT-----------TBCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHhCCC
Confidence            666554   45799999999998765431000001111111111           1234567888888888886543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.91  E-value=1.7e-08  Score=85.58  Aligned_cols=199  Identities=14%  Similarity=0.123  Sum_probs=123.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccC-CCHHHH-HHhhhc-CCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSA-KGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~-~~~~~~-~~~~~~-~~~d~vi   77 (246)
                      |||++-||+++++.|.++|++|++..|.....   .    ..+..+....+..+.+|+ .+.+.+ +++.+. .++|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~---~----~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK---T----VDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH---H----HHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH---H----HHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999999999987632110   0    011111123466677888 554433 333332 2699999


Q ss_pred             ecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        78 ~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      |+||....                    +    ++.++..+.  +..++|++||...+-..           .....| .
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-----------~~~~~Y~a  469 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-----------FGQANYSS  469 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----------TTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----------CCChhHHH
Confidence            99996421                    1    223333332  44689999987653110           112234 8


Q ss_pred             cHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|..+..+.       ...|++++.+.|+. -.+.     ......    ..          .......+|+|.++++++
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m-----~~~~~~----~~----------~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-----TLSIMR----EQ----------DKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-----ccccCc----hh----------hccCCCHHHHHHHHHHHh
Confidence            898887654       24689999999983 2221     110000    00          012346899999999988


Q ss_pred             cCCC-CCCeeEEeeCCe-----------------eecHHHHHHHHHHHhCCC
Q 025908          204 GNEK-ASRQVFNISGEK-----------------YVTFDGLARACAKVTGYC  237 (246)
Q Consensus       204 ~~~~-~~~~~~~~~~~~-----------------~~s~~~l~~~~~~~~g~~  237 (246)
                      .... ..|+++.+.++.                 .++..++.+.+.+.....
T Consensus       530 s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          530 TDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             STTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             CCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            5432 467888887762                 367889999999887764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.87  E-value=1.3e-09  Score=72.36  Aligned_cols=85  Identities=24%  Similarity=0.180  Sum_probs=67.1

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +|+ |++|+.+++.|.+.| ++|++++|++.+.....           ..++..+.+|+.+.+.+.++++  ++|+||++
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 99999999876532111           2577889999999999999997  99999999


Q ss_pred             CCCCccchHHHHHhCC--CCceEE
Q 025908           80 NGREADEVEPILDALP--NLEQFI  101 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~--~~~~~i  101 (246)
                      ++.  ....++++++.  +++++.
T Consensus        77 ~~~--~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           77 APF--FLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             SCG--GGHHHHHHHHHHTTCEEEC
T ss_pred             CCc--hhhHHHHHHHHHhCCCEEE
Confidence            964  34567777765  555544

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.80  E-value=1.5e-08  Score=91.38  Aligned_cols=187  Identities=12%  Similarity=0.086  Sum_probs=111.4

Q ss_pred             CCcccc-chHHHHHHHHHCCCeEEEEe-cCCCcccc---CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---C-
Q 025908            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K-   71 (246)
Q Consensus         1 ~GatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~-   71 (246)
                      |||+|. ||.++++.|+++|++|++++ |+......   .+..    +.......+.++.+|++|.+++.++++.   . 
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~a----el~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYA----KYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTT----TTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHH----HhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            799998 99999999999999999984 54433211   1110    0000124688899999998888877752   2 


Q ss_pred             -------CccEEEecCCCCccc-----------------------hHHHHHhC------C--CCceEEEEeecceeccCC
Q 025908           72 -------GFDVVYDINGREADE-----------------------VEPILDAL------P--NLEQFIYCSSAGVYLKSD  113 (246)
Q Consensus        72 -------~~d~vi~~~~~~~~~-----------------------~~~l~~a~------~--~~~~~i~~Ss~~v~~~~~  113 (246)
                             ++|++||+||.....                       ...+++++      .  +..++|++||......  
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--  635 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  635 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--
Confidence                   489999999863211                       11122222      2  2258999998654211  


Q ss_pred             CCCCCCCCCCCCCCccccHHHHHHHH-H----h--cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCce
Q 025908          114 LLPHCETDTVDPKSRHKGKLNTESVL-E----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (246)
Q Consensus       114 ~~~~~e~~~~~~~~~~~~k~~~e~~~-~----~--~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                ....|..+|..++.+. +    +  ..++++.+.||.+.+.......      .. .....   .  ...
T Consensus       636 ----------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~------e~-~~~~l---~--~ip  693 (1688)
T 2pff_A          636 ----------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN------NI-IAEGI---E--KMG  693 (1688)
T ss_dssp             ----------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT------TT-CSTTT---S--SSS
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc------hH-HHHHH---H--hCC
Confidence                      1223448999998873 2    1  1278888999988742211100      00 00000   0  011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC---CCCeeEEe
Q 025908          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNI  215 (246)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~  215 (246)
                      ..+.+.+|+|++++.++....   ..++.+.+
T Consensus       694 lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          694 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            123478999999999987641   23555555

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.75  E-value=4.1e-08  Score=79.07  Aligned_cols=82  Identities=6%  Similarity=-0.076  Sum_probs=58.6

Q ss_pred             CCccccchHH--HHHHHHHCCCeEEEEecCCCccccCCC-------CCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-
Q 025908            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (246)
Q Consensus         1 ~GatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-   70 (246)
                      |||++-||.+  +++.|.++|++|+++.|+.........       .............+..+.+|+++.+++.+++++ 
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            7999999999  999999999999999997655221110       000011112235688899999999888777653 


Q ss_pred             ----CCccEEEecCCC
Q 025908           71 ----KGFDVVYDINGR   82 (246)
Q Consensus        71 ----~~~d~vi~~~~~   82 (246)
                          .++|++||++|.
T Consensus       146 ~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                269999999886

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.71  E-value=5.4e-08  Score=77.95  Aligned_cols=82  Identities=12%  Similarity=-0.045  Sum_probs=58.5

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCCC-------CCchhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||++-||.++++.|.+ .|.+|+++.|+..........       .......+....+..+.+|+++++.++++++.  
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999986653211100       00011122234678899999998887776642  


Q ss_pred             ----CCccEEEecCCC
Q 025908           71 ----KGFDVVYDINGR   82 (246)
Q Consensus        71 ----~~~d~vi~~~~~   82 (246)
                          .++|++||++|.
T Consensus       147 ~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHSCSCEEEEEECCCC
T ss_pred             HHcCCCCCEEEEcCcc
Confidence                268999999875

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.69  E-value=3.7e-08  Score=91.26  Aligned_cols=188  Identities=12%  Similarity=0.048  Sum_probs=112.3

Q ss_pred             CCcccc-chHHHHHHHHHCCCeEEEEe-cCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---C----
Q 025908            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K----   71 (246)
Q Consensus         1 ~GatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~----   71 (246)
                      |||+|. ||.++++.|++.|++|++++ |+..+....... ...........+.++.+|++|.+++..+++.   .    
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~e-L~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHH-HHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 544332110000 0000000124688899999999888877752   1    


Q ss_pred             ----CccEEEecCCCCccc-----------------------hHHHHHhC---C-----CCceEEEEeecceeccCCCCC
Q 025908           72 ----GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (246)
Q Consensus        72 ----~~d~vi~~~~~~~~~-----------------------~~~l~~a~---~-----~~~~~i~~Ss~~v~~~~~~~~  116 (246)
                          ++|++||+||.....                       ...+++++   .     +..++|++||...+..     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence                489999999864221                       11122322   1     2358999998665311     


Q ss_pred             CCCCCCCCCCCccccHHHHHHH-HH----hc--CCceEEeecceeeC-CCCC-CchHHHHHHHHHhCCCcccCCCCCcee
Q 025908          117 HCETDTVDPKSRHKGKLNTESV-LE----SK--GVNWTSLRPVYIYG-PLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVT  187 (246)
Q Consensus       117 ~~e~~~~~~~~~~~~k~~~e~~-~~----~~--~~~~~ilR~~~i~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                             ....|..+|..++.+ .+    +.  .++++.+.||++.+ +... .......    ....+          .
T Consensus       835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~----~~~~p----------l  893 (1887)
T 2uv8_A          835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEG----IEKMG----------V  893 (1887)
T ss_dssp             -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHH----HHTTS----------C
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHH----HHhcC----------C
Confidence                   112344899988877 22    11  28899999999884 3110 0111111    11111          1


Q ss_pred             eeeeHHHHHHHHHHHhcCC---CCCCeeEEe
Q 025908          188 QLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (246)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~~  215 (246)
                      .+.+.+|+|++++.++...   ...+..+.+
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            2347999999999988653   124556665

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.67  E-value=1.1e-07  Score=88.08  Aligned_cols=189  Identities=10%  Similarity=0.035  Sum_probs=112.6

Q ss_pred             CCcccc-chHHHHHHHHHCCCeEEEEecC-CCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------C
Q 025908            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (246)
Q Consensus         1 ~GatG~-iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~   71 (246)
                      |||+|. ||.++++.|+++|++|++++++ .......... ...+.......+.++.+|++|.+++.++++.       .
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~e-L~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~  736 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQG-IYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL  736 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHH-HHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence            799998 9999999999999999998644 3321100000 0000000124688899999999988887753       2


Q ss_pred             --CccEEEecCCCCccc-----------------------hHHHHHh------CC--CCceEEEEeecceeccCCCCCCC
Q 025908           72 --GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHC  118 (246)
Q Consensus        72 --~~d~vi~~~~~~~~~-----------------------~~~l~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~  118 (246)
                        ++|+|||+||.....                       ...++.+      +.  +..+||++||...+..       
T Consensus       737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-------  809 (1878)
T 2uv9_A          737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-------  809 (1878)
T ss_dssp             CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-------
T ss_pred             CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-------
Confidence              589999999864221                       0112222      22  2358999998655311       


Q ss_pred             CCCCCCCCCccccHHHHHHHHH----h---cCCceEEeecceee-CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          119 ETDTVDPKSRHKGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       119 e~~~~~~~~~~~~k~~~e~~~~----~---~~~~~~ilR~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                           ....|..+|..++.+.+    +   ..++++.+.||++- .+.. .. . ..........++          .+.
T Consensus       810 -----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~-~~-~-~~~~~~~~~~pl----------r~~  871 (1878)
T 2uv9_A          810 -----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLM-SA-N-NLVAEGVEKLGV----------RTF  871 (1878)
T ss_dssp             -----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSC-SH-H-HHTHHHHHTTTC----------CCB
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccc-cc-c-hhhHHHHHhcCC----------CCC
Confidence                 11234489988877642    1   13889999999887 4321 11 1 111111111111          233


Q ss_pred             eHHHHHHHHHHHhcCCC---CCCeeEEe
Q 025908          191 HVKDLARAFVQVLGNEK---ASRQVFNI  215 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~~---~~~~~~~~  215 (246)
                      +.+|+|++++.++....   ..+..+.+
T Consensus       872 sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          872 SQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             CHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             CHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            78999999999885432   24566665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.64  E-value=2.5e-07  Score=78.38  Aligned_cols=201  Identities=12%  Similarity=0.075  Sum_probs=114.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-----cCCCCCCchhhhhhcCceEEEEccCCCHHHHH----Hhhhc-
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAEFSSKILHLKGDRKDYDFVK----SSLSA-   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~----~~~~~-   70 (246)
                      |||++-||+++++.|.++|++|++..|+.....     ..+.. ...+...  .+-. ..+|+.|.++++    ++.+. 
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~-~~~~i~~--~g~~-~~~d~~d~~~~~~~v~~~~~~~   89 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADV-VVDEIVK--NGGV-AVADYNNVLDGDKIVETAVKNF   89 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHH-HHHHHHH--TTCE-EEEECCCTTCHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHH-HHHHHHh--cCCe-EEEEcCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999887642100     00000 0001111  1111 224666543332    33322 


Q ss_pred             CCccEEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           71 KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      .++|++||+||....                    +    ++.++..++  +..++|++||...+-...          .
T Consensus        90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~----------~  159 (604)
T 2et6_A           90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF----------G  159 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------T
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------C
Confidence            269999999996321                    1    222333333  446899999876531110          1


Q ss_pred             CCCccccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          125 PKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       125 ~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      ...|..+|..+..+.+       ..|++++.+.|+. ..     .    +...   ....       ........+|+|.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T-----~----m~~~---~~~~-------~~~~~~~pe~vA~  219 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RS-----R----MTES---IMPP-------PMLEKLGPEKVAP  219 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CC-----H----HHHT---TSCH-------HHHTTCSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cC-----c----cccc---cCCh-------hhhccCCHHHHHH
Confidence            1123388988876543       4689999999962 11     1    1100   0000       0112246899999


Q ss_pred             HHHHHhcCC-CCCCeeEEeeCCe------------------eecHHHHHHHHHHHhC
Q 025908          198 AFVQVLGNE-KASRQVFNISGEK------------------YVTFDGLARACAKVTG  235 (246)
Q Consensus       198 ~~~~~~~~~-~~~~~~~~~~~~~------------------~~s~~~l~~~~~~~~g  235 (246)
                      +++.++... ...|+++.+.++.                  ..+..++.+.+.+...
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            999998653 3357788777652                  2466788888877654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.57  E-value=4.7e-07  Score=71.95  Aligned_cols=82  Identities=11%  Similarity=-0.038  Sum_probs=58.8

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCC-------CCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||++-||.++++.|.+ .|.+|.++.|+.........       ........+....+..+.+|+++++++.+++++  
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999 99999999987655221100       000011122234678899999999888777753  


Q ss_pred             ---CCccEEEecCCC
Q 025908           71 ---KGFDVVYDINGR   82 (246)
Q Consensus        71 ---~~~d~vi~~~~~   82 (246)
                         .++|++||++|.
T Consensus       133 ~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          133 QDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEEcCcc
Confidence               269999999875

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.46  E-value=2.8e-07  Score=63.11  Aligned_cols=90  Identities=13%  Similarity=0.110  Sum_probs=63.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~   79 (246)
                      +|+ |.+|+.+++.|.+.|++|++++|++.+.. .+.          ..+...+.+|..+.+.+.++ +.  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 99999999999999999999998765522 222          13456788999998888765 55  89999999


Q ss_pred             CCCCccchHHHHHhCC--CCceEEEEe
Q 025908           80 NGREADEVEPILDALP--NLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~--~~~~~i~~S  104 (246)
                      ++........+...++  +.++++..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~  104 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKA  104 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEe
Confidence            8764222223444443  555666544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.20  E-value=1.3e-06  Score=59.80  Aligned_cols=67  Identities=24%  Similarity=0.238  Sum_probs=53.0

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+ |.+|+++++.|.+.|++|+++.+++...... .          ..++.++.+|.++++.+.++- -.++|+||.+.+
T Consensus        13 G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~-~----------~~~~~~~~gd~~~~~~l~~~~-~~~~d~vi~~~~   79 (141)
T 3llv_A           13 GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELL-E----------DEGFDAVIADPTDESFYRSLD-LEGVSAVLITGS   79 (141)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-H----------HTTCEEEECCTTCHHHHHHSC-CTTCSEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-H----------HCCCcEEECCCCCHHHHHhCC-cccCCEEEEecC
Confidence            54 9999999999999999999999986552111 1          256888999999999888762 138999998887

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.19  E-value=1.2e-06  Score=67.49  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=57.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|.+|+++++.|.+.|.+|+++.|+..+..+...     +... ..++.++.+|+++.+++.++++  .+|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD-----SVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH-----HHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            6999999999999999999999999997654211110     0000 1246778899999999999997  799999999


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.15  E-value=2.6e-06  Score=82.59  Aligned_cols=143  Identities=18%  Similarity=0.161  Sum_probs=92.5

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      |||+|-||.++++.|.++|.+ |++++|+..+......  ...++......+.++.+|++|.+++.+++++    ..+|+
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~--~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR--QVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH--HHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH--HHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999986 7778887654210000  0011111234678889999999888877753    26999


Q ss_pred             EEecCCCCcc--------------------chHHHHH----hCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcccc
Q 025908           76 VYDINGREAD--------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (246)
                      |||+||....                    ++.++.+    .+....+||++||....-..          .....|..+
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~----------~g~~~Y~aa 2037 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN----------AGQANYGFA 2037 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC----------TTCHHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC----------CCcHHHHHH
Confidence            9999986321                    2333322    33345799999997653211          111223488


Q ss_pred             HHHHHHHHH---hcCCceEEeecceee
Q 025908          132 KLNTESVLE---SKGVNWTSLRPVYIY  155 (246)
Q Consensus       132 k~~~e~~~~---~~~~~~~ilR~~~i~  155 (246)
                      |...+.+.+   ..|++...+..+.+-
T Consensus      2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence            999887764   567877777766543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.13  E-value=4e-06  Score=68.54  Aligned_cols=71  Identities=17%  Similarity=0.192  Sum_probs=55.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +| +|++|+++++.|.+.|++|++.+|+..+.......         ..++..+.+|+.+.+++.++++  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 79999999999999999999999986553222111         1347788999999999999997  899999999


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        77 ~~~   79 (450)
T 1ff9_A           77 PYT   79 (450)
T ss_dssp             C--
T ss_pred             ccc
Confidence            863

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.03  E-value=3.6e-06  Score=57.21  Aligned_cols=88  Identities=17%  Similarity=0.204  Sum_probs=59.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~   79 (246)
                      +|+ |.+|..+++.|.+.|++|++++|++..... +.         ...++..+.+|..+.+.+.++ ++  ++|+||.+
T Consensus        10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~-~~---------~~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   76 (140)
T 1lss_A           10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-AS---------AEIDALVINGDCTKIKTLEDAGIE--DADMYIAV   76 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH---------HHCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HH---------HhcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence            355 999999999999999999999987654211 10         012677788999888877654 54  89999999


Q ss_pred             CCCCccchHHHHHhCC--CCceEEE
Q 025908           80 NGREADEVEPILDALP--NLEQFIY  102 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~--~~~~~i~  102 (246)
                      .+... ....+...++  +..++|.
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~ii~  100 (140)
T 1lss_A           77 TGKEE-VNLMSSLLAKSYGINKTIA  100 (140)
T ss_dssp             CSCHH-HHHHHHHHHHHTTCCCEEE
T ss_pred             eCCch-HHHHHHHHHHHcCCCEEEE
Confidence            76431 1122333333  4456664

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.95  E-value=1.1e-05  Score=55.83  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=53.7

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~   80 (246)
                      | .|.+|+.+++.|.+.|++|+++.+++....+.+.       .....++.++.+|.++++.+.++ ++  ++|+||.+.
T Consensus        10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (153)
T 1id1_A           10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS   79 (153)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence            5 4999999999999999999999997421110000       00125789999999999998876 76  899999887


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus        80 ~~   81 (153)
T 1id1_A           80 DN   81 (153)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.89  E-value=2.8e-06  Score=68.58  Aligned_cols=94  Identities=12%  Similarity=0.060  Sum_probs=66.0

Q ss_pred             CCccccchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +|| |++|+.+++.|.+.|   .+|.+.+|+..+......     .... ...++..+.+|+++.+++.+++++.++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~-----~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ-----SIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH-----HHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH-----HhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            577 999999999999998   389999998766321110     0000 013588899999999999999985459999


Q ss_pred             EecCCCCccchHHHHHhCC-CCceEEE
Q 025908           77 YDINGREADEVEPILDALP-NLEQFIY  102 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~-~~~~~i~  102 (246)
                      ||+++...  ...++++|. ..++++-
T Consensus        81 in~ag~~~--~~~v~~a~l~~g~~vvD  105 (405)
T 4ina_A           81 LNIALPYQ--DLTIMEACLRTGVPYLD  105 (405)
T ss_dssp             EECSCGGG--HHHHHHHHHHHTCCEEE
T ss_pred             EECCCccc--ChHHHHHHHHhCCCEEE
Confidence            99998642  345666654 2334443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.87  E-value=2e-05  Score=61.61  Aligned_cols=94  Identities=16%  Similarity=0.226  Sum_probs=60.7

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      |||+|++|..++..|+..|  ++|+++++++.... ..+..        ......+ .+ +.+.+++.++++  ++|+||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~--------~~~~~~v-~~-~~~t~d~~~al~--gaDvVi   81 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISH--------MDTGAVV-RG-FLGQQQLEAALT--GMDLII   81 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHT--------SCSSCEE-EE-EESHHHHHHHHT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhc--------ccccceE-EE-EeCCCCHHHHcC--CCCEEE
Confidence            5899999999999999988  78999887654100 00000        0011111 11 234566778887  999999


Q ss_pred             ecCCCCc--------------cchHHHHHhCC--CCceEEEEeec
Q 025908           78 DINGREA--------------DEVEPILDALP--NLEQFIYCSSA  106 (246)
Q Consensus        78 ~~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~  106 (246)
                      |+++...              ..++++++++.  ..+.+++++|-
T Consensus        82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            9998643              23556666655  56677877763

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.85  E-value=1.1e-05  Score=64.18  Aligned_cols=86  Identities=15%  Similarity=0.089  Sum_probs=63.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|| |++|+.+++.|.+ .++|.+.+|+..+...            ....+..+..|..|.+++.++++  ++|+||+++
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~------------~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK------------VKEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH------------HTTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH------------HhccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            477 9999999998854 5899998887655321            12456778899999999999998  999999998


Q ss_pred             CCCccchHHHHHhCC-CCceEEEEe
Q 025908           81 GREADEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      +..  ....++++|- ..++++-+|
T Consensus        86 p~~--~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred             CCc--ccchHHHHHHhcCcceEeee
Confidence            764  2345666655 334666554

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.84  E-value=6.6e-05  Score=52.03  Aligned_cols=68  Identities=18%  Similarity=0.387  Sum_probs=52.9

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~   80 (246)
                      | .|.+|..+++.|.+.|++|+++.|++.+... +..         ..++..+.+|..+.+.+.++ ++  ++|+||.+.
T Consensus        26 G-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~-~~~---------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~   92 (155)
T 2g1u_A           26 G-CGRLGSLIANLASSSGHSVVVVDKNEYAFHR-LNS---------EFSGFTVVGDAAEFETLKECGME--KADMVFAFT   92 (155)
T ss_dssp             C-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGG-SCT---------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHh---------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEe
Confidence            5 5999999999999999999999998776432 220         14567788898888777765 55  899999988


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus        93 ~~   94 (155)
T 2g1u_A           93 ND   94 (155)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.79  E-value=1.5e-05  Score=65.28  Aligned_cols=70  Identities=20%  Similarity=0.138  Sum_probs=55.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +|+ |.+|+++++.|.+. +++|++++|+.++......          ..++..+.+|+.+.+++.++++  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~----------~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK----------PSGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG----------GGTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH----------hcCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 7899999998665321110          1356777899999989999998  99999999


Q ss_pred             CCCC
Q 025908           80 NGRE   83 (246)
Q Consensus        80 ~~~~   83 (246)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8753

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.67  E-value=0.00014  Score=53.53  Aligned_cols=66  Identities=14%  Similarity=0.188  Sum_probs=45.4

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--CCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi~~~~   81 (246)
                      ||.+|.++++.|.++|++|+.+.|..... ...           ..++..+  |+...+++.+.+..  .++|++|++|+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~-----------~~~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAA   93 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALK-PEP-----------HPNLSIR--EITNTKDLLIEMQERVQDYQVLIHSMA   93 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCC-----------CTTEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSB
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccC-----------CCCeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCc
Confidence            89999999999999999999999976431 110           1355554  44454444333321  27999999998


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus        94 vs   95 (232)
T 2gk4_A           94 VS   95 (232)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.65  E-value=2.1e-05  Score=57.87  Aligned_cols=69  Identities=19%  Similarity=0.303  Sum_probs=54.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~   80 (246)
                      |+ |.+|+++++.|.+.|++|+++.+++.......          ...++.++.+|.++++.+.++ ++  ++|+||-+.
T Consensus         7 G~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~----------~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 GG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFA----------KKLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             CC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----------HHSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----------HHcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            54 99999999999999999999999876532110          024688999999999988876 55  899999777


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.63  E-value=4.2e-05  Score=52.08  Aligned_cols=68  Identities=10%  Similarity=0.164  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~   81 (246)
                      |.|.+|..+++.|.+.|++|+++.+++..... +.          ..++.++.+|.++++.+.++ ++  ++|.||-+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~~----------~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDE-LR----------ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HH----------HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH----------HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            35999999999999999999999998766321 11          25788999999999888765 44  8999998776


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            43

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.63  E-value=7.9e-06  Score=64.05  Aligned_cols=94  Identities=10%  Similarity=0.012  Sum_probs=58.3

Q ss_pred             CCccccchHHHHHHHHHCCC-------eEEEEecC----CCccccCCCCCCchhhhhhcCc-eEEEEccCCCHHHHHHhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-------~V~~l~r~----~~~~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~~~~~~   68 (246)
                      |||+|++|.+++..|+..+.       +|+++++.    ..+.....        ..+... ..+ ..|+....++.+++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~--------~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVM--------MEIDDCAFPL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHH--------HHHHTTTCTT-EEEEEEESSHHHHT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhH--------HHHhhhcccc-cCcEEEecCcHHHh
Confidence            79999999999999998875       78888776    22210000        000011 011 13444445567788


Q ss_pred             hcCCccEEEecCCCCcc--------------chHHHHHhCC--C-Cc-eEEEEee
Q 025908           69 SAKGFDVVYDINGREAD--------------EVEPILDALP--N-LE-QFIYCSS  105 (246)
Q Consensus        69 ~~~~~d~vi~~~~~~~~--------------~~~~l~~a~~--~-~~-~~i~~Ss  105 (246)
                      +  ++|+|||+++....              .++++++++.  . .+ +||++|.
T Consensus        82 ~--~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 K--DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             T--TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C--CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            7  99999999986432              2445666654  2 33 7888875

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.49  E-value=0.00018  Score=52.74  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=45.9

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--CCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--~~~d~vi~~~~   81 (246)
                      ||.+|.++++.|.++|++|+++.|...- .  .           ..++.  ..|+.+.+++.+.+.+  .++|++|++|+
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~-----------~~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--T-----------PPFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--C-----------CTTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc-c--c-----------CCCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999999886521 1  1           12333  4577776665544421  26999999998


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.49  E-value=4.6e-05  Score=54.39  Aligned_cols=67  Identities=19%  Similarity=0.065  Sum_probs=53.1

Q ss_pred             ccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh--hhcCCccEEEec
Q 025908            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (246)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~--~~~~~~d~vi~~   79 (246)
                      |.|.+|..+++.|.+. |++|+++.|++.+... +.          ..++..+.+|.++.+.+.++  ++  ++|+||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~----------~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQ-HR----------SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HH----------HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HH----------HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            3599999999999999 9999999998765321 11          24678889999998888776  65  89999987


Q ss_pred             CCC
Q 025908           80 NGR   82 (246)
Q Consensus        80 ~~~   82 (246)
                      .+.
T Consensus       113 ~~~  115 (183)
T 3c85_A          113 MPH  115 (183)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.41  E-value=1.1e-05  Score=62.58  Aligned_cols=95  Identities=15%  Similarity=0.155  Sum_probs=55.2

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEec--CCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      |||+|++|..++..|+..+.  ++..+++  ...+... ...+..... ....++.+.. +  +    .++++  ++|+|
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-~~~dl~~~~-~~~~~~~v~~-~--~----~~a~~--~aDvV   74 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVG-QAADTNHGI-AYDSNTRVRQ-G--G----YEDTA--GSDVV   74 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHH-HHHHHHHHH-TTTCCCEEEE-C--C----GGGGT--TCSEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHH-HHHHHHHHH-hhCCCcEEEe-C--C----HHHhC--CCCEE
Confidence            68999999999999998875  5777766  3322100 000000000 0112333332 1  2    34566  99999


Q ss_pred             EecCCCCcc--------------chHHHHHhCC--CCceEEEEeec
Q 025908           77 YDINGREAD--------------EVEPILDALP--NLEQFIYCSSA  106 (246)
Q Consensus        77 i~~~~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~  106 (246)
                      ||+++....              .++++++++.  ..+.+++++|-
T Consensus        75 i~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999986432              3556666655  55777777763

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.41  E-value=0.0001  Score=53.21  Aligned_cols=93  Identities=16%  Similarity=0.131  Sum_probs=59.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH---HHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+... ..          ..+... ..|..+.+   .+.+.....++|++|
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~~----------~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LS----------RLGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH----------TTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----------HcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            6899999999999999999999999987654211 11          012222 23555433   333333333699999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ++++.  ......++.++...+++.+++..
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence            99873  34455666666445888777543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.36  E-value=1.3e-05  Score=62.47  Aligned_cols=98  Identities=16%  Similarity=0.096  Sum_probs=57.0

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEec--CCCccccCCCCCCchhhhhhc-CceEEEEccCCCHHHHHHhhhcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~d~   75 (246)
                      |||+|++|++++..|+..+.  ++..+++  +..+....... . ....... ..+.+...+    +++.++++  ++|+
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~d-l-~~~~~~~~~~~~i~~~~----d~l~~al~--gaD~   77 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRED-I-YDALAGTRSDANIYVES----DENLRIID--ESDV   77 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHH-H-HHHHTTSCCCCEEEEEE----TTCGGGGT--TCSE
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHH-H-HHhHHhcCCCeEEEeCC----cchHHHhC--CCCE
Confidence            69999999999999998874  5777776  32211000000 0 0000000 122322211    23456777  9999


Q ss_pred             EEecCCCCc--------------cchHHHHHhCC--CCceEEEEeecc
Q 025908           76 VYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAG  107 (246)
Q Consensus        76 vi~~~~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~  107 (246)
                      |||+++...              ..+++++++++  . +++++++|--
T Consensus        78 Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP  124 (313)
T 1hye_A           78 VIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP  124 (313)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS
T ss_pred             EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc
Confidence            999998642              23566777765  6 7888888743

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.19  E-value=0.00022  Score=56.76  Aligned_cols=92  Identities=12%  Similarity=0.088  Sum_probs=62.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |.+|..+++.|...|.+|++++|++.+.... .        + ..+.. +.+|..+.+++.++++  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~-~--------~-~~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL-D--------D-VFGGR-VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H--------H-HTTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-H--------H-hcCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 9999999999999999999999986552110 0        0 01112 4456677888888887  899999998


Q ss_pred             CCCcc-----chHHHHHhCCCCceEEEEeec
Q 025908           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +....     -....++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            85421     145667777744578877753

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.16  E-value=0.0015  Score=51.79  Aligned_cols=83  Identities=12%  Similarity=0.033  Sum_probs=59.9

Q ss_pred             CCccccchHHHHHHHH-HCCCeEEEEecCCCccccCCCC-------CCchhhhhhcCceEEEEccCCCHHHHHHhhhc--
Q 025908            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--   70 (246)
                      |||++-+|.+.+..|. +.|..++++.+......+....       .......+.......+.||+.+++.+++++++  
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            6999999999999887 6799999999876653222110       00112223346788899999998888877754  


Q ss_pred             ---CCccEEEecCCCC
Q 025908           71 ---KGFDVVYDINGRE   83 (246)
Q Consensus        71 ---~~~d~vi~~~~~~   83 (246)
                         .++|+++|.++..
T Consensus       136 ~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          136 KKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HTTCCEEEEEECCCCS
T ss_pred             HhcCCCCEEEEecccc
Confidence               2799999998853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.14  E-value=0.0011  Score=52.00  Aligned_cols=91  Identities=19%  Similarity=0.169  Sum_probs=59.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|+..+... +        .+  .+... ..|..+.   +.+.+.....++|++|
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~--------~~--~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET-A--------RK--LGCHH-TINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--HTCSE-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCCE-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            6899999999999999999999999998654211 1        01  11221 2355443   3344444334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  455666777664347776653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.11  E-value=0.00073  Score=52.80  Aligned_cols=91  Identities=16%  Similarity=0.134  Sum_probs=59.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH---HHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+... +        .+  .+... ..|..+.+   .+.+.....++|++|
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~-~--------~~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-A--------LK--AGAWQ-VINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H--------HH--HTCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--cCCCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence            6899999999999999999999999987654211 1        01  12221 23554433   333333334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++|  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9998  4455666777764457777664

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.05  E-value=0.00039  Score=51.58  Aligned_cols=65  Identities=14%  Similarity=-0.039  Sum_probs=51.9

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~   80 (246)
                      |+ |.+|+.+++.|.+.|+ |+++.+++.....          .  ..++.++.+|.++++.+.++ ++  ++|.||.+.
T Consensus        16 G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~----------~--~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (234)
T 2aef_A           16 GW-SESTLECLRELRGSEV-FVLAEDENVRKKV----------L--RSGANFVHGDPTRVSDLEKANVR--GARAVIVDL   79 (234)
T ss_dssp             SC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH----------H--HTTCEEEESCTTCHHHHHHTTCT--TCSEEEECC
T ss_pred             CC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH----------H--hcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcC
Confidence            54 9999999999999999 9999887655211          0  14688999999999988877 66  899999877


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus        80 ~~   81 (234)
T 2aef_A           80 ES   81 (234)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.04  E-value=0.0003  Score=69.13  Aligned_cols=81  Identities=11%  Similarity=0.064  Sum_probs=57.1

Q ss_pred             CCcccc-chHHHHHHHHHCCCeEEEEecCCCccccC-CCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--------
Q 025908            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (246)
Q Consensus         1 ~GatG~-iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------   70 (246)
                      |||++. ||.++++.|++.|.+|++.+|+....... +.. ...+.......+..+.+|+++.+++.++++.        
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~-l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~ 2220 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQ-LYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTES 2220 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHH-HHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHH-HHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhh
Confidence            799988 99999999999999999999987651000 000 0000011124577899999999888877542        


Q ss_pred             -CCccEEEecCCC
Q 025908           71 -KGFDVVYDINGR   82 (246)
Q Consensus        71 -~~~d~vi~~~~~   82 (246)
                       .++|++||+||.
T Consensus      2221 fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2221 LGPQSIHLKDAQT 2233 (3089)
T ss_dssp             ESSSEEEECCCCC
T ss_pred             cCCCCEEEECCCc
Confidence             258999999986

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.77  E-value=0.0032  Score=49.49  Aligned_cols=91  Identities=16%  Similarity=0.080  Sum_probs=60.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+... ..        +  .+... ..|..+.   +.+.++....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~--------~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR-AK--------A--LGADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HH--------H--HTCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------h--cCCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            6899999999999999999999999987655211 10        1  12222 1355443   2333333334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++  .......++.++...+++.+++
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~  266 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGA  266 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEec
Confidence            9998  3556677777774447777664

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.66  E-value=0.003  Score=49.92  Aligned_cols=91  Identities=11%  Similarity=0.046  Sum_probs=58.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+... ..        +  .+.. ...|..+.   +.+.+.....++|++|
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~--------~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AE--------K--LGAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH--------H--HTCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            6899999999999999999999999987655211 11        1  1222 12344443   3333333334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++|..  .....++.++...+++.++.
T Consensus       237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGGS--YWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCch--HHHHHHHhccCCCEEEEEec
Confidence            999863  45556666664457776653

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.65  E-value=0.0054  Score=42.39  Aligned_cols=78  Identities=15%  Similarity=0.107  Sum_probs=51.9

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH--HHHHHhhhc----CCccEEE
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~~----~~~d~vi   77 (246)
                      +|.++.+.++.|.+.|.+|++..|...... ..+. ......+....+..+.+|++++  +.+.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~-~~~~-~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKD-AHPD-EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTT-SCTT-HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccccc-cccc-HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            578999999999999999998877654421 1110 0111122234566778899887  777766642    2349999


Q ss_pred             ecCCCC
Q 025908           78 DINGRE   83 (246)
Q Consensus        78 ~~~~~~   83 (246)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.64  E-value=0.00056  Score=53.98  Aligned_cols=91  Identities=13%  Similarity=0.005  Sum_probs=55.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHH----HHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF----VKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~----~~~~~~~~~~d~v   76 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ...          ..+... ..|+.+.++    +.++... ++|+|
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~----------~~g~~~-~~d~~~~~~~~~~~~~~~~~-~~D~v  242 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFR----------SIGGEV-FIDFTKEKDIVGAVLKATDG-GAHGV  242 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHH----------HTTCCE-EEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHH----------HcCCce-EEecCccHhHHHHHHHHhCC-CCCEE
Confidence            589999999999999999999999998876531 111          112222 236553222    3333333 79999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |++++.. ......++.++...+++.+++
T Consensus       243 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          243 INVSVSE-AAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             EECSSCH-HHHHHHTTSEEEEEEEEECCC
T ss_pred             EECCCcH-HHHHHHHHHHhcCCEEEEEeC
Confidence            9998742 122333343443347776664

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.59  E-value=0.0026  Score=50.46  Aligned_cols=92  Identities=22%  Similarity=0.151  Sum_probs=58.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|+++++++.+... +.          ..+...+ .|..+.   +.+.+.. ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~----------~~Ga~~~-~~~~~~~~~~~~~~~~-~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF-LK----------SLGCDRP-INYKTEPVGTVLKQEY-PEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----------HTTCSEE-EETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HH----------HcCCcEE-EecCChhHHHHHHHhc-CCCCCEEE
Confidence            5899999999999999999999999987655211 10          1122211 233321   2222222 24799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ++++.  ......++.++...+++.+++..
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence            99985  34555667666445788777543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.58  E-value=0.0011  Score=53.43  Aligned_cols=67  Identities=18%  Similarity=0.264  Sum_probs=54.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~   81 (246)
                      |-|.+|+.+++.|.+.|++|+++.+++...... .          ..++.++.+|.++++.+.++ ++  ++++||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-~----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-R----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-H----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-H----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            348999999999999999999999987763211 1          25788999999999998877 55  8999987765


Q ss_pred             C
Q 025908           82 R   82 (246)
Q Consensus        82 ~   82 (246)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.58  E-value=0.0034  Score=49.13  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|+++++++.+.. ...          ..+... ..|..+   .+.+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~----------~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAK----------EYGAEY-LINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HcCCcE-EEeCCCchHHHHHHHHhCCCCceEEE
Confidence            588999999999999999999999999765531 111          112221 123333   33444444445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99985  455666777774457776653

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.55  E-value=0.0028  Score=49.82  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      +||+|.+|...++.+...|.+|+++++++.+.. ..        .++ ....++..+ .+ .+.+.++....++|+||++
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~~-ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FV--------KSV-GADIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HH--------HHH-TCSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------Hhc-CCcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            589999999999999999999999999776631 11        111 112223233 22 2334444443479999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEee
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +|..  .....++.++...+++.++.
T Consensus       235 ~g~~--~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          235 IGGP--AFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             CC----CHHHHHHTEEEEEEEEEC--
T ss_pred             Cchh--HHHHHHHhhcCCCEEEEEEc
Confidence            9863  45566666664457776653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.53  E-value=0.00065  Score=53.25  Aligned_cols=91  Identities=15%  Similarity=0.251  Sum_probs=55.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh---cCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|+..+.... .          ..+.. ...|..+.+++.+.+.   ..++|++|
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~----------~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K----------QIGFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H----------HTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----------hcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            58999999999999999999999999876542111 1          11222 1236554222222222   13799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++|..  .....++.++...+++.++.
T Consensus       220 ~~~g~~--~~~~~~~~l~~~G~~v~~g~  245 (333)
T 1v3u_A          220 DNVGGE--FLNTVLSQMKDFGKIAICGA  245 (333)
T ss_dssp             ESSCHH--HHHHHHTTEEEEEEEEECCC
T ss_pred             ECCChH--HHHHHHHHHhcCCEEEEEec
Confidence            999842  23444444443347776664

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.53  E-value=0.0032  Score=49.09  Aligned_cols=91  Identities=15%  Similarity=0.093  Sum_probs=58.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... ..        ++ ....++  |..+   .+.+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~--------~~-Ga~~~~--~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH-AK--------AL-GAWETI--DYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH--------HH-TCSEEE--ETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------Hc-CCCEEE--eCCCccHHHHHHHHhCCCCceEEE
Confidence            5899999999999999999999999987665211 10        11 111222  3333   23444444434799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  344555565554457776653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.41  E-value=0.00088  Score=52.73  Aligned_cols=91  Identities=13%  Similarity=0.165  Sum_probs=56.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH----HHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~~~~~~~~~~~d~v   76 (246)
                      +||+|.+|..+++.+...|.+|++++|+..+......          ..+... ..|..+.    +.+.+.. ..++|+|
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----------~~g~~~-~~d~~~~~~~~~~~~~~~-~~~~d~v  229 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT----------KFGFDD-AFNYKEESDLTAALKRCF-PNGIDIY  229 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----------TSCCSE-EEETTSCSCSHHHHHHHC-TTCEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCce-EEecCCHHHHHHHHHHHh-CCCCcEE
Confidence            6899999999999999999999999987655211100          012221 1254432    2333332 2479999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |++++.  ......++.++...+++.++.
T Consensus       230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~  256 (345)
T 2j3h_A          230 FENVGG--KMLDAVLVNMNMHGRIAVCGM  256 (345)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred             EECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence            999974  234445555553347776654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.31  E-value=0.00026  Score=51.66  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=47.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|.+|+.+++.|.+.|++|++++|++.+... +..    .......     ..|+. .+++.++++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~-----~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KAA----EYRRIAG-----DASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HHH----HHHHHHS-----SCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----Hhccccc-----cCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            4789999999999999999999999997654211 100    0000000     01111 123445566  899999998


Q ss_pred             CCCccchHHHHHhC
Q 025908           81 GREADEVEPILDAL   94 (246)
Q Consensus        81 ~~~~~~~~~l~~a~   94 (246)
                      ..  .....+++.+
T Consensus        73 ~~--~~~~~~~~~l   84 (212)
T 1jay_A           73 PW--EHAIDTARDL   84 (212)
T ss_dssp             CH--HHHHHHHHHT
T ss_pred             Ch--hhHHHHHHHH
Confidence            63  2344454433

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.30  E-value=0.0034  Score=48.42  Aligned_cols=88  Identities=15%  Similarity=0.127  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... ..          ..+...+ .|..+.+++.+.+.  ++|+||+ +
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~----------~~ga~~~-~~~~~~~~~~~~~~--~~d~vid-~  196 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PL----------ALGAEEA-ATYAEVPERAKAWG--GLDLVLE-V  196 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HH----------HTTCSEE-EEGGGHHHHHHHTT--SEEEEEE-C
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------hcCCCEE-EECCcchhHHHHhc--CceEEEE-C
Confidence            5899999999999999999999999997666311 11          1122221 34444133444444  8999999 8


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.  ......++.++...+++.++.
T Consensus       197 g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          197 RG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             SC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CH--HHHHHHHHhhccCCEEEEEeC
Confidence            76  455566666663347776653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.29  E-value=0.0095  Score=46.91  Aligned_cols=90  Identities=18%  Similarity=0.228  Sum_probs=59.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC---HHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD---YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~---~~~~~~~~~~~~~d~v   76 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... +        .+  .+. .++  |..+   .+.+.++....++|+|
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~--------~~--~Ga~~~~--~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL-L--------KD--IGAAHVL--NEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH-H--------HH--HTCSEEE--ETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCCEEE--ECCcHHHHHHHHHHhcCCCCcEE
Confidence            5899999999999999999999999987766311 1        11  122 222  3332   2334444433489999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |++++..  .....++.++...+++.++.
T Consensus       238 id~~g~~--~~~~~~~~l~~~G~iv~~G~  264 (349)
T 3pi7_A          238 LDAVTGP--LASAIFNAMPKRARWIIYGR  264 (349)
T ss_dssp             EESSCHH--HHHHHHHHSCTTCEEEECCC
T ss_pred             EECCCCh--hHHHHHhhhcCCCEEEEEec
Confidence            9999853  34566777775568887664

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.28  E-value=0.0014  Score=51.36  Aligned_cols=64  Identities=13%  Similarity=-0.060  Sum_probs=52.4

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~~   82 (246)
                      .|.+|+.+++.|.+.|+ |.++.+++....  +.          ..++.++.+|.++++.+.++ ++  ++|.|+-+.+.
T Consensus       123 ~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~~  187 (336)
T 1lnq_A          123 WSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES  187 (336)
T ss_dssp             CCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCSS
T ss_pred             CcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCCc
Confidence            48999999999999999 999988776532  21          36789999999999999877 66  89999987653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.26  E-value=0.0038  Score=48.90  Aligned_cols=93  Identities=17%  Similarity=0.241  Sum_probs=58.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+......          ..+... ..|..+.   +.+.+.. ..++|+||
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----------~~g~~~-~~~~~~~~~~~~~~~~~-~~~~d~vi  223 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE----------ELGFDG-AIDYKNEDLAAGLKREC-PKGIDVFF  223 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----------TTCCSE-EEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCCE-EEECCCHHHHHHHHHhc-CCCceEEE
Confidence            6899999999999999999999999988765321101          112221 1244432   2333333 24799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      +++|.  ......++.++...+++.++...
T Consensus       224 ~~~g~--~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          224 DNVGG--EILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred             ECCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence            99984  33444555555445788776544

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.19  E-value=0.0053  Score=48.52  Aligned_cols=92  Identities=15%  Similarity=0.161  Sum_probs=57.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~v   76 (246)
                      +||+|.+|..+++.+...|. +|++++|+..+......          ..+... ..|..+.   +.+.+.... ++|++
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~----------~~g~~~-~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS----------ELGFDA-AINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----------TSCCSE-EEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH----------HcCCce-EEecCchHHHHHHHHhcCC-CCCEE
Confidence            69999999999999999999 99999987654211100          012221 2355442   233333332 79999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      |+++|.  ......++.++...+++.++..
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~  262 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQI  262 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCCG
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECCc
Confidence            999984  3344555655544577776643

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.16  E-value=0.0075  Score=46.78  Aligned_cols=71  Identities=24%  Similarity=0.243  Sum_probs=44.5

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|++|..++..|...+  .+|.++++++.... ..+....      ....+....    ..+++.++++  ++|+||
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~------~~~~l~~~~----~t~d~~~a~~--~aDvVv   73 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIE------TRATVKGYL----GPEQLPDCLK--GCDVVV   73 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSS------SSCEEEEEE----SGGGHHHHHT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccC------cCceEEEec----CCCCHHHHhC--CCCEEE
Confidence            5889999999999999888  78999998762110 0111000      000111110    1234566777  999999


Q ss_pred             ecCCCC
Q 025908           78 DINGRE   83 (246)
Q Consensus        78 ~~~~~~   83 (246)
                      ++++..
T Consensus        74 i~ag~~   79 (314)
T 1mld_A           74 IPAGVP   79 (314)
T ss_dssp             ECCSCC
T ss_pred             ECCCcC
Confidence            999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.16  E-value=0.0094  Score=47.04  Aligned_cols=90  Identities=17%  Similarity=0.177  Sum_probs=57.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|++++|++.+... ..        ++ ....++  |..+   .+.+.++. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~--------~l-Ga~~~~--~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA-CE--------RL-GAKRGI--NYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH--------HH-TCSEEE--ETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------hc-CCCEEE--eCCchHHHHHHHHHh-CCCceEEE
Confidence            5899999999999999999999999988765311 10        11 111222  3333   23344433 45899999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++..  .....++.++...+++.++.
T Consensus       241 d~~g~~--~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGAA--YFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCGG--GHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEEe
Confidence            999853  44556666664456776653

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.15  E-value=0.034  Score=43.05  Aligned_cols=84  Identities=14%  Similarity=0.193  Sum_probs=56.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|++|++.+|++...                .++....    ..+++.++++  ++|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~~----~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESYV----GREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876541                2222221    2367788888  89999877654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..  +  ....+..++...-+|.+|...+
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence            321  1  1344555654556777776554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.08  E-value=0.006  Score=45.42  Aligned_cols=93  Identities=14%  Similarity=0.169  Sum_probs=58.2

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh---hcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~---~~~~~d~v   76 (246)
                      +|++|.+|+.+++.+.+. ++++.+.....+.....+           ..+.. +..|++.++...+.+   .+.+.++|
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-----------~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-----------DGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-----------HTTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-----------ccCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            488999999999999876 799887765543211100           11222 556777766555443   23589999


Q ss_pred             EecCCCCccchHHHHHhCC-C-CceEEEEee
Q 025908           77 YDINGREADEVEPILDALP-N-LEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~-~-~~~~i~~Ss  105 (246)
                      +-+.|........+.++++ . ...+++.+.
T Consensus        74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N  104 (245)
T 1p9l_A           74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPN  104 (245)
T ss_dssp             ECCCCCCHHHHHHHHHHHHTSTTCEEEECSC
T ss_pred             EcCCCCCHHHHHHHHHHHHhCCCCCEEEECC
Confidence            9888876655555555555 2 335555554

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.95  E-value=0.0042  Score=48.93  Aligned_cols=91  Identities=15%  Similarity=0.174  Sum_probs=52.5

Q ss_pred             CCccccchHHHHHHHHHCC-----C-eEEEEecCCC--cccc-CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKA--PIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-----~-~V~~l~r~~~--~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   71 (246)
                      +||||++|+.|++.|++++     + +++.+.+..+  +... ..+..     .. ...+.+  .|+ +.+    .+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l-----~~-~~~~~~--~~~-~~~----~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHL-----TP-LAHRVV--EPT-EAA----VLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTC-----GG-GTTCBC--EEC-CHH----HHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccc-----cc-cceeee--ccC-CHH----Hhc--
Confidence            4999999999999999887     4 7777764332  1111 11110     00 011121  122 232    244  


Q ss_pred             CccEEEecCCCCccchHHHHHhCCCCceEEEEeecce
Q 025908           72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        72 ~~d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ++|+||.+.+...  ...++..++...++|-+|+..-
T Consensus        80 ~~DvVf~alg~~~--s~~~~~~~~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHGH--SAVLAQQLSPETLIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTSC--CHHHHHHSCTTSEEEECSSTTT
T ss_pred             CCCEEEECCCCcc--hHHHHHHHhCCCEEEEECCCcc
Confidence            8999999987653  3445544452257888887653

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.94  E-value=0.0026  Score=52.11  Aligned_cols=68  Identities=16%  Similarity=0.265  Sum_probs=53.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|.+|++|++.|.+.|++|+++.+++..... +.         ...++..+.||-++++.+.++=- .++|.++-+.+
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~-~~---------~~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~   77 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRE-LQ---------DKYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTN   77 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHH-HH---------HHSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH---------HhcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcC
Confidence            56999999999999999999999998766321 11         02478899999999999987742 38999986554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=95.94  E-value=0.0054  Score=48.38  Aligned_cols=90  Identities=11%  Similarity=0.131  Sum_probs=56.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH---HHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ...          ..+... ..|..+.+   .+.+.....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~----------~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVL----------QNGAHE-VFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHH----------HcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            589999999999999999999999998765521 110          112221 23554433   333333333799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +++|..  .....++.++...+++.++
T Consensus       245 ~~~G~~--~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          245 EMLANV--NLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             ESCHHH--HHHHHHHHEEEEEEEEECC
T ss_pred             ECCChH--HHHHHHHhccCCCEEEEEe
Confidence            998742  3344555555334677655

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.67  E-value=0.0045  Score=47.96  Aligned_cols=74  Identities=11%  Similarity=0.131  Sum_probs=49.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCC---CccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      +|+ |-+|++++..|.+.|. +|++..|+.   .+.. .+.    .+... ..+..+...++.+.+++.+.+.  ++|+|
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~-~la----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiI  230 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAE-KTV----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIF  230 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHH-HHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHH-HHH----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEE
Confidence            365 8899999999999997 899999983   2211 110    00000 1234444557777777888887  89999


Q ss_pred             EecCCCC
Q 025908           77 YDINGRE   83 (246)
Q Consensus        77 i~~~~~~   83 (246)
                      |++....
T Consensus       231 INaTp~G  237 (315)
T 3tnl_A          231 TNATGVG  237 (315)
T ss_dssp             EECSSTT
T ss_pred             EECccCC
Confidence            9997653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.62  E-value=0.03  Score=43.17  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      .||..|.++++.++++|++|+.+.|..+
T Consensus        63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           63 SSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3599999999999999999999999654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.57  E-value=0.017  Score=45.87  Aligned_cols=90  Identities=13%  Similarity=0.139  Sum_probs=59.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |.+|...++.+...|.+|+++++++.+......          ..+... ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----------~lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK----------NFGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH----------TSCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hcCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 899999999999999999999988766321110          112221 235566666666654  899999998


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            8542 24566677764457777664

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=95.57  E-value=0.032  Score=43.66  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=57.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... +.        +  .+...+ .|..+   .+.+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~--------~--lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE-LL--------R--LGAAYV-IDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HH--------H--HTCSEE-EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------h--CCCcEE-EeCCcccHHHHHHHHhCCCCCcEEE
Confidence            5888999999999998899999999998776321 11        1  122211 23333   23444444445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +++|..  .....++.++...+++.++.
T Consensus       219 d~~g~~--~~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGGP--DGNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCCh--hHHHHHHHhcCCCEEEEEee
Confidence            998753  23344455554457776653

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.51  E-value=0.016  Score=45.16  Aligned_cols=90  Identities=18%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (246)
                      +||+|-+|...++.+...|.+|+++++++.+... +.          ..+...+ .|..+. .+..+.+...++|+||++
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~~----------~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LR----------VLGAKEV-LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HH----------HTTCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HcCCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence            5889999999999999999999999998766311 11          1122211 233332 111122222479999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEe
Q 025908           80 NGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++.  ......++.++...+++.++
T Consensus       224 ~g~--~~~~~~~~~l~~~G~~v~~G  246 (328)
T 1xa0_A          224 VGG--RTLATVLSRMRYGGAVAVSG  246 (328)
T ss_dssp             STT--TTHHHHHHTEEEEEEEEECS
T ss_pred             CcH--HHHHHHHHhhccCCEEEEEe
Confidence            986  34556666666444677655

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.48  E-value=0.0053  Score=48.67  Aligned_cols=91  Identities=13%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |-+|+.+++.|...|.+|+++.|++.+... +..       .....+..   ...+.+.+.+.+.  ++|+||+++
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~~-------~~~~~~~~---~~~~~~~~~~~~~--~~DvVI~~~  238 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LET-------LFGSRVEL---LYSNSAEIETAVA--EADLLIGAV  238 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHH-------HHGGGSEE---EECCHHHHHHHHH--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHH-------hhCceeEe---eeCCHHHHHHHHc--CCCEEEECC
Confidence            466 999999999999999999999998765211 100       00111212   1234556777776  899999998


Q ss_pred             CCCcc-----chHHHHHhCCCCceEEEEee
Q 025908           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +....     -....++.++....++.++.
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            75331     14456666764456665553

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.41  E-value=0.075  Score=40.79  Aligned_cols=93  Identities=10%  Similarity=0.051  Sum_probs=48.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc--hhhhhhcCceEEEEccCCCHHHHHHhhh-----c-CCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD--QEFAEFSSKILHLKGDRKDYDFVKSSLS-----A-KGFD   74 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~D~~~~~~~~~~~~-----~-~~~d   74 (246)
                      |.|.+|..+++.|++.||+|++..|++.+.......-..  ....+.-....++..-+.+...+.+.+.     . ..-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            569999999999999999999999988774332211000  0001111223333333444443333221     0 1445


Q ss_pred             EEEecCCCCccchHHHHHhCC
Q 025908           75 VVYDINGREADEVEPILDALP   95 (246)
Q Consensus        75 ~vi~~~~~~~~~~~~l~~a~~   95 (246)
                      ++|++.......++.+.+.+.
T Consensus        92 iiid~sT~~p~~~~~~~~~~~  112 (297)
T 4gbj_A           92 VHVSMSTISPETSRQLAQVHE  112 (297)
T ss_dssp             EEEECSCCCHHHHHHHHHHHH
T ss_pred             EEEECCCCChHHHHHHHHHHH
Confidence            777887777777776666554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.35  E-value=0.015  Score=47.52  Aligned_cols=91  Identities=13%  Similarity=0.148  Sum_probs=57.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEE-c--cCCC----------------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK-G--DRKD----------------   60 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~-~--D~~~----------------   60 (246)
                      +||+|-+|...++.+...|.+|++++++..+... ..          ..+.. ++. .  |+.+                
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~-~~----------~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA-VR----------ALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----------HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----------hcCCCEEEecccccccccccccccccchhhhHH
Confidence            5899999999999999999999999886655211 11          11221 111 1  1110                


Q ss_pred             HHHHHHhhhcCCccEEEecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .+.+.+.. ..++|+||+++|.  ......++.++...+++.+++
T Consensus       296 ~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  337 (447)
T 4a0s_A          296 AKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGS  337 (447)
T ss_dssp             HHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCC
T ss_pred             HHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEec
Confidence            23333333 3579999999985  344556666774457887764

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.35  E-value=0.051  Score=42.27  Aligned_cols=84  Identities=12%  Similarity=0.086  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..|+..... ...              ..+.     ..++.++++  ++|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~--------------~~~~-----~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFH--------------ETVA-----FTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCS--------------EEEE-----GGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHh--------------hccc-----cCCHHHHHh--hCCEEEEcCCC
Confidence            5689999999999999999999998865521 110              1111     234556676  88999877654


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....++.++...-+|.+|...+
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence            321    12345666765567887776554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=95.29  E-value=0.00077  Score=52.72  Aligned_cols=70  Identities=14%  Similarity=0.094  Sum_probs=41.6

Q ss_pred             CCccccchHHHHHHHHHCCC--e-----EEEEecCCC--ccc---cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKA--PIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~-----V~~l~r~~~--~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   68 (246)
                      |||+|++|.+++..|...+.  +     +..+++...  +..   ..+.          +-...+. .++.......+.+
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~----------~~~~~~~-~~~~~~~~~~~~~   77 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQ----------DCALPLL-KDVIATDKEEIAF   77 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH----------HTCCTTE-EEEEEESCHHHHT
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhH----------hhhhccc-CCEEEcCCcHHHh
Confidence            69999999999999988764  4     788877542  110   0000          0000000 1222122345567


Q ss_pred             hcCCccEEEecCCCC
Q 025908           69 SAKGFDVVYDINGRE   83 (246)
Q Consensus        69 ~~~~~d~vi~~~~~~   83 (246)
                      +  ++|+||+++|..
T Consensus        78 ~--daDvVvitAg~p   90 (333)
T 5mdh_A           78 K--DLDVAILVGSMP   90 (333)
T ss_dssp             T--TCSEEEECCSCC
T ss_pred             C--CCCEEEEeCCCC
Confidence            6  999999999864

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.23  E-value=0.037  Score=42.28  Aligned_cols=81  Identities=16%  Similarity=0.046  Sum_probs=54.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++.+|+..+.                ..+.       ..+++.++++  ++|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~-------~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQ----------------NVDV-------ISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCT----------------TCSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEecccccc----------------cccc-------ccCChHHHhh--ccCeEEEEeec
Confidence            568999999999999999999999876552                1111       1224556676  88999887664


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..  +  ....++.++...-+|.+|+..+
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~~  213 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARADV  213 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence            321  1  2345666665567887776554

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.16  E-value=0.041  Score=44.80  Aligned_cols=30  Identities=23%  Similarity=0.447  Sum_probs=28.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|++|..++..|.+.|++|++++|++.+.
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            679999999999999999999999998874

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.16  E-value=0.039  Score=37.08  Aligned_cols=76  Identities=11%  Similarity=0.100  Sum_probs=45.9

Q ss_pred             Ccc---ccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |+|   |.+|..+++.|++.|++|+.+.++...                ..++..+       .++.++.+  .+|+++-
T Consensus        21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----------------i~G~~~~-------~s~~el~~--~vDlvii   75 (138)
T 1y81_A           21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----------------IEGLKCY-------RSVRELPK--DVDVIVF   75 (138)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----------------ETTEECB-------SSGGGSCT--TCCEEEE
T ss_pred             eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----------------ECCeeec-------CCHHHhCC--CCCEEEE
Confidence            565   889999999999999998877665422                1223211       12223333  7898887


Q ss_pred             cCCCCccchHHHHHhCC--CCceEEEEe
Q 025908           79 INGREADEVEPILDALP--NLEQFIYCS  104 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~--~~~~~i~~S  104 (246)
                      +..  ......+++.|.  +.+.++..+
T Consensus        76 ~vp--~~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           76 VVP--PKVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             CSC--HHHHHHHHHHHHHTTCCEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence            765  244455554432  666655433

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.10  E-value=0.014  Score=46.48  Aligned_cols=92  Identities=15%  Similarity=0.118  Sum_probs=53.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|-+|...++.+...|.+|+++++ +.+. +.+.          ..+...+ .|..+.+..+++.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~-~~~~----------~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS-ELVR----------KLGADDV-IDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH-HHHH----------HTTCSEE-EETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH-HHHH----------HcCCCEE-EECCchHHHHHHhhcCCCCEEEECC
Confidence            488999999999999999999998874 3331 1111          1222221 2444332223333224799999999


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |.........++.++...+++.++.
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8642222333444454457776653

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.00  E-value=0.019  Score=41.82  Aligned_cols=59  Identities=24%  Similarity=0.215  Sum_probs=41.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |+|.+|+.+++.|.+.|++|++.+|+..+... +.          ..++...        ++.++++  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~-~~----------~~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTAR-LF----------PSAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHH-HS----------BTTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HcCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            37999999999999999999999998655221 11          1234332        2345565  89999988764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.99  E-value=0.033  Score=42.84  Aligned_cols=93  Identities=11%  Similarity=0.069  Sum_probs=56.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCC-C-CchhhhhhcCceEEEEccCCCHHHHHHhhhcC--------C
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-E-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~-~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~--------~   72 (246)
                      |.|.+|..+++.|++.||+|++..|++.+....... . ......+......++..-+.+.+.+++.+...        .
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~   89 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   89 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence            569999999999999999999999987663221110 0 00000111233445555555666666665321        1


Q ss_pred             ccEEEecCCCCccchHHHHHhCC
Q 025908           73 FDVVYDINGREADEVEPILDALP   95 (246)
Q Consensus        73 ~d~vi~~~~~~~~~~~~l~~a~~   95 (246)
                      =+++|+++...+..++.+.+.++
T Consensus        90 g~iiId~sT~~p~~~~~~a~~~~  112 (300)
T 3obb_A           90 GTLVLECSTIAPTSARKIHAAAR  112 (300)
T ss_dssp             -CEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            25677777777777777766654

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.95  E-value=0.077  Score=41.23  Aligned_cols=83  Identities=13%  Similarity=0.101  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..|++...                ..+...    ....++.++++  .+|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRER----------------AGFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------TTCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHh----------------hhhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            569999999999999999999999876431                111101    12356777887  99999977654


Q ss_pred             CccchHHH-----HHhCCCCceEEEEeecce
Q 025908           83 EADEVEPI-----LDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~~~~~l-----~~a~~~~~~~i~~Ss~~v  108 (246)
                      +. .+..+     ++.++...-+|.+|...+
T Consensus       205 t~-~T~~li~~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          205 TR-ETHHLFTASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             CS-SSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred             CH-HHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence            32 22222     333444456777776554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=94.93  E-value=0.015  Score=47.64  Aligned_cols=92  Identities=11%  Similarity=0.168  Sum_probs=56.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEc---cC--------CCH-------
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKG---DR--------KDY-------   61 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~---D~--------~~~-------   61 (246)
                      +||+|-+|...++.+...|.+|+++++++.+.. .+.          ..+.. ++..   |+        .+.       
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~~~----------~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKAE-ICR----------AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HHTCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-HHH----------hhCCcEEEecCcCcccccccccccchHHHHHHH
Confidence            589999999999999999999999998655521 111          11222 1211   11        111       


Q ss_pred             HHHHHhhhcCCccEEEecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+.++....++|+||+++|.  ......++.++...+++.++.
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence            334444433589999999985  344555666664446776553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.85  E-value=0.012  Score=46.20  Aligned_cols=89  Identities=17%  Similarity=0.338  Sum_probs=55.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      +||+|.+|...++.+...|.+|+++ +++.+. +...          ..+...+. +-.+ .+.+.+.....++|+||++
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~----------~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVR----------DLGATPID-ASREPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHH----------HHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHH----------HcCCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence            4889999999999999999999988 554442 1111          12333332 2222 2344444444579999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEe
Q 025908           80 NGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++.  ......++.++...+++.++
T Consensus       224 ~g~--~~~~~~~~~l~~~G~iv~~g  246 (343)
T 3gaz_A          224 LGG--PVLDASFSAVKRFGHVVSCL  246 (343)
T ss_dssp             SCT--HHHHHHHHHEEEEEEEEESC
T ss_pred             CCc--HHHHHHHHHHhcCCeEEEEc
Confidence            984  34455566666445666554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=94.72  E-value=0.017  Score=46.06  Aligned_cols=91  Identities=13%  Similarity=0.112  Sum_probs=59.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |.+|..+++.+...|.+|++.+|++.+.... ..       .+...+   ..+..+.+++.+++.  ++|+||.++
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~-~~-------~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~~  239 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL-DA-------EFCGRI---HTRYSSAYELEGAVK--RADLVIGAV  239 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH-------HTTTSS---EEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HH-------hcCCee---EeccCCHHHHHHHHc--CCCEEEECC
Confidence            366 9999999999999999999999986552110 00       001111   123344566777787  899999987


Q ss_pred             CCCcc-----chHHHHHhCCCCceEEEEee
Q 025908           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +....     -....++.++....+|.+|.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            64321     14556676775457777773

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.62  E-value=0.041  Score=43.54  Aligned_cols=90  Identities=14%  Similarity=0.159  Sum_probs=58.0

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      | +|.+|...++.+...|.+|+++++++.+... .        .+  .+.. ++..+-.+ .+.+.++....++|+||++
T Consensus       197 G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~--------~~--lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~  264 (363)
T 3uog_A          197 G-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-A--------FA--LGADHGINRLEEDWVERVYALTGDRGADHILEI  264 (363)
T ss_dssp             S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH--HTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred             C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-H--------HH--cCCCEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            6 7999999999999999999999987655311 1        11  1222 22211122 2345555544589999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEee
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++  .......++.++...+++.++.
T Consensus       265 ~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          265 AG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             TT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CC--hHHHHHHHHHhhcCCEEEEEec
Confidence            98  3456667777774457777663

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.55  E-value=0.068  Score=41.02  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=26.2

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      ||.|.+|..+++.|.+.|++|+++.|++.
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            57999999999999999999999988754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.43  E-value=0.036  Score=43.02  Aligned_cols=29  Identities=28%  Similarity=0.465  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|++..|++.+
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            56999999999999999999999998765

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.43  E-value=0.036  Score=43.76  Aligned_cols=29  Identities=24%  Similarity=0.371  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|.+..|++.+
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~   57 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNA   57 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            47999999999999999999999998765

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=94.40  E-value=0.011  Score=44.91  Aligned_cols=28  Identities=18%  Similarity=0.099  Sum_probs=22.3

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~   28 (246)
                      +|++|.+|+.+++.+.+. ++++.++.+.
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            589999999999998864 6788755544

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.39  E-value=0.1  Score=40.27  Aligned_cols=79  Identities=16%  Similarity=0.108  Sum_probs=52.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++..|+..+.                .      .+..   ++.++++  .+|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~~~---~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YPFL---SLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SCBC---CHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------cccC---CHHHHHh--hCCEEEEeCCC
Confidence            569999999999999999999998876551                1      1222   3455666  88999877654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....+..++....+|.+|+..+
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg~~  233 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARGAL  233 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence            321  1  1235555654456777776443

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=94.36  E-value=0.13  Score=40.23  Aligned_cols=81  Identities=17%  Similarity=0.075  Sum_probs=50.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|+..+.                .+...       ..++.++++  .+|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            568999999999999999999998876541                11111       124556676  89999877653


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..  +  ....++.++....+|.+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            211  1  1345556665557777776554

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.30  E-value=0.013  Score=47.80  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|++|++++|++.+
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            56999999999999999999999998765

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=94.29  E-value=0.015  Score=47.40  Aligned_cols=30  Identities=23%  Similarity=0.387  Sum_probs=26.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |+|++|..++..|.+.|++|++++|++.+.
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~~   36 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            479999999999999999999999987653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.28  E-value=0.44  Score=35.48  Aligned_cols=102  Identities=18%  Similarity=0.141  Sum_probs=58.6

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCC---------c------hhhhhhcCceEEEE--ccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES---------D------QEFAEFSSKILHLK--GDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~---------~------~~~~~~~~~v~~~~--~D~~~~~~~   64 (246)
                      |.|-+|+++++.|...|. ++++++++.-.. .++....         .      .+..+..+.+++..  .++ +.+.+
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~  112 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHL-SNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL-TGEAL  112 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCG-GGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC-CHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCccc-ccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC-CHHHH
Confidence            347799999999999995 778777664321 1111100         0      11122234444433  333 44667


Q ss_pred             HHhhhcCCccEEEecCCCCccchHH-HHHhCC-CCceEEEEeecceec
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~-l~~a~~-~~~~~i~~Ss~~v~~  110 (246)
                      .++++  ++|+||++... .. ++. +.++|. ..+.+|..+..+.+|
T Consensus       113 ~~~~~--~~DvVi~~~d~-~~-~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          113 KDAVA--RADVVLDCTDN-MA-TRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             HHHHH--HCSEEEECCSS-HH-HHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             HHHHh--cCCEEEECCCC-HH-HHHHHHHHHHHhCCCEEEEeccccce
Confidence            78887  89999988752 22 333 334455 445677776554443

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.21  E-value=0.033  Score=42.47  Aligned_cols=30  Identities=30%  Similarity=0.520  Sum_probs=27.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|.+.|++|++.+|++.+.
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKA   37 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            469999999999999999999999987663

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.19  E-value=0.2  Score=39.22  Aligned_cols=82  Identities=16%  Similarity=0.156  Sum_probs=56.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|+.....   .           ..+..     .   ++.++++  .+|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~-----~---~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTY-----T---DFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------ccccc-----c---CHHHHHh--cCCEEEEcCCC
Confidence            5689999999999999999999999865411   1           12222     1   4556676  89999877664


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....+..++...-+|.+|...+
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~~  240 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGEL  240 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence            321    12356667775567888886555

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.19  E-value=0.13  Score=40.91  Aligned_cols=61  Identities=13%  Similarity=0.111  Sum_probs=46.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|.+|+.+++.+.+.|++|++++..++.....             -.-..+..|+.|.+.+.++.+  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~-------------~ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY-------------VAHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGG-------------GSSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhh-------------hCCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            458899999999999999999998766542211             122456789999999999887  6888764

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=94.15  E-value=0.17  Score=38.99  Aligned_cols=80  Identities=18%  Similarity=0.118  Sum_probs=52.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++..|+...  .               +.       ....++.++++  .+|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~--~---------------~~-------~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE--G---------------PW-------RFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC--S---------------SS-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc--c---------------Cc-------ccCCCHHHHHh--hCCEEEEeCcC
Confidence            56999999999999999999998886541  0               00       01123445676  89999877654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....+..++...-+|.+|+..+
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~~  214 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  214 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence            321  1  1245555665567888876544

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.07  E-value=0.067  Score=42.02  Aligned_cols=90  Identities=11%  Similarity=0.028  Sum_probs=49.3

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      .||+|++|+.+++.|.+++. ++.++.+..+. ...+....    ..+ .+..  ...+.+.+   + +.  ++|+||.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~----~~~-~g~~--~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVH----PNL-RGRT--NLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTC----GGG-TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhC----chh-cCcc--cccccchh---H-hc--CCCEEEEc
Confidence            48999999999999998764 88887764332 11111100    000 0100  01122222   2 34  89999999


Q ss_pred             CCCCccchHHHHHh-CCCCceEEEEeec
Q 025908           80 NGREADEVEPILDA-LPNLEQFIYCSSA  106 (246)
Q Consensus        80 ~~~~~~~~~~l~~a-~~~~~~~i~~Ss~  106 (246)
                      ++...  ...++.. .+...++|-+|+.
T Consensus        76 ~g~~~--s~~~a~~~~~aG~~VId~Sa~  101 (345)
T 2ozp_A           76 LPHGV--FAREFDRYSALAPVLVDLSAD  101 (345)
T ss_dssp             CCTTH--HHHTHHHHHTTCSEEEECSST
T ss_pred             CCcHH--HHHHHHHHHHCCCEEEEcCcc
Confidence            87653  2333332 3322468888864

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.03  E-value=0.12  Score=39.14  Aligned_cols=60  Identities=15%  Similarity=0.151  Sum_probs=42.5

Q ss_pred             cccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      +|.+|++++..|.+.|. +|++..|+..+.. .+.           ..+...     ..+++.+++.  ++|+||++...
T Consensus       125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~-~la-----------~~~~~~-----~~~~~~~~~~--~aDiVInaTp~  185 (277)
T 3don_A          125 AGGASKGIANELYKIVRPTLTVANRTMSRFN-NWS-----------LNINKI-----NLSHAESHLD--EFDIIINTTPA  185 (277)
T ss_dssp             CSHHHHHHHHHHHTTCCSCCEEECSCGGGGT-TCC-----------SCCEEE-----CHHHHHHTGG--GCSEEEECCC-
T ss_pred             CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHH-----------Hhcccc-----cHhhHHHHhc--CCCEEEECccC
Confidence            48899999999999998 8999999877632 222           112211     2455666676  89999998765

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=93.95  E-value=0.025  Score=44.28  Aligned_cols=89  Identities=9%  Similarity=0.023  Sum_probs=55.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +|+ |.+|..+++.+...|.+|++++|++.+... ..          ..+... ..|..+.   +.+.++.  .++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~----------~lGa~~-~~d~~~~~~~~~~~~~~--~~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AK----------ELGADL-VVNPLKEDAAKFMKEKV--GGVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HH----------HTTCSE-EECTTTSCHHHHHHHHH--SSEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----------HCCCCE-EecCCCccHHHHHHHHh--CCCCEEE
Confidence            478 679999999999999999999987665311 10          122222 1355432   2333333  3899999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++++.. ......++.++...+++.++.
T Consensus       236 d~~g~~-~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVSK-PAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCCH-HHHHHHHHHhhcCCEEEEecc
Confidence            998742 234455666663347776653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=93.93  E-value=0.028  Score=43.11  Aligned_cols=83  Identities=17%  Similarity=0.188  Sum_probs=54.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|+..+... .        .  ..++..+     +.+++.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-~--------~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR-I--------A--EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------H--HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------H--HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            46999999999999999999999987654210 0        0  1233332     1234666776  89999988765


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .... ...++.++....+|.++
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~a  244 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLA  244 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECS
T ss_pred             HHhC-HHHHHhcCCCCEEEEec
Confidence            4332 34566676445666555

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=93.90  E-value=0.05  Score=42.74  Aligned_cols=91  Identities=13%  Similarity=0.069  Sum_probs=55.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~v   76 (246)
                      +|+ |.+|...++.+...|. +|++++|++.+... ..          ..+...+ .|..+.   +.+.++....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-~~----------~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL-AK----------KVGADYV-INPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH-HH----------HHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HH----------HhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEE
Confidence            478 9999999999999998 99999987655211 10          1122211 244332   233333333479999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |++++.. ......++.++...+++.+++
T Consensus       241 id~~g~~-~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGAP-KALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEcc
Confidence            9998742 234455666664447777664

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=93.87  E-value=0.034  Score=43.01  Aligned_cols=30  Identities=30%  Similarity=0.460  Sum_probs=27.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|.+.|++|++..|++.+.
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   57 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKC   57 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999987663

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=93.82  E-value=0.23  Score=38.78  Aligned_cols=80  Identities=18%  Similarity=0.150  Sum_probs=51.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++..|+....                .++..    ..   ++.++++  ++|+|+.+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~----~~---~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY----YG---SVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE----ES---CHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee----cC---CHHHHHh--cCCEEEEecCC
Confidence            469999999999999999999998876541                12221    12   2445666  89999987765


Q ss_pred             Cc--cch--HHHHHhCCCCceEEEEeecc
Q 025908           83 EA--DEV--EPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~--~~~--~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ..  ...  ...++.++...-+|.+|+..
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG~  254 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRGP  254 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence            32  111  24555566445666666544

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=93.82  E-value=0.25  Score=38.69  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=55.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|.......             ..++..       .+++.++++  .+|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~-------~~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIY-------HDTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEE-------CSSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeE-------eCCHHHHHh--hCCEEEEecCC
Confidence            56999999999999999999999987544110             012221       124566776  88998877654


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....+..++...-||.+|...+
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~~  267 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGDL  267 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence            321    12355666775567777776554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=93.75  E-value=0.077  Score=40.76  Aligned_cols=83  Identities=14%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|+..+... +.          ..++..+.     .+++.++++  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~-~~----------~~g~~~~~-----~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR-IT----------EMGLVPFH-----TDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----------HTTCEEEE-----GGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HCCCeEEc-----hhhHHHHhh--CCCEEEECCCh
Confidence            35999999999999999999999987654210 00          12333221     234666776  89999998876


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .... ...++.++....+|.++
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a  246 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLA  246 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEe
Confidence            4332 33555566445666555

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=93.72  E-value=0.063  Score=41.65  Aligned_cols=90  Identities=17%  Similarity=0.154  Sum_probs=55.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... +.        +  .+...+ .|..+.+. .+.+...++|++|+++
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~-~~--------~--lGa~~v-i~~~~~~~-~~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY-LK--------S--LGANRI-LSRDEFAE-SRPLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH-HH--------H--HTCSEE-EEGGGSSC-CCSSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------h--cCCCEE-EecCCHHH-HHhhcCCCccEEEECC
Confidence            5889999999999999999999999988766311 11        1  122111 12222222 1222234799999998


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +..  .....++.++...+++.++.
T Consensus       220 g~~--~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GDK--VLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhcCCEEEEEec
Confidence            742  44455565554457776653

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=93.71  E-value=0.019  Score=45.37  Aligned_cols=26  Identities=15%  Similarity=0.374  Sum_probs=20.6

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFT   26 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~   26 (246)
                      +||||++|..|++.|.++++   ++..+.
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~a   36 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLA   36 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence            49999999999999988765   344444

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=93.65  E-value=0.34  Score=35.90  Aligned_cols=97  Identities=12%  Similarity=0.139  Sum_probs=55.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEE-EecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh-hcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~-~~~~~d~vi~   78 (246)
                      +|+ |.+|+.+++.+.+.++++.+ ++|..... ...+-.  ....... ... +..|++.++.+.+.+ .+.+..+|+.
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~-~gv~v~--~dl~~l~-~~D-VvIDft~p~a~~~~~~l~~g~~vVig   82 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKAT-TPYQQY--QHIADVK-GAD-VAIDFSNPNLLFPLLDEDFHLPLVVA   82 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC---CCSCBC--SCTTTCT-TCS-EEEECSCHHHHHHHHTSCCCCCEEEC
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCcccc-CCCcee--CCHHHHh-CCC-EEEEeCChHHHHHHHHHhcCCceEeC
Confidence            477 99999999999998777665 44543321 000000  0000001 222 235778877766555 2347889988


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEe
Q 025908           79 INGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +.|........+.++++. ..+++.+
T Consensus        83 TTG~s~e~~~~l~~aa~~-~~v~~a~  107 (243)
T 3qy9_A           83 TTGEKEKLLNKLDELSQN-MPVFFSA  107 (243)
T ss_dssp             CCSSHHHHHHHHHHHTTT-SEEEECS
T ss_pred             CCCCCHHHHHHHHHHHhc-CCEEEEC
Confidence            887655555566666664 3444444

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=93.65  E-value=0.11  Score=38.83  Aligned_cols=100  Identities=13%  Similarity=0.162  Sum_probs=57.9

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCC---------c------hhhhhhcCc--eEEEEccCCCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES---------D------QEFAEFSSK--ILHLKGDRKDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~---------~------~~~~~~~~~--v~~~~~D~~~~~~~   64 (246)
                      |.|-+|..+++.|...|. ++++++++.-.. .++....         .      .+.....+.  ++.+..+++ .+.+
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~-sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~  115 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSL-SNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAEL  115 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCG-GGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCccc-ccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHH
Confidence            458899999999999996 888888876221 1111000         0      111122233  344444554 4566


Q ss_pred             HHhhhcCCccEEEecCCCCccchHH-HHHhCC-CCceEEEEeecce
Q 025908           65 KSSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGV  108 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~~~~~~-l~~a~~-~~~~~i~~Ss~~v  108 (246)
                      .++++  ++|+||.+... . .++. +.++|. ....+|..+....
T Consensus       116 ~~~~~--~~DvVi~~~d~-~-~~~~~l~~~~~~~~~p~i~~~~~g~  157 (249)
T 1jw9_B          116 AALIA--EHDLVLDCTDN-V-AVRNQLNAGCFAAKVPLVSGAAIRM  157 (249)
T ss_dssp             HHHHH--TSSEEEECCSS-H-HHHHHHHHHHHHHTCCEEEEEEEBT
T ss_pred             HHHHh--CCCEEEEeCCC-H-HHHHHHHHHHHHcCCCEEEeeeccc
Confidence            77787  99999998743 2 2333 344455 3346666654443

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=93.62  E-value=0.11  Score=41.32  Aligned_cols=28  Identities=14%  Similarity=0.308  Sum_probs=21.3

Q ss_pred             CCccccchHHHHH-HHHHCC---CeEEEEecC
Q 025908            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~-~L~~~g---~~V~~l~r~   28 (246)
                      +||||++|+.|++ .|.++.   .++..++.+
T Consensus        10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~   41 (377)
T 3uw3_A           10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS   41 (377)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCceEEEEEech
Confidence            4999999999999 777776   356665543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=93.58  E-value=0.083  Score=41.45  Aligned_cols=91  Identities=14%  Similarity=0.176  Sum_probs=53.5

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH---HHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~~~~~~~~~~~d~v   76 (246)
                      +|++|-+|..+++.+... |.+|+++++++.+... .        .+  .+... ..|..+.+   .+.++....++|++
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~-~--------~~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-A--------KR--AGADY-VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-H--------HH--HTCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-H--------HH--hCCCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence            588889999999999999 9999999987655211 1        01  12211 12444322   24443321379999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      |++++.. ......++.++...+++.++
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g  271 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVG  271 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEC
Confidence            9999842 12223334444334666655

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=93.56  E-value=0.085  Score=35.74  Aligned_cols=75  Identities=8%  Similarity=0.013  Sum_probs=45.5

Q ss_pred             CCcc---ccchHHHHHHHHHCCCeEEEEecCC--CccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccE
Q 025908            1 MGGT---RFIGVFLSRLLVKEGHQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         1 ~Gat---G~iG~~l~~~L~~~g~~V~~l~r~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~   75 (246)
                      +|++   |.+|..+++.|++.|++|+.+.++.  ..                ..++..+ .++.      ++.+  .+|+
T Consensus        19 IGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~----------------i~G~~~~-~sl~------el~~--~~Dl   73 (145)
T 2duw_A           19 VGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT----------------LLGQQGY-ATLA------DVPE--KVDM   73 (145)
T ss_dssp             ESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE----------------ETTEECC-SSTT------TCSS--CCSE
T ss_pred             ECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc----------------cCCeecc-CCHH------HcCC--CCCE
Confidence            3666   7899999999999999988776654  22                1233221 1222      2223  7899


Q ss_pred             EEecCCCCccchHHHHHhCC--CCceEEE
Q 025908           76 VYDINGREADEVEPILDALP--NLEQFIY  102 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~--~~~~~i~  102 (246)
                      ++-+..  ......+++.|.  +.+.++.
T Consensus        74 vii~vp--~~~v~~v~~~~~~~g~~~i~i  100 (145)
T 2duw_A           74 VDVFRN--SEAAWGVAQEAIAIGAKTLWL  100 (145)
T ss_dssp             EECCSC--STHHHHHHHHHHHHTCCEEEC
T ss_pred             EEEEeC--HHHHHHHHHHHHHcCCCEEEE
Confidence            887765  245555555433  6666543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=93.53  E-value=0.033  Score=43.72  Aligned_cols=90  Identities=10%  Similarity=0.074  Sum_probs=54.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi~   78 (246)
                      +||+|.+|...++.+...|.+|+++++++.+.. .+.        +  .+...+ .|..+  .+.+.++ ...++|+||+
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~--------~--lGa~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIE-WTK--------K--MGADIV-LNHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH-HHH--------H--HTCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------h--cCCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence            389999999999999999999999998765521 110        1  122211 12222  2334333 3347999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEe
Q 025908           79 INGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +++.. ......++.++..-+++.++
T Consensus       224 ~~g~~-~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNTD-MYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCHH-HHHHHHHHHEEEEEEEEESS
T ss_pred             CCCch-HHHHHHHHHhccCCEEEEEC
Confidence            98732 12345556666334666443

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=93.52  E-value=0.1  Score=40.91  Aligned_cols=89  Identities=15%  Similarity=0.120  Sum_probs=54.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~v   76 (246)
                      +|+ |.+|...++.+...|. +|+++++++.+.. ....          . ... ..|..+.   +.+.++. ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~----------l-a~~-v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-FARP----------Y-ADR-LVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-GGTT----------T-CSE-EECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHH----------h-HHh-ccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 9999999999999998 9999998765522 1111          1 111 1233331   2333332 3479999


Q ss_pred             EecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |++++.. ......++.++...+++.++.
T Consensus       236 id~~g~~-~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGNE-AAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999742 234456666663347776653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.51  E-value=0.0034  Score=42.64  Aligned_cols=64  Identities=11%  Similarity=0.058  Sum_probs=42.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      | +|.+|+.+++.|.+.|++|++..|+..+......          .-++...  ...   ++.++++  ++|+||.+.+
T Consensus        28 G-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~----------~~~~~~~--~~~---~~~~~~~--~~Divi~at~   89 (144)
T 3oj0_A           28 G-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE----------KYEYEYV--LIN---DIDSLIK--NNDVIITATS   89 (144)
T ss_dssp             C-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH----------HHTCEEE--ECS---CHHHHHH--TCSEEEECSC
T ss_pred             C-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH----------HhCCceE--eec---CHHHHhc--CCCEEEEeCC
Confidence            5 5999999999999999999999988665311100          0122221  222   3445566  8999999987


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus        90 ~~   91 (144)
T 3oj0_A           90 SK   91 (144)
T ss_dssp             CS
T ss_pred             CC
Confidence            64

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=93.48  E-value=0.09  Score=39.73  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +|+ |.+|++++..|.+.|.+|++..|+..+
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            476 779999999999999999999988655

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=93.45  E-value=0.59  Score=37.19  Aligned_cols=61  Identities=15%  Similarity=0.156  Sum_probs=46.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|.+|+.+++.+.+.|++|++++..+......+             .-..+..++.|.+.+.++++  .+|+|..
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvI~~   81 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--ISDVVTY   81 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--hCCEeee
Confidence            4578999999999999999999987655422111             12345678889999999987  7888754

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=93.40  E-value=0.16  Score=40.76  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=46.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|.+|+.+++.+.+.|++|++++ .++.....+.           .....+.+|+.|.+.+.++.+  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            358899999999999999999999 5443222211           222456789999999999987  7888763

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.39  E-value=0.15  Score=40.73  Aligned_cols=88  Identities=16%  Similarity=0.055  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC----------------------CH
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------DY   61 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~----------------------~~   61 (246)
                      .|-+|..+++.+...|.+|++.+|++.+.... .          ..+..++..|..                      ..
T Consensus       180 aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~-~----------~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          180 VGVAGLQAIATAKRLGAVVMATDVRAATKEQV-E----------SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-H----------HTTCEECCC-----------------------CCHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----------HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            59999999999999999999999887652110 0          012222111110                      12


Q ss_pred             HHHHHhhhcCCccEEEecC---CCCcc--chHHHHHhCCCCceEEEEe
Q 025908           62 DFVKSSLSAKGFDVVYDIN---GREAD--EVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~~---~~~~~--~~~~l~~a~~~~~~~i~~S  104 (246)
                      +.+.+++.  ++|+||+++   +....  -....++.++....++.++
T Consensus       249 ~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva  294 (384)
T 1l7d_A          249 EAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  294 (384)
T ss_dssp             HHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence            34667776  899999988   42221  1356677777445666665

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=93.38  E-value=0.1  Score=41.23  Aligned_cols=27  Identities=15%  Similarity=0.396  Sum_probs=20.9

Q ss_pred             CCccccchHHHHH-HHHHCCC---eEEEEec
Q 025908            1 MGGTRFIGVFLSR-LLVKEGH---QVTLFTR   27 (246)
Q Consensus         1 ~GatG~iG~~l~~-~L~~~g~---~V~~l~r   27 (246)
                      +||||++|+.+++ .|.++++   ++..++.
T Consensus         6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss   36 (370)
T 3pzr_A            6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFST   36 (370)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCceEEEEEec
Confidence            4999999999999 7777763   6665544

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=93.37  E-value=0.017  Score=45.84  Aligned_cols=86  Identities=21%  Similarity=0.279  Sum_probs=54.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCC---CccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~   75 (246)
                      +|+ |.+|..+++.+...|.+|++++++.   .+. +...          ..++..+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~----------~~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIE----------ETKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHH----------HHTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHH----------HhCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            488 9999999999999999999999986   442 1110          1234444  4 33  233333 22 47999


Q ss_pred             EEecCCCCccch-HHHHHhCCCCceEEEEe
Q 025908           76 VYDINGREADEV-EPILDALPNLEQFIYCS  104 (246)
Q Consensus        76 vi~~~~~~~~~~-~~l~~a~~~~~~~i~~S  104 (246)
                      ||++++.. ... ...++.++...+++.++
T Consensus       250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g  278 (366)
T 2cdc_A          250 IIDATGAD-VNILGNVIPLLGRNGVLGLFG  278 (366)
T ss_dssp             EEECCCCC-THHHHHHGGGEEEEEEEEECS
T ss_pred             EEECCCCh-HHHHHHHHHHHhcCCEEEEEe
Confidence            99999853 123 44555555334677665

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=93.37  E-value=0.14  Score=41.46  Aligned_cols=61  Identities=16%  Similarity=0.107  Sum_probs=46.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|.+|+.+++.+.+.|++|++++..+......             -.-..+..|+.|.+.+.++.+  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-------------~ad~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-------------VADRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-------------HSSEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhh-------------hCCEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            458899999999999999999997655442111             122455688899999999886  8999884

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=93.27  E-value=0.069  Score=42.11  Aligned_cols=88  Identities=18%  Similarity=0.130  Sum_probs=55.8

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+ |-+|...++.+...|.+|+++++++.+.......          .+... ..|..+.+.+.++..  ++|+||++++
T Consensus       188 Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----------lGa~~-vi~~~~~~~~~~~~~--g~D~vid~~g  253 (357)
T 2cf5_A          188 GL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----------LGADD-YVIGSDQAKMSELAD--SLDYVIDTVP  253 (357)
T ss_dssp             CC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----------SCCSC-EEETTCHHHHHHSTT--TEEEEEECCC
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----------cCCce-eeccccHHHHHHhcC--CCCEEEECCC
Confidence            64 8899999998888899999999987663211100          12211 124445555655543  8999999998


Q ss_pred             CCccchHHHHHhCCCCceEEEEe
Q 025908           82 READEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .. ......++.++...+++.++
T Consensus       254 ~~-~~~~~~~~~l~~~G~iv~~G  275 (357)
T 2cf5_A          254 VH-HALEPYLSLLKLDGKLILMG  275 (357)
T ss_dssp             SC-CCSHHHHTTEEEEEEEEECS
T ss_pred             Ch-HHHHHHHHHhccCCEEEEeC
Confidence            53 23445566666444677655

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.24  E-value=0.096  Score=41.19  Aligned_cols=86  Identities=13%  Similarity=0.066  Sum_probs=55.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|.+..|+..+....         .  ..++..       .+++.++++  .+|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---------~--~~g~~~-------~~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE---------K--ETGAKF-------VEDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH---------H--HHCCEE-------CSCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH---------H--hCCCeE-------cCCHHHHHh--cCCEEEECCCC
Confidence            568999999999999999999999875431100         0  112221       134566777  89999977654


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....+..++...-+|.+|...+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence            321    12456677775567887776554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=93.19  E-value=0.014  Score=45.52  Aligned_cols=90  Identities=18%  Similarity=0.146  Sum_probs=52.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH-HHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~d~vi~~   79 (246)
                      +||+|.+|...++.+...|.+|+++++++.+... +.        +  .+...+ .|..+.+ +..+.+...++|++|++
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~~--------~--lGa~~v-~~~~~~~~~~~~~~~~~~~d~vid~  224 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY-LK--------Q--LGASEV-ISREDVYDGTLKALSKQQWQGAVDP  224 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH-HH--------H--HTCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------H--cCCcEE-EECCCchHHHHHHhhcCCccEEEEC
Confidence            4889999999999998899999999998666311 11        1  122111 1221110 00011222379999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEe
Q 025908           80 NGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++.  ......++.++...+++.++
T Consensus       225 ~g~--~~~~~~~~~l~~~G~iv~~G  247 (330)
T 1tt7_A          225 VGG--KQLASLLSKIQYGGSVAVSG  247 (330)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECC
T ss_pred             CcH--HHHHHHHHhhcCCCEEEEEe
Confidence            985  23344445444334666554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=93.14  E-value=0.062  Score=42.61  Aligned_cols=88  Identities=16%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |-+|...++.+...|.+|+++++++.+... ..        +  .+... ..|..+.+.+.++.  .++|+||+++
T Consensus       201 ~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a~--------~--lGa~~-vi~~~~~~~~~~~~--~g~Dvvid~~  265 (369)
T 1uuf_A          201 VGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AK--------A--LGADE-VVNSRNADEMAAHL--KSFDFILNTV  265 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH--------H--HTCSE-EEETTCHHHHHTTT--TCEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------H--cCCcE-EeccccHHHHHHhh--cCCCEEEECC
Confidence            366 779999999988899999999988766311 10        1  12221 13555555444444  3899999998


Q ss_pred             CCCccchHHHHHhCCCCceEEEEe
Q 025908           81 GREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +.. ......++.++...+++.++
T Consensus       266 g~~-~~~~~~~~~l~~~G~iv~~G  288 (369)
T 1uuf_A          266 AAP-HNLDDFTTLLKRDGTMTLVG  288 (369)
T ss_dssp             SSC-CCHHHHHTTEEEEEEEEECC
T ss_pred             CCH-HHHHHHHHHhccCCEEEEec
Confidence            853 23445566665334677655

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=93.14  E-value=0.046  Score=41.35  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=22.8

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEE-ecCC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l-~r~~   29 (246)
                      +|++|.+|+.+++.+.+. +.++.+. +|+.
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            588999999999999876 4677664 5543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=93.10  E-value=0.03  Score=43.25  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=46.0

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCcc--ccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |+ |-.|++++..|.+.|. +|++..|+..+.  .+.+.    .+... ..+..+...++.+.+.+.+.+.  ++|+||+
T Consensus       155 GA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la----~~~~~-~~~~~v~~~~~~~l~~~~~~l~--~~DiIIN  226 (312)
T 3t4e_A          155 GA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA----KRVNE-NTDCVVTVTDLADQHAFTEALA--SADILTN  226 (312)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--HCSEEEE
T ss_pred             Cc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH----HHhhh-ccCcceEEechHhhhhhHhhcc--CceEEEE
Confidence            55 8899999999999997 899999984321  11110    00000 1223344456656544556666  7899999


Q ss_pred             cCCCC
Q 025908           79 INGRE   83 (246)
Q Consensus        79 ~~~~~   83 (246)
                      +.+..
T Consensus       227 aTp~G  231 (312)
T 3t4e_A          227 GTKVG  231 (312)
T ss_dssp             CSSTT
T ss_pred             CCcCC
Confidence            87654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.04  E-value=0.19  Score=37.53  Aligned_cols=61  Identities=10%  Similarity=0.074  Sum_probs=42.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+|..|++++..|.+.|. +|++..|+..+.. .+..           .+...  .   .+++.++++  ++|+||++..
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~-~la~-----------~~~~~--~---~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAK-ALDF-----------PVKIF--S---LDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHH-TCCS-----------SCEEE--E---GGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHH-----------HcccC--C---HHHHHhhhc--CCCEEEECCC
Confidence            358999999999999997 8999999877632 2221           11111  1   234555666  8999999875


Q ss_pred             C
Q 025908           82 R   82 (246)
Q Consensus        82 ~   82 (246)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.01  E-value=0.23  Score=38.75  Aligned_cols=84  Identities=15%  Similarity=0.101  Sum_probs=53.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++.+|+..+.... .          ..++..     .   ++.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~----------~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-A----------EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-H----------TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-H----------hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            459999999999999999999999876542110 0          122322     1   2445666  88999987765


Q ss_pred             Ccc--ch--HHHHHhCCCCceEEEEeecc
Q 025908           83 EAD--EV--EPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~--~~--~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ...  +.  ..+++.++...-+|.+|+..
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg~  249 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRGD  249 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCCc
Confidence            321  21  34666676445666666543

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=92.96  E-value=0.033  Score=43.64  Aligned_cols=87  Identities=21%  Similarity=0.221  Sum_probs=46.1

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||||++|..|++.|.++.+   ++..+....+. -+.+.         + .+.....-+...     ..++  ++|+||
T Consensus         7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~---------~-~~~~~~~~~~~~-----~~~~--~~Dvvf   68 (344)
T 3tz6_A            7 VGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA---------F-RGQEIEVEDAET-----ADPS--GLDIAL   68 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE---------E-TTEEEEEEETTT-----SCCT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee---------e-cCCceEEEeCCH-----HHhc--cCCEEE
Confidence            49999999999999998854   45555432221 01010         0 111222222221     1234  899999


Q ss_pred             ecCCCCccchHHHHHhC-CCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~  107 (246)
                      .+.+...  .......+ +...++|-.|+..
T Consensus        69 ~a~~~~~--s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           69 FSAGSAM--SKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             ECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCChHH--HHHHHHHHHhCCCEEEECCCcc
Confidence            9887432  23333332 2223677777643

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=92.96  E-value=0.045  Score=43.22  Aligned_cols=92  Identities=22%  Similarity=0.342  Sum_probs=50.3

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      .||+|++|+.+++.|.+++. ++.++.+..+. ...+.    .....+...+   ..|+.-.+  .+.++  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~----~~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSME----SVFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHH----HHCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHH----HhCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence            48999999999999998864 88888764322 11110    0000011111   12332222  33444  89999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEeec
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ++...  .......++...++|-.|+.
T Consensus        90 tp~~~--s~~~a~~~~aG~~VId~sa~  114 (359)
T 1xyg_A           90 LPHGT--TQEIIKELPTALKIVDLSAD  114 (359)
T ss_dssp             CCTTT--HHHHHHTSCTTCEEEECSST
T ss_pred             CCchh--HHHHHHHHhCCCEEEECCcc
Confidence            86543  23333333522367777763

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=92.94  E-value=0.1  Score=40.94  Aligned_cols=86  Identities=20%  Similarity=0.251  Sum_probs=48.7

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccC----CCHHHHHHhhhcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR----KDYDFVKSSLSAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~----~~~~~~~~~~~~~~~d~   75 (246)
                      +||||++|..+++.|.++.. ++..+....+. -+.+.        ...+.+.   .|+    .+.+++   ++  ++|+
T Consensus        19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~~--------~~~p~~~---~~l~~~~~~~~~~---~~--~~Dv   81 (351)
T 1vkn_A           19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLE--------EIFPSTL---ENSILSEFDPEKV---SK--NCDV   81 (351)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHH--------HHCGGGC---CCCBCBCCCHHHH---HH--HCSE
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCChH--------HhChhhc---cCceEEeCCHHHh---hc--CCCE
Confidence            49999999999999999864 67666532211 11110        0001111   122    133333   34  7999


Q ss_pred             EEecCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           76 VYDINGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ||.+++..  ....+...+ ...++|-.|+.
T Consensus        82 vf~alp~~--~s~~~~~~~-~g~~VIDlSsd  109 (351)
T 1vkn_A           82 LFTALPAG--ASYDLVREL-KGVKIIDLGAD  109 (351)
T ss_dssp             EEECCSTT--HHHHHHTTC-CSCEEEESSST
T ss_pred             EEECCCcH--HHHHHHHHh-CCCEEEECChh
Confidence            99887653  334455445 34467777764

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=92.90  E-value=0.18  Score=38.92  Aligned_cols=84  Identities=18%  Similarity=0.095  Sum_probs=55.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++.+|+..+. .. .          ..++..     .+   +.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~----------~~g~~~-----~~---l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEE-RA-K----------EVNGKF-----VD---LETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HH-H----------HTTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChh-hH-h----------hcCccc-----cC---HHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876541 00 0          123332     12   445666  88999977654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....+..++....+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~~  236 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGPV  236 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence            321  1  1346666775567887776544

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=92.89  E-value=0.22  Score=38.52  Aligned_cols=84  Identities=14%  Similarity=0.024  Sum_probs=54.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|++|++.+|+..+.. . .          ..++..     .   ++.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-~----------~~g~~~-----~---~l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK-A-E----------KINAKA-----V---SLEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H-H----------HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhH-H-H----------hcCcee-----c---CHHHHHh--hCCEEEEeccC
Confidence            5699999999999999999999998765421 0 0          123332     1   2445666  88999977654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....+..++....+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~  236 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRAVA  236 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCGGG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCCcc
Confidence            321  1  1356666775567777776444

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=92.84  E-value=0.047  Score=42.79  Aligned_cols=86  Identities=19%  Similarity=0.163  Sum_probs=46.1

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|++|+.+++.|.++++   ++.++....+. .+.+.          ..+..+...|. +++    .++  ++|+||
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~~----------~~g~~i~~~~~-~~~----~~~--~~DvV~   73 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----------FAESSLRVGDV-DSF----DFS--SVGLAF   73 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----------ETTEEEECEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCccc----------cCCcceEEecC-CHH----Hhc--CCCEEE
Confidence            48999999999999997654   45555432111 00000          01112211222 121    244  899999


Q ss_pred             ecCCCCccchHHHHHhCC--CCceEEEEeecc
Q 025908           78 DINGREADEVEPILDALP--NLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~--~~~~~i~~Ss~~  107 (246)
                      .+.+..  ....++..+.  ++ ++|.+|+..
T Consensus        74 ~a~g~~--~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           74 FAAAAE--VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             ECSCHH--HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             EcCCcH--HHHHHHHHHHHCCC-EEEEeCCCC
Confidence            998743  2334444432  54 477777643

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=92.80  E-value=0.086  Score=42.25  Aligned_cols=89  Identities=16%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC----HHHHHHhhhcCCccEE
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~d~v   76 (246)
                      |+ |.+|...++.+...|. +|+++++++.+... ..          ..+..++  |..+    .+.+.++....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~----------~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL-LS----------DAGFETI--DLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HH----------TTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-HH----------HcCCcEE--cCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 8999999998888898 89999988766321 11          1344433  4332    3444444433379999


Q ss_pred             EecCCCCc-------------cchHHHHHhCCCCceEEEEe
Q 025908           77 YDINGREA-------------DEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~-------------~~~~~l~~a~~~~~~~i~~S  104 (246)
                      |++++...             ......++.++...+++.++
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G  299 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG  299 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence            99998642             13455666666334666554

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=92.78  E-value=0.15  Score=41.02  Aligned_cols=91  Identities=15%  Similarity=0.109  Sum_probs=55.2

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~v   76 (246)
                      +|+ |.+|...++.+...|. +|+++++++.+.. ...          ..+...+ .|..+   .+.+.++....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~----------~lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN-LAK----------ELGADHV-IDPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHH----------HHTCSEE-ECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHH----------HcCCCEE-EcCCCCCHHHHHHHHhCCCCCCEE
Confidence            366 8999999999988998 8999887765521 110          1122221 23322   2344444444579999


Q ss_pred             EecCCCCccchHHHHHhC----CCCceEEEEe
Q 025908           77 YDINGREADEVEPILDAL----PNLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~~~~~~l~~a~----~~~~~~i~~S  104 (246)
                      |+++|........+++++    +...+++.++
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G  318 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVA  318 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence            999986532333444444    6445777665

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=92.77  E-value=0.12  Score=41.01  Aligned_cols=90  Identities=11%  Similarity=0.034  Sum_probs=57.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccC------------------CCHHHH
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~------------------~~~~~~   64 (246)
                      |.|-+|...++.+...|.+|++++|++.+.... .          ..+..++..+.                  .+.+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~----------~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV-R----------SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-H----------HTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----------HcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            348999999999999999999999987663211 0          11233322110                  124567


Q ss_pred             HHhhhcCCccEEEecCCCCc-----cchHHHHHhCCCCceEEEEee
Q 025908           65 KSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~~-----~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .++++  ++|+||.++....     .-+..+++.++...-+|-+|.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77777  9999998763321     135678888885456665553

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.73  E-value=0.27  Score=41.34  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=51.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+++++.|.+.|++|.++.+++.....              . ..++.+|.+|++.+.++=- .++|+++-+.+.
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~--------------~-~~~i~gD~t~~~~L~~agi-~~ad~vi~~~~~  418 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCN--------------D-HVVVYGDATVGQTLRQAGI-DRASGIIVTTND  418 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC--------------S-SCEEESCSSSSTHHHHHTT-TSCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhh--------------c-CCEEEeCCCCHHHHHhcCc-cccCEEEEECCC
Confidence            34899999999999999999999998877321              1 1789999999888876543 489999988765


Q ss_pred             C
Q 025908           83 E   83 (246)
Q Consensus        83 ~   83 (246)
                      .
T Consensus       419 d  419 (565)
T 4gx0_A          419 D  419 (565)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=92.71  E-value=0.21  Score=39.17  Aligned_cols=90  Identities=11%  Similarity=0.020  Sum_probs=55.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC----CHHHHHHhhh---cCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----DYDFVKSSLS---AKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~----~~~~~~~~~~---~~~~   73 (246)
                      +|+ |-+|...++.+...|.+|+++++++.+... ..          ..+... ..|..    ..+.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~----------~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV-AK----------NCGADV-TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH----------HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH----------HhCCCE-EEcCcccccHHHHHHHHhccccCCCC
Confidence            365 889999999988899999998887655211 10          112221 12332    2344544443   3479


Q ss_pred             cEEEecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           74 DVVYDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        74 d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      |+||++++.. ......++.++...+++.++
T Consensus       242 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G  271 (352)
T 1e3j_A          242 NVTIDCSGNE-KCITIGINITRTGGTLMLVG  271 (352)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             CEEEECCCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            9999998752 23455667777445777665

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=92.68  E-value=0.1  Score=42.69  Aligned_cols=83  Identities=11%  Similarity=-0.099  Sum_probs=54.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|++.+.....           ..++..        .++.++++  .+|+|+.+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            4699999999999999999999998865421111           123332        13566776  89999987533


Q ss_pred             CccchHHHHHhCCCCceEEEEeec
Q 025908           83 EADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      ...-....++.++....+|.+++.
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSST
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCCC
Confidence            222234566667755577777753

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=92.66  E-value=0.047  Score=43.10  Aligned_cols=28  Identities=18%  Similarity=0.358  Sum_probs=22.1

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (246)
                      +||||++|..+++.|.++. .++..+...
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            5999999999999887776 467666543

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=92.66  E-value=0.047  Score=43.10  Aligned_cols=28  Identities=18%  Similarity=0.358  Sum_probs=22.1

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (246)
                      +||||++|..+++.|.++. .++..+...
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            5999999999999887776 467666543

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=92.63  E-value=0.1  Score=42.86  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.7

Q ss_pred             ccccchHHHHHHHHHC-CC-eEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~-g~-~V~~l~r~~~   30 (246)
                      |.|++|..++..|.+. |+ +|++++|++.
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            5799999999999999 99 9999999988

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=92.62  E-value=0.6  Score=36.74  Aligned_cols=93  Identities=12%  Similarity=0.093  Sum_probs=57.1

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh----hcCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SAKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~----~~~~~d~   75 (246)
                      +|+ |.+|...++.+...|.+ |+++++++.+... .        .++...+..+..|-.+.+++.+.+    ...++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a--------~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF-A--------KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-H--------HHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            376 99999999999889986 8888887665211 1        011122333333433344443333    3347999


Q ss_pred             EEecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           76 VYDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ||++++.. ......++.++...+++.++
T Consensus       256 vid~~g~~-~~~~~~~~~l~~~G~iv~~G  283 (363)
T 3m6i_A          256 ALECTGVE-SSIAAAIWAVKFGGKVFVIG  283 (363)
T ss_dssp             EEECSCCH-HHHHHHHHHSCTTCEEEECC
T ss_pred             EEECCCCh-HHHHHHHHHhcCCCEEEEEc
Confidence            99998742 23456677777445777665

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.61  E-value=0.25  Score=37.81  Aligned_cols=30  Identities=13%  Similarity=0.157  Sum_probs=27.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|.+.|++|++.+|++.+.
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999988763

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=92.61  E-value=0.3  Score=38.07  Aligned_cols=82  Identities=13%  Similarity=0.025  Sum_probs=54.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|+....   ..           ..+.     ..   ++.++++  .+|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence            469999999999999999999999876552   11           1111     11   3455666  88999987655


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....++.++....+|.+|+..+
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~~  237 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARPNL  237 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence            321  1  1346667775567787776444

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=92.61  E-value=0.13  Score=42.24  Aligned_cols=84  Identities=11%  Similarity=-0.075  Sum_probs=56.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..|++.+.....           ..++..        .++.++++  ..|+|+.+.+.
T Consensus       284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G~~~--------~~l~ell~--~aDiVi~~~~t  342 (494)
T 3d64_A          284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEGYRV--------VTMEYAAD--KADIFVTATGN  342 (494)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence            4689999999999999999999998765421111           123332        13566777  89999987643


Q ss_pred             CccchHHHHHhCCCCceEEEEeecc
Q 025908           83 EADEVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ...-....++.++....+|.+++..
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCCc
Confidence            2222345777787556777777643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=92.48  E-value=0.12  Score=42.50  Aligned_cols=81  Identities=10%  Similarity=0.037  Sum_probs=54.4

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      .|.+|..+++.|...|.+|++..+++.+.....           ..++..     .+.   .++++  ++|+||.+.+..
T Consensus       282 ~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga~~-----~~l---~e~l~--~aDvVi~atgt~  340 (494)
T 3ce6_A          282 YGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGFDV-----VTV---EEAIG--DADIVVTATGNK  340 (494)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE-----CCH---HHHGG--GCSEEEECSSSS
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCEE-----ecH---HHHHh--CCCEEEECCCCH
Confidence            599999999999999999999988765521110           134432     122   34565  899999987654


Q ss_pred             ccchHHHHHhCCCCceEEEEee
Q 025908           84 ADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        84 ~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ..-....++.++....++.++.
T Consensus       341 ~~i~~~~l~~mk~ggilvnvG~  362 (494)
T 3ce6_A          341 DIIMLEHIKAMKDHAILGNIGH  362 (494)
T ss_dssp             CSBCHHHHHHSCTTCEEEECSS
T ss_pred             HHHHHHHHHhcCCCcEEEEeCC
Confidence            3233356777875567777764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=92.44  E-value=0.065  Score=43.89  Aligned_cols=86  Identities=19%  Similarity=0.264  Sum_probs=59.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~   81 (246)
                      |.|.+|..+++.| +..++|.++-++..+.....         +.-++..++.||-+|++-+.+. ++  +.|+++-+.+
T Consensus       242 GgG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la---------~~l~~~~Vi~GD~td~~~L~ee~i~--~~D~~ia~T~  309 (461)
T 4g65_A          242 GGGNIGASLAKRL-EQTYSVKLIERNLQRAEKLS---------EELENTIVFCGDAADQELLTEENID--QVDVFIALTN  309 (461)
T ss_dssp             CCSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHH---------HHCTTSEEEESCTTCHHHHHHTTGG--GCSEEEECCS
T ss_pred             cchHHHHHHHHHh-hhcCceEEEecCHHHHHHHH---------HHCCCceEEeccccchhhHhhcCch--hhcEEEEccc
Confidence            5699999999997 45689999988876632111         1125788999999999877654 44  8999987775


Q ss_pred             CCccchHHHHHh--CC--CCceEEEE
Q 025908           82 READEVEPILDA--LP--NLEQFIYC  103 (246)
Q Consensus        82 ~~~~~~~~l~~a--~~--~~~~~i~~  103 (246)
                      .   ...|++-+  ++  ++++.|-.
T Consensus       310 ~---De~Ni~~~llAk~~gv~kvIa~  332 (461)
T 4g65_A          310 E---DETNIMSAMLAKRMGAKKVMVL  332 (461)
T ss_dssp             C---HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             C---cHHHHHHHHHHHHcCCcccccc
Confidence            4   23344433  22  77776643

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=92.43  E-value=0.031  Score=44.13  Aligned_cols=90  Identities=11%  Similarity=-0.001  Sum_probs=52.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+ |.+|...++.+...|.+|+++++++.+... ..        +  .+...+ .|..+..++.+.+. .++|+||+++
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~-~~--------~--lGa~~v-~~~~~~~~~~~~~~-~~~D~vid~~  251 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-AM--------K--MGADHY-IATLEEGDWGEKYF-DTFDLIVVCA  251 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HH--------H--HTCSEE-EEGGGTSCHHHHSC-SCEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HH--------H--cCCCEE-EcCcCchHHHHHhh-cCCCEEEECC
Confidence            477 999999999988889999999988776311 10        1  122211 23333202222332 3899999998


Q ss_pred             CCC-ccchHHHHHhCCCCceEEEEe
Q 025908           81 GRE-ADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        81 ~~~-~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +.. .......++.++...+++.++
T Consensus       252 g~~~~~~~~~~~~~l~~~G~iv~~g  276 (360)
T 1piw_A          252 SSLTDIDFNIMPKAMKVGGRIVSIS  276 (360)
T ss_dssp             SCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred             CCCcHHHHHHHHHHhcCCCEEEEec
Confidence            861 122334455555334666554

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=92.41  E-value=0.88  Score=36.01  Aligned_cols=62  Identities=16%  Similarity=0.060  Sum_probs=45.7

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|.+|+.+++.|.+.|+++++++..+......+             .-..+..|..|.+.+.++.+  ++|.|+...
T Consensus         9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------~~~~~~~~~~d~~~l~~~~~--~~d~v~~~~   70 (380)
T 3ax6_A            9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV-------------ADEQIVAGFFDSERIEDLVK--GSDVTTYDL   70 (380)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--TCSEEEESC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-------------CceEEECCCCCHHHHHHHHh--cCCEEEecc
Confidence            478899999999999999999987654421111             12345678889999888886  899988543

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=92.37  E-value=0.58  Score=37.80  Aligned_cols=65  Identities=18%  Similarity=0.086  Sum_probs=48.5

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      +|.+|+.+++.+.+.|++|+++...+......             ..-..+..|..|.+.+.++.++.++|+|+....
T Consensus        27 ~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~-------------~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e   91 (433)
T 2dwc_A           27 SGELGKEIAIEAQRLGVEVVAVDRYANAPAMQ-------------VAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIE   91 (433)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCHHHH-------------HSSEEEESCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCCCChhhh-------------hcceEEECCCCCHHHHHHHHHHcCCCEEEECcc
Confidence            36789999999999999999998765442110             112356678889998888887678999987654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=92.37  E-value=0.17  Score=40.10  Aligned_cols=86  Identities=12%  Similarity=0.089  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|.||+.+++.|...|.+ |++.+|+..+.... .          ..++..  .     +++.++++  .+|+|+.+..
T Consensus       171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~----------~~g~~~--~-----~~l~ell~--~aDvV~l~~P  230 (364)
T 2j6i_A          171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE-E----------KVGARR--V-----ENIEELVA--QADIVTVNAP  230 (364)
T ss_dssp             CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-H----------HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH-H----------hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence            5699999999999999997 99998876442100 0          123332  1     13456676  8999998766


Q ss_pred             CCcc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           82 READ--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        82 ~~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      .+..  +  ....+..++....+|.+|...+
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG~~  261 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARGAI  261 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCCch
Confidence            5321  1  1335555664456777776444

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=92.36  E-value=0.064  Score=40.86  Aligned_cols=72  Identities=11%  Similarity=0.078  Sum_probs=44.7

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      +|+ |.+|++++..|.+.|. +|+++.|+.++......     ........+.+...++.   ++.+.+.  ++|+||++
T Consensus       133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~-----~~~~~~~~~~i~~~~~~---~l~~~l~--~~DiVIna  201 (283)
T 3jyo_A          133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD-----VINNAVGREAVVGVDAR---GIEDVIA--AADGVVNA  201 (283)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-----HHHHHHTSCCEEEECST---THHHHHH--HSSEEEEC
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-----HHHhhcCCceEEEcCHH---HHHHHHh--cCCEEEEC
Confidence            365 8899999999999997 79999998766321100     00111122333333433   3455666  78999998


Q ss_pred             CCCC
Q 025908           80 NGRE   83 (246)
Q Consensus        80 ~~~~   83 (246)
                      ....
T Consensus       202 Tp~G  205 (283)
T 3jyo_A          202 TPMG  205 (283)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            7643

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=92.33  E-value=0.25  Score=39.51  Aligned_cols=90  Identities=13%  Similarity=0.040  Sum_probs=58.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEcc----------------CCC------
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------   60 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D----------------~~~------   60 (246)
                      |.|-+|...++.+...|.+|+++++++.+.... .          ..+..++..+                +++      
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~----------~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQV-A----------SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH-H----------HTTCEECCCCC-----------------CHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-H----------HcCCceeecccccccccccccchhhhcchhhhhhh
Confidence            349999999999999999999999988763111 0          0122221111                222      


Q ss_pred             HHHHHHhhhcCCccEEEecCCCCc-----cchHHHHHhCCCCceEEEEee
Q 025908           61 YDFVKSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~~~~~~-----~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      .+.+.++++  ++|+||.++....     .-+..+++.++...-+|-+|.
T Consensus       266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            357788887  9999999864321     135678888875556666653

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=92.26  E-value=0.72  Score=36.63  Aligned_cols=65  Identities=11%  Similarity=-0.072  Sum_probs=48.4

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      +|.+|+.+++.+.+.|++|+++...+......             ..-..+..|..|.+.+.++.++.++|+|+....
T Consensus        19 ~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-------------~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e   83 (391)
T 1kjq_A           19 SGELGKEVAIECQRLGVEVIAVDRYADAPAMH-------------VAHRSHVINMLDGDALRRVVELEKPHYIVPEIE   83 (391)
T ss_dssp             CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-------------GSSEEEECCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEECCCCCchhh-------------hccceEECCCCCHHHHHHHHHHcCCCEEEECCC
Confidence            36789999999999999999998765442111             112346678888888888887679999987554

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=92.26  E-value=0.37  Score=37.57  Aligned_cols=82  Identities=11%  Similarity=0.055  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++.+|+..+.   ..           ..+.     ..   ++.++++  .+|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~p~  208 (331)
T 1xdw_A          153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----QV---SLDEVLE--KSDIITIHAPY  208 (331)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----cC---CHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876542   11           1111     11   3455666  88999877554


Q ss_pred             Cc--cc--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~--~~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ..  .+  ....++.++....+|.+|...+
T Consensus       209 t~~t~~li~~~~l~~mk~ga~lin~srg~~  238 (331)
T 1xdw_A          209 IKENGAVVTRDFLKKMKDGAILVNCARGQL  238 (331)
T ss_dssp             CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence            32  11  1346666775567787776544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=92.26  E-value=0.034  Score=42.71  Aligned_cols=68  Identities=7%  Similarity=0.016  Sum_probs=43.8

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+ |.+|+.++..|.+.|. +|++..|+..+.......        ......    +..+.+++.+.+.  ++|+||++.
T Consensus       148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~--------~~~~~~----~~~~~~~~~~~~~--~aDivIn~t  212 (297)
T 2egg_A          148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE--------GDERRS----AYFSLAEAETRLA--EYDIIINTT  212 (297)
T ss_dssp             CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH--------SCSSSC----CEECHHHHHHTGG--GCSEEEECS
T ss_pred             Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH--------hhhccC----ceeeHHHHHhhhc--cCCEEEECC
Confidence            55 7799999999999997 999999986553211000        001000    1113345666776  899999998


Q ss_pred             CCCc
Q 025908           81 GREA   84 (246)
Q Consensus        81 ~~~~   84 (246)
                      +...
T Consensus       213 ~~~~  216 (297)
T 2egg_A          213 SVGM  216 (297)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            7643

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=92.19  E-value=0.33  Score=37.51  Aligned_cols=73  Identities=18%  Similarity=0.057  Sum_probs=46.4

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |++..+|+.+++.|+..|.+|+++.|+..+....-....       ...........++++++.+.+.  ++|+||.+.+
T Consensus       184 G~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la-------~~~~~~t~~~~t~~~~L~e~l~--~ADIVIsAtg  254 (320)
T 1edz_A          184 NRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK-------LNKHHVEDLGEYSEDLLKKCSL--DSDVVITGVP  254 (320)
T ss_dssp             CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS-------CCCCEEEEEEECCHHHHHHHHH--HCSEEEECCC
T ss_pred             CCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh-------hhcccccccccccHhHHHHHhc--cCCEEEECCC
Confidence            666678999999999999999999887544322111100       0001111111133477888888  9999999887


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus       255 ~p  256 (320)
T 1edz_A          255 SE  256 (320)
T ss_dssp             CT
T ss_pred             CC
Confidence            63

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=92.14  E-value=0.18  Score=39.77  Aligned_cols=92  Identities=15%  Similarity=0.162  Sum_probs=54.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc---ccCCCCCCchhhhhhcCceE-EEEccC---CC-HHHHHHhh--hc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI---AQQLPGESDQEFAEFSSKIL-HLKGDR---KD-YDFVKSSL--SA   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~---~~~~~~~~~~~~~~~~~~v~-~~~~D~---~~-~~~~~~~~--~~   70 (246)
                      +||+|-+|...++.+...|.+|++++++.++.   ...+.          ..+.. ++..+-   .+ .+.+.++.  ..
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----------~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~  243 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK----------ELGATQVITEDQNNSREFGPTIKEWIKQSG  243 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH----------HHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH----------hcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence            58899999999998888899999998766541   01110          11222 222110   11 22333333  23


Q ss_pred             CCccEEEecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           71 KGFDVVYDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .++|+||++++..  .....++.++...+++.++
T Consensus       244 ~g~Dvvid~~G~~--~~~~~~~~l~~~G~~v~~g  275 (364)
T 1gu7_A          244 GEAKLALNCVGGK--SSTGIARKLNNNGLMLTYG  275 (364)
T ss_dssp             CCEEEEEESSCHH--HHHHHHHTSCTTCEEEECC
T ss_pred             CCceEEEECCCch--hHHHHHHHhccCCEEEEec
Confidence            4799999998753  2234566676445777665

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=92.12  E-value=0.16  Score=39.69  Aligned_cols=84  Identities=11%  Similarity=0.043  Sum_probs=54.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|+..+. ..           ...++..     .   ++.++++  ++|+|+.+...
T Consensus       172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-----------~~~g~~~-----~---~l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          172 GLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-----------ASFGVQQ-----L---PLEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-----------HHTTCEE-----C---CHHHHGG--GCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-----------hhcCcee-----C---CHHHHHh--cCCEEEEecCC
Confidence            569999999999999999999998875541 00           0123332     1   3456776  89999987665


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....++.++....+|.+|+..+
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~arg~v  259 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCARGGI  259 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence            421  1  1345566665557787776443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=91.97  E-value=0.39  Score=36.38  Aligned_cols=48  Identities=15%  Similarity=0.250  Sum_probs=36.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++.+|+.++..|+..|.+|++..|..                                ..+.+.++  ..|+||.+.
T Consensus       166 vGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------------------------~~L~~~~~--~ADIVI~Av  211 (285)
T 3p2o_A          166 IGASNIVGRPMATMLLNAGATVSVCHIKT--------------------------------KDLSLYTR--QADLIIVAA  211 (285)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------------------SCHHHHHT--TCSEEEECS
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHHhh--cCCEEEECC
Confidence            47788899999999999998888875432                                12445666  899999998


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus       212 g~  213 (285)
T 3p2o_A          212 GC  213 (285)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=91.97  E-value=0.15  Score=41.19  Aligned_cols=82  Identities=12%  Similarity=0.032  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++..+++.+....           ...++++.     +   +.++++  ..|+|+.+.+.
T Consensus       254 G~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-----------~~~G~~vv-----~---LeElL~--~ADIVv~atgt  312 (464)
T 3n58_A          254 GYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-----------AMDGFEVV-----T---LDDAAS--TADIVVTTTGN  312 (464)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTTCEEC-----C---HHHHGG--GCSEEEECCSS
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-----------HhcCceec-----c---HHHHHh--hCCEEEECCCC
Confidence            468899999999999999999988765431110           01344332     2   345776  89999987654


Q ss_pred             CccchHHHHHhCCCCceEEEEee
Q 025908           83 EADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ...-....++.++....+|.++-
T Consensus       313 ~~lI~~e~l~~MK~GAILINvGR  335 (464)
T 3n58_A          313 KDVITIDHMRKMKDMCIVGNIGH  335 (464)
T ss_dssp             SSSBCHHHHHHSCTTEEEEECSS
T ss_pred             ccccCHHHHhcCCCCeEEEEcCC
Confidence            33334566777875556776653

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=91.88  E-value=0.097  Score=39.81  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..++..|.+.|++|++.+|++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            46999999999999999999999988755

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=91.87  E-value=0.26  Score=39.05  Aligned_cols=65  Identities=17%  Similarity=0.307  Sum_probs=37.0

Q ss_pred             CCccccchHHHHH-HHHHCCC---eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEE
Q 025908            1 MGGTRFIGVFLSR-LLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~-~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~v   76 (246)
                      .||+|++|+.+++ .|.++++   .++.+..+..  -..++.         ..+..+...+..+++.    ++  ++|+|
T Consensus         7 vGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~--G~~v~~---------~~g~~i~~~~~~~~~~----~~--~~DvV   69 (367)
T 1t4b_A            7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL--GQAAPS---------FGGTTGTLQDAFDLEA----LK--ALDII   69 (367)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST--TSBCCG---------GGTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCC--CCCccc---------cCCCceEEEecCChHH----hc--CCCEE
Confidence            4899999999999 5555553   4556655421  111110         0112222234444444    34  89999


Q ss_pred             EecCCC
Q 025908           77 YDINGR   82 (246)
Q Consensus        77 i~~~~~   82 (246)
                      |.+.+.
T Consensus        70 f~a~g~   75 (367)
T 1t4b_A           70 VTCQGG   75 (367)
T ss_dssp             EECSCH
T ss_pred             EECCCc
Confidence            999874

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=91.77  E-value=0.098  Score=40.42  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=24.6

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK   29 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~   29 (246)
                      |.|.+|..+++.|.+.|+ +|++..|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            569999999999999999 999999973

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=91.71  E-value=0.29  Score=39.29  Aligned_cols=28  Identities=25%  Similarity=0.254  Sum_probs=24.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      |.|.||+.+++.|...|.+|++..|...
T Consensus       152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~  179 (404)
T 1sc6_A          152 GYGHIGTQLGILAESLGMYVYFYDIENK  179 (404)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            5689999999999999999999988654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=91.63  E-value=0.24  Score=39.70  Aligned_cols=89  Identities=13%  Similarity=0.059  Sum_probs=55.5

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-------------CH-------HH
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------DF   63 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~-------~~   63 (246)
                      .|-+|..+++.+...|.+|++++|++.+.... .          ..+..++..|..             +.       +.
T Consensus       180 aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~----------~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          180 AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-Q----------SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-H----------HTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-H----------HcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            59999999999999999999999887652111 1          123333222211             11       14


Q ss_pred             HHHhhhcCCccEEEecCCCC---c-c-chHHHHHhCCCCceEEEEee
Q 025908           64 VKSSLSAKGFDVVYDINGRE---A-D-EVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        64 ~~~~~~~~~~d~vi~~~~~~---~-~-~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +.+++.  ++|+||.++...   . . -....++.++....+|.++.
T Consensus       249 l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          249 FAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            666776  899999986331   1 1 23567788875456776663

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=91.57  E-value=0.18  Score=38.13  Aligned_cols=30  Identities=13%  Similarity=0.051  Sum_probs=26.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +|+ |.+|++++..|.+.|.+|++..|+..+
T Consensus       125 lGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~  154 (272)
T 1p77_A          125 LGA-GGATKGVLLPLLQAQQNIVLANRTFSK  154 (272)
T ss_dssp             ECC-SHHHHTTHHHHHHTTCEEEEEESSHHH
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            466 779999999999999999999998765

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=91.52  E-value=0.19  Score=40.50  Aligned_cols=81  Identities=15%  Similarity=0.038  Sum_probs=53.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++..+++.+.....           ..+++..        .+.++++  +.|+|+.+.+.
T Consensus       227 G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G~~v~--------~Leeal~--~ADIVi~atgt  285 (435)
T 3gvp_A          227 GYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDGFRLV--------KLNEVIR--QVDIVITCTGN  285 (435)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcCCEec--------cHHHHHh--cCCEEEECCCC
Confidence            4689999999999999999999888754321100           1233321        2556776  89999997554


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ...-....++.++....++.++
T Consensus       286 ~~lI~~e~l~~MK~gailINvg  307 (435)
T 3gvp_A          286 KNVVTREHLDRMKNSCIVCNMG  307 (435)
T ss_dssp             SCSBCHHHHHHSCTTEEEEECS
T ss_pred             cccCCHHHHHhcCCCcEEEEec
Confidence            3333445677777445666555

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=91.48  E-value=0.39  Score=42.26  Aligned_cols=89  Identities=16%  Similarity=0.134  Sum_probs=56.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC---HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---~~~~~~~~~~~~~d~vi   77 (246)
                      .||+|-+|...++.+...|.+|+++++.. +. ..+.  .        ..-.++  |..+   .+.+.+.....++|+|+
T Consensus       352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~-~~l~--l--------ga~~v~--~~~~~~~~~~i~~~t~g~GvDvVl  417 (795)
T 3slk_A          352 HSAAGGVGMAAIQLARHLGAEVYATASED-KW-QAVE--L--------SREHLA--SSRTCDFEQQFLGATGGRGVDVVL  417 (795)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCCEEEECCGG-GG-GGSC--S--------CGGGEE--CSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred             ecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hh-hhhh--c--------Chhhee--ecCChhHHHHHHHHcCCCCeEEEE
Confidence            38899999999999999999999988665 31 1111  0        111111  2222   23344444445899999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++.+.  ......++.++..-+||.++.
T Consensus       418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~  443 (795)
T 3slk_A          418 NSLAG--EFADASLRMLPRGGRFLELGK  443 (795)
T ss_dssp             ECCCT--TTTHHHHTSCTTCEEEEECCS
T ss_pred             ECCCc--HHHHHHHHHhcCCCEEEEecc
Confidence            98865  344566666665568887764

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=91.46  E-value=0.3  Score=39.25  Aligned_cols=28  Identities=21%  Similarity=0.266  Sum_probs=24.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      |.|.||+.+++.|...|.+|++.+|.+.
T Consensus       163 GlG~IG~~vA~~l~~~G~~V~~yd~~~~  190 (416)
T 3k5p_A          163 GYGNIGSQVGNLAESLGMTVRYYDTSDK  190 (416)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCcch
Confidence            5689999999999999999999998743

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=91.43  E-value=0.11  Score=39.47  Aligned_cols=31  Identities=13%  Similarity=0.266  Sum_probs=27.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +|+||.+|..+++.|.+.|++|++.+|++.+
T Consensus        17 IG~tG~mG~~la~~l~~~g~~V~~~~r~~~~   47 (286)
T 3c24_A           17 LGAGGKMGARITRKIHDSAHHLAAIEIAPEG   47 (286)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEECCSHHH
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            3677999999999999999999999887654

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=91.42  E-value=0.37  Score=37.34  Aligned_cols=85  Identities=15%  Similarity=0.100  Sum_probs=52.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEec-CCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|.+|+.+++.|...|++|++.+| +..+. ..         .  ..++..  .     +++.++++  ++|+|+.+..
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~---------~--~~g~~~--~-----~~l~ell~--~aDvVil~~p  211 (320)
T 1gdh_A          153 GFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DE---------A--SYQATF--H-----DSLDSLLS--VSQFFSLNAP  211 (320)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HH---------H--HHTCEE--C-----SSHHHHHH--HCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hh---------h--hcCcEE--c-----CCHHHHHh--hCCEEEEecc
Confidence            5699999999999999999999998 65441 00         0  123332  1     12455666  8899987765


Q ss_pred             CCcc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           82 READ--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        82 ~~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ....  +  ....++.++....+|.+|+..+
T Consensus       212 ~~~~t~~~i~~~~l~~mk~gailIn~arg~~  242 (320)
T 1gdh_A          212 STPETRYFFNKATIKSLPQGAIVVNTARGDL  242 (320)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             CchHHHhhcCHHHHhhCCCCcEEEECCCCcc
Confidence            4321  1  1234455654456777776443

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=91.36  E-value=0.16  Score=40.01  Aligned_cols=85  Identities=14%  Similarity=0.078  Sum_probs=54.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|+.... .           ....+++.+       +++.++++  ++|+|+.+...
T Consensus       167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~-----------~~~~g~~~~-------~~l~ell~--~aDiV~l~~Pl  225 (352)
T 3gg9_A          167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKE-R-----------ARADGFAVA-------ESKDALFE--QSDVLSVHLRL  225 (352)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSHHHHH-H-----------HHHTTCEEC-------SSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHhCCCEEEEECCCCCHH-H-----------HHhcCceEe-------CCHHHHHh--hCCEEEEeccC
Confidence            568999999999999999999998864221 0           001334321       24556676  88999877654


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..  +  ....+..++...-||.+|...+
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence            321  1  2345566665567888886554

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=91.35  E-value=0.22  Score=39.51  Aligned_cols=81  Identities=19%  Similarity=0.141  Sum_probs=49.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|.+..|......               ..        ....++.++++  .+|+|+.+...
T Consensus       126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~--------~~~~sl~ell~--~aDiV~l~~Pl  180 (381)
T 3oet_A          126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE--------GDFRTLDELVQ--EADVLTFHTPL  180 (381)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC--------SCBCCHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC--------cccCCHHHHHh--hCCEEEEcCcC
Confidence            5699999999999999999999977432210               00        01123455565  67777766543


Q ss_pred             Ccc------c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD------E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~------~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..      +  ....++.++...-+|.+|...+
T Consensus       181 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v  214 (381)
T 3oet_A          181 YKDGPYKTLHLADETLIRRLKPGAILINACRGPV  214 (381)
T ss_dssp             CCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CccccccchhhcCHHHHhcCCCCcEEEECCCCcc
Confidence            322      1  1345555664456666666554

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=91.35  E-value=0.061  Score=42.09  Aligned_cols=87  Identities=11%  Similarity=0.001  Sum_probs=47.3

Q ss_pred             CCccccchHHHHHHHHHCC---CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      .||+|++|+.+++.|.+++   .++.++....+. .+.+.          ..+..+...+.. ++    .++  ++|+||
T Consensus         9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~----------~~~~~i~~~~~~-~~----~~~--~vDvVf   70 (336)
T 2r00_A            9 FGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR----------FNGKTVRVQNVE-EF----DWS--QVHIAL   70 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEGG-GC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee----------ecCceeEEecCC-hH----Hhc--CCCEEE
Confidence            4899999999999999883   467777632211 00000          011122122221 21    234  899999


Q ss_pred             ecCCCCccchHHHHHhC-CCCceEEEEeecc
Q 025908           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~-~~~~~~i~~Ss~~  107 (246)
                      .+.+...  .......+ +...++|-.|+..
T Consensus        71 ~a~g~~~--s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           71 FSAGGEL--SAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCchH--HHHHHHHHHHcCCEEEEcCCcc
Confidence            9887542  23333332 2223677777653

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=91.23  E-value=0.22  Score=39.08  Aligned_cols=86  Identities=13%  Similarity=0.053  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHH-HCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|.+|+.+++.|. ..|++|++.+|+..+....         .  ..++...    .   ++.++++  .+|+|+.+..
T Consensus       170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~~----~---~l~ell~--~aDvVil~vp  229 (348)
T 2w2k_A          170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE---------K--ALGAERV----D---SLEELAR--RSDCVSVSVP  229 (348)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH---------H--HHTCEEC----S---SHHHHHH--HCSEEEECCC
T ss_pred             EECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH---------h--hcCcEEe----C---CHHHHhc--cCCEEEEeCC
Confidence            46999999999999 8999999998876542110         0  1133321    1   2445666  8899998776


Q ss_pred             CCcc--ch--HHHHHhCCCCceEEEEeecce
Q 025908           82 READ--EV--EPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        82 ~~~~--~~--~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ....  +.  ..++..++...-+|.+|+..+
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg~~  260 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARGPV  260 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence            5421  11  245666764456676665443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=91.21  E-value=0.045  Score=42.15  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..++..|.+.|++|++++|++.+
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            35999999999999999999999997654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=91.19  E-value=0.1  Score=40.99  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=53.2

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+ |.+|...++.+...|.+|+++++++.+... +.          ..+...+.   .+.+.+    .+ ++|+||++++
T Consensus       184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~----------~lGa~~v~---~~~~~~----~~-~~D~vid~~g  243 (348)
T 3two_A          184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD-AL----------SMGVKHFY---TDPKQC----KE-ELDFIISTIP  243 (348)
T ss_dssp             SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH-HH----------HTTCSEEE---SSGGGC----CS-CEEEEEECCC
T ss_pred             CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HH----------hcCCCeec---CCHHHH----hc-CCCEEEECCC
Confidence            65 899999999998899999999988776321 11          12333222   333322    21 8999999988


Q ss_pred             CCccchHHHHHhCCCCceEEEEe
Q 025908           82 READEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .. ......++.++...+++.++
T Consensus       244 ~~-~~~~~~~~~l~~~G~iv~~G  265 (348)
T 3two_A          244 TH-YDLKDYLKLLTYNGDLALVG  265 (348)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECC
T ss_pred             cH-HHHHHHHHHHhcCCEEEEEC
Confidence            54 24455666666445777665

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=91.19  E-value=0.19  Score=39.98  Aligned_cols=91  Identities=11%  Similarity=0.099  Sum_probs=54.8

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC--CHHH----HHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDF----VKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~----~~~~~~~~~~   73 (246)
                      +| +|-+|...++.+...| .+|+++++++.+... +.          ..+...+ .|..  +.++    +.++....++
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-~~----------~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKL-AE----------EIGADLT-LNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH-HH----------HTTCSEE-EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHH-HH----------HcCCcEE-EeccccCcchHHHHHHHHhCCCCC
Confidence            36 7999999999998899 699999987665211 11          1222211 2332  1223    3333333379


Q ss_pred             cEEEecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        74 d~vi~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      |+||++++.. ......++.++...+++.++.
T Consensus       269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred             cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999999742 234456666664447776653

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=91.10  E-value=0.12  Score=39.44  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|++.+|++.+
T Consensus         7 G~G~mG~~~a~~l~~~g~~V~~~~~~~~~   35 (296)
T 2gf2_A            7 GLGNMGNPMAKNLMKHGYPLIIYDVFPDA   35 (296)
T ss_dssp             CCSTTHHHHHHHHHHTTCCEEEECSSTHH
T ss_pred             eccHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46999999999999999999999998765

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=91.06  E-value=0.56  Score=35.52  Aligned_cols=48  Identities=25%  Similarity=0.305  Sum_probs=36.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++.+|+.++..|+..|.+|++..|..                                ..+.+.++  ..|+||.+.
T Consensus       167 IG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------------------~~L~~~~~--~ADIVI~Av  212 (285)
T 3l07_A          167 VGASNVVGKPVSQLLLNAKATVTTCHRFT--------------------------------TDLKSHTT--KADILIVAV  212 (285)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------------------SSHHHHHT--TCSEEEECC
T ss_pred             ECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHhcc--cCCEEEECC
Confidence            37778899999999999998888775431                                12445666  899999998


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus       213 g~  214 (285)
T 3l07_A          213 GK  214 (285)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=91.00  E-value=0.24  Score=39.15  Aligned_cols=84  Identities=15%  Similarity=0.141  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|...|.+|++.+|.......            ...++..        .++.++++  .+|+|+.+...
T Consensus       183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~------------~~~g~~~--------~~l~ell~--~aDvV~l~~Pl  240 (365)
T 4hy3_A          183 GFGDLGKALRRVLSGFRARIRVFDPWLPRSML------------EENGVEP--------ASLEDVLT--KSDFIFVVAAV  240 (365)
T ss_dssp             CCSHHHHHHHHHHTTSCCEEEEECSSSCHHHH------------HHTTCEE--------CCHHHHHH--SCSEEEECSCS
T ss_pred             cCCcccHHHHHhhhhCCCEEEEECCCCCHHHH------------hhcCeee--------CCHHHHHh--cCCEEEEcCcC
Confidence            56899999999999899999999887432100            0123331        23556676  88999877654


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....+..++....||.+|...+
T Consensus       241 t~~T~~li~~~~l~~mk~gailIN~aRG~~  270 (365)
T 4hy3_A          241 TSENKRFLGAEAFSSMRRGAAFILLSRADV  270 (365)
T ss_dssp             SCC---CCCHHHHHTSCTTCEEEECSCGGG
T ss_pred             CHHHHhhcCHHHHhcCCCCcEEEECcCCch
Confidence            321    12345666665567777776554

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=90.95  E-value=0.41  Score=37.34  Aligned_cols=83  Identities=14%  Similarity=0.085  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|++.+|+..+..   .           ..+     +..  +++.++++  ++|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~-----------~~~-----~~~--~~l~ell~--~aDvV~l~~p~  209 (333)
T 1j4a_A          153 GTGHIGQVFMQIMEGFGAKVITYDIFRNPEL---E-----------KKG-----YYV--DSLDDLYK--QADVISLHVPD  209 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH---H-----------HTT-----CBC--SCHHHHHH--HCSEEEECSCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCcchhH---H-----------hhC-----eec--CCHHHHHh--hCCEEEEcCCC
Confidence            5699999999999999999999998765420   0           001     111  13455666  78999887664


Q ss_pred             Ccc--c--hHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      ...  +  ....++.++....+|.+|+..+
T Consensus       210 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~  239 (333)
T 1j4a_A          210 VPANVHMINDESIAKMKQDVVIVNVSRGPL  239 (333)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             cHHHHHHHhHHHHhhCCCCcEEEECCCCcc
Confidence            322  1  1345566765557777776554

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=90.93  E-value=0.21  Score=39.95  Aligned_cols=89  Identities=15%  Similarity=0.059  Sum_probs=54.8

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC----HHHHHHhhhcCCccEE
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~d~v   76 (246)
                      | +|-+|...++.+...|. +|+++++++.+... ..          ..++..+  |..+    .+.+.++....++|+|
T Consensus       193 G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~-a~----------~lGa~~i--~~~~~~~~~~~v~~~t~g~g~Dvv  258 (398)
T 1kol_A          193 G-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH-AK----------AQGFEIA--DLSLDTPLHEQIAALLGEPEVDCA  258 (398)
T ss_dssp             C-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HH----------HTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             C-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH-HH----------HcCCcEE--ccCCcchHHHHHHHHhCCCCCCEE
Confidence            6 58999999998888897 78888887655211 11          1344433  4332    2344444433479999


Q ss_pred             EecCCCCc--------------cchHHHHHhCCCCceEEEEe
Q 025908           77 YDINGREA--------------DEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        77 i~~~~~~~--------------~~~~~l~~a~~~~~~~i~~S  104 (246)
                      |++++...              ......++.++...+++.++
T Consensus       259 id~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G  300 (398)
T 1kol_A          259 VDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  300 (398)
T ss_dssp             EECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             EECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence            99998642              12445666666334676555

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=90.91  E-value=0.44  Score=35.90  Aligned_cols=48  Identities=19%  Similarity=0.201  Sum_probs=37.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++.+|+.++..|+..|.+|++..|+.                                ..+.+.++  ..|+||.+.
T Consensus       156 vG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------------------~~L~~~~~--~ADIVI~Av  201 (276)
T 3ngx_A          156 VNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------------------KDIGSMTR--SSKIVVVAV  201 (276)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------------------SCHHHHHH--HSSEEEECS
T ss_pred             EcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------------------ccHHHhhc--cCCEEEECC
Confidence            47888899999999999999999876532                                12445566  899999988


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus       202 g~  203 (276)
T 3ngx_A          202 GR  203 (276)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=90.90  E-value=0.17  Score=34.25  Aligned_cols=27  Identities=15%  Similarity=0.219  Sum_probs=22.2

Q ss_pred             CCcc---ccchHHHHHHHHHCCCeEEEEec
Q 025908            1 MGGT---RFIGVFLSRLLVKEGHQVTLFTR   27 (246)
Q Consensus         1 ~Gat---G~iG~~l~~~L~~~g~~V~~l~r   27 (246)
                      +|++   |.+|..+++.|.+.|++|+.+..
T Consensus        28 VGas~~~g~~G~~~~~~l~~~G~~v~~Vnp   57 (144)
T 2d59_A           28 VGASPKPERDANIVMKYLLEHGYDVYPVNP   57 (144)
T ss_dssp             ETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             EccCCCCCchHHHHHHHHHHCCCEEEEECC
Confidence            3777   78999999999999998776643

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=90.86  E-value=0.6  Score=35.36  Aligned_cols=48  Identities=23%  Similarity=0.272  Sum_probs=36.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +|+++.+|+.++..|+..|.+|++..++.                                ..+.+.++  ..|+||.+.
T Consensus       167 vGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------------------------~~L~~~~~--~ADIVI~Av  212 (286)
T 4a5o_A          167 VGASNIVGRPMALELLLGGCTVTVTHRFT--------------------------------RDLADHVS--RADLVVVAA  212 (286)
T ss_dssp             ECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------------------------SCHHHHHH--TCSEEEECC
T ss_pred             ECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------------------------cCHHHHhc--cCCEEEECC
Confidence            37788899999999999998888875432                                12445666  999999998


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus       213 g~  214 (286)
T 4a5o_A          213 GK  214 (286)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=90.84  E-value=0.01  Score=46.50  Aligned_cols=71  Identities=11%  Similarity=0.146  Sum_probs=41.9

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCccccCCCCCCchhhhhh-cCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +|++|++|..++..++..|  .+|..++++..+......+.   ....+ ..++.+       ..+..++++  ++|+||
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL---~~~~~~~~~i~~-------t~d~~~al~--dADvVv   81 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEI---RHCGFEGLNLTF-------TSDIKEALT--DAKYIV   81 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHH---HHHCCTTCCCEE-------ESCHHHHHT--TEEEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhh---hhCcCCCCceEE-------cCCHHHHhC--CCCEEE
Confidence            4888999999999999988  58999888654421000000   00000 011211       123445676  999999


Q ss_pred             ecCCCC
Q 025908           78 DINGRE   83 (246)
Q Consensus        78 ~~~~~~   83 (246)
                      .++|..
T Consensus        82 itaG~p   87 (343)
T 3fi9_A           82 SSGGAP   87 (343)
T ss_dssp             ECCC--
T ss_pred             EccCCC
Confidence            999864

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=90.81  E-value=0.094  Score=38.98  Aligned_cols=29  Identities=14%  Similarity=0.149  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCC----eEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGH----QVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~----~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|+    +|++.+|++.+
T Consensus         9 G~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~   41 (247)
T 3gt0_A            9 GCGNMGMAMIGGMINKNIVSSNQIICSDLNTAN   41 (247)
T ss_dssp             CCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHH
Confidence            479999999999999998    99999998665

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=90.80  E-value=0.2  Score=39.53  Aligned_cols=89  Identities=13%  Similarity=0.118  Sum_probs=53.9

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC--HHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+.. .|.+|+++++++.+... +.          ..+...+ .|..+  .+.+.++ ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~-~~----------~lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW-VK----------SLGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH-HH----------HTTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-HH----------HcCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            47899999999888876 58999999987655211 11          1222222 13322  2333333 334799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEE
Q 025908           78 DINGREADEVEPILDALPNLEQFIYC  103 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~  103 (246)
                      ++++.. ......++.++...+++.+
T Consensus       245 d~~g~~-~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHTD-KHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCHH-HHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCch-hhHHHHHHHhcCCCEEEEE
Confidence            998732 2334566777744577755

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	246
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-22
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-21
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	7e-20
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-17
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	8e-15
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-12
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-11
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-09
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-09
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-09
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-09
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	8e-09
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-08
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.003

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 91.4 bits (226), Expect = 3e-22
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 33/267 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
              S++ +Y     +P  ET    P+S +   KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 211 QVFNISGEKYVTFDGLARACAKVTGYC 237
           + F I+     +        A   G  
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGIK 272

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 87.6 bits (216), Expect = 5e-21
 Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 24/260 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPL- 158
           +  VY   D     E+  ++P S +   K  ++ V      + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 219 KYVTFDGLARACAKVTGYCI 238
             +T   L        G   
Sbjct: 246 LELTNRELTGILLDSLGADW 265

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 7e-20
 Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 47/266 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
           S++ VY   ++ P  E      + + P++   +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 211 QVFNISGEKYVTFDGLARACAKVTGY 236
              N+   +  T    A+    + G 
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVGS 257

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 78.6 bits (193), Expect = 1e-17
 Identities = 47/286 (16%), Positives = 81/286 (28%), Gaps = 52/286 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
                 +F + S+  VY         E     P                 K +++ ++  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCW 242
           RA   V+   KA  + +NI G        +      +    +    
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT 285

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 70.2 bits (170), Expect = 8e-15
 Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                + K++ +  +       ++G+ +T +      G   +                + 
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +  +       ++ + L     K   
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (170), Expect = 1e-14
 Identities = 41/275 (14%), Positives = 82/275 (29%), Gaps = 34/275 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
           F   S++ +Y K   +P  ET    P+S +   KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP- 246

Query: 210 RQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS 244
            + F I+  +  +            G  I     +
Sbjct: 247 -EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN 280

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 65.6 bits (158), Expect = 3e-13
 Identities = 22/240 (9%), Positives = 62/240 (25%), Gaps = 15/240 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
             E            K      +E+  + +T +      G      + +   H +     
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKVTG 235
           + I G G          D+    ++ + + +   + ++       ++   + +   +++ 
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 65.4 bits (158), Expect = 5e-13
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D    +            +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
           +  Y     LP  E     P S     ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
               Y  V   +   +  G  + I G G       ++++  +A +        A  QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 215 ISGEKYVTFDGLARACAKVTG 235
           I+     + + L  A      
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 1e-12
 Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
               ++     +    VL   G+ + ++ P                  +   G    +  
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
            G   +++    DL    ++ L  ++        S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.0 bits (149), Expect = 6e-12
 Identities = 32/239 (13%), Positives = 64/239 (26%), Gaps = 18/239 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
                  +               +   + I       +      +   Y+ S +  H   
Sbjct: 61  NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
                      K   E+ +   G+  T +            P   +    +  G      
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P    I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++   
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALN 235

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 59.1 bits (142), Expect = 5e-11
 Identities = 49/282 (17%), Positives = 86/282 (30%), Gaps = 72/282 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
             S+ +Y K    P  E++ +              K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKVTGY 236
           +                  N+      T   LA+  AKV GY
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY 265

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.6 bits (130), Expect = 2e-09
 Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 36/263 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
             V+ ++       V                     ++G     +   +       +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
            S++ ++         E     P+S +      G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 213 FNISGEKYVTFDGLARACAKVTG 235
           + ++     T   + +   +  G
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVG 262

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 53.8 bits (128), Expect = 4e-09
 Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 55/285 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
           I+ SSA VY     +P+ E+                  ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKVTGYCI 238
           A   V  +          ++N+      +   +  A +K  G  +
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV 284

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.9 bits (125), Expect = 5e-09
 Identities = 29/251 (11%), Positives = 60/251 (23%), Gaps = 27/251 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
           D +    SA           +         D                   +         
Sbjct: 70  DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129

Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
           V       P    + +   +    K   E  L   G  +T +R   +         E   
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY---VTFD 224
              L       +      V       D+A   +Q L  E+A  + F++  +         
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 239

Query: 225 GLARACAKVTG 235
                 ++VT 
Sbjct: 240 DFKALFSQVTS 250

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.4 bits (127), Expect = 5e-09
 Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 28/260 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
           D V +  +  G       N         +          +  +++F Y SSA        
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
           +   +  L   +    +P+      KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 217 GEKYVTFDGLARACAKVTGY 236
            ++ V+ + +A         
Sbjct: 259 SDEMVSMNEMAEMVLSFEEK 278

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.8 bits (125), Expect = 8e-09
 Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
              ++  +     D VY++                            E            
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
              Y + +     S   P  ET    P+S +          T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 209 SRQVFN 214
              V  
Sbjct: 248 DDYVVA 253

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 51.7 bits (122), Expect = 2e-08
 Identities = 46/291 (15%), Positives = 87/291 (29%), Gaps = 65/291 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
             IY S+  VY   +   + ET+T           +  + L                   
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKVTGY 236
           + H +D+   +   L N    R        +    ++   L +        
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 288

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 51.1 bits (121), Expect = 3e-08
 Identities = 45/270 (16%), Positives = 73/270 (27%), Gaps = 37/270 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
           + V    +     V Y   +  +    +P      N                     S+ 
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
            VY    L+ DL  H              +P S +   K  ++ ++     S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 209 SRQVFNISGEKYVTFDGLARACAKVTGYCI 238
                  +  +    + L     K+     
Sbjct: 245 GETYLIGADGEKNNKEVLELILEKMGQPKD 274

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 45/293 (15%), Positives = 83/293 (28%), Gaps = 63/293 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
           ++ SSA VY  +    +++P  E   + P + +   K   E++L        K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKVTGYCI 238
                 G+  A +            + +N+   K  T   +  A  K +G  +
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 293

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F     +    + 
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
                                G E          L + E           L S       
Sbjct: 81  HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
           ++ +  + + +       V E K   ++  RP  +      +   EW   +         
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                       V  + RA +  +      +Q+  +  +       L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++                  +  
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +  S+      +   I    ++E    +D    L         G      +       
Sbjct: 57  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
                         +++ E      T  RP  ++GP     + E     +       I  
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
                       DLARA  ++   E    +  
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 45/284 (15%), Positives = 81/284 (28%), Gaps = 47/284 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
           D   ++       F  V     +        +P+     NL   I             L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
              + TV    ++                 K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI 238
           +  +       E+   +++N+      +   + +A  K +G  I
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 3e-04
 Identities = 25/277 (9%), Positives = 63/277 (22%), Gaps = 50/277 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
                 +           V   + +  + V P +    N  +                + 
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
           + +  K ++      +                             K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
                +           I+ P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
              +  L   +  R+    +   +  ++ +     K+
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL 289

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 26/246 (10%), Positives = 67/246 (27%), Gaps = 16/246 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I               +      K +    
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
               +++                        A     + +  S+  V+      P  E D
Sbjct: 59  CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118

Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
                 +  K KL  E+ +++    +  +R  ++YG  N          +      +   
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAG 240
             G   + +   +      V +   ++ +   F+ + +   ++   A    ++TG  +  
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKV 232

Query: 241 CWISGA 246
              +  
Sbjct: 233 TPCTTE 238

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.4 bits (82), Expect = 0.002
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T F G +LS  L   G  V  ++     +          E A  +  +    GD +D 
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68

Query: 62 DFV 64
          + +
Sbjct: 69 NKL 71

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 35.7 bits (80), Expect = 0.003
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T  +G  L R L   G+ + L    K                          GD  + 
Sbjct: 7  GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43

Query: 62 DFVKSSLSAKGFDVVYDIN 80
            V  ++     DV+ +  
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	246
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.98
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.98
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.92
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.91
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.87
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.67
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.66
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.65
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.65
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.64
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.64
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.63
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.63
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.63
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.62
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.61
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.61
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.61
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.6
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.6
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.6
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.58
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.58
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.57
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.57
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.57
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.57
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.57
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.57
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.57
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.57
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.56
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.56
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.56
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.55
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.55
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.53
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.53
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.51
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.5
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.49
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.48
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.47
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.47
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.46
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.46
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.43
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.41
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.39
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.39
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.36
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.33
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.33
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.3
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.29
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.24
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.24
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.24
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.2
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.18
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.17
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.14
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.09
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.08
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.05
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.99
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.88
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.84
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.64
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.86
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.71
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.36
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.24
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.21
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.14
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.02
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.9
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.74
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.63
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.57
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.57
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.5
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.36
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.26
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.23
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.08
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.01
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.93
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.93
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.78
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.43
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.31
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.3
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.03
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.03
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.0
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.99
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.97
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	94.67
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.55
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.49
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.49
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.46
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.34
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	93.84
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.77
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.71
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	93.4
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.17
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.17
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	93.12
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.08
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.89
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	92.71
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.67
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.54
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.46
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.36
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.34
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	92.26
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.13
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.08
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	91.97
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.83
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	91.69
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	91.66
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.55
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	91.54
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	91.45
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.28
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.15
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.07
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.01
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	90.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	90.58
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.53
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	90.3
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	90.23
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.08
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	89.98
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.62
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.56
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	89.4
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.15
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	89.1
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.04
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	88.96
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.61
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.53
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	88.06
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.06
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	87.84
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	87.66
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.52
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	87.52
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.5
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	87.18
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.15
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	87.1
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	87.04
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	86.84
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.67
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	86.3
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	86.3
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.15
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.4
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	84.77
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.71
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	84.27
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	84.14
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	83.91
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.47
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	83.47
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	83.08
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	82.48
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	82.21
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	81.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	81.46
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.13
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	80.8
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	80.63
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	80.53
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	80.48
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	80.47
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	80.4
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	80.31
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.24

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-38  Score=252.27  Aligned_cols=236  Identities=19%  Similarity=0.166  Sum_probs=182.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|++.|++|++++|..+... ..+.... ........+++++.+|+.|.+++.+++++.++|+|||+
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~   85 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHH-hhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEe
Confidence            799999999999999999999999999754311 1111000 00111246899999999999999999997788999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      |+..                +.++.+++++|+     +.++|||+||..+||.....+++|+++..|.+.| .+|..+|+
T Consensus        86 aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~  165 (357)
T d1db3a_          86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (357)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence            8762                335788898875     4458999999999998777889999999999888 99999998


Q ss_pred             HHH----hcCCceEEeecceeeCCCCCCc----hHHHHHHHHHhCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      +++    +.+++++++||+++|||.....    .+..++.....+. ....++++.+.++++|++|+++++..+++++  
T Consensus       166 ~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--  243 (357)
T d1db3a_         166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--  243 (357)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--
T ss_pred             HHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--
Confidence            875    4689999999999999964332    2233344444444 3445688889999999999999999998765  


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      .++.||+++++.+|+.++++.+.+.+|...+
T Consensus       244 ~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~  274 (357)
T d1db3a_         244 QPEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (357)
T ss_dssp             SCCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             CCCeEEECCCCceehHHHHHHHHHHhCCccc
Confidence            4579999999999999999999999986543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.5e-36  Score=237.75  Aligned_cols=231  Identities=20%  Similarity=0.308  Sum_probs=192.8

Q ss_pred             CCccccchHHHHHHHHHCCCeE------EEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQV------TLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V------~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   73 (246)
                      ||||||||++|++.|+++|++|      +.+++...... ..+..      .....+++++.+|..+.........  .+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~--~~   77 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP------VDADPRLRFVHGDIRDAGLLARELR--GV   77 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG------GTTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhh------hhcCCCeEEEEeccccchhhhcccc--cc
Confidence            7999999999999999998754      44443322211 00000      0113689999999999988887776  99


Q ss_pred             cEEEecCCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHH
Q 025908           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (246)
Q Consensus        74 d~vi~~~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (246)
                      |.|+|+|+..                ..++.+++++|.  ++++||++||..+||.....+++|+++..|.+.| .+|..
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            9999999763                345788999987  7899999999999998888889999999999888 99999


Q ss_pred             HHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       135 ~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +|.+++    +++++++++||+.+|||++. ..+++.++.++..++++.+++++.+.++++|++|+|+++..+++++. .
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~  236 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-C
Confidence            998874    56899999999999999854 45778888999999999988999999999999999999999998775 4


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                      +++||+++++++++.|+++.+.+.+|.+.+.
T Consensus       237 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~  267 (322)
T d1r6da_         237 GEIYHIGGGLELTNRELTGILLDSLGADWSS  267 (322)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGG
T ss_pred             CCeeEEeecccchhHHHHHHHHHHhCCCccc
Confidence            6799999999999999999999999987553

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-37  Score=238.82  Aligned_cols=229  Identities=20%  Similarity=0.269  Sum_probs=180.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|++|++.|+++|++|++++|........+...      .....+.+...|..     ..++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~------~~~~~~d~~~~~~~-----~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDVV-----EPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG------TTCTTEEEEECCTT-----SCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh------cCCCceEEEehHHH-----HHHHc--CCCEEEECc
Confidence            799999999999999999999999988554433222210      00234555555543     34454  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCC-----CCCCCCCcc-ccHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~e~  137 (246)
                      +..                +.++.+++++|+ ...++||+||..+|+.....+.+|+     .+..|.+.| .+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            862                225778999988 3348999999999997665555554     455677777 99999999


Q ss_pred             HHH----hcCCceEEeecceeeCCCCC---CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      +++    +++++++++||+.+|||+..   ..+++.++..+..++++.+++++.+.++++|++|+++++..+++..  .+
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VS  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CC
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--cC
Confidence            884    56999999999999999743   3467788889999999998899999999999999999999998765  35


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++||+++++.+++.++++.+++.+|.+.++.+.+
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS  265 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCCceEECC
Confidence            6999999999999999999999999887766544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=6.5e-35  Score=230.14  Aligned_cols=235  Identities=20%  Similarity=0.187  Sum_probs=192.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|++.|++|++++|........+.............+++++.+|..|...+.....  +++.++|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999998554321111000000001113679999999999988887776  899999998


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (246)
                      +..                +.++.+++++|.  ++++||++||..+||.....+.+|+.+..|.+.| .+|..+|++++ 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            752                346888999987  7889999999999998888899999999999988 99999998874 


Q ss_pred             ---hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-CCCCe
Q 025908          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASRQ  211 (246)
Q Consensus       141 ---~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~  211 (246)
                         +.+++++++||+.+|||+..     ..++..++..+..++++.+++++.+.++++|++|++.++..++... ...++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               46899999999999998632     3466778888889999999999999999999999999999988764 34578


Q ss_pred             eEEeeCCeeecHHHHHHHHHHHhCCC
Q 025908          212 VFNISGEKYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       212 ~~~~~~~~~~s~~~l~~~~~~~~g~~  237 (246)
                      +|++++++..|+.++++.+.+.++.+
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAEN  285 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred             eeeecccccchHHHHHHHHHHHhccc
Confidence            99999999999999999999998754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.7e-34  Score=229.09  Aligned_cols=228  Identities=20%  Similarity=0.224  Sum_probs=182.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc--cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|++.|++|++..++.....  ..+....      ...+++++.+|++|.+.+.++++..++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS------ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh------hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999997655444322211  1111110      03689999999999999999998778999999


Q ss_pred             cCCCCc----------------cchHHHHHhCC-----------CCceEEEEeecceeccCCCC----------CCCCCC
Q 025908           79 INGREA----------------DEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLL----------PHCETD  121 (246)
Q Consensus        79 ~~~~~~----------------~~~~~l~~a~~-----------~~~~~i~~Ss~~v~~~~~~~----------~~~e~~  121 (246)
                      +|+...                .++.+++++|.           ++++||++||..+||.....          ...|..
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            998632                24667887764           24699999999999854322          223555


Q ss_pred             CCCCCCcc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      +..|.+.| .+|..+|.+++    +.+++++++||+++|||++. ..+++.++..+.+++++.+++++++.++|+|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            66777777 99999999885    47899999999999999754 45678888999999999888999999999999999


Q ss_pred             HHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      |+++..+++++. .+++||+++++.++..++++.+.+.++
T Consensus       240 a~ai~~~~~~~~-~~~~~Ni~s~~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-CCCeEEECCCCCcchHHHHhHhhhhcc
Confidence            999999998765 367999999999999999999988764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-33  Score=220.40  Aligned_cols=238  Identities=17%  Similarity=0.137  Sum_probs=185.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++||+|++++|..+... ..+.............+++++.+|+.|.+.+..++.+.++++++|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            799999999999999999999999999765421 1111111111112236889999999999999999987889999999


Q ss_pred             CCCC----------------ccchHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      ++..                +.++.+++++++     +.++||++||..+||.....+++|+++..|.+.| .+|..+|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            8753                235677888764     4468999999999998777789999999999888 99999999


Q ss_pred             HHH----hcCCceEEeecceeeCCCCCCch-----HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       138 ~~~----~~~~~~~ilR~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      ++.    +.+++++++||+.+|||......     ...+........++..++++.+.++++|++|+++++..++++.. 
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-  245 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  245 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence            874    46899999999999999643322     22233444455666777888999999999999999999998764 


Q ss_pred             CCeeEEeeCCeeecHHHHHHHHHHHhCCCcce
Q 025908          209 SRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (246)
Q Consensus       209 ~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~  240 (246)
                       .+.|+++.....++.++...+...++..+..
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (347)
T d1t2aa_         246 -PEDFVIATGEVHSVREFVEKSFLHIGKTIVW  276 (347)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCEEE
T ss_pred             -Cccceeccccccccchhhhhhhhhhcceeee
Confidence             3578888888899999999999999876543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.8e-33  Score=218.21  Aligned_cols=239  Identities=22%  Similarity=0.291  Sum_probs=183.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++|++|++++|........+.     ... ....+++++++|++|.+.+.++++..++|+|||+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH-----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH-----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            7999999999999999999999999875444211110     000 1136899999999999999999987789999999


Q ss_pred             CCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCC-CCCCCcc-ccHHHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~~~~~~-~~k~~~e~~~  139 (246)
                      |+..                +.++.+++++|+  ++++||++||..+|+.....+..|..+ ..|...| .+|..+|+++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            9863                235788999987  899999999999998766555555543 4567666 9999999987


Q ss_pred             Hh-----cCCceEEeecceeeCCCCC-----------CchHHHHHHHHHhC-CCcccCC------CCCceeeeeeHHHHH
Q 025908          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLA  196 (246)
Q Consensus       140 ~~-----~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a  196 (246)
                      .+     .+++++++|++++|||...           ..++..++..+... .++.+.+      ++.+.++++|+.|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            53     5799999999999998532           22444555544433 3444433      467789999999999


Q ss_pred             HHHHHHhc--CCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          197 RAFVQVLG--NEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       197 ~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++...+..  .....+++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~  290 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECC
Confidence            88877664  2333567999999999999999999999999887776554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.6e-33  Score=221.87  Aligned_cols=229  Identities=18%  Similarity=0.222  Sum_probs=182.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++||+|++++|.........           ....++..+|+.+.+.+..+++  ++|+|||++
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999988655421111           2566888999999999999887  999999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCceEEEEeecceeccCCCCCC-------CCCCCCCCCCcc-ccHH
Q 025908           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPH-------CETDTVDPKSRH-KGKL  133 (246)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~-------~e~~~~~~~~~~-~~k~  133 (246)
                      +...                 .++.++++++.  ++++||++||..+|+.....+.       .+..+..|.+.| .+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            7632                 24677888876  8899999999999986544333       344456777777 9999


Q ss_pred             HHHHHHH----hcCCceEEeecceeeCCCCCC-----c-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       134 ~~e~~~~----~~~~~~~ilR~~~i~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      .+|++++    +.+++++++||+.+|||.+..     . .................++++.+.++++|++|+++++..++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9999874    468999999999999986421     1 22233334444555667788899999999999999999999


Q ss_pred             cCCCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +.+  .+++||+++++.+++.++++++.+.+|.+.++..+|
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~  286 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP  286 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCC
Confidence            765  357999999999999999999999999887776654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.5e-32  Score=214.85  Aligned_cols=231  Identities=18%  Similarity=0.152  Sum_probs=185.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++||+|++++|..+.... .+      +.....++++++.+|+.|.+.+.+.+....+++++|+
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL------RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH------HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH------HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            7999999999999999999999999998654211 00      0001146899999999999999999987788999998


Q ss_pred             CCCC----------------ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           80 NGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        80 ~~~~----------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      ++..                ..++.+++++|+  + .++|++.||..+|+.....+.+|+.+..|.+.| .+|..+|+++
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence            8752                335778888876  4 568999999999988877888899999999988 9999999987


Q ss_pred             H----hcCCceEEeecceeeCCCCCCch----HHHHHHHHHhC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCC
Q 025908          140 E----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (246)
Q Consensus       140 ~----~~~~~~~ilR~~~i~g~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (246)
                      .    +.+++++++||+++|||......    +..++.+...+ .+...++++.+.++++|++|+|+++..+++++.  +
T Consensus       160 ~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~  237 (321)
T d1rpna_         160 VNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--A  237 (321)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--C
T ss_pred             HHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--c
Confidence            4    47899999999999999643322    22333444444 344456888999999999999999999998764  4


Q ss_pred             eeEEeeCCeeecHHHHHHHHHHHhCCCcc
Q 025908          211 QVFNISGEKYVTFDGLARACAKVTGYCIA  239 (246)
Q Consensus       211 ~~~~~~~~~~~s~~~l~~~~~~~~g~~~~  239 (246)
                      +.||+++++..++.++++.+.+.+|.+.+
T Consensus       238 ~~~ni~~~~~~s~~~~~~~~~~~~~~~~~  266 (321)
T d1rpna_         238 DDYVVATGVTTTVRDMCQIAFEHVGLDYR  266 (321)
T ss_dssp             CCEEECCSCEEEHHHHHHHHHHTTTCCGG
T ss_pred             CCceecccccceehhhhHHHHHHhCCCcc
Confidence            68999999999999999999999987643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-32  Score=216.01  Aligned_cols=230  Identities=19%  Similarity=0.204  Sum_probs=182.2

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHH-hhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|+++| ++|+++++..........          .++++++.+|+++.+++.+ +++  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999999 589999887665333333          4789999999987766555 554  8999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCC-------CCCCCCcc-ccHH
Q 025908           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-------TVDPKSRH-KGKL  133 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-------~~~~~~~~-~~k~  133 (246)
                      +|+..                +.++.+++++|. ...++++.||..+|+........|..       ...|...| .+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99863                345788999887 55677899999999876554444432       23455556 8999


Q ss_pred             HHHHHHH----hcCCceEEeecceeeCCCCC---------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       134 ~~e~~~~----~~~~~~~ilR~~~i~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|+++.    +.+++++++|++.+|||...         ......++..+..++++.+++++.+.++++|++|+|+++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9999874    46899999999999998521         2245677888889999998999999999999999999999


Q ss_pred             HHhcCC--CCCCeeEEeeCCe-eecHHHHHHHHHHHhCCCcceee
Q 025908          201 QVLGNE--KASRQVFNISGEK-YVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~-~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      .+++++  ...+++||+++++ .+|+.|+++.+.+.+|.......
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~  278 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH  278 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccc
Confidence            999874  3357899998764 58999999999999987655433

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.2e-32  Score=215.95  Aligned_cols=231  Identities=17%  Similarity=0.147  Sum_probs=184.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|.++.++...........    ......+++++.+|+.|.+.+.+++.  +++.|+|+|
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~a   81 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAILGDRVELVVGDIADAELVDKLAA--KADAIVHYA   81 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----HHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhhh
Confidence            799999999999999999998777766532211000000    00013689999999999999999998  899999998


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccC------------CCCCCCCCCCCCCCCcc-c
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~------------~~~~~~e~~~~~~~~~~-~  130 (246)
                      +..                ..++.++++++. ...++|++||..+||..            .....+|.++..|.+.| .
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~  161 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS  161 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHH
Confidence            763                335778888877 44689999999999732            12345666777888877 9


Q ss_pred             cHHHHHHHHH----hcCCceEEeecceeeCCCCC-CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      +|..+|.+++    +.+++++++||+.+|||... ...+..++.....+..+.+++++.+.++++|++|+|++++.++.+
T Consensus       162 sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         162 TKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence            9999998874    46899999999999999753 456667777788888888889999999999999999999999887


Q ss_pred             CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      +. .++.|++++++..++.++++.+.+.++.+.
T Consensus       242 ~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         242 GR-MGETYLIGADGEKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             CC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             cc-cCccccccccccccchHHHHHHHHHhCCCC
Confidence            65 467999999999999999999999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=1.7e-30  Score=204.49  Aligned_cols=235  Identities=16%  Similarity=0.117  Sum_probs=175.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccc-cCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||||++|++.|+++||+|++++|..+... ..+..............++++.+|+.+.+.+.+.++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            799999999999999999999999999765321 1111111111111136788999999999999999987789999999


Q ss_pred             CCCCc----------------cchHHHHHhCC-------CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHH
Q 025908           80 NGREA----------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (246)
Q Consensus        80 ~~~~~----------------~~~~~l~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (246)
                      |+...                .++.+++++++       ...++++.||..+|+... .+.+|+.+..|.+.| .+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhhHHHHHH
Confidence            98732                23555666653       345788888887776544 468899999999988 999999


Q ss_pred             HHHH----HhcCCceEEeecceeeCCCCCCchHHH----HHHH-HHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       136 e~~~----~~~~~~~~ilR~~~i~g~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      |+++    ++.+++++++||+++|||.........    .+.. ........+.+++.+.++++|++|+|+++..++.++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9876    457899999999999999744332221    2222 233344555678889999999999999999999887


Q ss_pred             CCCCeeEEeeCCeeecHHHHHHHHHHHhCCCc
Q 025908          207 KASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (246)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~  238 (246)
                      ..  ..+++..+...+..++++.+.+.+|...
T Consensus       246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             SC--CEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             CC--Cccccccccccccchhhhhhhhhhhccc
Confidence            53  4566777788999999999999998764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=5.2e-31  Score=208.10  Aligned_cols=238  Identities=19%  Similarity=0.209  Sum_probs=177.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|..........    ........+++++.+|+.|.+.+..+++..++|+|||+|
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            7999999999999999999999999875443211100    000111368999999999999999999878999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCC----CCCCCCCCCCCCCCcc-ccHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES  137 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~e~  137 (246)
                      +..                ..++.+++++|+  ++++||++||..+||...    ..+.+|+.+..|.+.| .+|..+|+
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence            863                235678888887  889999999999998543    3557788888888877 99999999


Q ss_pred             HHHh------cCCceEEeecceeeCCCCC-----------CchHHHHHHHHH-hCCCcccCCCC------CceeeeeeHH
Q 025908          138 VLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPGSG------IQVTQLGHVK  193 (246)
Q Consensus       138 ~~~~------~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~i~~~  193 (246)
                      +++.      .+++++++|++.+||+...           ..++..++.... ...++.+++++      ...++++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~  242 (347)
T d1z45a2         163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV  242 (347)
T ss_dssp             HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence            8743      4789999999999986421           123444444433 23455555544      3467788888


Q ss_pred             HHHHHHHHHhcC------CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceee
Q 025908          194 DLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCW  242 (246)
Q Consensus       194 D~a~~~~~~~~~------~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~  242 (246)
                      |.+.++..+++.      ....+++||+++++++|+.|+++.+.+.+|.+.+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~  297 (347)
T d1z45a2         243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV  297 (347)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--
T ss_pred             cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEe
Confidence            888888877642      2234689999999999999999999999998876543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=4e-31  Score=202.84  Aligned_cols=212  Identities=18%  Similarity=0.162  Sum_probs=179.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|.++||+|++++|+.                          +|+.|.+.+.++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998742                          3778999999999877899999999


Q ss_pred             CCCcc----------------chHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~~~----------------~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +....                ....+.+.+. ....+++.|+..+|+.....+..|.++..|...| ..|...|+++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87432                1223444444 5678899999999998888888999998888887 8999999999999


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeCCeeec
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (246)
                      +.+++++||+++||++.  ++...++..+.++..+.+.+  ++.+++++++|+++++..++++..  .++||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGN--NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSSS--CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCCc--ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence            99999999999999963  45666777777887776655  478999999999999999998764  3699999999999


Q ss_pred             HHHHHHHHHHHhCCCcceeecC
Q 025908          223 FDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       223 ~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      +.|+++.+++.+|.+.++.++|
T Consensus       215 ~~e~~~~i~~~~g~~~~i~~i~  236 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDVKVTPCT  236 (281)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEEC
T ss_pred             hHHHHHHHHHHhCCCceEEecc
Confidence            9999999999999988877665

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.4e-30  Score=200.78  Aligned_cols=244  Identities=18%  Similarity=0.184  Sum_probs=179.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCc-hhhh-hhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||||++|++.|++.|++|++++|.............. .... ....++.++.+|++|.+.+.+++...++++++|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            79999999999999999999999998754432211111000 1111 124689999999999999999998788999999


Q ss_pred             cCCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCC-CCCCCCcc-ccHHHHHHH
Q 025908           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV  138 (246)
Q Consensus        79 ~~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~  138 (246)
                      +|+..                +.++.+++++++  ++++|+++||..+|+........+.. ...+.+.| .+|..+|+.
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99863                235678888877  89999999999999876544433333 34455556 899999987


Q ss_pred             HHh-----cCCceEEeecceeeCCCCC-----------CchHHHHHHHHH-hCCCcccC------CCCCceeeeeeHHHH
Q 025908          139 LES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDL  195 (246)
Q Consensus       139 ~~~-----~~~~~~ilR~~~i~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~  195 (246)
                      +++     .+++++++|++.+|||...           ......++..+. ++.++.+.      .++.+.++++|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            642     5899999999999998531           223444444333 23333332      346678999999999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      |.++..++..  ....+++||+++++.+++.|+++.+.+.+|.+.+..+.|
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~  298 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA  298 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECC
Confidence            9998887533  333567999999999999999999999999887766554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=4e-30  Score=206.25  Aligned_cols=233  Identities=16%  Similarity=0.173  Sum_probs=172.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcc------ccCCCCCCc-----hhhh-hhcCceEEEEccCCCHHHHHHhh
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI------AQQLPGESD-----QEFA-EFSSKILHLKGDRKDYDFVKSSL   68 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~------~~~~~~~~~-----~~~~-~~~~~v~~~~~D~~~~~~~~~~~   68 (246)
                      ||||||||++|++.|++.||+|++++.-..+.      ...+.....     .... ....+++++.+|+.|.+.+.+++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            79999999999999999999999986311000      000110000     0011 11367999999999999999999


Q ss_pred             hcCCccEEEecCCCC-------------------ccchHHHHHhCC--C-CceEEEEeecceeccCCCCCCC--------
Q 025908           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHC--------  118 (246)
Q Consensus        69 ~~~~~d~vi~~~~~~-------------------~~~~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~--------  118 (246)
                      +..++|+|||+|+..                   +.++.+++++|+  + .+++++.||..+|+.... +..        
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~  165 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH  165 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence            877899999999752                   235778888877  4 456788888877764321 111        


Q ss_pred             ------CCCCCCCCCcc-ccHHHHHHHH----HhcCCceEEeecceeeCCCCC------------------CchHHHHHH
Q 025908          119 ------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (246)
Q Consensus       119 ------e~~~~~~~~~~-~~k~~~e~~~----~~~~~~~~ilR~~~i~g~~~~------------------~~~~~~~~~  169 (246)
                            +..+..|.+.| .+|..+|.++    ++.+++++++||+++|||...                  ...+..++.
T Consensus       166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  245 (393)
T d1i24a_         166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  245 (393)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence                  12345677767 9999999887    467999999999999998632                  124567778


Q ss_pred             HHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEe-eCCeeecHHHHHHHHHHHh
Q 025908          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKVT  234 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~l~~~~~~~~  234 (246)
                      ....++++.+++++.+.++|+|++|+++++..+++++...+..+.+ .+++.+|+.++++++.+..
T Consensus       246 ~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~  311 (393)
T d1i24a_         246 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAG  311 (393)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred             HhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHH
Confidence            8888999999999999999999999999999999877655543333 4557899999999998875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.7e-30  Score=199.14  Aligned_cols=218  Identities=20%  Similarity=0.264  Sum_probs=172.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|+.|+++.+..                         ..|+.+.+.+.++++..++|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            79999999999999999999988765432                         13788899999999877899999998


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCC-----CCCcc-ccHHHH
Q 025908           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-----PKSRH-KGKLNT  135 (246)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-----~~~~~-~~k~~~  135 (246)
                      +..                 +.++.+++++|.  ++++|||+||.++||.....+.+|+.+..     |.+.| .+|.++
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            652                 235778888886  88999999999999987777777765432     23335 999999


Q ss_pred             HHHHH----hcCCceEEeecceeeCCCCCC-----chHH-----HHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       136 e~~~~----~~~~~~~ilR~~~i~g~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                      |++++    +.+++++++||+.+|||++..     ....     ........+..+...+++.+.+++++++|+++++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997431     1222     223444556777778888899999999999999999


Q ss_pred             HhcCCC--------CCCeeEEeeCCeeecHHHHHHHHHHHhCCCcceeec
Q 025908          202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKVTGYCIAGCWI  243 (246)
Q Consensus       202 ~~~~~~--------~~~~~~~~~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (246)
                      ++.+..        .....++++.+...+..++++.+.+.+|.+..+.+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~  272 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD  272 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEEC
Confidence            886532        234688999999999999999999999988766543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.97  E-value=3.9e-29  Score=199.79  Aligned_cols=243  Identities=21%  Similarity=0.240  Sum_probs=176.4

Q ss_pred             CCccccchHHHHHHHHH-CCCeEEEEecCCCccccCCCCCC-c-----------hhhhhhcCceEEEEccCCCHHHHHHh
Q 025908            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGES-D-----------QEFAEFSSKILHLKGDRKDYDFVKSS   67 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~-~-----------~~~~~~~~~v~~~~~D~~~~~~~~~~   67 (246)
                      ||||||||++|+++|++ .|++|+++++-............ +           .........+.++.+|+.|.+.+.++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999996 68999999752221100000000 0           00001135688999999999999999


Q ss_pred             hhcC-CccEEEecCCCC----------------ccchHHHHHhCC--CCceEEEEeecceeccCC-------CCCCCCCC
Q 025908           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (246)
Q Consensus        68 ~~~~-~~d~vi~~~~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~  121 (246)
                      +++. ++|+|||+|+..                ..++.+++++++  ++++++++|+..+|+...       ..+..|+.
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            9754 579999999863                234677888876  889999999999987432       34566777


Q ss_pred             CCCCCCcc-ccHHHHHHHHH----hcCCceEEeecceeeCCCCCC----------chHHHHHHHHH--------------
Q 025908          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  172 (246)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~ilR~~~i~g~~~~~----------~~~~~~~~~~~--------------  172 (246)
                      +..|.+.| .+|...|++++    ..+++++++|++++|||....          ...+.++..+.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence            78888877 99999999885    368999999999999987432          12233322221              


Q ss_pred             --hCCCcccC------CCCCceeeeeeHHHHHHHHHHHhcC--------CCCCCeeEEeeCCeeecHHHHHHHHHHHhCC
Q 025908          173 --AGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLGN--------EKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (246)
Q Consensus       173 --~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~~~--------~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g~  236 (246)
                        .+.++.++      +++.+.++++|++|+|++++.+++.        ....+++||+++++++++.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              12223332      3467788999999999999998853        1224579999999999999999999999998


Q ss_pred             Ccceeec
Q 025908          237 CIAGCWI  243 (246)
Q Consensus       237 ~~~~~~~  243 (246)
                      +.+....
T Consensus       328 ~~~~~~~  334 (383)
T d1gy8a_         328 PIPVREC  334 (383)
T ss_dssp             CCCEEEE
T ss_pred             CCceEEC
Confidence            8776543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.2e-29  Score=182.22  Aligned_cols=184  Identities=16%  Similarity=0.209  Sum_probs=145.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||||++|++++++|+++||+|++++|++.+.....           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            699999999999999999999999999987743322           2689999999999999999998  999999998


Q ss_pred             CCCc---------cchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEe
Q 025908           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (246)
Q Consensus        81 ~~~~---------~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~il  149 (246)
                      +...         .++++++++++  +++|||++||.++++.....      +.....++..|..+|+++++.+++|+++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~~~~~~~~~~~~~~e~~l~~~~~~~tii  149 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHKVLRESGLKYVAV  149 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------cccccccchHHHHHHHHHHhcCCceEEE
Confidence            8642         24678899887  89999999998886543221      1111123478889999999999999999


Q ss_pred             ecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC
Q 025908          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (246)
Q Consensus       150 R~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  217 (246)
                      ||+.+++....              ....+..++..+..+|+.+|+|++++.+++++...++.+.++.
T Consensus       150 rp~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         150 MPPHIGDQPLT--------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCSEEECCCCC--------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ecceecCCCCc--------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            99999875321              1123334556677899999999999999998877777776654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.96  E-value=1.8e-28  Score=192.62  Aligned_cols=239  Identities=19%  Similarity=0.261  Sum_probs=174.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|+++++-.......     .........+++++.+|+.+.+.+.+++++.++|+|||+|
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999987643331100     0001111468999999999999999999877889999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCceEEEEeecceecc-CCCC----------------CCCCCCCCCC
Q 025908           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLL----------------PHCETDTVDP  125 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~-~~~~----------------~~~e~~~~~~  125 (246)
                      +..                +.++.++++++.  +++++++.||..++.. ....                ...+..+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            863                346788999877  6777666666555433 2111                1223334445


Q ss_pred             CCcc-ccHHHHHHHH----HhcCCceEEeecceeeCCCCC----CchHHHHHHHHH-----hCCCcccCCCCCceeeeee
Q 025908          126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~----~~~~~~~~ilR~~~i~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  191 (246)
                      .+.| .+|...|.++    +..++...++|++.+|++...    ......++..+.     .++++.+++++.+.++++|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            5555 7788888765    457899999999999986532    223444544443     2567888899999999999


Q ss_pred             HHHHHHHHHHHhcCC-CCCCeeEEeeC--CeeecHHHHHHHHHHHhCCCcceeecC
Q 025908          192 VKDLARAFVQVLGNE-KASRQVFNISG--EKYVTFDGLARACAKVTGYCIAGCWIS  244 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~-~~~~~~~~~~~--~~~~s~~~l~~~~~~~~g~~~~~~~~p  244 (246)
                      ++|++++++.++++. ...+++|++..  +..+++.|+++.+.+.+|.+.+....|
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~  296 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP  296 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCC
Confidence            999999999999764 33567898854  567999999999999999887765544

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=4.6e-29  Score=193.84  Aligned_cols=231  Identities=13%  Similarity=0.113  Sum_probs=172.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||+|++|+++|+++||+|++++|+........    ...... ...+++++.+|+.|.+.+.++++  +.++++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~   82 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   82 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH----HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhh
Confidence            799999999999999999999999999765521100    000001 13679999999999999999998  89999998


Q ss_pred             CCC-----CccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhcCCceEEeec
Q 025908           80 NGR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRP  151 (246)
Q Consensus        80 ~~~-----~~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~ilR~  151 (246)
                      ++.     +..+..++++++.  +..++++.|+.+++...      +..+..|...+ ..+..++++.++.+++++++||
T Consensus        83 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~  156 (312)
T d1qyda_          83 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS  156 (312)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred             hhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHHhhcccccceEEecc
Confidence            765     3445677777765  66788888876664322      22333344444 7888888898999999999999


Q ss_pred             ceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCe-eEEeeCCeeecHHHHHHHH
Q 025908          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARAC  230 (246)
Q Consensus       152 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l~~~~  230 (246)
                      +.+||+..... ...+......+..+.+++++++.+++|+++|+|++++.++.++...++ +|++++++.+|++|+++.+
T Consensus       157 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~  235 (312)
T d1qyda_         157 NMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIW  235 (312)
T ss_dssp             CEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHH
T ss_pred             ceeecCCccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHH
Confidence            99999642111 001111122345566778888999999999999999999988766555 4667777889999999999


Q ss_pred             HHHhCCCcceeecC
Q 025908          231 AKVTGYCIAGCWIS  244 (246)
Q Consensus       231 ~~~~g~~~~~~~~p  244 (246)
                      ++.+|.+.+..++|
T Consensus       236 ~~~~g~~~~~~~i~  249 (312)
T d1qyda_         236 ERLSEQNLDKIYIS  249 (312)
T ss_dssp             HHHHTCCCEECCBC
T ss_pred             HHHHCCCCeEEECC
Confidence            99999998877766

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=9.4e-29  Score=194.64  Aligned_cols=228  Identities=14%  Similarity=0.062  Sum_probs=164.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|+..+... +...  ............+.+|+.+.+++.+++.  ++|+|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~-~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQKR--WDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHH--HHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHH-HHHh--hhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            7999999999999999999999999997654211 1000  0000012345567899999999999997  999999998


Q ss_pred             CCC-------------ccchHHHHHhCC---CCceEEEEeecceecc-CC---CCC----------------CCCCCCCC
Q 025908           81 GRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLK-SD---LLP----------------HCETDTVD  124 (246)
Q Consensus        81 ~~~-------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~-~~---~~~----------------~~e~~~~~  124 (246)
                      +..             +.++.+++++|.   ++++|||+||..+++. ..   +..                ..|..+..
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            863             235788898874   6899999999765432 11   111                12333444


Q ss_pred             CCCcc-ccHHHHHHHHH----hc--CCceEEeecceeeCCCC----CCchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          125 PKSRH-KGKLNTESVLE----SK--GVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~----~~--~~~~~ilR~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      |.+.| .+|..+|+++.    ++  +++++++||+.+|||..    .......++..+.++..... ..+.+.++++|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCccceeeeeHH
Confidence            55556 89999998653    33  47788999999999852    23455666777777665443 2344568999999


Q ss_pred             HHHHHHHHHhcCCCCCCeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      |+|++++.+++++...+ .|++++++.+++.|+++++.+.++
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcC
Confidence            99999999998876555 566888899999999999999874

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=4e-29  Score=193.47  Aligned_cols=230  Identities=14%  Similarity=0.182  Sum_probs=170.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh-hcCceEEEEccCCCHHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~   79 (246)
                      ||||||+|+++++.|+++|++|++++|++........   ...... ...+++++.+|+.+.+.+...++  +++.++|+
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~   83 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH---HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeec
Confidence            7999999999999999999999999998765311100   000011 13579999999999999999998  89999999


Q ss_pred             CCCC-ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc-cccHHHHHHHHHhcCCceEEeecceee
Q 025908           80 NGRE-ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIY  155 (246)
Q Consensus        80 ~~~~-~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~-~~~k~~~e~~~~~~~~~~~ilR~~~i~  155 (246)
                      ++.. .....++++++.  +.+++++.|+.....       ++.....+... +..+...+.++++.+++++++||+.+|
T Consensus        84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~  156 (307)
T d1qyca_          84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA  156 (307)
T ss_dssp             CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred             ccccccchhhHHHHHHHHhccccceeeecccccc-------ccccccccccccccccccccchhhccCCCceecccceec
Confidence            8754 455677888766  788888888755421       11122222222 366778888889999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCee-EEeeCCeeecHHHHHHHHHHHh
Q 025908          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVT  234 (246)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~l~~~~~~~~  234 (246)
                      |+....  +..+.....++.....++++++.+++|+++|+|++++.+++++...++. |++++++.+|+.|+++.+.+++
T Consensus       157 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~  234 (307)
T d1qyca_         157 GYFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI  234 (307)
T ss_dssp             HHHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred             CCCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHH
Confidence            975321  1112222334455566688889999999999999999999887666554 5667788999999999999999


Q ss_pred             CCCcceeecC
Q 025908          235 GYCIAGCWIS  244 (246)
Q Consensus       235 g~~~~~~~~p  244 (246)
                      |.+.+..++|
T Consensus       235 G~~~~~~~~~  244 (307)
T d1qyca_         235 DKTLEKAYVP  244 (307)
T ss_dssp             TSCCEEEEEC
T ss_pred             CCCCcEEECC
Confidence            9998877665

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.94  E-value=1.3e-26  Score=183.37  Aligned_cols=234  Identities=14%  Similarity=0.146  Sum_probs=173.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||||++|++.|+++|++|++++|...+....+.      .....++++++.+|++|++.+.++++...+++|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~------~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHh------hhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            7999999999999999999999999998776432111      0111368999999999999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC---CCceEEEEeecceecc-CCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~---~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      +..                +.++.++++++.   ..+.+++.|+..++.. ....+.+++.+..|.+.| .+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            863                235778888876   4455555555544433 344556677777788776 7888888665


Q ss_pred             H-------------hcCCceEEeecceeeCCCCC--CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       140 ~-------------~~~~~~~ilR~~~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      +             ..++.++++||+.+|||++.  ..++..++.....+.+ .+++.+.+.++++|++|++.++..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccccccccchhhhhhh
Confidence            3             35789999999999999853  3455666666655554 456777889999999999999998886


Q ss_pred             CCCC----CCeeE--EeeCCeeecHHHHHHHHHHHhCCCccee
Q 025908          205 NEKA----SRQVF--NISGEKYVTFDGLARACAKVTGYCIAGC  241 (246)
Q Consensus       205 ~~~~----~~~~~--~~~~~~~~s~~~l~~~~~~~~g~~~~~~  241 (246)
                      ++..    .+...  ....+..++..++++.+.+.++.+....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  289 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ  289 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCccEE
Confidence            5322    22233  3334567899999999999999776543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=172.78  Aligned_cols=186  Identities=18%  Similarity=0.183  Sum_probs=140.3

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||+|++|+++|+++|.  +|++++|++.+.....           ...++...+|+.+.+++.++++  ++|++||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999876532211           3678888899999999999998  9999999


Q ss_pred             cCCCC-------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcC
Q 025908           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (246)
Q Consensus        79 ~~~~~-------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~  143 (246)
                      +++..             ...+.+++++|.  ++++||++|+..+++..            +..|.++|..+|+.+++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~------------~~~Y~~~K~~~E~~l~~~~  154 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------NFLYLQVKGEVEAKVEELK  154 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHHHHHHHHHHTTC
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCc------------cchhHHHHHHhhhcccccc
Confidence            99863             224667888876  89999999998875321            1223499999999999988


Q ss_pred             Cc-eEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCCCCeeEEeeC
Q 025908          144 VN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (246)
Q Consensus       144 ~~-~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  217 (246)
                      ++ ++|+||+.+||++........+........     ........+|+++|+|++++.++.++.. ++.+.+.+
T Consensus       155 ~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         155 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             ccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            85 899999999998754443333433333221     2233445689999999999999877754 45666654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.93  E-value=1.1e-25  Score=173.50  Aligned_cols=209  Identities=18%  Similarity=0.169  Sum_probs=163.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      ||||||+|++|++.|.+.|+. +++.++...                      +.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGNL-IALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSEE-EEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCE-EEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            799999999999999998864 445554322                      236899999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHhc
Q 025908           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (246)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (246)
                      +..                ...+.+++++|+ ...+++++||..+|+.....+.+|+.+..|.+.| .+|..+|++++..
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            863                224667888887 5578999999999988888889999999998877 9999999999887


Q ss_pred             CCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CCCCCeeEEeeCCe
Q 025908          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (246)
Q Consensus       143 ~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~~~~~~  219 (246)
                      .....++|++..++... ......+...+.....+...+  ....+++++.|+++++..++..   .....++||+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccC-Cccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            77778888777765433 233444555555666555543  4678999999999999887742   33356899999999


Q ss_pred             eecHHHHHHHHHHHhC
Q 025908          220 YVTFDGLARACAKVTG  235 (246)
Q Consensus       220 ~~s~~~l~~~~~~~~g  235 (246)
                      .++..++++.+.+..+
T Consensus       220 ~~~~~~~~~~i~~~~~  235 (298)
T d1n2sa_         220 TTTWHDYAALVFDEAR  235 (298)
T ss_dssp             CEEHHHHHHHHHHHHH
T ss_pred             ceecHHHHHHHHhhhh
Confidence            9999999998877653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.92  E-value=1.5e-24  Score=170.91  Aligned_cols=225  Identities=12%  Similarity=0.067  Sum_probs=161.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc-CCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|++|++.|+++||+|++++|++++... .+         ....+++++.+|+.|. +.+..++.  +++++++
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~---------~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~   77 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL---------QAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   77 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH---------HTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh---------cccCCCEEEEeeCCCcHHHHHHHhc--CCceEEe
Confidence            7999999999999999999999999998776321 11         1136899999999885 45677776  8888887


Q ss_pred             cCCCC----ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHHHHHHHHHhcCCceEEeecc
Q 025908           79 INGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (246)
Q Consensus        79 ~~~~~----~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~ilR~~  152 (246)
                      .....    .....++++++.  ++++++++||........        ......++.+|...|.++++.+++++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~--------~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~  149 (350)
T d1xgka_          78 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG--------PWPAVPMWAPKFTVENYVRQLGLPSTFVYAG  149 (350)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS--------SCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC
T ss_pred             ecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC--------cccchhhhhhHHHHHHHHHhhccCceeeeec
Confidence            65432    335678899876  888888888865432211        1122234478999999999999999999999


Q ss_pred             eeeCCCCCCchHHHHHHHHHhCC-CcccCCCCCceeeeeeH-HHHHHHHHHHhcCC--CCCCeeEEeeCCeeecHHHHHH
Q 025908          153 YIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNE--KASRQVFNISGEKYVTFDGLAR  228 (246)
Q Consensus       153 ~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~l~~  228 (246)
                      .++++................+. ....+.+++..+.+++. +|+++++..++.++  ...|+.|++++ +.+|+.|+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~  228 (350)
T d1xgka_         150 IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCA  228 (350)
T ss_dssp             EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHH
T ss_pred             eeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHH
Confidence            98875311100000000011111 23344556677888886 79999999998654  23578898887 5799999999


Q ss_pred             HHHHHhCCCcceeecCC
Q 025908          229 ACAKVTGYCIAGCWISG  245 (246)
Q Consensus       229 ~~~~~~g~~~~~~~~p~  245 (246)
                      .+++.+|++++...+|.
T Consensus       229 ~l~~~~G~~v~~~~vp~  245 (350)
T d1xgka_         229 AFSRALNRRVTYVQVPK  245 (350)
T ss_dssp             HHHHHHTSCEEEEECSS
T ss_pred             HHHHHHCCcceEEECCH
Confidence            99999999998888774

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2e-24  Score=167.05  Aligned_cols=220  Identities=17%  Similarity=0.167  Sum_probs=142.5

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHH-Hhhh---cCCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSLS---AKGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-~~~~---~~~~d~   75 (246)
                      ||||||||++|++.|+++|+ +|+++.+-...... .            ...+...+|..+.+.+. ..+.   -..+++
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V------------NLVDLNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H------------HHHTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h------------cccccchhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999995 78888643332100 0            00011112222222222 2221   136899


Q ss_pred             EEecCCCCc--------------cchHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHH
Q 025908           76 VYDINGREA--------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (246)
Q Consensus        76 vi~~~~~~~--------------~~~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (246)
                      |+|+++...              ..+.++++++. ...++++.||..+++........++.+..|.+.| .+|...|.++
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            999987532              23556677766 3346777888787766555555566666677767 8999999877


Q ss_pred             H----hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcc-cCCCCCceeeeeeHHHHHHHHHHHhcCCCCC
Q 025908          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (246)
Q Consensus       140 ~----~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (246)
                      +    +.+++++++||+.+|||...     ......+...+..++... ..+++...++++|++|+++++..++.++.  
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--  229 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence            5    47899999999999999742     223445566666665433 34677788999999999999999998754  


Q ss_pred             CeeEEeeCCeeecHHHHHHHHHHHhC
Q 025908          210 RQVFNISGEKYVTFDGLARACAKVTG  235 (246)
Q Consensus       210 ~~~~~~~~~~~~s~~~l~~~~~~~~g  235 (246)
                      .+.|++++++..+++++++++.+..+
T Consensus       230 ~~~~~~~~~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         230 SGIFNLGTGRAESFQAVADATLAYHK  255 (307)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----
T ss_pred             ccccccccccchhHHHHHHHHHHhcC
Confidence            47999999999999999999987665

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=1e-24  Score=163.53  Aligned_cols=205  Identities=16%  Similarity=0.123  Sum_probs=143.0

Q ss_pred             CCccccchHHHHHHHHHCCCe--EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |||||++|+++++.|+++|++  |+.++|++++.. .+           ..+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-hc-----------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999965  666778765521 11           3678999999999999999998  9999999


Q ss_pred             cCCCC-----------------------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        79 ~~~~~-----------------------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +++..                             ..++.+++..+.  ..+++.+.|+...+.....      ....+..
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~~~~~~  148 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LNKLGNG  148 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GGGGGGC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------ccccccc
Confidence            98752                             123556666654  6778888887665322110      0011112


Q ss_pred             cc-ccHHHHHHHHHhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 025908          128 RH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (246)
Q Consensus       128 ~~-~~k~~~e~~~~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (246)
                      .+ ..+...+.+..+.+++++++||+++||+.......      . .+.....   .....++|+++|+|++++.+++++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~------~-~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVREL------L-VGKDDEL---LQTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             CHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCE------E-EESTTGG---GGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             chhhhhhhhhhhhhcccccceeecceEEECCCcchhhh------h-hccCccc---ccCCCCeEEHHHHHHHHHHHhCCc
Confidence            22 55666677778899999999999999986321100      0 1111111   123467999999999999999988


Q ss_pred             CCCCeeEEeeCCe---eecHHHHHHHHHHHhC
Q 025908          207 KASRQVFNISGEK---YVTFDGLARACAKVTG  235 (246)
Q Consensus       207 ~~~~~~~~~~~~~---~~s~~~l~~~~~~~~g  235 (246)
                      ...+++|+++++.   ..++.++.+++.+..+
T Consensus       219 ~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         219 EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            8788999998743   3567777777765443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=1.7e-22  Score=148.08  Aligned_cols=167  Identities=19%  Similarity=0.157  Sum_probs=115.4

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      ||||||+|++|+++|+++|+  +|++++|++...               ...+   ..+..|..++...+. ..+|+|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------------~~~~---~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRL---DNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------------cccc---cccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  677777654331               1222   334444444444443 36899999


Q ss_pred             cCCCC--------------ccchHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHHh
Q 025908           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (246)
Q Consensus        79 ~~~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (246)
                      ++|..              ...+.+++++|+  ++++|+++|+.++++.             +.++| .+|..+|+.+++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence            98763              224667888877  8899999999887532             22345 899999999998


Q ss_pred             cCC-ceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCC
Q 025908          142 KGV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (246)
Q Consensus       142 ~~~-~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (246)
                      .++ +++|+||+.+||+.+.......      ....+....+  ..+.+|+++|+|++++.+++++.
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~------~~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEI------LAAPIARILP--GKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGG------TTCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cccccceeeCCcceeCCcccccHHHH------HHHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCC
Confidence            887 5999999999998653221111      0111111111  33567999999999999998765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.67  E-value=7.6e-16  Score=113.65  Aligned_cols=181  Identities=19%  Similarity=0.269  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++..|+...                ..++..+.+|++|++++++++++     .++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998766                35677899999999888877754     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +    .+.++..+.  +..++|++||.......           .....|
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  145 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANY  145 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----------cccHHH
Confidence            9999987422                    1    222333333  55689999987764211           112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+.+       ..|+++..+.|+.+..+... .+.........+..++         .-+..++|+|++++.
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  215 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFIPA---------KRVGTPAEVAGVVSF  215 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGGCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh-ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       46899999999988665210 0011122222222222         124568999999999


Q ss_pred             HhcC--CCCCCeeEEeeCC
Q 025908          202 VLGN--EKASRQVFNISGE  218 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~  218 (246)
                      ++..  ....|+++.+.||
T Consensus       216 L~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         216 LASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhcCCcCCeEEECCC
Confidence            9854  3457889999887

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=1.1e-15  Score=113.27  Aligned_cols=188  Identities=18%  Similarity=0.177  Sum_probs=128.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++.+|+..+..+...          ..++..+.+|++|++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998765322211          24678899999999998888754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||.....                        .+.++..+.  +...++.+||....+.            .....|
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~------------~~~~~Y  148 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------LGQANY  148 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------------TTCHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC------------CCCcch
Confidence            99999874321                        233344433  4456666666443211            112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+.+       ..|+++..+.||.+-.+.... .............++..         +..++|+|++++.
T Consensus       149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R---------~~~pedia~~v~f  218 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGR---------AGKPLEVAYAALF  218 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHH
Confidence             88998887653       468999999999987764222 22333344444433321         3458999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCee
Q 025908          202 VLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~~  220 (246)
                      ++.+  ....|+++.+.+|..
T Consensus       219 L~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         219 LLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhchhhCCCCCcEEEECCCcc
Confidence            9854  345789999988753

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.65  E-value=1.4e-15  Score=113.29  Aligned_cols=189  Identities=15%  Similarity=0.115  Sum_probs=127.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++.+|+.++..+...        +....+..+.+|+++++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998766322211        2246788999999999988887754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+|+.....                        .+.++..+.  +..++|++||...+..           ......|
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-----------~~~~~~Y  151 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-----------ccchhhH
Confidence            99999874321                        223333333  5679999999776321           1112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceee-e-eeHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ-L-GHVKDLARAF  199 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-i~~~D~a~~~  199 (246)
                       .+|..++.+.+       ..|+++..+.|+.+..+         +..............  ..+.. + ..++|+|+++
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~---------~~~~~~~~~~~~~~~--~~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP---------MTAETGIRQGEGNYP--NTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH---------HHHHHTCCCSTTSCT--TSTTSSCB-CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc---------cchhcCHHHHHHHHh--CCCCCCCCCCHHHHHHHH
Confidence             88988887653       46899999999987654         111211111101000  11111 1 3479999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCe
Q 025908          200 VQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +.++..  ....|+++.+.+|.
T Consensus       221 ~fL~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhchhhCCCCCceEEeCCCc
Confidence            999854  34578999999885

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.65  E-value=9.4e-16  Score=113.51  Aligned_cols=186  Identities=15%  Similarity=0.148  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|+++|++|++.+|++++..+.        ..++...+..+.+|++|++++++++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999999999999987653211        112246788899999999888877754     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +    ++.++..+.  +..++|++||...+...           .....|
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----------~~~~~Y  152 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  152 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-----------ccccch
Confidence            9999987432                    1    222233333  45689999997763211           112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+.+       ..|+++..+.|+.+..+....         . ......     .....+..++|+|+++++
T Consensus       153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~---------~-~~~~~~-----~pl~R~~~p~diA~~v~f  217 (244)
T d1nffa_         153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---------V-PEDIFQ-----TALGRAAEPVEVSNLVVY  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---------S-CTTCSC-----CSSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh---------h-hHHHHh-----ccccCCCCHHHHHHHHHH
Confidence             88999887653       478999999999887652100         0 000000     011236679999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCee
Q 025908          202 VLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~~  220 (246)
                      ++..  ....|+++.+.+|..
T Consensus       218 L~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         218 LASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhChhhCCCcCCEEEECCCee
Confidence            9854  345788999988753

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.64  E-value=4.2e-15  Score=110.37  Aligned_cols=193  Identities=16%  Similarity=0.185  Sum_probs=123.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|.+.+|++.+...       ........++..+.+|++|++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-------HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211       11223346789999999999988877753     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||.....                        ++.++..+.  +..++|++||.....+           ......|
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~Y  152 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------IEAYTHY  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------CSSCHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-----------Ccccccc
Confidence            99999874321                        223333343  5578999998776311           1112234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|...+.+.+       ..|+++..+.||.+..+............... ....+       ..-+..++|+|++++.
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~~-------l~r~~~pedvA~~v~f  224 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NMLQA-------IPRLQVPLDLTGAAAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSS-------SCSCCCTHHHHHHHHH
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HHhcc-------CCCCCCHHHHHHHHHH
Confidence             88988887653       46899999999988766321111111111110 00001       1124568999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCe
Q 025908          202 VLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++..  ....|+++.+.+|-
T Consensus       225 L~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         225 LASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HTSGGGTTCCSCEEEESSSC
T ss_pred             HhCchhcCCcCCeEEECCCE
Confidence            9854  34578899998874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.6e-15  Score=113.18  Aligned_cols=194  Identities=13%  Similarity=0.134  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|++..|+.++..+..     .+..+...++..+.+|+++++++++++++     .++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865532111     11222245788999999999888877754     37999


Q ss_pred             EEecCCCCcc-------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~-------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||++|....                   +    ++.++..+.  +..++|++||...+..           ......| 
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~  160 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-----------ccccccch
Confidence            9999987432                   1    122223232  4558899998766321           1112235 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       .+|+++..+.||.+..+...............+..++.         -+..++|+|++++.+
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL  231 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            88998887653       46899999999988765311111222333333333331         234589999999999


Q ss_pred             hcC--CCCCCeeEEeeCCe
Q 025908          203 LGN--EKASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~--~~~~~~~~~~~~~~  219 (246)
                      +..  ....|+++.+.||.
T Consensus       232 ~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhcCCcCCEEEECcCc
Confidence            854  34578999999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.63  E-value=3.9e-15  Score=110.81  Aligned_cols=196  Identities=17%  Similarity=0.193  Sum_probs=130.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|+++|++|.+.+|+.++..+...+    -.......+..+.+|+++++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK----LTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987653221110    0112235688899999999888887754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||.....                        ++.++..+.  +..++|++||.....          .+......|
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~~~~~~~~Y  156 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------VTMPNISAY  156 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------CCSSSCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------ccCccccch
Confidence            99999874221                        333444444  456899998865411          011112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                       .+|..++.+.+       ..|+++..+.||.+-.+...... .........+..++.         .+..++|+|++++
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~  227 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------RTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------SCBCGGGGHHHHH
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence             88988887653       47899999999998776421100 012223333333321         1345899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCe
Q 025908          201 QVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .++..  ....|+++.+.+|.
T Consensus       228 fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCcEEEeCcCe
Confidence            99854  34578899998874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-15  Score=112.83  Aligned_cols=190  Identities=13%  Similarity=0.137  Sum_probs=129.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||++.||+++++.|.++|++|++.+|+.++..+..         +...++..+.+|++|.+++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~---------~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV---------RECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH---------HhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            799999999999999999999999999866532111         11357888999999999999999764 69999999


Q ss_pred             CCCCccc------------------------hHHHHHh-CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           80 NGREADE------------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      ++.....                        ++.++.. ++  +..++|++||......           ......| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~as  152 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----------ccchhhhhhh
Confidence            9874321                        2223332 22  4468999998776311           1112234 88


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      |...+.+.+       ..|+++..+.||.+..+..... ..........+..++         ..+..++|+|+++..++
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL~  223 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            988887653       4689999999998876521000 011122222222222         12556899999999998


Q ss_pred             cC--CCCCCeeEEeeCCe
Q 025908          204 GN--EKASRQVFNISGEK  219 (246)
Q Consensus       204 ~~--~~~~~~~~~~~~~~  219 (246)
                      .+  ....|+.+.+.+|.
T Consensus       224 S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         224 SDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             SGGGTTCCSCEEEESTTG
T ss_pred             CchhCCcCCcEEEECccH
Confidence            54  34578899998874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.63  E-value=1.7e-15  Score=112.75  Aligned_cols=193  Identities=17%  Similarity=0.236  Sum_probs=130.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|++..|+..+..+..     .+......++..+.+|++|++++++++++     .++|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            799999999999999999999999999765532111     11112235788999999999988887764     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+++....                    +    .+.++..+.  +..++|++||...+....           ....|
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~~~~Y  159 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------GQANY  159 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC-----------CCHHH
Confidence            9999986422                    1    222333333  557999999977642211           12234


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+.+       ..|+++..|.||.+..+.... .............++.         -+..++|+|++++.
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~f  229 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAG---------RMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence             88998887653       468999999999987764221 1223333333333321         24558999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCe
Q 025908          202 VLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++..  ....|+++.+.||-
T Consensus       230 L~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCchhCCCcCcEEEECCCc
Confidence            9854  34578899998873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=2e-15  Score=111.82  Aligned_cols=190  Identities=15%  Similarity=0.165  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++..|+.++..+.        ..++..+...+.+|+++++++++++++     .++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAI--------SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            79999999999999999999999999986653211        112245678899999999888777754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+|+.....                        .+.++..+.  +..++|++||...+....           ....|
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~~Y  150 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----------GQANY  150 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------CCHHH
Confidence            99999874321                        233333333  556899999977642211           11235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (246)
                       .+|..++.+.+       .+|+++..+.||.+-.+.... .............++         .-+..++|+|+++++
T Consensus       151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  220 (243)
T d1q7ba_         151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVPA---------GRLGGAQEIANAVAF  220 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             89999887653       478999999999886542111 111122222222222         124568999999999


Q ss_pred             HhcC--CCCCCeeEEeeCCe
Q 025908          202 VLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       202 ~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++..  ....|+++.+.+|.
T Consensus       221 L~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         221 LASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCchhcCCcCCeEEECCCe
Confidence            9954  33578899998874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=3.8e-15  Score=111.39  Aligned_cols=196  Identities=15%  Similarity=0.148  Sum_probs=118.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc------CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~------~~~d   74 (246)
                      |||++-||+++++.|+++|++|+++.|+..+..+..     .+......++..+.+|+++++++++++++      ..+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            799999999999999999999999999876532211     11112235789999999998887776643      2489


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.++..++  +..++|++||......           ......
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~  157 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----------ASVGSI  157 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc-----------cccccc
Confidence            99999987421                    1    222333333  5568999998765321           111234


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|..++.+.+       ..|+++..+.||.+-.|..................++         .-+..++|+|++++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~  228 (259)
T d1xq1a_         158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL---------GRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC---------CCCcCHHHHHHHHH
Confidence            5 88998887653       4789999999998876632111111111111111111         12456899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCeee
Q 025908          201 QVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      .++..  ....|+.+.+.+|..+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            99853  3457889999988644

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.61  E-value=2.4e-15  Score=111.50  Aligned_cols=195  Identities=17%  Similarity=0.195  Sum_probs=128.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|.+.+++.....+.+.    ........++..+.+|++|++++++++++     .++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            7999999999999999999999987665443222111    12223346788999999999888877754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+|+.....                        ++.++..+.  +..++|++||...+-...          ....|.
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~----------~~~~Y~  152 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI----------GQANYA  152 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------TCHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC----------CCHHHH
Confidence            99999874321                        233444443  557999999977642211          111233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (246)
                      .+|...+.+.+       ..|+++..+.||.+-.+... ..............++.         -+..++|+|+++..+
T Consensus       153 asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~p~dvA~~v~fL  222 (244)
T d1edoa_         153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-KLGEDMEKKILGTIPLG---------RTGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-TTCHHHHHHHHTSCTTC---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH-HhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            88999887653       46899999999988654210 01122223333332221         245589999999998


Q ss_pred             hcCC---CCCCeeEEeeCCe
Q 025908          203 LGNE---KASRQVFNISGEK  219 (246)
Q Consensus       203 ~~~~---~~~~~~~~~~~~~  219 (246)
                      +..+   ...|+++.+.||-
T Consensus       223 a~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             HCCchhcCCcCCeEEeCCCe
Confidence            6332   3578899888873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.61  E-value=5.7e-15  Score=110.45  Aligned_cols=196  Identities=16%  Similarity=0.140  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++..|+.....+.+.    .........+..+.+|++|++++++++++     .++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998643221111    11122245788899999999888887754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--C-CceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|.....                        ++.++..+.  + ...++++||......           ......
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~-----------~~~~~~  157 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------WPLFVH  157 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc-----------Cccccc
Confidence            99999874321                        223333332  3 345888998765311           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-HHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      | .+|..++.+.+       ..|+++..+.|+.+..+...... ............++.         -+..++|+|+++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v  228 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAVA  228 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHH
T ss_pred             cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHH
Confidence            5 88998887653       46899999999998766311100 011222222222221         244589999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCee
Q 025908          200 VQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      +.++..  ....|+.+.+.+|..
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         229 AWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCcCCeEEECCCee
Confidence            999854  345789999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=2.6e-15  Score=111.48  Aligned_cols=190  Identities=13%  Similarity=0.091  Sum_probs=125.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|.+..|+.+.. +..        .  ..+...+++|++|.+++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVA--------E--AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHH--------H--HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHH--------H--HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            79999999999999999999999999986542 111        1  23567789999999888877754     37999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ......|
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~Y  148 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------EQENAAY  148 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------CTTBHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-----------ccccchh
Confidence            9999987422                    1    222333333  4568999998776421           1112235


Q ss_pred             -ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                       .+|..++.+.+       ..|++++.+.||.+-.|...     ...............++         ..+..++|+|
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia  219 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRLGKPEEVA  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence             88998887653       46899999999987654100     00000011111111111         1245689999


Q ss_pred             HHHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          197 RAFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      +++..++..  ....|+.+.+.+|-..
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         220 EAVLFLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhcCCCCcEEEcCcCccc
Confidence            999999854  3457889999988643

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1.5e-15  Score=112.50  Aligned_cols=190  Identities=14%  Similarity=0.150  Sum_probs=127.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcC-CccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~-~~d~vi~~   79 (246)
                      |||++.||+++++.|.++|++|++..|+.++..+..         +...++..+.+|++|++++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~---------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA---------KECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---------HhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            799999999999999999999999999866532111         11357888999999999999999864 58999999


Q ss_pred             CCCCccc------------------------hHHHHHh-CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-cc
Q 025908           80 NGREADE------------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (246)
                      ||.....                        .+.++.. +.  ...++|++||...+..           ......| .+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~~~~~~Y~as  150 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------FPNLITYSST  150 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----------CCccccccch
Confidence            9874221                        1222222 11  3458999998765321           1112234 88


Q ss_pred             HHHHHHHHH-------hcCCceEEeecceeeCCCCCC-chHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       132 k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      |..++.+.+       ..|+++..+.|+.+..+.... .........+....++         ..+..++|+|++++.++
T Consensus       151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeva~~v~fL~  221 (242)
T d1cyda_         151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDVVNSILFLL  221 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            999887654       468999999999886642000 0001122222222222         12455899999999998


Q ss_pred             cC--CCCCCeeEEeeCCe
Q 025908          204 GN--EKASRQVFNISGEK  219 (246)
Q Consensus       204 ~~--~~~~~~~~~~~~~~  219 (246)
                      ..  ....|+++.+.+|.
T Consensus       222 S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         222 SDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             SGGGTTCCSSEEEESTTG
T ss_pred             CchhcCcCCceEEeCcch
Confidence            54  34578899998874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4e-15  Score=110.52  Aligned_cols=192  Identities=18%  Similarity=0.172  Sum_probs=127.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|+++|++|++.+|+.+...+.         .+...++..+.+|++|++++++++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~---------~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986553211         11135788999999999988887754     27999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                     +    ++.++..++ +..++|++||.......          .....|.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~----------~~~~~Y~  152 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----------AQAVPYV  152 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC----------TTCHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc----------cCcchhH
Confidence            9999985321                     1    222333333 33689999987764211          1111233


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCCC-----CCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      .+|..++.+.+       ..|++++.+.||.+..|..     ...-....+.......++.         -+..++|+|+
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~p~eva~  223 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG---------RMGQPAEVGA  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------SCBCHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------CCCCHHHHHH
Confidence            88988887653       4789999999998865410     0000111222222222221         2456899999


Q ss_pred             HHHHHhcC-CCCCCeeEEeeCCee
Q 025908          198 AFVQVLGN-EKASRQVFNISGEKY  220 (246)
Q Consensus       198 ~~~~~~~~-~~~~~~~~~~~~~~~  220 (246)
                      +++.++.+ ....|+++.+.+|..
T Consensus       224 ~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         224 AAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             HHHHHhCccCCCcCCeEEECCCcc
Confidence            99998843 345788999988754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.60  E-value=3.2e-15  Score=111.31  Aligned_cols=193  Identities=19%  Similarity=0.179  Sum_probs=124.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|.+..|+.+...+...     . .....++..+.+|++|++++++++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----S-VGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----H-HCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----H-hCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            7999999999999999999999999998655321110     0 01135789999999999888877754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC--CC-ceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREADE------------------------VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++.....                        .+.++..+.  +. .++|++||...+-.           ......
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-----------~~~~~~  154 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----------DPSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----------CCCchh
Confidence            99999874321                        222333333  32 47899998765311           111123


Q ss_pred             c-ccHHHHHHHH---------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~---------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|..++.+.         ..+|+++..+.||.+..+.............  .....++       .-+..++|+|++
T Consensus       155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~pl-------~R~~~pedvA~~  225 (251)
T d1zk4a1         155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS--QRTKTPM-------GHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHT--STTTCTT-------SSCBCHHHHHHH
T ss_pred             HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHH--HHhCCCC-------CCCcCHHHHHHH
Confidence            4 7887776543         2468999999999886652100000111110  0011111       125568999999


Q ss_pred             HHHHhcC--CCCCCeeEEeeCCe
Q 025908          199 FVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +++++..  ....|+.+.+.+|.
T Consensus       226 v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         226 CVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCCcCcEEEECccc
Confidence            9999854  34578899998874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.58  E-value=1.2e-14  Score=108.50  Aligned_cols=189  Identities=16%  Similarity=0.181  Sum_probs=129.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|+++|++|++.+|+.++..+.        ..++..++..+.+|+++++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~--------~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARAT--------AAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            79999999999999999999999999986553211        122346788999999999988888764     37999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHh-CC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                    +    ++.++.. ++  +..++|++||...+..           ......
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-----------EALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----------cccccc
Confidence            9999997432                    1    1222222 22  3468999998776311           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHH---------------HHHhCCCcccCCCCCc
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------------RLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  185 (246)
                      | .+|...+.+.+       ..||+++.+.||.+-.+.     ...+..               .+....++        
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------  218 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH-----WDGVDAKFADYENLPRGEKKRQVGAAVPF--------  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT-----HHHHHHHHHHHHTCCTTHHHHHHHHHSTT--------
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh-----hhhhhhhhhhhccCChHHHHHHHHhcCCC--------
Confidence            5 88998887653       468999999999887763     111111               11111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCeeec
Q 025908          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVT  222 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~~s  222 (246)
                       .-+..++|+|++++.++..  ....|+.+.+.||..+|
T Consensus       219 -gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 -GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             -SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence             1245689999999998854  34578999999986543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.58  E-value=2.1e-14  Score=107.32  Aligned_cols=194  Identities=15%  Similarity=0.136  Sum_probs=128.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----C-Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~-~~d   74 (246)
                      |||++-||+++++.|.++|++|++.+|+.++..+..     .+......++..+.+|++|++++++++++     . .+|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            799999999999999999999999999866532211     11222245788899999999888777643     2 489


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||++|....                    +    ++.++..+.  +..++|++||......           ......
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~  157 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  157 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc-----------cccccc
Confidence            99999987422                    1    222333333  4568999998766311           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC----CCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      | .+|..++.+.+       ..++++..+.|+.+-.+..    ........+.......++.         -+..++|+|
T Consensus       158 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA  228 (259)
T d2ae2a_         158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            5 88998887654       4689999999998866420    0111112223333333321         244589999


Q ss_pred             HHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          197 RAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++++.++..  ....|+.+.+.+|-
T Consensus       229 ~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         229 AMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECCCe
Confidence            999999854  34578899998874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.57  E-value=7.1e-15  Score=108.75  Aligned_cols=190  Identities=18%  Similarity=0.252  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++..|+..+..+..        .++...+..+++|+++++++++++++     .++|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876642221        12246788899999999988887754     26999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +||+++.....                        .+.++..+.+...++.+|+.+..            +......| .
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~~~~~Y~~  150 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAFGLAHYAA  150 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cccCccccch
Confidence            99998764221                        12222333344455555543321            11111234 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (246)
                      +|...|.+.+       ..|+++..+.||.+-.+... ..............++.         .+..++|+|++++.++
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-GLPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLL  220 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-TSCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-hhhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHh
Confidence            8999888764       36799999999988665321 12233344444433331         2445899999999999


Q ss_pred             cC--CCCCCeeEEeeCCee
Q 025908          204 GN--EKASRQVFNISGEKY  220 (246)
Q Consensus       204 ~~--~~~~~~~~~~~~~~~  220 (246)
                      ..  ....|+++.+.+|..
T Consensus       221 S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             cchhCCCcCceEEeCCCcc
Confidence            64  345788999988853

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.57  E-value=6.4e-14  Score=104.79  Aligned_cols=195  Identities=19%  Similarity=0.184  Sum_probs=125.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||.++++.|+++|++|++..|+..+..+...    ........++..+.+|++|++++.+++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH----HHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999988776555221111    11222345788999999998888777753     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCCCCceEEEEeecce-eccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||++|.....                        .+.++..+++..+.+.++|... ..           +......| 
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~-----------~~~~~~~Y~  156 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-----------GIPNHALYA  156 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------SCCSCHHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc-----------CCCCchhHH
Confidence            99999974321                        2333344443345666665433 11           11111234 


Q ss_pred             ccHHHHHHHHH-------hcCCceEEeecceeeCCC------------CCCchHHHHHHHHHhCCCcccCCCCCceeeee
Q 025908          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (246)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (246)
                      .+|..++.+.+       ..|+++..|.||.+-.+.            ........+...+....++.         -+.
T Consensus       157 asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g  227 (259)
T d1ja9a_         157 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIG  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCB
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCc
Confidence            88988887654       468999999999886431            00111122333333333331         245


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          191 HVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .++|+|++++.++.+.  ...|+++.+.+|.
T Consensus       228 ~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         228 YPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            6899999999999653  3578899988874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.57  E-value=2.8e-14  Score=106.72  Aligned_cols=193  Identities=12%  Similarity=0.192  Sum_probs=127.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++.+|+..+..+..     ........++..+.+|+++++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            799999999999999999999999999865532111     11112235788999999999888887754     27999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||++|....                     +    ++.++..+.  +..++|++||...+...           .....
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----------~~~~~  154 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  154 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----------cchHH
Confidence            9999986321                     1    222333332  55689999997764211           11123


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC---------------CCchHHHHHHHHHhCCCcccCCCCCc
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                      | .+|...+.+.+       ..|++++.+.||.+-.+..               .......+...+....++.       
T Consensus       155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-------  227 (260)
T d1zema1         155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-------  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-------
Confidence            4 88988887653       4689999999998876520               0001111222222222221       


Q ss_pred             eeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCC
Q 025908          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNISGE  218 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~  218 (246)
                        -+..++|+|++++.++..  ....|+.+.+.+|
T Consensus       228 --R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 --RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             --SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence              244589999999999964  3457888888765

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.57  E-value=2.9e-14  Score=106.45  Aligned_cols=194  Identities=14%  Similarity=0.118  Sum_probs=126.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----C--Ccc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~--~~d   74 (246)
                      |||++-||+++++.|+++|++|++.+|++.+..+..     .........+..+.+|+++.+++++++++    .  .+|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            799999999999999999999999999875532211     11222245678889999999888776632    2  489


Q ss_pred             EEEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +++|+++.....                        .+.++..+.  +..++|++||.....+           ......
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~-----------~~~~~~  155 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----------LPSVSL  155 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc-----------cccchh
Confidence            999999874321                        112222222  6679999998776321           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-----hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      | .+|..++.+.+       ..++++..+.||.+..+.....     .............++         .-+...+|+
T Consensus       156 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~pedi  226 (258)
T d1ae1a_         156 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            4 88988887654       4689999999999987642111     111223333332222         125669999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      |+++..++.+  ....|+.+.+.+|-
T Consensus       227 A~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         227 SALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhChhhCCCcCcEEEeCCCe
Confidence            9999999953  44578889898874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.57  E-value=9.4e-15  Score=109.43  Aligned_cols=203  Identities=15%  Similarity=0.169  Sum_probs=125.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++-||+++++.|+++|++|++..|+.....+.+.    ... .....++..+.+|++|++++++++++     .++|
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999997543211111    011 11235788899999999988888764     2799


Q ss_pred             EEEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||.....                        ++.++..+.  +..++|++||...+..           ......
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~  154 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKSA  154 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec-----------cCCcch
Confidence            999999974321                        223333333  4569999999776321           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH--hCCCc-ccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPI-PIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|..++.+.+       ..|++++.+.||.+-.+..... .........  ..... ..........-+..++|+|+
T Consensus       155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~  233 (260)
T d1x1ta1         155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred             hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh-hhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            5 88998887653       4689999999998876531110 000000000  00000 00000000113566999999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCe
Q 025908          198 AFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++++++..  ....|+.+.+.+|-
T Consensus       234 ~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         234 TAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhChhhCCCcCCEEEECcch
Confidence            99999954  34578899998874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=4.3e-15  Score=110.91  Aligned_cols=203  Identities=16%  Similarity=0.182  Sum_probs=129.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCcccc---CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~   72 (246)
                      |||++-||+++++.|.++|++|.+++|+.++..+   .+.+.      ....++..+.+|+++++++++++++     .+
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ------FEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT------SCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh------cCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998765321   11110      0135788899999999888877753     27


Q ss_pred             ccEEEecCCCCccc----------------hHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           73 FDVVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        73 ~d~vi~~~~~~~~~----------------~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      +|++||+|+.....                .+..+..+.     ...++|++||...+-           +......| .
T Consensus        83 iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~a  151 (254)
T d2gdza1          83 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQQPVYCA  151 (254)
T ss_dssp             CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTCHHHHH
T ss_pred             cCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------CCCCccchHH
Confidence            99999999975331                222333333     124699999877631           11112234 7


Q ss_pred             cHHHHHHHH---------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCccc---CCCCCceeeeeeHHHHHHH
Q 025908          131 GKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       131 ~k~~~e~~~---------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~  198 (246)
                      +|..++.+.         ...|+++..+.||.+-.+.     ...+............   ..+......+..++|+|++
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  226 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI-----LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH-----HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh-----hhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            888776543         2468999999999875541     1000000000000000   0000001124558999999


Q ss_pred             HHHHhcCCCCCCeeEEeeCCeeecHHH
Q 025908          199 FVQVLGNEKASRQVFNISGEKYVTFDG  225 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~s~~~  225 (246)
                      ++.++.++...|+++.+.+|..+.++|
T Consensus       227 v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         227 LITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            999998777789999999998766543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.57  E-value=2.7e-14  Score=106.68  Aligned_cols=193  Identities=21%  Similarity=0.277  Sum_probs=127.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|++..|+.++..+..     .+......++..+.+|++|++++++++++     .++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865532111     11222245788999999999988877754     26999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||+||....                    +    ++.++..+.    +..++|++||...+...           ....
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-----------~~~~  151 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----------VHAA  151 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-----------TTCH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-----------ccch
Confidence            9999987422                    1    222333222    44689999887663211           1112


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC----------CCchHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      .| .+|..++.+.+       ..|+++..+.||.+-.|..          ...........+.+..++         .-+
T Consensus       152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl---------gR~  222 (257)
T d2rhca1         152 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI---------GRY  222 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT---------SSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC---------CCC
Confidence            34 88998887654       3679999999998865410          000011122222222222         124


Q ss_pred             eeHHHHHHHHHHHhcC--CCCCCeeEEeeCC
Q 025908          190 GHVKDLARAFVQVLGN--EKASRQVFNISGE  218 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~  218 (246)
                      ..++|+|++++.++..  ....|+.+.+.+|
T Consensus       223 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         223 VQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            5689999999999853  3457889999887

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.57  E-value=1.9e-14  Score=107.45  Aligned_cols=197  Identities=16%  Similarity=0.193  Sum_probs=127.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|.+..|+..+..+....   .........+..+.+|++|++++++++++     .++|+
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~---~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   86 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA---VLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---HHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999987653211000   00001124688899999999988887754     27999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                     +    ++.++..++  +..++|++||...+-.           ......
T Consensus        87 LVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~  155 (258)
T d1iy8a_          87 FFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------IGNQSG  155 (258)
T ss_dssp             EEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------CSSBHH
T ss_pred             EEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-----------CCCchH
Confidence            9999986321                     1    222333333  5568999999776311           111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCC-------CchHHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      | .+|..++.+.+       ..||++..+.||.+..|...       ...............++         .-+..++
T Consensus       156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~p~  226 (258)
T d1iy8a_         156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYGEAP  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCcCHH
Confidence            5 88988877653       46899999999988665200       00011112222222222         1245689


Q ss_pred             HHHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          194 DLARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       194 D~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      |+|++++.++..  ....|+.+.+.+|..
T Consensus       227 dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         227 EIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            999999999854  345788999998854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.6e-15  Score=113.58  Aligned_cols=197  Identities=11%  Similarity=0.171  Sum_probs=124.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh-hhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++.||+++++.|.++|++|++..|+.++..+...+ ..... .....++..+.+|++|++++.+++++     .++|
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~e-l~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   96 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE-LQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN   96 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence            79999999999999999999999999987653211000 00000 00135788899999999988887754     2799


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+++....                    +    ++.++..+.  +..++|.+|+....            .......
T Consensus        97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~------------~~~~~~~  164 (297)
T d1yxma1          97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------GFPLAVH  164 (297)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------CCTTCHH
T ss_pred             EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc------------ccccccc
Confidence            99999986432                    1    223333333  44567777653321            0111223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc---hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      | .+|..++.+.+       ..|+++..|.||.+..+.....   ....+........++         .-+..++|+|+
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~  235 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSS  235 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            4 78998887654       4689999999999877631110   001111111111111         12456899999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCe
Q 025908          198 AFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      +++.++..  ....|+++.+.+|.
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCcCCcEEEeCcCh
Confidence            99999954  34578899998875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.56  E-value=6.3e-14  Score=105.33  Aligned_cols=198  Identities=15%  Similarity=0.162  Sum_probs=129.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++.+|+.++..+...     +. .....+.++.+|++|++++++++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~l-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----NI-GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----Hh-cCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            7999999999999999999999999998655321110     00 0135688899999999988888753     27999


Q ss_pred             EEecCCCCcc--------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~--------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                          .++.++..+.  +..++|++||...+...          .....
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~----------~~~~~  155 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------EGVSH  155 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------TTSCH
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc----------ccccc
Confidence            9999985311                          0233334333  45689999887653111          11122


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (246)
                      +| .+|..++.+.+       ..|+++..+.||.+..|.....  ............... ..+      .+..++|+|+
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~~g------r~~~pedvA~  228 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-LKG------TLLRAEDVAD  228 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-SCS------CCCCHHHHHH
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-cCC------CCcCHHHHHH
Confidence            45 78998887653       4689999999999887642211  111111111111111 111      2456899999


Q ss_pred             HHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          198 AFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      +++.++..  ....|+++.+.+|...
T Consensus       229 ~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         229 AVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhChhhCCccCceEEECcCccc
Confidence            99999954  3457899999998643

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.56  E-value=2.2e-14  Score=107.00  Aligned_cols=199  Identities=19%  Similarity=0.233  Sum_probs=126.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|.+.+|+.++..+..     .+......++..+.+|++|++++++++++     .++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876532111     11122245788899999999888877754     27999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+||....                    +    ++.++..+.   +..+++++||...+.           +......
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cCccccc
Confidence            9999987432                    1    222333222   345789999876531           1111233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHH--hCCCccc----CCCCCceeeeeeHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPI----PGSGIQVTQLGHVKD  194 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~i~~~D  194 (246)
                      | .+|...+.+.+       ..|+++..+.||.+-.|.     ...+.....  .......    ........-+..++|
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pee  225 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHH
Confidence            5 88998887653       468999999999875541     111111110  0000000    000000112556899


Q ss_pred             HHHHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          195 LARAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       195 ~a~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      +|++++.++..  ....|+.+.+.+|-.
T Consensus       226 vA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         226 VAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            99999999854  345788999988753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5.7e-14  Score=104.05  Aligned_cols=191  Identities=13%  Similarity=0.096  Sum_probs=128.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-CCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~d~vi~~   79 (246)
                      |||++.||+++++.|+++|++|++.+|++++..+...          ..++....+|+.+.+.++...+. .++|++||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998766332221          36788899999887777766654 379999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      +|.....                        ++.++..+.  +..++|++||...-          ..+......| .+|
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence            9874321                        222233222  45689999875430          0112222334 899


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCC-----CchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      ...+.+.+       ..|+++..+.||.+-.|...     ..........+....++         .-+..++|+|+++.
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~  222 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            99988764       46899999999988775210     00011122222222222         12556899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCee
Q 025908          201 QVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      .++.+  ....|+.+.+.+|..
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhChhhCCCcCceEEeCCCcC
Confidence            99964  345788999998753

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.55  E-value=4.7e-14  Score=103.88  Aligned_cols=183  Identities=15%  Similarity=0.199  Sum_probs=120.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      |||++-||+++++.|.++|++|.+.+|+.+...              ..+.+++.+|+++ .+.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999865421              2456678899975 344444443  79999999


Q ss_pred             CCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        80 ~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ||.....                        ++.++..++  +..++|++||......           ......| .+|
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~-----------~~~~~~Y~asK  142 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------IENLYTSNSAR  142 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc-----------ccccccchhHH
Confidence            9864221                        223333333  4568999998765311           1112234 789


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (246)
                      ..++.+.+       ..|+++..+.||.+..+..................++         ..+..++|+|++++.++..
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM---------RRMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh
Confidence            88886653       4689999999998877631111111122222222222         1245689999999999854


Q ss_pred             --CCCCCeeEEeeCCe
Q 025908          206 --EKASRQVFNISGEK  219 (246)
Q Consensus       206 --~~~~~~~~~~~~~~  219 (246)
                        ....|+++.+.+|-
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence              34578999998874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.53  E-value=7e-14  Score=104.86  Aligned_cols=198  Identities=14%  Similarity=0.107  Sum_probs=122.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++..|+.++..+...+. . .......++..+.+|+++.+++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l-~-~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   88 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQI-L-AAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDI   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-H-HTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-H-hcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876532111000 0 0000124689999999999888887754     27999


Q ss_pred             EEecCCCCcc------------------------c----hHHHHHhCC-CCceEEEEeecce-eccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~------------------------~----~~~l~~a~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~  125 (246)
                      +||++|....                        +    ++.++..++ +..++|.++|... +.           +...
T Consensus        89 lvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~-----------~~~~  157 (264)
T d1spxa_          89 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH-----------ATPD  157 (264)
T ss_dssp             EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS-----------CCTT
T ss_pred             eecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc-----------cCCC
Confidence            9999986311                        0    222333333 3345666665432 11           1111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--------hHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ...| .+|...+.+.+       ..|++++.+.||.+-.+.....        ..........+..++.         -+
T Consensus       158 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~---------R~  228 (264)
T d1spxa_         158 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG---------VM  228 (264)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS---------SC
T ss_pred             chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC---------CC
Confidence            2335 88998887653       4689999999999876531110        0011111222222221         24


Q ss_pred             eeHHHHHHHHHHHhcC---CCCCCeeEEeeCCee
Q 025908          190 GHVKDLARAFVQVLGN---EKASRQVFNISGEKY  220 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~---~~~~~~~~~~~~~~~  220 (246)
                      ..++|+|++++.++.+   ....|+.+.+.||..
T Consensus       229 g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         229 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            4589999999999853   235789999988753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.53  E-value=9.8e-14  Score=103.22  Aligned_cols=189  Identities=15%  Similarity=0.168  Sum_probs=125.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++.+|+.++..+.        ..++......+.+|+++.+++++++++     .++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            79999999999999999999999999976553211        112246688899999998888777754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      +||++|.....                        .+.++..++ +..++|++||...+.           +......| 
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-----------~~~~~~~Y~  152 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-----------PIEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-----------Ccccccccc
Confidence            99999974321                        233444444 447899999877631           11112235 


Q ss_pred             ccHHHHHHHHH-------h--cCCceEEeecceeeCCCCCCchHHHHH-----HHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFF-----HRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       130 ~~k~~~e~~~~-------~--~~~~~~ilR~~~i~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      .+|..++.+.+       .  ++++++.+.|+.+..+.     ....+     ....... ...    ...-.+..++|+
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~-~~~----~~~gr~~~pedv  222 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-----MQASLPKGVSKEMVLHD-PKL----NRAGRAYMPERI  222 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-----HHHHSCTTCCHHHHBCB-TTT----BTTCCEECHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-----HHhhCcchhhHHHHHhC-ccc----cccCCCCCHHHH
Confidence            88888876653       2  35899999999886651     00000     0000100 000    011136678999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCC
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGE  218 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~  218 (246)
                      |++++.++..  ....|+.+++.+|
T Consensus       223 A~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         223 AQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHhChhhCCCcCcEEEECcc
Confidence            9999999854  3457889999887

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.51  E-value=7.9e-14  Score=104.32  Aligned_cols=201  Identities=14%  Similarity=0.192  Sum_probs=128.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|+++|++|++..|+..+..+...    .-......++..+.+|+++++++++++++     .++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            7999999999999999999999999998876422111    00112246788999999999988877753     26999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++.....                        ++.++..+.   ....++..|+...+......    .........
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~~~~~~~~~  166 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNGSLTQVF  166 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTEECSCHH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----cccCccccc
Confidence            99999864221                        222333332   33455656654442111000    000011223


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|...+.+.+       ..|+++..+.||.+-.+... ..............++.         -+..++|+|++++
T Consensus       167 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~---------R~g~pedvA~~v~  236 (260)
T d1h5qa_         167 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-HMDKKIRDHQASNIPLN---------RFAQPEEMTGQAI  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-GSCHHHHHHHHHTCTTS---------SCBCGGGGHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-ccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            4 88988887653       47899999999988765311 11223333443433331         1345899999999


Q ss_pred             HHhcC--CCCCCeeEEeeCCe
Q 025908          201 QVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (246)
                      .++.+  ....|+.+.+.+|.
T Consensus       237 fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhcchhCCCcCceEEECCCe
Confidence            99854  33578899999985

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.50  E-value=1.7e-13  Score=102.35  Aligned_cols=194  Identities=12%  Similarity=0.090  Sum_probs=122.8

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|  -||+++++.|+++|++|.+..|+...... .     .+..........+.+|++|+++++++++.     .++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-A-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-H-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-H-----HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            69987  69999999999999999888776433111 0     11111234677899999999888877753     369


Q ss_pred             cEEEecCCCCcc------------------------chHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+++....                        ....+.+++.    +..++|++||......           ...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-----------~~~  156 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-----------CCC
Confidence            999999986321                        0112222221    3357999998776321           111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|..++.+.+       ..|+++..+.|+.+..+..... ..........+..++.         -+..++|+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA  227 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------RNITQEEVG  227 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            2235 88998887653       4689999999998877642211 1123333333333331         144589999


Q ss_pred             HHHHHHhcC--CCCCCeeEEeeCCee
Q 025908          197 RAFVQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       197 ~~~~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      ++++.++..  ....|+.+.+.+|..
T Consensus       228 ~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         228 NLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCchhCCccCCeEEECcCEe
Confidence            999999964  335788999998864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.49  E-value=1.6e-12  Score=97.81  Aligned_cols=196  Identities=17%  Similarity=0.125  Sum_probs=126.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++.+|+..+..+...    .........+..+.+|+++++++.+++++     .++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHH----HHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            7999999999999999999999999887654221111    11122246788999999999888877754     27999


Q ss_pred             EEecCCCCccc------------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-c
Q 025908           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (246)
Q Consensus        76 vi~~~~~~~~~------------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (246)
                      ++|+++.....                        .+.++..+....+.+.++|.....          .+......| .
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~~~~~~~Y~a  169 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KAVPKHAVYSG  169 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SSCSSCHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------ccccchhhHHH
Confidence            99999874221                        233444455445777777654310          111122335 8


Q ss_pred             cHHHHHHHHH-------hcCCceEEeecceeeCCC----------CCCch-HHHHHH-HHHhCCCcccCCCCCceeeeee
Q 025908          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPL----------NYNPV-EEWFFH-RLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~----------~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                      +|..++.+.+       ..|++++.|.||.+-.+.          ..... ...... ......++         .-+..
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~  240 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBC
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcC
Confidence            8988887764       478999999999886541          00000 011111 11111222         12566


Q ss_pred             HHHHHHHHHHHhcCC--CCCCeeEEeeCCe
Q 025908          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~~~~~~  219 (246)
                      .+|+|++++.++...  ...|+.+.+.||.
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            899999999999643  3578899998875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.48  E-value=2.3e-13  Score=102.51  Aligned_cols=200  Identities=16%  Similarity=0.126  Sum_probs=124.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|+++|++|++..|+.++..+...+. . .......++..+.+|+++++++++++++     .++|+
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i-~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   87 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQI-L-KAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDI   87 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-H-HTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-H-HcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceE
Confidence            799999999999999999999999999865532111000 0 0000124688999999999888877754     27999


Q ss_pred             EEecCCCCcc----------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (246)
Q Consensus        76 vi~~~~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (246)
                      +||++|....                      +    ++.++..+.  +..+++++||.....           +.....
T Consensus        88 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------~~~~~~  156 (274)
T d1xhla_          88 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------AHSGYP  156 (274)
T ss_dssp             EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------CCTTSH
T ss_pred             EEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------cCCCCc
Confidence            9999885311                      0    222233332  445677777654321           111123


Q ss_pred             cc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC----CC-chHHHHHHHHHhC-CCcccCCCCCceeeeeeHH
Q 025908          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YN-PVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~  193 (246)
                      .| .+|..++.+.+       ..|++++.+.||.+-.|..    .. ............. ..+++ +      -+..++
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-g------R~g~pe  229 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-G------HCGKPE  229 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S------SCBCHH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-C------CCcCHH
Confidence            45 78998887653       4689999999999876521    00 0111111111111 11221 1      244589


Q ss_pred             HHHHHHHHHhcC---CCCCCeeEEeeCCee
Q 025908          194 DLARAFVQVLGN---EKASRQVFNISGEKY  220 (246)
Q Consensus       194 D~a~~~~~~~~~---~~~~~~~~~~~~~~~  220 (246)
                      |+|++++.++..   ....|+.+.+.||..
T Consensus       230 diA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         230 EIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            999999999852   346789999999854

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.47  E-value=5.4e-14  Score=104.70  Aligned_cols=189  Identities=14%  Similarity=0.082  Sum_probs=120.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|.+..|+.....+ +.        .  .......+|+.+.+++++++++     .++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~-~~--------~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LE--------A--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HH--------H--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH--------h--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999887655211 11        0  1122345677765555444432     27999


Q ss_pred             EEecCCCCcc---------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +||+++....                     +    ++.++..+.  +..++|++||...+...           .....
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~-----------~~~~~  143 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------KELST  143 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------TTCHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc-----------ccccc
Confidence            9999875321                     0    222333333  45689999987764221           11123


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCch-------HHHHHHHHHhCCCcccCCCCCceeeeeeHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (246)
                      | .+|..++.+.+       ..|+++..+.|+.+-.+......       .........+..++.         -+...+
T Consensus       144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~g~pe  214 (252)
T d1zmta1         144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RLGTQK  214 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SCBCHH
T ss_pred             cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CCcCHH
Confidence            5 88988887653       47899999999998776422111       112223333323321         144589


Q ss_pred             HHHHHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          194 DLARAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      |+|++++.++...  ...|+.+.+.||-.
T Consensus       215 dvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         215 ELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            9999999999653  35789999999853

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.47  E-value=2e-13  Score=100.75  Aligned_cols=172  Identities=15%  Similarity=0.139  Sum_probs=116.3

Q ss_pred             CCccccchHHHHHHHHHCCCe-------EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---   70 (246)
                      |||++-||+++++.|.++|++       |....|+..+..+..     .+.......+..+.+|++|++++++++++   
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       888888765532111     11111235688899999999888877753   


Q ss_pred             --CCccEEEecCCCCcc------------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           71 --KGFDVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                        .++|++||+++....                        .++.++..++  +..++|++||...+...          
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------  151 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------  151 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----------
Confidence              269999999987422                        1333444443  55689999987764211          


Q ss_pred             CCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHH
Q 025908          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (246)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (246)
                       .....| .+|...+.+.+       ..|++++.+.||.+-.+....               +   . ......+..++|
T Consensus       152 -~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~---~-~~~~~~~~~Ped  211 (240)
T d2bd0a1         152 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V---D-DEMQALMMMPED  211 (240)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C---C-STTGGGSBCHHH
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c---C-HhhHhcCCCHHH
Confidence             112235 88988876653       468999999999887663110               0   0 011123456899


Q ss_pred             HHHHHHHHhcCCC
Q 025908          195 LARAFVQVLGNEK  207 (246)
Q Consensus       195 ~a~~~~~~~~~~~  207 (246)
                      +|++++.++.++.
T Consensus       212 vA~~v~~l~s~~~  224 (240)
T d2bd0a1         212 IAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHcCCc
Confidence            9999999997654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.46  E-value=2.7e-13  Score=101.98  Aligned_cols=201  Identities=15%  Similarity=0.127  Sum_probs=123.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|++.+|+.++..+.....  ........++..+.+|+++++++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l--~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   88 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQII--LKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDV   88 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            799999999999999999999999999876532110000  00000124688999999999888877754     27999


Q ss_pred             EEecCCCCcc------------------------c----hHHHHHhCC-CCceEEEEee-cceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~------------------------~----~~~l~~a~~-~~~~~i~~Ss-~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||++|....                        +    ++.++..+. +...+|.++| .+...           +...
T Consensus        89 lvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~-----------~~~~  157 (272)
T d1xkqa_          89 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ-----------AQPD  157 (272)
T ss_dssp             EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS-----------CCCS
T ss_pred             EEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc-----------CCCC
Confidence            9999986421                        0    112222232 2235555554 33221           1111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCC----CCc-hHHHHHHHHHhC-CCcccCCCCCceeeeee
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNP-VEEWFFHRLKAG-RPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~----~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~  191 (246)
                      ...| .+|..++.+.+       ..|+++..+.||.+-.+..    ... ............ ..+++ +      -+..
T Consensus       158 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-g------R~g~  230 (272)
T d1xkqa_         158 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-G------AAGK  230 (272)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S------SCBC
T ss_pred             cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-C------CCcC
Confidence            2335 88998887653       4689999999998876521    010 111111111111 11211 1      2456


Q ss_pred             HHHHHHHHHHHhcC---CCCCCeeEEeeCCeee
Q 025908          192 VKDLARAFVQVLGN---EKASRQVFNISGEKYV  221 (246)
Q Consensus       192 ~~D~a~~~~~~~~~---~~~~~~~~~~~~~~~~  221 (246)
                      ++|+|++++.++..   ....|+++.+.||..+
T Consensus       231 pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         231 PEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            89999999999853   2357899999998643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.46  E-value=2.7e-13  Score=103.33  Aligned_cols=197  Identities=16%  Similarity=0.150  Sum_probs=124.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||+|.||+++++.|+++|++|++++|+..+..+...+    -.......+..+.+|+++.++++.+++.     .++|+
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~----l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ----ISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----HHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            79999999999999999999999999987653221110    0011246788899999999888776643     37999


Q ss_pred             EEecCCCCccc--------------------hHHHHHh----C--C-CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           76 VYDINGREADE--------------------VEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        76 vi~~~~~~~~~--------------------~~~l~~a----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++|+++.....                    ...+...    +  . ....++.+|+......          ......|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~----------~~~~~~Y  176 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----------SGFVVPS  176 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------CTTCHHH
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----------ccccchH
Confidence            99999874321                    0011111    1  1 3445666666544211          1111123


Q ss_pred             cccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc--hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHH
Q 025908          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (246)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (246)
                      ..+|...+.+.+       ..|+++..|.||.+..+.....  .............++.         -+..++|+|+++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v  247 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANLA  247 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHHH
Confidence            388999887764       4689999999999977642110  1111222332322221         244589999999


Q ss_pred             HHHhcC--CCCCCeeEEeeCCee
Q 025908          200 VQVLGN--EKASRQVFNISGEKY  220 (246)
Q Consensus       200 ~~~~~~--~~~~~~~~~~~~~~~  220 (246)
                      ..++..  ....|+++.+.||..
T Consensus       248 ~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         248 AFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHhCchhcCCCCcEEEECCChh
Confidence            999954  345789999999864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.43  E-value=3.9e-13  Score=101.31  Aligned_cols=191  Identities=19%  Similarity=0.179  Sum_probs=123.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||+++++.|.++|++|+++.|+.++..+.        ..+...++..+.+|+++.+++++++++     .++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL--------ETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            79999999999999999999999999986553211        112346789999999999888777653     27999


Q ss_pred             EEecCCCCcc-------------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        76 vi~~~~~~~~-------------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      +||++|....                         +    ++.++..++ +..++|++||...+-.           ...
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~-----------~~~  151 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP-----------NGG  151 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST-----------TSS
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC-----------CCC
Confidence            9999985311                         0    122233333 2357888887654211           111


Q ss_pred             CCcc-ccHHHHHHHHHh------cCCceEEeecceeeCCCCCCchH---------HHHHHHHHhCCCcccCCCCCceeee
Q 025908          126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~~------~~~~~~ilR~~~i~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ...| .+|..++.+.+.      .++++..+.|+.+-.+.......         ..+...+....++.         -+
T Consensus       152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~  222 (276)
T d1bdba_         152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG---------RM  222 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS---------SC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC---------CC
Confidence            1234 889888776531      35999999999986653111100         01112222222221         13


Q ss_pred             eeHHHHHHHHHHHhcC---CCCCCeeEEeeCCe
Q 025908          190 GHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~---~~~~~~~~~~~~~~  219 (246)
                      ..++|+|++++.++..   ....|+.+++.||-
T Consensus       223 g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         223 PEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             CCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             cCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            4489999999988742   34678999998874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.1e-13  Score=99.55  Aligned_cols=178  Identities=17%  Similarity=0.172  Sum_probs=113.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhh--hcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||++.||.++++.|.++|++|++..|+..+..+...     +...  ....+..+.+|++++++++++++.     .++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~-----~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA-----ECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998765322110     0111  124688899999999888877753     279


Q ss_pred             cEEEecCCCCccc------------------------hHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~~------------------------~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |++||+++.....                        ++.++..+.    ...++|++||...+..         .|...
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~p~~~  161 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  161 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------CCCcc
Confidence            9999999874321                        222333322    3468999998775311         11111


Q ss_pred             CCcc-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHH----HHHHHhCCCcccCCCCCceeeeee
Q 025908          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWF----FHRLKAGRPIPIPGSGIQVTQLGH  191 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~  191 (246)
                      ...| .+|..++.+.+         ..++++..+-|+.+-.+.     ...+    .......  .       ....+..
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~-----~~~~~~~~~~~~~~~--~-------~~~r~~~  227 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF-----AFKLHDKDPEKAAAT--Y-------EQMKCLK  227 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH-----HHHHTTTCHHHHHHH--H-------C---CBC
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh-----hhhcChhhHHHHHhc--C-------CCCCCcC
Confidence            2235 78888876542         357899999998765431     1100    0011000  0       1123567


Q ss_pred             HHHHHHHHHHHhcCC
Q 025908          192 VKDLARAFVQVLGNE  206 (246)
Q Consensus       192 ~~D~a~~~~~~~~~~  206 (246)
                      ++|+|++++.++.++
T Consensus       228 pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         228 PEDVAEAVIYVLSTP  242 (257)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhCCh
Confidence            999999999999765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.39  E-value=1.6e-12  Score=98.94  Aligned_cols=206  Identities=12%  Similarity=0.091  Sum_probs=130.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCC-CCchhhhhhcCceEEEEccCCCHHHHHHhhh----c-CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A-KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~----~-~~~d   74 (246)
                      |||++.||+++++.|.++|++|++.+|+.+........ ..+....+.........+|+.+.++.+++++    + .++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999998876542111110 0001111222334556678877665555443    2 2699


Q ss_pred             EEEecCCCCccc------------------------hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      ++||+||.....                        ++.++..++  +..++|++||...+-...           ....
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~-----------~~~~  161 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------GQAN  161 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC-----------CcHH
Confidence            999999974321                        233334443  556999999977642211           1123


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      | .+|..++.+.+       ..|++++.+.|+.+-.+..  ....                  ......+.++|+|++++
T Consensus       162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~--~~~~------------------~~~~~~~~PedvA~~v~  221 (302)
T d1gz6a_         162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE--TVMP------------------EDLVEALKPEYVAPLVL  221 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG--GGSC------------------HHHHHHSCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh--hcCc------------------HhhHhcCCHHHHHHHHH
Confidence            4 88998887653       4789999999986533210  0000                  01122344799999999


Q ss_pred             HHhcC-CCCCCeeEEeeCC-------------------eeecHHHHHHHHHHHhCCC
Q 025908          201 QVLGN-EKASRQVFNISGE-------------------KYVTFDGLARACAKVTGYC  237 (246)
Q Consensus       201 ~~~~~-~~~~~~~~~~~~~-------------------~~~s~~~l~~~~~~~~g~~  237 (246)
                      +++.. ....|+++.+.+|                   .+.|..++.+.+.+.....
T Consensus       222 fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         222 WLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             HHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             HHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            98853 2346777777665                   2467889999998887654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.39  E-value=9.1e-13  Score=97.97  Aligned_cols=194  Identities=16%  Similarity=0.102  Sum_probs=122.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-CHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~-----~~~d   74 (246)
                      |||++-||.+++++|+++|.+|+++.|+.++... +.   .........++.++.+|++ +.++++++++.     .++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LA---ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HH---HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HH---HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999988766311 10   0011112357889999997 55556555532     2799


Q ss_pred             EEEecCCCCccc----------------hHHHHHhCC-----CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccH
Q 025908           75 VVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (246)
Q Consensus        75 ~vi~~~~~~~~~----------------~~~l~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (246)
                      ++|++||.....                ++.++..+.     ...++|++||...+.+           ......| .+|
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~asK  155 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------IHQVPVYSASK  155 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTSHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-----------CCCCHHHHHHH
Confidence            999999974321                233344433     2357999998776421           1112234 888


Q ss_pred             HHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcc-cCCCCCceeeeeeHHHHHHHHHHHhc
Q 025908          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLG  204 (246)
Q Consensus       133 ~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (246)
                      .....+.+       ..+++++.+.||.+..+.         ........... ..............+++|++++.+++
T Consensus       156 aal~~~t~~la~el~~~gIrVn~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~  226 (254)
T d1sbya1         156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPL---------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH---------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc---------ccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence            88876543       468999999999987751         10000000000 00000001224468999999998887


Q ss_pred             CCCCCCeeEEeeCCe
Q 025908          205 NEKASRQVFNISGEK  219 (246)
Q Consensus       205 ~~~~~~~~~~~~~~~  219 (246)
                      ... .|+++.+.+|.
T Consensus       227 ~~~-tG~vi~vdgG~  240 (254)
T d1sbya1         227 ANK-NGAIWKLDLGT  240 (254)
T ss_dssp             HCC-TTCEEEEETTE
T ss_pred             CCC-CCCEEEECCCE
Confidence            654 68899999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.36  E-value=5.3e-12  Score=94.29  Aligned_cols=182  Identities=16%  Similarity=0.129  Sum_probs=116.8

Q ss_pred             CCccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~----~~~d~   75 (246)
                      |||+|.||.++++.|.++|+ +|+++.|+...... .. ....+..+....+.++.+|++|.+++.++++.    .++|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~-~~-~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-AG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHH-HH-HHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 57778886433110 00 00112223345789999999999998888764    25899


Q ss_pred             EEecCCCCcc--------------------chHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCccccHH
Q 025908           76 VYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKL  133 (246)
Q Consensus        76 vi~~~~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~  133 (246)
                      |+|+++....                    +..++.+++.  ...++|++||....-...+          ...|..+|.
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~----------~~~YaAaka  162 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------LGGYAPGNA  162 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------CTTTHHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc----------cHHHHHHHH
Confidence            9999987432                    2334555554  5678999999776422111          112448888


Q ss_pred             HHHHHH---HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCCC
Q 025908          134 NTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (246)
Q Consensus       134 ~~e~~~---~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (246)
                      ..+.+.   +..|++++.|.||.+.+++....    ..    . ..+..     .-...+..+++++++..++..+..
T Consensus       163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~----~~----~-~~~~~-----~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         163 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG----PV----A-DRFRR-----HGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC---------------------CTT-----TTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             hHHHHHHHHHhCCCCEEECCCCcccCCccccc----hH----H-HHHHh-----cCCCCCCHHHHHHHHHHHHhCCCc
Confidence            877665   45789999999998876532111    00    0 00110     113467899999999999987654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.34  E-value=2.2e-11  Score=89.79  Aligned_cols=183  Identities=16%  Similarity=0.163  Sum_probs=116.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh----cCCccEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV   76 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~----~~~~d~v   76 (246)
                      |||++.||+++++.|.++|++|++.+|+.+.                 .......+|+.+......+..    ....+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998655                 455667889987655544442    2244555


Q ss_pred             EecCCCCcc----------------------------chHHHHHh------CC--CCceEEEEeecceeccCCCCCCCCC
Q 025908           77 YDINGREAD----------------------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (246)
Q Consensus        77 i~~~~~~~~----------------------------~~~~l~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (246)
                      +..++....                            ..+.++..      +.  +..++|++||...+....       
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-------  142 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  142 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence            554433110                            01112222      11  345899999977642211       


Q ss_pred             CCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeH
Q 025908          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (246)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (246)
                          ....| .+|..++.+.+       ..|++++.+.||.+..+..... ............+  +.+      -+..+
T Consensus       143 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~--~~~------R~g~p  209 (241)
T d1uaya_         143 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PEKAKASLAAQVP--FPP------RLGRP  209 (241)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CHHHHHHHHTTCC--SSC------SCCCH
T ss_pred             ----CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-hhhHHHHHHhcCC--CCC------CCcCH
Confidence                11234 88999887654       4689999999998866521111 1112222222222  111      13458


Q ss_pred             HHHHHHHHHHhcCCCCCCeeEEeeCCee
Q 025908          193 KDLARAFVQVLGNEKASRQVFNISGEKY  220 (246)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~~~~~~~  220 (246)
                      +|+|++++.++......|+++.+.||-.
T Consensus       210 edvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         210 EEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence            9999999999987767899999998854

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=4.3e-11  Score=89.20  Aligned_cols=195  Identities=14%  Similarity=0.114  Sum_probs=124.8

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|  -||+++++.|+++|++|++..|+.... +..     .+.............|..+.++....+.+     ...
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79998  688999999999999999999975431 111     11122245677888899887666555532     368


Q ss_pred             cEEEecCCCCccc-------------------------hHHHHHhCC----CCceEEEEeecceeccCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREADE-------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (246)
Q Consensus        74 d~vi~~~~~~~~~-------------------------~~~l~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (246)
                      |.++|+++.....                         ...+.+++.    +...++++||.....           +..
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-----------~~~  153 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------AIP  153 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCT
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc-----------CCC
Confidence            9999998764210                         112222222    335688888766521           111


Q ss_pred             CCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHH
Q 025908          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (246)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (246)
                      ....| .+|...+.+.+       .+|+++..++||.+..+..... .............++   +      -+..++|+
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---~------R~~~peei  224 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---R------RTVTIEDV  224 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---S------SCCCHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC---C------CCcCHHHH
Confidence            12335 89999988764       3689999999999987642221 122223333332222   1      14558999


Q ss_pred             HHHHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          196 ARAFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                      |+++..++.+  ....|+++.+.+|..+
T Consensus       225 a~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         225 GNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCchhcCccCceEEECcCHHH
Confidence            9999999954  3467899999998643

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=9.3e-13  Score=97.18  Aligned_cols=170  Identities=15%  Similarity=0.146  Sum_probs=113.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++-||+++++.|.++|++|++.+|+.++..+..     .+......++..+.+|++|.+++.++++.     .++|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999999876632111     11222346789999999999888877753     26999


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (246)
                      +||++|....                    +    ++.++..+.  +..++|++||...+-           +......|
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~-----------~~~~~~~Y  156 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVPFLLAY  156 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHHHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC-----------CCCCcHHH
Confidence            9999997432                    1    222333333  556899999877631           11111235


Q ss_pred             -ccHHHHHHHHH-------h---cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          130 -KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       130 -~~k~~~e~~~~-------~---~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                       .+|...+.+.+       .   .|++++.+.||.+-.+....             ...       .....+..+|+|+.
T Consensus       157 ~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-------------~~~-------~~~~~~~pe~va~~  216 (244)
T d1yb1a_         157 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------PST-------SLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------THH-------HHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-------------cCc-------cccCCCCHHHHHHH
Confidence             88888776542       1   47899999999765542111             000       11123457999999


Q ss_pred             HHHHhcCC
Q 025908          199 FVQVLGNE  206 (246)
Q Consensus       199 ~~~~~~~~  206 (246)
                      +...+..+
T Consensus       217 i~~~~~~~  224 (244)
T d1yb1a_         217 LMHGILTE  224 (244)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            99887664

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.5e-12  Score=95.79  Aligned_cols=144  Identities=17%  Similarity=0.112  Sum_probs=94.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEe---cCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc---CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFT---RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~---r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~---~~~d   74 (246)
                      |||++-||+++++.|.++|.+|+.+.   |+..... .+.+ ..........++..+.+|++|.+++.+++++   ..+|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG-RLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTH-HHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhH-HHHH-HHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            79999999999999999998755544   3322210 0000 0000011135789999999999998887754   3699


Q ss_pred             EEEecCCCCcc--------------------c----hHHHHHhCC--CCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        75 ~vi~~~~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      +++++++....                    +    ++.++..+.  +..++|++||...+-+           ......
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-----------~~~~~~  154 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------LPFNDV  154 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------CTTCHH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-----------CCCchH
Confidence            99999987432                    1    223333343  5679999999776311           111233


Q ss_pred             c-ccHHHHHHHHH-------hcCCceEEeecceeeCC
Q 025908          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~  157 (246)
                      | .+|..++.+.+       ..|++++.+.||.+-.+
T Consensus       155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence            5 88998887653       47899999999988665

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.1e-10  Score=86.49  Aligned_cols=187  Identities=16%  Similarity=0.191  Sum_probs=116.6

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      |||++.||.++++.|.++|++|++++|+.++..+        ...++........+|+.+.+.+++....     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--------QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCCcccccccccccccccccccccccccccccc
Confidence            7999999999999999999999999998776322        1223346788888999886655444422     36788


Q ss_pred             EEecCCCCcc--------------------------c----hHHHHHhCC--------CCceEEEEeecceeccCCCCCC
Q 025908           76 VYDINGREAD--------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH  117 (246)
Q Consensus        76 vi~~~~~~~~--------------------------~----~~~l~~a~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (246)
                      +++.++....                          +    ++.++..+.        +..++|++||...+.+.     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~-----  157 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  157 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC-----
Confidence            8877654211                          1    111222211        23479999998764221     


Q ss_pred             CCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeee
Q 025908          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                            .....| .+|..++.+.+       ..|++++.+.||.+..+.... .............+  +.+      -+
T Consensus       158 ------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p--l~~------R~  222 (248)
T d2o23a1         158 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP--FPS------RL  222 (248)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--SSC------SC
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCC--CCC------CC
Confidence                  112335 89999988764       468999999999887653211 11111122222221  111      14


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCeeEEe
Q 025908          190 GHVKDLARAFVQVLGNEKASRQVFNI  215 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~~  215 (246)
                      ..++|+|++++.+++.+...|++.++
T Consensus       223 g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            56899999999998876666776654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=8.1e-12  Score=93.20  Aligned_cols=192  Identities=15%  Similarity=0.078  Sum_probs=116.0

Q ss_pred             CCccccchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------
Q 025908            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------   70 (246)
                      |||++.||+++++.|.+   +|++|+++.|+.++..+...+   .........+..+.+|++++++++++++.       
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~---l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~   88 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEE---LGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRP   88 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHH---HHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHH---HHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhh
Confidence            79999999999999986   699999999987653211100   00000124688899999999888877632       


Q ss_pred             --CCccEEEecCCCCcc-----------------------c----hHHHHHhCC--C--CceEEEEeecceeccCCCCCC
Q 025908           71 --KGFDVVYDINGREAD-----------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPH  117 (246)
Q Consensus        71 --~~~d~vi~~~~~~~~-----------------------~----~~~l~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~  117 (246)
                        ...|+++++++....                       +    ++.++..+.  +  ..++|++||...+.       
T Consensus        89 ~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-------  161 (259)
T d1oaaa_          89 EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-------  161 (259)
T ss_dssp             TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-------
T ss_pred             ccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-------
Confidence              246789998875210                       1    233444444  2  35899999876631       


Q ss_pred             CCCCCCCCCCcc-ccHHHHHHHHH-----hcCCceEEeecceeeCCCCCC----chHHHHHHHHHhCCCcccCCCCCcee
Q 025908          118 CETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVT  187 (246)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~~~~-----~~~~~~~ilR~~~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                          +......| .+|..++.+.+     ..+++++.+.||.+..+....    ..............+.         .
T Consensus       162 ----~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~  228 (259)
T d1oaaa_         162 ----PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD---------G  228 (259)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT---------T
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC---------C
Confidence                11112335 88988887653     468999999999886652000    0000011111110000         1


Q ss_pred             eeeeHHHHHHHHHHHhcCC-CCCCeeEEe
Q 025908          188 QLGHVKDLARAFVQVLGNE-KASRQVFNI  215 (246)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~-~~~~~~~~~  215 (246)
                      .+..++|+|++++.++... ...|+.+++
T Consensus       229 r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         229 ALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            2356899999999988543 235555544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.24  E-value=6.5e-11  Score=86.90  Aligned_cols=171  Identities=14%  Similarity=0.122  Sum_probs=106.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHH-------HHhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-------KSSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-------~~~~~~~~~   73 (246)
                      |||+|-||+++++.|.++|++|++++|+..+..               .....+.+|..+.+..       ...++..++
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999876521               2233344555543322       222222368


Q ss_pred             cEEEecCCCCccc-------------------------hHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        74 d~vi~~~~~~~~~-------------------------~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |++||+||....+                         .+.++..+++..++|++||...+..           ......
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~~~~  141 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  141 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC-----------cccccc
Confidence            9999999853210                         1122233333468999998776421           111233


Q ss_pred             c-ccHHHHHHHHHh---------cCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~~---------~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|..++.+.+.         .++++..+.|+.+-.+         +........         ....++..+|+++.
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~---------~~~~~~~~~~va~~  203 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNA---------DHSSWTPLSFISEH  203 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCC---------ccccCCCHHHHHHH
Confidence            5 899999887642         3567888899876443         222221111         22346779999999


Q ss_pred             HHHHhcCC---CCCCeeEEe
Q 025908          199 FVQVLGNE---KASRQVFNI  215 (246)
Q Consensus       199 ~~~~~~~~---~~~~~~~~~  215 (246)
                      ++.++..+   ...|..+.+
T Consensus       204 ~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         204 LLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHhcCccccCCCceEEEE
Confidence            88766443   235666666

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.24  E-value=7.9e-11  Score=86.47  Aligned_cols=171  Identities=11%  Similarity=0.061  Sum_probs=107.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHH-------HhhhcCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-------SSLSAKGF   73 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-------~~~~~~~~   73 (246)
                      |||+|.||+++++.|.++|++|.++++...+.               ........+|..+.+..+       +.+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999998876542               122333444544333322       22222368


Q ss_pred             cEEEecCCCCcc-------------------------chHHHHHhCCCCceEEEEeecceeccCCCCCCCCCCCCCCCCc
Q 025908           74 DVVYDINGREAD-------------------------EVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (246)
Q Consensus        74 d~vi~~~~~~~~-------------------------~~~~l~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (246)
                      |++||++|....                         ..+.++..+++..++|++||...+..           ......
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----------~~~~~~  141 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  141 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC-----------ccCCcc
Confidence            999999985211                         01222233344468999998776421           111223


Q ss_pred             c-ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      | .+|..++.+.+         ..+++++.+.|+.+..|         +........         ..-.++.++++++.
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~pe~va~~  203 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTPLEFLVET  203 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCccc---------hhhcCCCHHHHHHH
Confidence            5 89999988764         24799999999988765         112221111         12246778999999


Q ss_pred             HHHHhcCC--CCCCeeEEe
Q 025908          199 FVQVLGNE--KASRQVFNI  215 (246)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~  215 (246)
                      +..++...  ...|..+.+
T Consensus       204 ~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHhCCCccCCCCCeEEE
Confidence            99998653  245666554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.20  E-value=1.3e-10  Score=86.89  Aligned_cols=195  Identities=15%  Similarity=0.154  Sum_probs=115.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhh-hhcCceEEEEccCCC----HHHHHHhhh----c-
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLS----A-   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~----~~~~~~~~~----~-   70 (246)
                      |||++-||+++++.|+++|++|+++.|+..+..+.+..    +.. ...........|..+    .+.+.++++    + 
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVA----ELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH----HHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999987653221110    011 112455666666543    333333332    1 


Q ss_pred             CCccEEEecCCCCccc-----------------------------------hHHHHHhCC-------CCceEEEEeecce
Q 025908           71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV  108 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~~-----------------------------------~~~l~~a~~-------~~~~~i~~Ss~~v  108 (246)
                      .++|++||++|.....                                   .......+.       ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            3799999999863210                                   000111111       1234444554333


Q ss_pred             eccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccC
Q 025908          109 YLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP  180 (246)
Q Consensus       109 ~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                      ..           +......| .+|...+.+.+       ..|+++..+.||.+..+....   ........+..++   
T Consensus       163 ~~-----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~pl---  225 (266)
T d1mxha_         163 DL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQEEYRRKVPL---  225 (266)
T ss_dssp             GS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHHHTTCTT---
T ss_pred             cc-----------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHHHHHhcCCC---
Confidence            11           11112234 78998887653       468999999999887664322   2233333333322   


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeee
Q 025908          181 GSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (246)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (246)
                      +     +-+..++|+|++++.++.+.  ...|+++.+.+|..+
T Consensus       226 ~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         226 G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            1     12345899999999999653  357889999998643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.18  E-value=5.5e-10  Score=83.81  Aligned_cols=194  Identities=12%  Similarity=0.074  Sum_probs=119.7

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCc
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~   73 (246)
                      |||+|  -||.++++.|+++|++|++..|+.... +..     .+..+......+..+|+++.+++.+++++     ..+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~-~~~-----~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHH-----HHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68877  699999999999999999999975321 111     11122245677889999998777666632     279


Q ss_pred             cEEEecCCCCccc------------------------hHHHHHh-CC--CC-ceEEEEeecceeccCCCCCCCCCCCCCC
Q 025908           74 DVVYDINGREADE------------------------VEPILDA-LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (246)
Q Consensus        74 d~vi~~~~~~~~~------------------------~~~l~~a-~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (246)
                      |+++++++.....                        ....... ..  +. ..++.+|+.....           +...
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----------~~~~  153 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------YMAH  153 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCTT
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----------cccc
Confidence            9999998864220                        1111111 11  22 2344444444321           1111


Q ss_pred             CCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchH-HHHHHHHHhCCCcccCCCCCceeeeeeHHHHH
Q 025908          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (246)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (246)
                      ...| .+|..++.+.+       ..|+++..+.|+.+..+....... ...........+.         ..+...+|+|
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA  224 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  224 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHH
Confidence            2234 78888887764       368999999999887764221111 2222222222222         1245689999


Q ss_pred             HHHHHHhcCC--CCCCeeEEeeCCee
Q 025908          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (246)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~  220 (246)
                      +++..++...  ...|+++.+.+|..
T Consensus       225 ~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         225 NAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCceEEECCChh
Confidence            9999999653  35788999999863

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.17  E-value=2.5e-10  Score=86.14  Aligned_cols=200  Identities=12%  Similarity=0.033  Sum_probs=115.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhh--------------hhhcCceEEEEccCCCHHHHHH
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF--------------AEFSSKILHLKGDRKDYDFVKS   66 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~D~~~~~~~~~   66 (246)
                      |||++-||+++++.|.++|++|++..|+.....+.+........              ......+....+|+++.+++++
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~   87 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAE   87 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHH
Confidence            79999999999999999999999988875432111100000000              0001123335566888777777


Q ss_pred             hhhc-----CCccEEEecCCCCccc-----------------------hHHHH-----------Hh----------CC--
Q 025908           67 SLSA-----KGFDVVYDINGREADE-----------------------VEPIL-----------DA----------LP--   95 (246)
Q Consensus        67 ~~~~-----~~~d~vi~~~~~~~~~-----------------------~~~l~-----------~a----------~~--   95 (246)
                      ++++     .++|++||++|.....                       ...++           ++          ..  
T Consensus        88 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~  167 (284)
T d1e7wa_          88 LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG  167 (284)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSC
T ss_pred             HHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcC
Confidence            6643     3799999999864210                       00011           11          11  


Q ss_pred             CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHHHH
Q 025908           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF  167 (246)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~~~  167 (246)
                      +..+++.+++....           .+......| .+|...+.+.+       ..|+++..+.||..-...   ......
T Consensus       168 ~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~~~~  233 (284)
T d1e7wa_         168 TNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMPPAV  233 (284)
T ss_dssp             SCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSCHHH
T ss_pred             CCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCCHHH
Confidence            22356666654431           111112235 88998887653       468999999998632221   112233


Q ss_pred             HHHHHhCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCeeec
Q 025908          168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVT  222 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~~s  222 (246)
                      ........++  .+      -+..++|+|++++.++..  ....|+.+.+.||..++
T Consensus       234 ~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         234 WEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            3333333221  11      144589999999999854  34578999999986543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.14  E-value=7.4e-10  Score=81.92  Aligned_cols=184  Identities=16%  Similarity=0.098  Sum_probs=108.6

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------C
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~   71 (246)
                      |||++-||.+++++|+++|+  .|++.+|+.++..+ +.+       ....++.++.+|+++.++++++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~-l~~-------~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS-------IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHT-------CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH-HHH-------hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999995  68888888766322 111       0135799999999998887766542       2


Q ss_pred             CccEEEecCCCCcc---------------------ch----HHHHHhCC-------------CCceEEEEeecceeccCC
Q 025908           72 GFDVVYDINGREAD---------------------EV----EPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (246)
Q Consensus        72 ~~d~vi~~~~~~~~---------------------~~----~~l~~a~~-------------~~~~~i~~Ss~~v~~~~~  113 (246)
                      ++|++||+||....                     +.    +.++..++             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            48999999986321                     11    11221111             124566666654421111


Q ss_pred             CCCCCCCCCCCCCCcc-ccHHHHHHHH-------HhcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCc
Q 025908          114 LLPHCETDTVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (246)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .    ...+..+...| .+|.....+.       +..|++++.+.||.+-.+.         ..                
T Consensus       161 ~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m---------~~----------------  211 (250)
T d1yo6a1         161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL---------GG----------------  211 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC---------CC----------------
Confidence            0    01112222235 8898887654       3578999999999764431         00                


Q ss_pred             eeeeeeHHHHHHHHHHHhcCC--CCCCeeEEeeCCeeec
Q 025908          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (246)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (246)
                      ....+++++.++.++..+...  ...|+.|+. +++|+.
T Consensus       212 ~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~~  249 (250)
T d1yo6a1         212 KNAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE  249 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeCC
Confidence            011345788888888888653  334555543 445543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.09  E-value=7.5e-10  Score=82.77  Aligned_cols=196  Identities=15%  Similarity=0.087  Sum_probs=115.0

Q ss_pred             CCccc--cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc--------
Q 025908            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (246)
Q Consensus         1 ~GatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~--------   70 (246)
                      |||+|  .||.++++.|.++|.+|++..|+..+..+.+.+       ........+.+|+.+.++...+++.        
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~-------~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH-------HcCCceeeEeeecccccccccccchhhhccccC
Confidence            68655  599999999999999999999887653221111       1135677899999987655554432        


Q ss_pred             CCccEEEecCCCCccc-------------------------hHHHHHhCC---CCceEEEEeecceeccCCCCCCCCCCC
Q 025908           71 KGFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~~-------------------------~~~l~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (246)
                      ..+|+++|+++.....                         ......+..   +....+.+++......          .
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~----------~  154 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA----------M  154 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC----------C
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc----------C
Confidence            2479999999853110                         001111111   2233444444333111          1


Q ss_pred             CCCCCccccHHHHHHHHH-------hcCCceEEeecceeeCCC-------CCCch----HHHHHHHHHhCCCcccCCCCC
Q 025908          123 VDPKSRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNPV----EEWFFHRLKAGRPIPIPGSGI  184 (246)
Q Consensus       123 ~~~~~~~~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~  184 (246)
                      +....|..+|...+.+.+       ..++++..|.|+.+-.+.       .....    ...+.....+..++.      
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------  228 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG------  228 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC------
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC------
Confidence            111123378988887764       368999999999876531       00000    111112222222221      


Q ss_pred             ceeeeeeHHHHHHHHHHHhcC--CCCCCeeEEeeCCeee
Q 025908          185 QVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYV  221 (246)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (246)
                        +.+..++|+|+++..++.+  ....|+++.+.+|...
T Consensus       229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence              1234479999999999954  3457899999998753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.08  E-value=1.2e-09  Score=80.57  Aligned_cols=142  Identities=18%  Similarity=0.223  Sum_probs=94.8

Q ss_pred             CCccccchHHHHHHHHH---CCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-------
Q 025908            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------   70 (246)
                      |||++-||.++++.|++   +|++|++.+|+.++..+ +     .+......++.++.+|++|+++++++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H-----HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            89999999999999985   68999999999877321 1     11122246899999999998877766542       


Q ss_pred             CCccEEEecCCCCcc---------------------c----hHHHHHhCC-------------CCceEEEEeecceeccC
Q 025908           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (246)
Q Consensus        71 ~~~d~vi~~~~~~~~---------------------~----~~~l~~a~~-------------~~~~~i~~Ss~~v~~~~  112 (246)
                      .++|++||+||....                     +    ++.++..+.             +..++|.+||....-  
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~--  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI--  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS--
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc--
Confidence            369999999986321                     0    111221111             245789998855320  


Q ss_pred             CCCCCCCCCCCCC-CCcc-ccHHHHHHHH-------HhcCCceEEeecceeeCC
Q 025908          113 DLLPHCETDTVDP-KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (246)
Q Consensus       113 ~~~~~~e~~~~~~-~~~~-~~k~~~e~~~-------~~~~~~~~ilR~~~i~g~  157 (246)
                      .       .+..+ ...| .+|.....+.       ...|++++.+.||.+-.+
T Consensus       160 ~-------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 Q-------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             T-------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             C-------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            0       11112 2234 8888877654       346899999999987665

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.9e-10  Score=82.95  Aligned_cols=174  Identities=14%  Similarity=0.095  Sum_probs=110.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCccE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d~   75 (246)
                      ||||+.||+++++.|+++|++|++++|+.++..+...    .........+..+.+|..+.+......+.     ...|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999998766322110    00011235677888999887666555432     26899


Q ss_pred             EEecCCCCcc--------------------c----hHHHHHhCC-CCceEEEEeecceeccCCCCCCCCCCCCCCCCcc-
Q 025908           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (246)
Q Consensus        76 vi~~~~~~~~--------------------~----~~~l~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (246)
                      ++++++....                    +    ++.++..++ +..++|++||...+-.           ......| 
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~-----------~p~~~~Y~  164 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMVAAYS  164 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTCHHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-----------CCCchHHH
Confidence            9999876321                    1    222333333 3468999998775311           1112234 


Q ss_pred             ccHHHHHHHHH---------hcCCceEEeecceeeCCCCCCchHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHHHH
Q 025908          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (246)
Q Consensus       130 ~~k~~~e~~~~---------~~~~~~~ilR~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (246)
                      .+|..++.+.+         ..+++++.+.||.+-.+         +......+.         .....++.+++|+.++
T Consensus       165 asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~e~~a~~i~  226 (269)
T d1xu9a_         165 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGI---------VHMQAAPKEECALEII  226 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGG---------GGGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCC---------ccccCCCHHHHHHHHH
Confidence            88988877542         24688889999877543         222211111         1223456799999998


Q ss_pred             HHhcCCC
Q 025908          201 QVLGNEK  207 (246)
Q Consensus       201 ~~~~~~~  207 (246)
                      ..+....
T Consensus       227 ~~~~~~~  233 (269)
T d1xu9a_         227 KGGALRQ  233 (269)
T ss_dssp             HHHHTTC
T ss_pred             HHhhcCC
Confidence            8775543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=5.5e-10  Score=83.81  Aligned_cols=78  Identities=19%  Similarity=0.200  Sum_probs=60.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhc-----CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-----~~~d   74 (246)
                      |||++-||.++++.|+++ |++|++.+|+.++..+...     ++.....++.++.+|++|.+++++++++     .++|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQ-----QLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHH-----HHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----HHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 8999999998776322111     1112245789999999999888776643     2799


Q ss_pred             EEEecCCCC
Q 025908           75 VVYDINGRE   83 (246)
Q Consensus        75 ~vi~~~~~~   83 (246)
                      ++||+||..
T Consensus        84 iLVnNAGi~   92 (275)
T d1wmaa1          84 VLVNNAGIA   92 (275)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEcCCcC
Confidence            999999974

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.88  E-value=2.2e-08  Score=74.06  Aligned_cols=189  Identities=16%  Similarity=0.139  Sum_probs=99.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhh----hc--CCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA--KGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~----~~--~~~d   74 (246)
                      |||++.||+++++.|.++|++|++++|+..+.                      ..|+.+.+......    .+  ..+|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999876552                      23444443333222    11  2589


Q ss_pred             EEEecCCCCccc-------------hHHHH----HhCC--CCceEEEEeecceecc-CCCCCCC----------------
Q 025908           75 VVYDINGREADE-------------VEPIL----DALP--NLEQFIYCSSAGVYLK-SDLLPHC----------------  118 (246)
Q Consensus        75 ~vi~~~~~~~~~-------------~~~l~----~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~----------------  118 (246)
                      +++++++.....             ...+.    +...  .......+++...... ....+..                
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            999999864321             11111    1111  2334444443222110 0000000                


Q ss_pred             CCCCCCCCCcc-ccHHHHHHHHH-------hcCCceEEeecceeeCCCCCCchHH-HHHHHHHhCCCcccCCCCCceeee
Q 025908          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQL  189 (246)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~ilR~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                      ..........| .+|...+.+.+       ..||++..+.||.+-.|.....+.. .......+.. .+       .--+
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~P-------lgR~  216 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-PP-------MGRR  216 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-CS-------TTSC
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-CC-------CCCC
Confidence            00000111125 88999887764       4689999999998876531111100 0111111110 01       1124


Q ss_pred             eeHHHHHHHHHHHhcC--CCCCCeeEEeeCCe
Q 025908          190 GHVKDLARAFVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       190 i~~~D~a~~~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      ...+|+|+++..++..  ....|+.+.+.||-
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            5689999999999854  34578899998883

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.84  E-value=6.5e-08  Score=74.15  Aligned_cols=29  Identities=17%  Similarity=0.082  Sum_probs=24.8

Q ss_pred             CC--ccccchHHHHHHHHHCCCeEEEEecCC
Q 025908            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (246)
Q Consensus         1 ~G--atG~iG~~l~~~L~~~g~~V~~l~r~~   29 (246)
                      ||  ++.-||.++++.|.++|.+|++..+..
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            57  456899999999999999999887654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.83  E-value=1.7e-07  Score=70.71  Aligned_cols=83  Identities=7%  Similarity=0.003  Sum_probs=55.6

Q ss_pred             ccccHHHHHHHH--------HhcCCceEEeecceeeCCCCCCc-hHHHHHHHHHhCCCcccCCCCCceeeeeeHHHHHHH
Q 025908          128 RHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (246)
Q Consensus       128 ~~~~k~~~e~~~--------~~~~~~~~ilR~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (246)
                      |+.+|...+.+.        .+.|+++..+.||.+..+..... ....+........++   +      .+..++|+|++
T Consensus       192 y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl---g------R~~~peevA~~  262 (297)
T d1d7oa_         192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI---Q------KTLTADEVGNA  262 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS---C------CCBCHHHHHHH
T ss_pred             eecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCC---C------CCCCHHHHHHH
Confidence            447777766554        24689999999999988754332 233344444443333   1      24458999999


Q ss_pred             HHHHhcC--CCCCCeeEEeeCCe
Q 025908          199 FVQVLGN--EKASRQVFNISGEK  219 (246)
Q Consensus       199 ~~~~~~~--~~~~~~~~~~~~~~  219 (246)
                      ++.++..  ....|+++.+.+|.
T Consensus       263 v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         263 AAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhcCCcCceEEECcCH
Confidence            9999954  34578899998884

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.64  E-value=1.9e-09  Score=76.29  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=60.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |||+|.+|+.+++.|.++|.+|+++.|+.++..+....      .....++.+..+|+.+.+++.+++.  ++|+|||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS------VNKRFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH------HHHHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHH------HHhccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            79999999999999999999999999997663221110      0112456778899999999999998  899999999


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus       101 g~g  103 (191)
T d1luaa1         101 AIG  103 (191)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.86  E-value=1e-05  Score=53.05  Aligned_cols=68  Identities=16%  Similarity=0.158  Sum_probs=54.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHh-hhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~d~vi~~~~   81 (246)
                      |.|.+|+.+++.|.+.|++|+++..++.......           ..+...+.+|.++++.+.++ ++  ++|.||-+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            3489999999999999999999999877743322           25677888999999988877 55  7898887665


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            43

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.71  E-value=1.1e-05  Score=52.68  Aligned_cols=69  Identities=19%  Similarity=0.298  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|.+.|++|.++.++++.... +.         ...++.++.+|.++++.+.++-- .+++.++-+...
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~~---------~~~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv~~t~~   75 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKK-AS---------AEIDALVINGDCTKIKTLEDAGI-EDADMYIAVTGK   75 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH---------HHCSSEEEESCTTSHHHHHHTTT-TTCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhh-hh---------hhhhhhhccCcccchhhhhhcCh-hhhhhhcccCCc
Confidence            34999999999999999999999998766321 11         02378899999999999987732 278998876543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00032  Score=43.90  Aligned_cols=63  Identities=13%  Similarity=-0.006  Sum_probs=50.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      |+|.+|+-++....+.|+++++++.+++.....             -.-.++.+|+.|.+.+.++....++|+|-.
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~-------------va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMH-------------VAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-------------GSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh-------------cCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            569999999999999999999999987764322             234667899999999998886557898853

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.24  E-value=0.00025  Score=48.44  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=49.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+|.+|+.+++.|.++||+|+++.|+..+.......         .........+..+.......+.  ..|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---------~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---------ccccccccccccchhhhHhhhh--ccceeEeecc
Confidence            349999999999999999999999998774322111         2345555566667777777776  7788876653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.21  E-value=0.00042  Score=47.58  Aligned_cols=96  Identities=16%  Similarity=0.263  Sum_probs=63.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEE-E-EccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-L-KGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~-~-~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +||+|.+|...++.....|.+|++++|++++.. .+.          ..+... + .-|-...+.+.+.....++|+|++
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~----------~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D  104 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA-YLK----------QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFD  104 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH----------HTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH-HHH----------hhhhhhhcccccccHHHHHHHHhhcCCCceeEE
Confidence            589999999999999999999999998876521 111          122222 2 223333455555555568999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeeccee
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSAGVY  109 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v~  109 (246)
                      +.|.  ......++.++..-+++.+...+.+
T Consensus       105 ~vG~--~~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         105 NVGG--EFLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             SSCH--HHHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             ecCc--hhhhhhhhhccCCCeEEeecceeec
Confidence            9973  3455666666644577766655544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.14  E-value=0.00073  Score=44.83  Aligned_cols=98  Identities=10%  Similarity=0.147  Sum_probs=55.0

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHH-HHHHhhhcC-CccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAK-GFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~-~~d~vi~   78 (246)
                      +||.|.+|+.+++.|.+.||+|.+.+|+..........         ...+.+......... .+.+..... .=.++++
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---------NADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---------TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---------hccccccccchhhheeeeecccccccCCceEEE
Confidence            47799999999999999999999999987663221110         123333333333322 222332211 2347777


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeecceecc
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v~~~  111 (246)
                      +++....-.+.+.+...  .+|  +++...+|+
T Consensus        86 ~~Svk~~~~~~~~~~~~--~~~--v~~hP~~Gp  114 (152)
T d2pv7a2          86 LTSVKREPLAKMLEVHT--GAV--LGLHPMFGA  114 (152)
T ss_dssp             CCSCCHHHHHHHHHHCS--SEE--EEEEECSCT
T ss_pred             ecccCHHHHHHHHHHcc--CCE--EEecccCCC
Confidence            77765444444444432  344  444455544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00037  Score=45.87  Aligned_cols=31  Identities=19%  Similarity=0.357  Sum_probs=23.3

Q ss_pred             CCccccchHHHHHHHHHCC----CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g----~~V~~l~r~~~~   31 (246)
                      +||||++|+.+++.|+++.    .+++.+.++...
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~   41 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG   41 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccc
Confidence            5999999999999888763    256666655433

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.90  E-value=0.00049  Score=46.73  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=55.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|-+|...++.+...|.+|+++++++++... ..          ..+...+ .|..+..  ...-...++|+||++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~~----------~lGa~~~-i~~~~~~--~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PL----------ALGAEEA-ATYAEVP--ERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HH----------HTTCSEE-EEGGGHH--HHHHHTTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhccccccccccccccccccc-cc----------cccccee-eehhhhh--hhhhcccccccccccc
Confidence            5899999999999999999999999988765321 11          1233222 2443322  2222334899999988


Q ss_pred             CCCccchHHHHHhCCCCceEEEEe
Q 025908           81 GREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      |.   .....++.++..-+++.++
T Consensus       100 G~---~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GK---EVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CT---THHHHHTTEEEEEEEEEC-
T ss_pred             ch---hHHHHHHHHhcCCcEEEEe
Confidence            73   3455666666445777654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.74  E-value=0.00021  Score=49.69  Aligned_cols=31  Identities=29%  Similarity=0.418  Sum_probs=28.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +||+|.+|++|++.|.+.||+|.+..|++++
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4888999999999999999999999998766

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.63  E-value=0.00069  Score=46.42  Aligned_cols=91  Identities=16%  Similarity=0.151  Sum_probs=60.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|+++++++++. +.+.+          .+...+ .|..++   +.+.+.....++|++|
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~----------~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSR----------LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHT----------TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeecccccc-ccccc----------cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            58999999999999999999999999876552 22211          232222 233333   4444444445899999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEee
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      ++.+.  ......++.++...++|.++.
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G~  125 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELGK  125 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSC
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEcc
Confidence            99984  345566777774457777653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0017  Score=43.07  Aligned_cols=72  Identities=15%  Similarity=0.204  Sum_probs=53.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|-+|+.+++.|.+.|++|+++..++++......       .....++.++.||.++++.++++-- ..+++|+-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            45889999999999999999999987754211110       0113689999999999998876553 378999877654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.57  E-value=0.00046  Score=45.38  Aligned_cols=29  Identities=24%  Similarity=0.377  Sum_probs=22.5

Q ss_pred             CCccccchHHHHHHHHHCCC---eEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~---~V~~l~r~~   29 (246)
                      +||||++|+.+++.|.+++|   ++..+..+.
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            49999999999999986654   676665443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.50  E-value=0.0015  Score=44.46  Aligned_cols=92  Identities=17%  Similarity=0.129  Sum_probs=58.4

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC-HHHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~d~vi~~   79 (246)
                      .||+|-+|...++.+...|.+|++.++++.+... ..          ..+...+. |..+ .++........++|+|+++
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~-~~----------~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LR----------VLGAKEVL-AREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HH----------HTTCSEEE-ECC---------CCSCCEEEEEEC
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHHH-HH----------hcccceee-ecchhHHHHHHHhhccCcCEEEEc
Confidence            5899999999999999999999999998877421 11          11222211 2222 1233334455689999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEeec
Q 025908           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      .+..  .....++.++...|++.++..
T Consensus       106 vgg~--~~~~~l~~l~~~Griv~~G~~  130 (176)
T d1xa0a2         106 VGGR--TLATVLSRMRYGGAVAVSGLT  130 (176)
T ss_dssp             STTT--THHHHHHTEEEEEEEEECSCC
T ss_pred             CCch--hHHHHHHHhCCCceEEEeecc
Confidence            8753  466777777744577766643

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.0056  Score=43.17  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=45.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-C-HHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-D-YDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~-~~~~~~~~~~~~~d~vi~~~   80 (246)
                      .||.+|.+|++++..+|++|+.++-..+...              ..++..+...-. + .+.+.+.+.  +.|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~--~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQ--QQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGG--GCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhc--cceeEeeee
Confidence            6899999999999999999999987655411              245665554322 1 133344444  899999998


Q ss_pred             CC
Q 025908           81 GR   82 (246)
Q Consensus        81 ~~   82 (246)
                      +.
T Consensus        94 Av   95 (223)
T d1u7za_          94 AV   95 (223)
T ss_dssp             BC
T ss_pred             ch
Confidence            76

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0021  Score=43.61  Aligned_cols=90  Identities=12%  Similarity=0.156  Sum_probs=58.7

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|...++.+...|.+|+++++++.+. +...          ..+...+ .|..+.   +.+.+.....++|+|+
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~----------~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVL----------QNGAHEV-FNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH----------HTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCccccccccccccc-cccc----------ccCcccc-cccccccHHHHhhhhhccCCceEEe
Confidence            48899999999999999999999999876542 1111          1222221 244443   3344444445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++.+.  ......++.++..-+++.++
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLAN--VNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ecccH--HHHHHHHhccCCCCEEEEEe
Confidence            99873  34556667777445777664

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.23  E-value=0.0014  Score=44.68  Aligned_cols=93  Identities=17%  Similarity=0.166  Sum_probs=55.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|..+++.|+++||+|++..|++++..+.......      .....    -....+++.+.+.  .+|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~------~~~~~----~a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAK------GTKVL----GAHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTT------TSSCE----ECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccc------ccccc----chhhhhhhhhhhc--ccceEEEecCc
Confidence            569999999999999999999999988764221110000      00000    1234566666676  78888877544


Q ss_pred             Ccc---chHHHHHhCCCCceEEEEeecc
Q 025908           83 EAD---EVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~---~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      ...   ....++..++..+.+|-.||..
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcch
Confidence            311   1234445555445666666533

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.08  E-value=0.0017  Score=42.53  Aligned_cols=70  Identities=27%  Similarity=0.282  Sum_probs=43.2

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCcccc-CCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|++++-.|..++.  ++..++.++.+... .+..         ......... .....+..+.++  ++|+|+
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~---------~~~~~~~~~-~~~~~~~~~~~~--~aDivV   73 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH---------IETRATVKG-YLGPEQLPDCLK--GCDVVV   73 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT---------SSSSCEEEE-EESGGGHHHHHT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhh---------hhhhcCCCe-EEcCCChHHHhC--CCCEEE
Confidence            58899999999999988873  78888876433110 0110         011111111 122445556676  999999


Q ss_pred             ecCCC
Q 025908           78 DINGR   82 (246)
Q Consensus        78 ~~~~~   82 (246)
                      .++|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            99886

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.01  E-value=0.0072  Score=39.48  Aligned_cols=28  Identities=21%  Similarity=0.427  Sum_probs=21.1

Q ss_pred             CCccccchHHHHHHHHHCC-C---eEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEG-H---QVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~---~V~~l~r~   28 (246)
                      +||||++|+.+++.|+++. |   ++..++.+
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            5999999999999988753 3   55555544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.96  E-value=0.0015  Score=44.66  Aligned_cols=86  Identities=12%  Similarity=-0.001  Sum_probs=49.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|..++..|.++||+|.+++|++.+..........   ....+..+..........++.++++  ++|+||-+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI---IAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE---EEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCC---chhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            459999999999999999999999986552111000000   0000111112111111223456676  8999998764 


Q ss_pred             CccchHHHHHhCC
Q 025908           83 EADEVEPILDALP   95 (246)
Q Consensus        83 ~~~~~~~l~~a~~   95 (246)
                       ......+++.++
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             345566666544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.93  E-value=0.0039  Score=41.61  Aligned_cols=30  Identities=27%  Similarity=0.410  Sum_probs=27.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|+++||+|++..|++++.
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~   36 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAI   36 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchh
Confidence            569999999999999999999999987663

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.93  E-value=0.012  Score=37.40  Aligned_cols=81  Identities=10%  Similarity=0.136  Sum_probs=49.2

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhh---cCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (246)
                      .|++|.+|+.|.+.+.+.++++.+..-....  ..+.            +.. +..|++.|+.+.+.++   +.+.-.|+
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~~~------------~~D-VvIDFS~p~~~~~~l~~~~~~~~p~Vi   70 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EELD------------SPD-VVIDFSSPEALPKTVDLCKKYRAGLVL   70 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EECS------------CCS-EEEECSCGGGHHHHHHHHHHHTCEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HHhc------------cCC-EEEEecCHHHHHHHHHHHHhcCCCEEE
Confidence            4899999999999999999987754322111  1111            111 3457777666554443   24666777


Q ss_pred             ecCCCCccchHHHHHhCCC
Q 025908           78 DINGREADEVEPILDALPN   96 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~   96 (246)
                      -+.|...++...+-++++.
T Consensus        71 GTTG~~~~~~~~i~~~ak~   89 (128)
T d1vm6a3          71 GTTALKEEHLQMLRELSKE   89 (128)
T ss_dssp             CCCSCCHHHHHHHHHHTTT
T ss_pred             EcCCCCHHHHHHHHHHHhh
Confidence            7777665555555555543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.89  E-value=0.0064  Score=40.55  Aligned_cols=93  Identities=11%  Similarity=0.056  Sum_probs=52.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCC--CchhhhhhcCceEEEEccCCCHHHHHHhhhc-------C-C
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-G   72 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-------~-~   72 (246)
                      |.|.+|..+++.|+++||+|++..|++.+........  ......+......++..-+.+.+.....+..       . .
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            5799999999999999999999999866632111100  0000011112233333333444444433321       1 2


Q ss_pred             ccEEEecCCCCccchHHHHHhCC
Q 025908           73 FDVVYDINGREADEVEPILDALP   95 (246)
Q Consensus        73 ~d~vi~~~~~~~~~~~~l~~a~~   95 (246)
                      =+++++++......+..+.+.++
T Consensus        88 g~iiid~st~~p~~~~~~~~~~~  110 (162)
T d3cuma2          88 GTLVLECSTIAPTSARKIHAAAR  110 (162)
T ss_dssp             TCEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            35677777777666666666655

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.78  E-value=0.016  Score=39.35  Aligned_cols=80  Identities=18%  Similarity=0.110  Sum_probs=53.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|..-|.+|++.+|.+....                 .       ...++++++++  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----------------~-------~~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGP-----------------W-------RFTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSS-----------------S-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccc-----------------e-------eeeechhhhhh--ccchhhccccc
Confidence            5689999999999999999999988764411                 0       01124567777  89999876654


Q ss_pred             Cccc----hHHHHHhCCCCceEEEEeecce
Q 025908           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +...    ....++.++....||.+|-..+
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~i  132 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  132 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ccccccccccceeeeccccceEEecccccc
Confidence            3221    2345555665567777775444

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.0072  Score=40.27  Aligned_cols=30  Identities=30%  Similarity=0.434  Sum_probs=27.2

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |+ |.+|+.++..|.+.|++|.++.|++...
T Consensus         7 Ga-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             Cc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            44 9999999999999999999999988764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.0071  Score=40.94  Aligned_cols=90  Identities=17%  Similarity=0.149  Sum_probs=58.1

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH---HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~~~~~~d~vi   77 (246)
                      +||+|.+|..+++.+...|.+|+++++++.+... +.          ..+...+ .|..++   +.+.++-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~----------~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-AL----------KAGAWQV-INYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH----------HHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHHHH-HH----------hcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEE
Confidence            5899999999999999999999999999877321 11          1222222 244443   3444444445799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++.+.  ......++.++..-+++..+
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2         103 DSVGR--DTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             ECSCG--GGHHHHHHTEEEEEEEEECC
T ss_pred             eCccH--HHHHHHHHHHhcCCeeeecc
Confidence            99874  34555666665333565544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.30  E-value=0.0024  Score=37.93  Aligned_cols=66  Identities=15%  Similarity=0.073  Sum_probs=43.9

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|+.|  |++.|.++|++|.+-++......+.|.          ..++.+..+.  +++.    ++  ++|.||...
T Consensus         9 IgG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~gh--~~~~----i~--~~d~vV~Ss   68 (89)
T d1j6ua1           9 IGGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVPH--SADN----WY--DPDLVIKTP   68 (89)
T ss_dssp             TTSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESSC--CTTS----CC--CCSEEEECT
T ss_pred             ECHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEeee--cccc----cC--CCCEEEEec
Confidence            36666665  788899999999999987655333332          3577766542  2222    23  789999888


Q ss_pred             CCCccc
Q 025908           81 GREADE   86 (246)
Q Consensus        81 ~~~~~~   86 (246)
                      +...+.
T Consensus        69 AI~~~n   74 (89)
T d1j6ua1          69 AVRDDN   74 (89)
T ss_dssp             TCCTTC
T ss_pred             CcCCCC
Confidence            876444

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.03  E-value=0.017  Score=34.61  Aligned_cols=66  Identities=20%  Similarity=0.302  Sum_probs=44.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|+  ++|++.|.++|++|.+-++..+...+.+.          ..++.+..++-.  +    .+.  ++|.||...
T Consensus        16 igG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~~--~----~i~--~~d~vV~S~   75 (96)
T d1p3da1          16 IGGAGM--SGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHAE--E----HIE--GASVVVVSS   75 (96)
T ss_dssp             TTSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCCG--G----GGT--TCSEEEECT
T ss_pred             ECHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCcc--c----cCC--CCCEEEECC
Confidence            356665  55799999999999999987655322222          367777665532  2    233  789999888


Q ss_pred             CCCccc
Q 025908           81 GREADE   86 (246)
Q Consensus        81 ~~~~~~   86 (246)
                      +...+.
T Consensus        76 AI~~~n   81 (96)
T d1p3da1          76 AIKDDN   81 (96)
T ss_dssp             TSCTTC
T ss_pred             CcCCCC
Confidence            876444

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.03  E-value=0.01  Score=33.94  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.3

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      +||+|-+|...++.+...|.+|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5899999999999988999999999998766

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.00  E-value=0.0074  Score=41.28  Aligned_cols=96  Identities=14%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             CCccccchHHHHHHHHHCCCe-EEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~   78 (246)
                      +||+|-+|...++.+...|.+ |++.+++.++......        . ..-..++...-.+. +.+.++- ..++|+|++
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~--------~-~gad~vi~~~~~~~~~~~~~~~-~~GvDvv~D  106 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS--------E-LGFDAAVNYKTGNVAEQLREAC-PGGVDVYFD  106 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH--------H-SCCSEEEETTSSCHHHHHHHHC-TTCEEEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh--------c-ccceEEeeccchhHHHHHHHHh-ccCceEEEe
Confidence            589999999999999889965 5545554433211100        0 11222333222233 3333333 358999999


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeecce
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +.|.  ......++.++..-+++.+...+-
T Consensus       107 ~vGg--~~~~~~~~~l~~~G~iv~~G~~s~  134 (187)
T d1vj1a2         107 NVGG--DISNTVISQMNENSHIILCGQISQ  134 (187)
T ss_dssp             SSCH--HHHHHHHTTEEEEEEEEEC-----
T ss_pred             cCCc--hhHHHHhhhccccccEEEeccccc
Confidence            9973  334455555554457777665443

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.99  E-value=0.0032  Score=41.61  Aligned_cols=29  Identities=24%  Similarity=0.315  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|+.+++.|+++|++|.+..|.+.+
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            57999999999999999999988877655

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.97  E-value=0.0023  Score=42.43  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=18.0

Q ss_pred             CCccccchHHHHHHHHHCCC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH   20 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~   20 (246)
                      +||||++|..|++.|.++++
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            59999999999999988864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=94.67  E-value=0.0021  Score=42.87  Aligned_cols=64  Identities=19%  Similarity=0.150  Sum_probs=44.1

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+ |-+|+.+++.|...|. ++.+..|...+......          .-+...     .+.+++.+.+.  .+|+||.+.
T Consensus        31 Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~----------~~~~~~-----~~~~~~~~~l~--~~Divi~at   92 (159)
T d1gpja2          31 GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----------DLGGEA-----VRFDELVDHLA--RSDVVVSAT   92 (159)
T ss_dssp             SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----------HHTCEE-----CCGGGHHHHHH--TCSEEEECC
T ss_pred             CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH----------hhhccc-----ccchhHHHHhc--cCCEEEEec
Confidence            55 9999999999999996 68888887665321111          112222     23456777787  999999998


Q ss_pred             CCC
Q 025908           81 GRE   83 (246)
Q Consensus        81 ~~~   83 (246)
                      +..
T Consensus        93 ss~   95 (159)
T d1gpja2          93 AAP   95 (159)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.55  E-value=0.0048  Score=41.44  Aligned_cols=88  Identities=14%  Similarity=0.082  Sum_probs=52.3

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCC-CHHHHHHhhhcCCccEEEecC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+ |.+|...++.+...|.+|+++++++.+....         .  ..+...+. |.. +.+..+....  ++|.++.+.
T Consensus        35 Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a---------~--~lGa~~~i-~~~~~~~~~~~~~~--~~d~vi~~~   99 (168)
T d1piwa2          35 GL-GGIGSMGTLISKAMGAETYVISRSSRKREDA---------M--KMGADHYI-ATLEEGDWGEKYFD--TFDLIVVCA   99 (168)
T ss_dssp             CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH---------H--HHTCSEEE-EGGGTSCHHHHSCS--CEEEEEECC
T ss_pred             CC-CCcchhHHHHhhhccccccccccchhHHHHh---------h--ccCCcEEe-eccchHHHHHhhhc--ccceEEEEe
Confidence            54 8999999988888899999999987763211         1  12222221 222 2233333333  799999987


Q ss_pred             CCCccc-hHHHHHhCCCCceEEEEe
Q 025908           81 GREADE-VEPILDALPNLEQFIYCS  104 (246)
Q Consensus        81 ~~~~~~-~~~l~~a~~~~~~~i~~S  104 (246)
                      +..... ....++.++..-+++.++
T Consensus       100 ~~~~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         100 SSLTDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             SCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred             cCCccchHHHHHHHhhccceEEEec
Confidence            754332 334455555334666654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.49  E-value=0.0054  Score=40.45  Aligned_cols=78  Identities=12%  Similarity=0.043  Sum_probs=49.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |+|.+|+++++.|.+.|+++++..|+.++......          ..++...    .+   .+++++  +.|+|+-+.- 
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~----------~~g~~~~----~~---~~~~~~--~~dvIilavk-   66 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE----------QLALPYA----MS---HQDLID--QVDLVILGIK-   66 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH----------HHTCCBC----SS---HHHHHH--TCSEEEECSC-
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc----------ccceeee----ch---hhhhhh--ccceeeeecc-
Confidence            67999999999999999999999888665321100          0122211    23   344555  8999987763 


Q ss_pred             CccchHHHHHhCCCCceEE
Q 025908           83 EADEVEPILDALPNLEQFI  101 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i  101 (246)
                       ......+++.+...+.+|
T Consensus        67 -p~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          67 -PQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             -GGGHHHHHTTSCCCSCEE
T ss_pred             -hHhHHHHhhhcccceeEe
Confidence             355666766655433333

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.49  E-value=0.031  Score=38.35  Aligned_cols=82  Identities=13%  Similarity=0.077  Sum_probs=49.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.||+.+++.|..-|.+|++.++.......             ...        ...+++.++++  .+|+|+.+...
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-------------~~~--------~~~~~l~~~l~--~sDii~~~~pl  106 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELE-------------KKG--------YYVDSLDDLYK--QADVISLHVPD  106 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT--------CBCSCHHHHHH--HCSEEEECSCC
T ss_pred             cccccchhHHHhHhhhcccccccCcccccccc-------------cce--------eeecccccccc--ccccccccCCc
Confidence            56999999999999999999998776543110             011        11234566676  77877766544


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecc
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      +..    -....++.+++...||.+|=..
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sRG~  135 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSRGP  135 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             cccccccccHHHHhhhCCccEEEecCchh
Confidence            321    1234455566445666665433

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.46  E-value=0.05  Score=36.17  Aligned_cols=91  Identities=13%  Similarity=0.099  Sum_probs=56.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccC--CCHHHHHHhhh---cCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR--KDYDFVKSSLS---AKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~~~~~~~---~~~~d~vi   77 (246)
                      |+|.+|...++.+...|.+|+++++++.+.....         ++.... .+..|-  .+..++.+.++   ..++|+||
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~---------~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK---------NCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHHHHH---------HcCCcE-EEeccccccccchhhhhhhcccccCCceee
Confidence            4688999999999889999999999877632110         001112 222232  23444444443   24799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ++++.. ......++.++..-+++.++
T Consensus       104 d~~g~~-~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         104 DCSGNE-KCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             ECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             ecCCCh-HHHHHHHHHHhcCCceEEEe
Confidence            998753 23455667777555777665

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.043  Score=37.10  Aligned_cols=76  Identities=16%  Similarity=0.113  Sum_probs=51.9

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |+|..|++++..|.+.|. ++++..|++++..+....  ..+.. ..-.......++.+.+.+.+.+.  .+|+||++..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAF--AQRVN-ENTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHH--HHHHH-HHSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHH--HHHHH-hhcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            558889999999999985 788888887653211100  00000 11234456778888888888887  9999999986


Q ss_pred             CC
Q 025908           82 RE   83 (246)
Q Consensus        82 ~~   83 (246)
                      ..
T Consensus       100 ~G  101 (182)
T d1vi2a1         100 VG  101 (182)
T ss_dssp             TT
T ss_pred             Cc
Confidence            54

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.34  E-value=0.037  Score=37.38  Aligned_cols=84  Identities=17%  Similarity=0.149  Sum_probs=50.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc-ccCCCC-CCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |+|..|.+++..|.+.|++|++..|..++. ...+.. ....     ..+......++.-.+++.++++  ++|.|+.+.
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av   79 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHP-----RLGVKLNGVEIFWPEQLEKCLE--NAEVVLLGV   79 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBT-----TTTBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhh-----hhcchhccccccccccHHHHHh--ccchhhccc
Confidence            569999999999999999999999854431 000000 0000     0011111112223456777887  899998766


Q ss_pred             CCCccchHHHHHhCC
Q 025908           81 GREADEVEPILDALP   95 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~   95 (246)
                      .  ....+.+++.+.
T Consensus        80 p--s~~~~~~~~~l~   92 (180)
T d1txga2          80 S--TDGVLPVMSRIL   92 (180)
T ss_dssp             C--GGGHHHHHHHHT
T ss_pred             c--hhhhHHHHHhhc
Confidence            4  456667776644

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.07  Score=35.49  Aligned_cols=90  Identities=12%  Similarity=0.098  Sum_probs=57.3

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCCHHHHHHhhh---cCCccEEE
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLS---AKGFDVVY   77 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~~~~~~~---~~~~d~vi   77 (246)
                      |.|.+|...+..+...|. +|+++.+++.+.... .          .-+.. ++..+-.+..+..+.++   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~----------~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-K----------EIGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H----------HTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHHHH-H----------HhCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999999997 799998887663211 0          12332 23333345544444442   24799999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .++|.. ......++.++...++++++
T Consensus       103 d~~G~~-~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGAE-ASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             eccCCc-hhHHHHHHHhcCCCEEEEEe
Confidence            999853 23445667777555777666

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.77  E-value=0.02  Score=36.37  Aligned_cols=65  Identities=15%  Similarity=0.074  Sum_probs=47.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |-|-+|+.+++.|  ++++|.++..++......           ...++.++.||.++++.|.++-- .+++.++-+..
T Consensus         7 G~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~-----------~~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~   71 (129)
T d2fy8a1           7 GWSESTLECLREL--RGSEVFVLAEDENVRKKV-----------LRSGANFVHGDPTRVSDLEKANV-RGARAVIVNLE   71 (129)
T ss_dssp             SCCHHHHHHHHTS--CGGGEEEEESCTTHHHHH-----------HHTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCS
T ss_pred             CCCHHHHHHHHHH--cCCCCEEEEcchHHHHHH-----------HhcCccccccccCCHHHHHHhhh-hcCcEEEEecc
Confidence            3478999999998  466788888776653211           13689999999999988876532 37888887664

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.71  E-value=0.06  Score=33.64  Aligned_cols=29  Identities=24%  Similarity=0.268  Sum_probs=26.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+..
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            67999999999999999999999988755

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=93.40  E-value=0.027  Score=37.36  Aligned_cols=29  Identities=28%  Similarity=0.405  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|..+++.|.+.|++|++.+|++..
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999988654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.17  E-value=0.035  Score=37.34  Aligned_cols=89  Identities=18%  Similarity=0.189  Sum_probs=47.3

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCc-eEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +||||++|+.+++.|.++. .++..+..+... -+.+.        ...+. ..-......+.+.   +.+  ++|+|+.
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~a-G~~i~--------~~~p~~~~~~~~~~~~~~~---~~~--~~dvvf~   72 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLE--------EIFPSTLENSILSEFDPEK---VSK--NCDVLFT   72 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHH--------HHCGGGCCCCBCBCCCHHH---HHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeeccccC-CCccc--------ccCchhhccccccccCHhH---hcc--ccceEEE
Confidence            5999999999999999886 466666543322 11110        00000 0000111123333   333  7899998


Q ss_pred             cCCCCccchHHHHHhCCCCceEEEEeec
Q 025908           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (246)
                      +.....  ...++... ...++|-+|+.
T Consensus        73 a~p~~~--s~~~~~~~-~~~~VIDlSad   97 (176)
T d1vkna1          73 ALPAGA--SYDLVREL-KGVKIIDLGAD   97 (176)
T ss_dssp             CCSTTH--HHHHHTTC-CSCEEEESSST
T ss_pred             ccccHH--HHHHHHhh-ccceEEecCcc
Confidence            876543  23344333 33467766653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.17  E-value=0.046  Score=36.86  Aligned_cols=90  Identities=12%  Similarity=0.138  Sum_probs=54.8

Q ss_pred             CccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCCHHH----HHHhhhcCCccE
Q 025908            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDF----VKSSLSAKGFDV   75 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~----~~~~~~~~~~d~   75 (246)
                      |+ |-+|...++.+...|. +|+++++++.+... ..          .-+. .++...-.+..+    +.+.....++|+
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~-a~----------~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL-AE----------EIGADLTLNRRETSVEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH-HH----------HTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CC-Cccchhheecccccccccccccccccccccc-cc----------cccceEEEeccccchHHHHHHHHHhhCCCCceE
Confidence            55 8899999999999996 79999998776311 11          1222 222222223222    333333457999


Q ss_pred             EEecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           76 VYDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ||.++|.. ......++.++..-+++.++
T Consensus       104 vid~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         104 ILEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EEECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             EeecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            99998763 33455667776445666655

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=93.12  E-value=0.089  Score=35.63  Aligned_cols=96  Identities=14%  Similarity=0.170  Sum_probs=56.8

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEcc---CCC-HHHHHHhhh--cCCcc
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD---RKD-YDFVKSSLS--AKGFD   74 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D---~~~-~~~~~~~~~--~~~~d   74 (246)
                      .||+|-+|...++.....|.+|++++|+.++..+...     ...++ .-..++.-|   ..+ .+.+.+...  ..++|
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~-----~~~~l-Gad~vi~~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVA-----SLKEL-GATQVITEDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHH-----HHHHH-TCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHh-----hhhhc-cccEEEeccccchhHHHHHHHHHHhhccCCce
Confidence            4889999999999998899999999988765321100     00011 112222222   111 122333322  23699


Q ss_pred             EEEecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        75 ~vi~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +++++.+.  ......++.++...+++.++
T Consensus       110 vv~D~vg~--~~~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2         110 LALNCVGG--KSSTGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             EEEESSCH--HHHHHHHHTSCTTCEEEECC
T ss_pred             EEEECCCc--chhhhhhhhhcCCcEEEEEC
Confidence            99998863  34566777777555777554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.08  E-value=0.036  Score=37.89  Aligned_cols=84  Identities=11%  Similarity=0.046  Sum_probs=49.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.||+.+++.|..-|.+|.+.++........            ..++       ...+++.++++  .+|+|+.+...
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~------------~~~~-------~~~~~l~~ll~--~sD~i~~~~pl  114 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVER------------ALGL-------QRVSTLQDLLF--HSDCVTLHCGL  114 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH------------HHTC-------EECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccccccccceeeeeccccceeeccCcccccchh------------hhcc-------ccccchhhccc--cCCEEEEeecc
Confidence            568999999999999999999998865441100            0011       11234555666  67777655443


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecc
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (246)
                      +..    -....++.++...-||.+|-..
T Consensus       115 t~~T~~li~~~~l~~mk~~a~lIN~sRG~  143 (193)
T d1mx3a1         115 NEHNHHLINDFTVKQMRQGAFLVNTARGG  143 (193)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred             cccchhhhhHHHHhccCCCCeEEecCCce
Confidence            321    1233455555445666655433

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.89  E-value=0.15  Score=34.90  Aligned_cols=89  Identities=11%  Similarity=0.058  Sum_probs=49.9

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEc-cCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      ++..|..+++.|++.|++|.++...+++...... ...........++.++.. ++.++ ++.+.++..++|.++.+...
T Consensus         8 ~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~-~~~~~~~a~~~~i~~~~~~~~~~~-~~~~~i~~~~~Dlii~~g~~   85 (203)
T d2blna2           8 YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAF-YGSVARLAAERGIPVYAPDNVNHP-LWVERIAQLSPDVIFSFYYR   85 (203)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCCC------C-CCCHHHHHHHHTCCEECCSCCCSH-HHHHHHHHTCCSEEEEESCC
T ss_pred             cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccc-cCHHHHHHHHcCCcceecccccch-hhhhhhhhhcccceeeeecc
Confidence            4557999999999999999876654443211111 011111112346666654 45554 44556666799999877654


Q ss_pred             CccchHHHHHhCC
Q 025908           83 EADEVEPILDALP   95 (246)
Q Consensus        83 ~~~~~~~l~~a~~   95 (246)
                      .. --..+++..+
T Consensus        86 ~i-i~~~il~~~~   97 (203)
T d2blna2          86 HL-IYDEILQLAP   97 (203)
T ss_dssp             SC-CCHHHHTTCT
T ss_pred             cc-hhcccchhhH
Confidence            32 2245666554

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.71  E-value=0.029  Score=38.02  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=22.4

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r   27 (246)
                      +||||++|+.+++.|.++. .++..+..
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            5999999999999999986 46666653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.67  E-value=0.08  Score=35.39  Aligned_cols=89  Identities=11%  Similarity=-0.014  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCC-HHHHHHhhhcCCccEEEecC
Q 025908            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~-~~~~~~~~~~~~~d~vi~~~   80 (246)
                      .|-+|...++.+...|. +|+++++++.+.... .          ..+. .++..+-.+ .+.+.+.....++|+||.++
T Consensus        36 aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~----------~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~  104 (174)
T d1jqba2          36 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-K----------FYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAG  104 (174)
T ss_dssp             CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-H----------HHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCcchhhhhhhhhcccccccccccchhhhHHHH-H----------hhCccccccccchhHHHHHHHHhhccCcceEEEcc
Confidence            48999999998888885 799988876652111 0          1222 222221122 34455555545799999999


Q ss_pred             CCCccchHHHHHhCCCCceEEEEe
Q 025908           81 GREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      +.. ......++.++...+++.++
T Consensus       105 g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         105 GGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             SCT-THHHHHHHHEEEEEEEEECC
T ss_pred             CCH-HHHHHHHHHHhcCCEEEEEe
Confidence            864 23345566666445666655

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.54  E-value=0.099  Score=32.66  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+..
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            57999999999999999999999887654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.46  E-value=0.022  Score=38.38  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCcc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (246)
                      |.|.+|..+++.|+++||+|++.+|++++.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987663

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.36  E-value=0.41  Score=32.18  Aligned_cols=29  Identities=24%  Similarity=0.219  Sum_probs=25.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|+.+++.|..-|.+|++.++....
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKL   79 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred             ecccchhhhhhhcccccceEeeccccccc
Confidence            67999999999999999999999886544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.34  E-value=0.36  Score=32.88  Aligned_cols=29  Identities=24%  Similarity=0.271  Sum_probs=25.6

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.||+.+++.|..-|.+|++.++....
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   80 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMK   80 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             ecccccccccccccccceeeeccCCccch
Confidence            67999999999999999999999886554

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.26  E-value=0.033  Score=37.61  Aligned_cols=27  Identities=19%  Similarity=0.320  Sum_probs=22.4

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r   27 (246)
                      +||||++|+.|++.|.++. .++..+..
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~~   34 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALTV   34 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence            4999999999999999985 57766543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.13  E-value=0.36  Score=31.64  Aligned_cols=28  Identities=21%  Similarity=0.166  Sum_probs=21.4

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEE-ecC
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l-~r~   28 (246)
                      .|++|.+|+.|++.+.+. +.++.+. .|.
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~   39 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALERE   39 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence            589999999999999886 4565544 443

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.08  E-value=0.077  Score=33.17  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+.-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            56999999999999999999999987655

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=91.97  E-value=0.048  Score=36.23  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=55.6

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      | .|-+|...++.+...|.+++++++++.+.. ...          ..+... ..|..+.+......+  ++|++|.+.+
T Consensus        38 G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~----------~lGad~-~i~~~~~~~~~~~~~--~~D~vid~~g  102 (168)
T d1uufa2          38 G-IGGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAK----------ALGADE-VVNSRNADEMAAHLK--SFDFILNTVA  102 (168)
T ss_dssp             C-CSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH----------HHTCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             c-cchHHHHHHHHhhcccccchhhccchhHHH-HHh----------ccCCcE-EEECchhhHHHHhcC--CCceeeeeee
Confidence            5 488999999998889999999988776631 111          122222 135566665555554  8999999987


Q ss_pred             CCccchHHHHHhCCCCceEEEEe
Q 025908           82 READEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .. ......++.++..-+++.++
T Consensus       103 ~~-~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         103 AP-HNLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECC
T ss_pred             cc-hhHHHHHHHHhcCCEEEEec
Confidence            53 23444556555434666554

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.83  E-value=0.37  Score=30.50  Aligned_cols=26  Identities=12%  Similarity=0.197  Sum_probs=20.5

Q ss_pred             CCccccchHHHHHHHHHC-CCeEEEEe
Q 025908            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~-g~~V~~l~   26 (246)
                      .|++|.+|+.+++.+.+. ++++.+..
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            489999999999988776 46766543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.69  E-value=0.12  Score=34.20  Aligned_cols=92  Identities=13%  Similarity=0.201  Sum_probs=52.4

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCce-EEEEccCCCH-HHHHHhhhcCCccEEE
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDY-DFVKSSLSAKGFDVVY   77 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~-~~~~~~~~~~~~d~vi   77 (246)
                      +|++|-+|...+..+...| .+|++..+++.+... ..          ..+. .++..+-.|. +.+.+.....++|++|
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~-~~----------~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vi  102 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-AK----------RAGADYVINASMQDPLAEIRRITESKGVDAVI  102 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-HH----------HHTCSEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhHHH-HH----------HcCCceeeccCCcCHHHHHHHHhhcccchhhh
Confidence            4788999999999998888 488888887655211 11          1222 2333332232 3333333334699999


Q ss_pred             ecCCCCccchHHHHHhCCCCceEEEEe
Q 025908           78 DINGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .+++.. ......++.++...+++.++
T Consensus       103 d~~g~~-~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         103 DLNNSE-KTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             ESCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             cccccc-hHHHhhhhhcccCCEEEEec
Confidence            998642 11222344444334666554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=91.66  E-value=0.032  Score=36.10  Aligned_cols=28  Identities=11%  Similarity=0.125  Sum_probs=23.3

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRG   28 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~   28 (246)
                      +||+|.+|..++..|..++.  ++..++..
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            58899999999999999874  67777653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.55  E-value=0.15  Score=33.10  Aligned_cols=55  Identities=20%  Similarity=0.182  Sum_probs=39.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~   78 (246)
                      +.||+|..++..|.+.|.+|+++.+.+.....                     .|-.....+.+.+.+.+++...+
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~---------------------~~~~~~~~~~~~l~~~GV~i~~~  102 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANYM---------------------HFTLEYPNMMRRLHELHVEELGD  102 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH---------------------HHTTCHHHHHHHHHHTTCEEEET
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCccccc---------------------cchhHHHHHHHHHhhccceEEec
Confidence            56999999999999999999999987543111                     13334566666676667777654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.54  E-value=0.026  Score=36.68  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=25.6

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCC
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~   30 (246)
                      +||+|.+|..++..|..++  .++..++++++
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            5889999999999999888  48888888653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=91.45  E-value=0.42  Score=27.90  Aligned_cols=65  Identities=11%  Similarity=0.126  Sum_probs=42.7

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      -|-.|.++++.|.+.|.+|++.+.+.........          ...+.+..+.. +.+    .+.  ++|.||-.-|..
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----------~~~~~~~~~~~-~~~----~~~--~~d~vi~SPGi~   75 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----------PEAVERHTGSL-NDE----WLM--AADLIVASPGIA   75 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----------CTTSCEEESBC-CHH----HHH--HCSEEEECTTSC
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----------hhccceeeccc-chh----hhc--cCCEEEECCCCC
Confidence            3778999999999999999999987665321111          23444444443 222    233  789999887765


Q ss_pred             cc
Q 025908           84 AD   85 (246)
Q Consensus        84 ~~   85 (246)
                      ..
T Consensus        76 ~~   77 (93)
T d2jfga1          76 LA   77 (93)
T ss_dssp             TT
T ss_pred             CC
Confidence            44

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.28  E-value=0.049  Score=37.15  Aligned_cols=86  Identities=15%  Similarity=0.084  Sum_probs=51.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.||+.+++.+..-|.+|.+.++.........           ..       .....+++.++++  .+|+|+.+...
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-----------~~-------~~~~~~~l~~ll~--~sD~v~l~~pl  113 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-----------SY-------QATFHDSLDSLLS--VSQFFSLNAPS  113 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-----------HH-------TCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccccchhh-----------cc-------cccccCCHHHHHh--hCCeEEecCCC
Confidence            5689999999999999999999887655421000           00       0011234666776  77888755544


Q ss_pred             Ccc----chHHHHHhCCCCceEEEEeecce
Q 025908           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (246)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~v  108 (246)
                      +..    -....++.|+....||.+|=..+
T Consensus       114 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i  143 (191)
T d1gdha1         114 TPETRYFFNKATIKSLPQGAIVVNTARGDL  143 (191)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             CchHhheecHHHhhCcCCccEEEecCCccc
Confidence            321    12345555665556666664443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.15  E-value=0.055  Score=36.78  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=25.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.||+.+++.|..-|.+|...+|...+
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cccccchhhhhhhhccCceEEEEeecccc
Confidence            57899999999999999999999987544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.07  E-value=0.099  Score=33.20  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|++|..++..|.+.|.+|+++.+.+..
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            56999999999999999999999988655

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.01  E-value=0.068  Score=36.15  Aligned_cols=29  Identities=21%  Similarity=0.306  Sum_probs=25.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|+.+++.+..-|.+|.+.++...+
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCCh
Confidence            67899999999999889999998876554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=90.86  E-value=0.035  Score=36.10  Aligned_cols=30  Identities=13%  Similarity=0.246  Sum_probs=25.2

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (246)
                      +| +|++|..++..|..+|  .++..+++++.+
T Consensus        11 IG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~   42 (146)
T d1ez4a1          11 VG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDR   42 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-CCHHHHHHHHHHHhcCCCcEEEEeecccch
Confidence            36 5999999999999987  589999987654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=90.58  E-value=0.097  Score=35.11  Aligned_cols=90  Identities=18%  Similarity=0.156  Sum_probs=56.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      +||+|-+|...++.+...|.+|++++|++.+.. .+.          ..+...+ .|..+. ...+.+.+...|.++++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~-~~~----------~lGad~v-i~~~~~-~~~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHE-YLK----------SLGASRV-LPRDEF-AESRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHH----------HHTEEEE-EEGGGS-SSCCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHH-HHH----------hhccccc-cccccH-HHHHHHHhhcCCeeEEEc
Confidence            589999999999999999999999999887732 111          1233322 122222 122344444679999887


Q ss_pred             CCCccchHHHHHhCCCCceEEEEee
Q 025908           81 GREADEVEPILDALPNLEQFIYCSS  105 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (246)
                      +..  .....++.++..-+++.++.
T Consensus       105 gg~--~~~~~l~~l~~~Griv~~G~  127 (177)
T d1o89a2         105 GDK--VLAKVLAQMNYGGCVAACGL  127 (177)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             chH--HHHHHHHHhccccceEeecc
Confidence            642  34455565554447776653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.53  E-value=0.092  Score=35.73  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|+.++..++..|++|+++++++..
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            45999999999999999999999998754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.30  E-value=0.059  Score=35.53  Aligned_cols=72  Identities=10%  Similarity=-0.031  Sum_probs=50.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|+.+++.|...|.+|.+..+.+.+..+..           ..++++.        .+++++.  ..|+++.+.|.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-----------~dG~~v~--------~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQAA-----------MEGYEVT--------TMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHHhh-----------cCceEee--------ehhhhhh--hccEEEecCCC
Confidence            6799999999999999999999988775532211           2344432        3455665  88999988886


Q ss_pred             CccchHHHHHhCC
Q 025908           83 EADEVEPILDALP   95 (246)
Q Consensus        83 ~~~~~~~l~~a~~   95 (246)
                      ...-...-++.++
T Consensus        90 ~~vI~~eh~~~MK  102 (163)
T d1li4a1          90 IDIILGRHFEQMK  102 (163)
T ss_dssp             SCSBCHHHHTTCC
T ss_pred             ccchhHHHHHhcc
Confidence            4444455566666

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=90.23  E-value=0.049  Score=36.55  Aligned_cols=18  Identities=22%  Similarity=0.169  Sum_probs=16.2

Q ss_pred             CCccccchHHHHHHHHHC
Q 025908            1 MGGTRFIGVFLSRLLVKE   18 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~   18 (246)
                      +||+|.+|.+++-.|.+.
T Consensus        30 ~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHT
T ss_pred             ECCCcHHHHHHHHHHHcC
Confidence            699999999999998874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.08  E-value=0.049  Score=35.55  Aligned_cols=29  Identities=24%  Similarity=0.351  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (246)
                      |.|.+|+++++.|++.| ++|++..|++++
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            56999999999999887 899999998766

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.98  E-value=0.2  Score=30.60  Aligned_cols=85  Identities=14%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|.+|..-++.|++.|.+|++++....+....+..         ..++++....+.+.     .++  +++.|+.+.+.
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~-----dl~--~~~lv~~at~d   82 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---------EGMLTLVEGPFDET-----LLD--SCWLAIAATDD   82 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---------TTSCEEEESSCCGG-----GGT--TCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---------cCCceeeccCCCHH-----HhC--CCcEEeecCCC
Confidence            569999999999999999999998766553221111         35677777666542     244  77888765433


Q ss_pred             CccchHHHHHhCCCCceEEEEe
Q 025908           83 EADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      . .-...+.+.|+....+|.+.
T Consensus        83 ~-~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          83 D-TVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             H-HHHHHHHHHHHHTTCEEEET
T ss_pred             H-HHHHHHHHHHHHcCCEEEeC
Confidence            2 22334555565444556543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.62  E-value=0.15  Score=34.87  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|++|++++.++.+
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            67999999999999999999999987654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.56  E-value=0.17  Score=31.10  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            56999999999999999999999987654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=89.40  E-value=0.12  Score=34.34  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=53.5

Q ss_pred             CCccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEec
Q 025908            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (246)
                      +||+|-+|...++.....|.+|+++++++++... +.        +  .+...+ .|..+. .+........++|+|+++
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-~~--------~--lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY-LK--------Q--LGASEV-ISREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH-HH--------H--HTCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH-HH--------h--hcccce-EeccchhchhhhcccCCCceEEEec
Confidence            4899999999999998999999999998877321 11        1  122222 121110 001111222479999998


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEe
Q 025908           80 NGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .+.  ......++.++..-+++.+.
T Consensus        98 vgg--~~~~~~~~~l~~~G~iv~~G  120 (167)
T d1tt7a2          98 VGG--KQLASLLSKIQYGGSVAVSG  120 (167)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECC
T ss_pred             CcH--HHHHHHHHHhccCceEEEee
Confidence            764  23445556555444666554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.15  E-value=1  Score=27.71  Aligned_cols=65  Identities=12%  Similarity=0.032  Sum_probs=46.1

Q ss_pred             cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      +.+.+.++.|.+.|++++.+..++........            -..-+...-...+.+.+.++.+++|.|+-..|.
T Consensus        25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------------~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~GG   89 (121)
T d1a9xa4          25 YCCVHASLALREDGYETIMVNCNPETVSTDYD------------TSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------------SSSEEECCCCSHHHHHHHHHHHCCSEEECSSST
T ss_pred             HHHHHHHHHHHhcCCeEEEEecChhhhhcChh------------hcCceEEccCCHHHHHHHHHHhCCCEEEeehhh
Confidence            56778999999999999999888877543221            112233333457888888888899999866543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.10  E-value=0.13  Score=34.19  Aligned_cols=90  Identities=12%  Similarity=0.128  Sum_probs=49.3

Q ss_pred             CccccchHHHHHHHHHCCCeE-EEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCH-HHHHHhhhcCCccEEEec
Q 025908            2 GGTRFIGVFLSRLLVKEGHQV-TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V-~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~d~vi~~   79 (246)
                      |+ |.+|...+..+...|.++ ++.++++.+.. ...        ++ .-.+++..+-.+. +.+.++. ..++|+||.+
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~-~a~--------~~-Ga~~~i~~~~~~~~~~i~~~t-~gg~D~vid~  103 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESRLE-LAK--------QL-GATHVINSKTQDPVAAIKEIT-DGGVNFALES  103 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHH--------HH-TCSEEEETTTSCHHHHHHHHT-TSCEEEEEEC
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHHHH-HHH--------Hc-CCeEEEeCCCcCHHHHHHHHc-CCCCcEEEEc
Confidence            54 899999999888888754 55555554421 111        11 1223343332232 3333332 2479999999


Q ss_pred             CCCCccchHHHHHhCCCCceEEEEe
Q 025908           80 NGREADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .+.. ......++.++..-++++++
T Consensus       104 ~G~~-~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         104 TGSP-EILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             SCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred             CCcH-HHHHHHHhcccCceEEEEEe
Confidence            8753 22334455555444677655

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.04  E-value=0.6  Score=29.05  Aligned_cols=64  Identities=17%  Similarity=0.165  Sum_probs=46.5

Q ss_pred             cchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      +.+.+.+++|.+.|++++.+..++........            -..-+...-...+.+.+.++.+++|.|+-..|
T Consensus        28 y~~~~a~~alke~g~~~iliN~NP~TVstd~d------------~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          28 YSGAQACKALREEGYRVINVNSNPATIMTDPE------------MADATYIEPIHWEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------------GSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHHcCCeEEEecCchHhhhcChh------------hcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence            46778999999999999999888777433221            12223344456889999998889999986655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=88.96  E-value=0.11  Score=35.11  Aligned_cols=29  Identities=10%  Similarity=0.138  Sum_probs=25.9

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|+.++..++..|++|+++++++..
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            45999999999999999999999998654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.61  E-value=0.22  Score=30.75  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|++|-.++..|.+.|.+|+++.|...-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            56999999999999999999999988654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.53  E-value=0.17  Score=31.40  Aligned_cols=28  Identities=39%  Similarity=0.600  Sum_probs=25.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (246)
                      |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEecccc
Confidence            6799999999999999999999988654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.06  E-value=0.057  Score=35.13  Aligned_cols=30  Identities=20%  Similarity=0.457  Sum_probs=24.5

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (246)
                      +|| |.+|..++..|...+.  ++..+++++++
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            475 9999999999998874  78888877654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.06  E-value=0.21  Score=30.99  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (246)
                      |.|++|..++..|.+.|.+|+++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            56999999999999999999999875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=87.84  E-value=0.96  Score=29.85  Aligned_cols=90  Identities=11%  Similarity=0.125  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceE-EEE-ccCCC-HHHHHHhhhcCCccEEEe
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLK-GDRKD-YDFVKSSLSAKGFDVVYD   78 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~-~D~~~-~~~~~~~~~~~~~d~vi~   78 (246)
                      |.|-+|...+..+...| .+|+++++++.+.....           ..+.. ++. -|-.+ .+.+.+.....++|++|.
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-----------~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-----------AVGATECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-----------hcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence            45999999999999998 58999999888742111           12222 222 12222 344555555568999999


Q ss_pred             cCCCCccchHHHHHhCC-CCceEEEEe
Q 025908           79 INGREADEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        79 ~~~~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      +.+.... ....+..+. +.-+++.++
T Consensus       106 ~~g~~~~-~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         106 VIGHLET-MIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             CSCCHHH-HHHHHTTSCTTTCEEEECS
T ss_pred             eCCchHH-HHHHHHHhhcCCeEEEEEE
Confidence            9875322 222333343 445777666

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.66  E-value=0.22  Score=28.24  Aligned_cols=29  Identities=21%  Similarity=0.149  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|.+|+-++.+..+-|+++++++-.++.
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            57999999999999999999999987665

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.52  E-value=0.21  Score=30.74  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            56999999999999999999999987644

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=87.52  E-value=0.041  Score=35.53  Aligned_cols=30  Identities=17%  Similarity=0.261  Sum_probs=23.5

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (246)
                      +|+ |.+|..++-.|..++  .++..+++++++
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            476 999999999999987  489999988766

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.50  E-value=0.2  Score=30.68  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            67999999999999999999999887644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.18  E-value=0.18  Score=33.39  Aligned_cols=91  Identities=16%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|.+|...+..+...|. .|++.++++.+.. ...        + ....+++..+-.+.+...+.....++|+||.+++
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~-~~~--------~-~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAE--------R-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHH--------H-TTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHH-HHh--------h-cccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            459999999998887774 6777777665521 111        0 1223444333223344444444457999999997


Q ss_pred             CCccchHHHHHhCCCCceEEEEe
Q 025908           82 READEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      ... .....++.++..-+++.++
T Consensus       110 ~~~-~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQA-TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CHH-HHHHGGGGEEEEEEEEECC
T ss_pred             cch-HHHHHHHHHhCCCEEEEEe
Confidence            531 2233344444345666554

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.15  E-value=0.27  Score=30.16  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|..++..|.+.|.+|+++.|.+..
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            56999999999999999999999987654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=87.10  E-value=0.21  Score=31.95  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=25.5

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (246)
                      +|| |.+|..++..|...+  .++..+++++.+
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~   37 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGI   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEecccccc
Confidence            475 999999999999987  589999888766

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.04  E-value=0.24  Score=36.01  Aligned_cols=29  Identities=14%  Similarity=0.212  Sum_probs=26.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      .||..|.+|++.|+.+|++|+.+.+..+-
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s~   72 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARSA   72 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence            58999999999999999999999887544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=86.84  E-value=0.61  Score=30.57  Aligned_cols=29  Identities=10%  Similarity=0.263  Sum_probs=25.2

Q ss_pred             ccccchHHHHHHHHHCCC-eEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~   31 (246)
                      |+|..|++++..|.+.|. +|.++.|+.++
T Consensus        24 GaGGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            569999999999999995 79999888765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.67  E-value=0.29  Score=30.46  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            56999999999999999999999997644

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=86.30  E-value=0.071  Score=34.54  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=23.8

Q ss_pred             CCccccchHHHHHHHHHCC--CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (246)
                      +| .|.+|..++-.|+.+|  .++..+++++.+
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            46 5999999999999887  478888776554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=86.30  E-value=1.2  Score=28.39  Aligned_cols=29  Identities=24%  Similarity=0.316  Sum_probs=22.2

Q ss_pred             CCccccchHHHHHHHHH-CC--CeEEEEecCC
Q 025908            1 MGGTRFIGVFLSRLLVK-EG--HQVTLFTRGK   29 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~-~g--~~V~~l~r~~   29 (246)
                      +|++|.+|++++-.|.. .+  .++..++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            58899999999987754 33  6888887643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.15  E-value=0.26  Score=30.60  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|-.++..|.+.|.+|+++.|.+..
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            56999999999999999999999998766

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.40  E-value=0.27  Score=31.90  Aligned_cols=91  Identities=9%  Similarity=0.013  Sum_probs=46.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCC--CCchhhhhhcCceEEEEccCCCHHHHHHh----hhc-CCccE
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSS----LSA-KGFDV   75 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~----~~~-~~~d~   75 (246)
                      |.|.+|..+++.|++.|+.+ +..|..++.......  ........... ..++...+.+.+.+...    +.. ..-..
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~v~~~~~~l~~~~~~~~~   84 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAE-ARVIFTCLPTTREVYEVAEALYPYLREGTY   84 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGG-CSEEEECCSSHHHHHHHHHHHTTTCCTTEE
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccc-eeEEEecccchhhhhhhhcccccccccccc
Confidence            56999999999999998865 466665542111100  00000011111 22222223333333222    221 24566


Q ss_pred             EEecCCCCccchHHHHHhCC
Q 025908           76 VYDINGREADEVEPILDALP   95 (246)
Q Consensus        76 vi~~~~~~~~~~~~l~~a~~   95 (246)
                      +++++.......+.+.+.++
T Consensus        85 iid~sT~~p~~~~~~~~~~~  104 (156)
T d2cvza2          85 WVDATSGEPEASRRLAERLR  104 (156)
T ss_dssp             EEECSCCCHHHHHHHHHHHH
T ss_pred             ccccccCCHHHHHHHHHHHH
Confidence            77777777777777766655

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=84.77  E-value=0.2  Score=32.78  Aligned_cols=71  Identities=10%  Similarity=-0.080  Sum_probs=50.3

Q ss_pred             cccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCCC
Q 025908            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~~   83 (246)
                      =|++|+.+++.|...|.+|++.-.+|-+..+..           .+++++.        .+.++++  ..|++|.+.|..
T Consensus        31 YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-----------mdGf~v~--------~~~~a~~--~aDi~vTaTGn~   89 (163)
T d1v8ba1          31 YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNVV--------TLDEIVD--KGDFFITCTGNV   89 (163)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEEC--------CHHHHTT--TCSEEEECCSSS
T ss_pred             ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-----------hcCCccC--------chhHccc--cCcEEEEcCCCC
Confidence            388999999999999999999988876643322           2445432        3456776  889999988875


Q ss_pred             ccchHHHHHhCC
Q 025908           84 ADEVEPILDALP   95 (246)
Q Consensus        84 ~~~~~~l~~a~~   95 (246)
                      ..-...-++.++
T Consensus        90 ~vI~~~h~~~MK  101 (163)
T d1v8ba1          90 DVIKLEHLLKMK  101 (163)
T ss_dssp             SSBCHHHHTTCC
T ss_pred             ccccHHHHHHhh
Confidence            444455556666

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.71  E-value=0.34  Score=30.20  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.0

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            56999999999999999999999987644

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=84.27  E-value=0.79  Score=30.08  Aligned_cols=29  Identities=17%  Similarity=-0.004  Sum_probs=25.5

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|-.+++++..|.+.|.+|+++.|+.++
T Consensus        25 GaGGaarai~~al~~~g~~i~I~nRt~~k   53 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDCAVTITNRTVSR   53 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCcHHHHHHHHHhcccceEEEeccchHHH
Confidence            45888999999999999999999998766

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.14  E-value=0.63  Score=30.29  Aligned_cols=29  Identities=17%  Similarity=0.125  Sum_probs=25.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |.|.+|...+..+...|.+|+++++++.+
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~   63 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAK   63 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhH
Confidence            35899999999888899999999988766

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=83.91  E-value=0.13  Score=34.00  Aligned_cols=89  Identities=13%  Similarity=0.176  Sum_probs=61.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |.|-.|.+-++.+...|.+|++++.+..+.. .+.       ..+...++..   ..+.+.+.+.++  ++|+||.++-.
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~-~l~-------~~~~~~~~~~---~~~~~~l~~~~~--~aDivI~aali  105 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLS-YLE-------TLFGSRVELL---YSNSAEIETAVA--EADLLIGAVLV  105 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH-------HHHGGGSEEE---ECCHHHHHHHHH--TCSEEEECCCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH-HHH-------Hhhcccceee---hhhhhhHHHhhc--cCcEEEEeeec
Confidence            4588899999999999999999999876631 111       0112333332   346788888998  99999998754


Q ss_pred             C-----ccchHHHHHhCCCCceEEEEe
Q 025908           83 E-----ADEVEPILDALPNLEQFIYCS  104 (246)
Q Consensus        83 ~-----~~~~~~l~~a~~~~~~~i~~S  104 (246)
                      .     .--++.+++.++.-.-+|-++
T Consensus       106 pG~~aP~lIt~~mv~~Mk~GSVIVDva  132 (168)
T d1pjca1         106 PGRRAPILVPASLVEQMRTGSVIVDVA  132 (168)
T ss_dssp             TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred             CCcccCeeecHHHHhhcCCCcEEEEee
Confidence            2     223678888888545566555

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.47  E-value=0.87  Score=29.85  Aligned_cols=76  Identities=13%  Similarity=0.186  Sum_probs=43.9

Q ss_pred             ccccchHHHHHHHHHC-CCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCC
Q 025908            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (246)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~   81 (246)
                      |.|++|+.+++.|.+. +.++.++........               .......     ..+....+.  ++|+|+.+..
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------------~~~~~~~-----~~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------------TKTPVFD-----VADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------------SSSCEEE-----GGGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEecccccc---------------ccccccc-----chhhhhhcc--ccceEEEeCC
Confidence            5799999999999876 467776655443311               1111111     112223344  8999997766


Q ss_pred             CCccchHHHHHhCCCCceEE
Q 025908           82 READEVEPILDALPNLEQFI  101 (246)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i  101 (246)
                      .. .+......+++..+++|
T Consensus        68 ~~-~h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SA-TDIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TT-THHHHHHHHHTTTSEEE
T ss_pred             Cc-ccHHHHHHHHHCCCcEE
Confidence            54 34555556666444555

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=83.47  E-value=0.42  Score=31.33  Aligned_cols=29  Identities=17%  Similarity=0.368  Sum_probs=24.1

Q ss_pred             ccccchHHHHHHHHHCCC--eEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (246)
                      |.|.+|.++++.|.+.|+  +|++.+|++..
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            469999999999999985  68888877554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=83.08  E-value=0.25  Score=33.38  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=25.8

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|..|.+++..|.+.|++|++..|+++.
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~   42 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEE   42 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHH
Confidence            56999999999999999999999997643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=82.48  E-value=1.1  Score=29.44  Aligned_cols=89  Identities=12%  Similarity=0.020  Sum_probs=53.0

Q ss_pred             cccchHHHHHHHHHCCC-eEEEEecCCCccccCCCCCCchhhhhhcCceE-EEEccCCC--HHHHHHhhhcCCccEEEec
Q 025908            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (246)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~--~~~~~~~~~~~~~d~vi~~   79 (246)
                      .|-+|...++.+...|. +|+++++++.+.....           ..+.. ++...-.|  .++........++|++|.+
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-----------~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-----------ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHHHHH-----------HcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            48899999999998885 7888888877632111           12333 22222122  3444444444589999999


Q ss_pred             CCCCccchHHHHHhCC-CCceEEEEe
Q 025908           80 NGREADEVEPILDALP-NLEQFIYCS  104 (246)
Q Consensus        80 ~~~~~~~~~~l~~a~~-~~~~~i~~S  104 (246)
                      ++.. ......+..++ +.-+++.+.
T Consensus       105 ~g~~-~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         105 AGRI-ETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             SCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred             CCCc-hHHHHHHHHHHHhcCceEEEE
Confidence            8753 23334555554 445666555

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=82.21  E-value=0.32  Score=31.57  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=23.4

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (246)
                      +|+ |.+|..++..|...+ .++..++.+++.
T Consensus        13 IGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1          13 IGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            365 999999998888777 488888776654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=81.91  E-value=0.83  Score=30.03  Aligned_cols=87  Identities=17%  Similarity=0.143  Sum_probs=51.1

Q ss_pred             CccccchHHHHHHHHHCC-CeEEEEecCCCccccCCCCCCchhhhhhcCceEEEE--ccCCC-HHHHHHhhhcCCccEEE
Q 025908            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKD-YDFVKSSLSAKGFDVVY   77 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~D~~~-~~~~~~~~~~~~~d~vi   77 (246)
                      |+ |-+|...+..+...| .+|+++++++.+.....           ..+.....  .+..+ .+...+.....++|++|
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-----------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----------EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-----------HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            66 558999999888887 58999988887732111           12222222  22222 34444455545899999


Q ss_pred             ecCCCCccchHHHHHhCC-CCceEE
Q 025908           78 DINGREADEVEPILDALP-NLEQFI  101 (246)
Q Consensus        78 ~~~~~~~~~~~~l~~a~~-~~~~~i  101 (246)
                      .+.+.. ......++.++ +...++
T Consensus       104 d~~G~~-~~~~~a~~~~~~~~g~~~  127 (176)
T d2jhfa2         104 EVIGRL-DTMVTALSCCQEAYGVSV  127 (176)
T ss_dssp             ECSCCH-HHHHHHHHHBCTTTCEEE
T ss_pred             ecCCch-hHHHHHHHHHhcCCcceE
Confidence            998764 22334455565 333444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=81.46  E-value=0.17  Score=33.21  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=24.7

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (246)
                      +|+ |.+|..++..|...|.  ++..++++++.
T Consensus        26 IGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          26 VGV-GQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            365 9999999999999984  88888876544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=81.13  E-value=1.5  Score=28.57  Aligned_cols=17  Identities=12%  Similarity=0.255  Sum_probs=12.7

Q ss_pred             HHhhhcCCccEEEecCCCC
Q 025908           65 KSSLSAKGFDVVYDINGRE   83 (246)
Q Consensus        65 ~~~~~~~~~d~vi~~~~~~   83 (246)
                      .+.++  +.|+||.++|..
T Consensus        75 ~~~~~--~ADivI~a~G~p   91 (166)
T d1b0aa1          75 RHHVE--NADLLIVAVGKP   91 (166)
T ss_dssp             HHHHH--HCSEEEECSCCT
T ss_pred             HHHHh--hhhHhhhhccCc
Confidence            34455  899999998864

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=80.80  E-value=3.6  Score=27.64  Aligned_cols=92  Identities=12%  Similarity=-0.068  Sum_probs=54.3

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccC--CCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~   80 (246)
                      |++..+..+.+.|++.|++|.++...+++....  ..............++.....+..+.+...+.++..++|.++.+.
T Consensus        10 G~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~   89 (206)
T d1fmta2          10 GTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVA   89 (206)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTCSEEEEES
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhcceEEEeec
Confidence            345677888999999999987766554332111  111111122223456777776666666677777777899887665


Q ss_pred             CCCccchHHHHHhCC
Q 025908           81 GREADEVEPILDALP   95 (246)
Q Consensus        81 ~~~~~~~~~l~~a~~   95 (246)
                      ... ---..+++..+
T Consensus        90 ~~~-ii~~~il~~~k  103 (206)
T d1fmta2          90 YGL-ILPKAVLEMPR  103 (206)
T ss_dssp             CCS-CCCHHHHHSST
T ss_pred             ccc-ccchhhHhcCC
Confidence            543 23345666654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=80.63  E-value=0.22  Score=33.06  Aligned_cols=29  Identities=14%  Similarity=0.022  Sum_probs=25.4

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|..+++++..|.+.+.+|+++.|+.++
T Consensus        25 GaGGaarai~~aL~~~~~~i~I~nR~~~~   53 (171)
T d1p77a1          25 GAGGATKGVLLPLLQAQQNIVLANRTFSK   53 (171)
T ss_dssp             CCSHHHHTTHHHHHHTTCEEEEEESSHHH
T ss_pred             CCcHHHHHHHHHHcccCceeeeccchHHH
Confidence            56888999999999888899999998766

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.53  E-value=0.15  Score=33.48  Aligned_cols=30  Identities=13%  Similarity=0.211  Sum_probs=24.2

Q ss_pred             CCccccchHHHHHHHHHCCC--eEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (246)
                      +|+ |.+|..++..|...+.  ++..+++++++
T Consensus        25 IGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          25 VGV-GDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             ECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            464 9999999999999874  78888876544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=80.48  E-value=0.76  Score=28.06  Aligned_cols=29  Identities=14%  Similarity=0.200  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCc
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (246)
                      |+|++|..++..|.+.|.+|.++.|.+..
T Consensus        29 GgG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          29 GGSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCHHHHHHHHHHHhcchhheEeeccchh
Confidence            67999999999999999999999997644

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=80.47  E-value=0.68  Score=31.46  Aligned_cols=65  Identities=17%  Similarity=0.129  Sum_probs=41.1

Q ss_pred             ccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCCHHHHHHhhhcCCccEEEecCCC
Q 025908            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~d~vi~~~~~   82 (246)
                      |-|.+|+++++.|.+.|.+|++.+.+.......           ...+.+.+     +.+   +++. ..+|+++-|+..
T Consensus        34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-----------~~~g~~~~-----~~~---~~~~-~~~DI~iPcA~~   93 (201)
T d1c1da1          34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-----------VALGHTAV-----ALE---DVLS-TPCDVFAPCAMG   93 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCEEC-----CGG---GGGG-CCCSEEEECSCS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-----------Hhhccccc-----Ccc---cccc-ccceeeeccccc
Confidence            568899999999999999999876654332110           01222222     222   3444 489999988876


Q ss_pred             Cccch
Q 025908           83 EADEV   87 (246)
Q Consensus        83 ~~~~~   87 (246)
                      +....
T Consensus        94 ~~I~~   98 (201)
T d1c1da1          94 GVITT   98 (201)
T ss_dssp             CCBCH
T ss_pred             ccccH
Confidence            54443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=80.40  E-value=0.4  Score=30.96  Aligned_cols=30  Identities=30%  Similarity=0.483  Sum_probs=22.9

Q ss_pred             CCccccchHHHHHHHHHCC-CeEEEEecCCCc
Q 025908            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (246)
Q Consensus         1 ~GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (246)
                      +| .|.+|..++..|...+ .++..+++++.+
T Consensus         9 IG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           9 VG-SGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             EC-CCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            36 4999999998777776 478887776655

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=80.31  E-value=2.2  Score=30.94  Aligned_cols=65  Identities=20%  Similarity=0.246  Sum_probs=40.7

Q ss_pred             CccccchHHHHHHHHHCCCeEEEEecCCCccccCCCCCCchhhhhhcCceEEEEccCCC----------HHHHHHhhhcC
Q 025908            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----------YDFVKSSLSAK   71 (246)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----------~~~~~~~~~~~   71 (246)
                      ||.+..-..+++.|.++||+|.++++.....   .           ..+++++......          ...+...++..
T Consensus        13 GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (370)
T d2iw1a1          13 GGLQRDFMRIASTVAARGHHVRVYTQSWEGD---C-----------PKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEH   78 (370)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCEEEEESEECSC---C-----------CTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCC---C-----------CCceEEEEcCccccccchhhHHHHHHHHHHHHhc
Confidence            5656666788999999999999998653321   1           2455555554331          12233445556


Q ss_pred             CccEEEecC
Q 025908           72 GFDVVYDIN   80 (246)
Q Consensus        72 ~~d~vi~~~   80 (246)
                      .+|.|++..
T Consensus        79 ~~d~v~~~~   87 (370)
T d2iw1a1          79 PADRVVGFN   87 (370)
T ss_dssp             CCSEEEESS
T ss_pred             ccceeeecc
Confidence            889887554

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=80.24  E-value=1.5  Score=28.98  Aligned_cols=26  Identities=15%  Similarity=0.229  Sum_probs=20.9

Q ss_pred             ccccchHHHHHHHHHCC-CeEEEEecC
Q 025908            3 GTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (246)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~   28 (246)
                      |.|.||+.+++.|.+++ .+|.++...
T Consensus         8 GfGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           8 GYGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            46889999999999875 688777543