Citrus Sinensis ID: 025922

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
Protein Sequence
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL
Secondary Structure (PSIPRED)
cccccccccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEcccEEEEEEccccEEccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTnygpalydggldSVTAVAVLILFHCLLVMLLWSYFSVVLtdagsvppnwrpaldeergeadplnasefsgaqsdplnprirycrkcnqlkpprchhcsvcgrcilkmdhhcVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFisffsegeipgtpgtlATTFLAFVLNLAFALSVLGFLIMHISLVSAntttievl
Flexible Loop (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPlnasefsgaqsdplnpRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVsantttievl
Low Complexity Region (SEG)
MHRSGAAMAWNVFKFCTALRGLGSIMIllvlgvvgvtyyavvltNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAlnykyfllfllytflETSLVTLSLLPHFISFFSEGEIPGTPGtlattflafvlnlafalsvlGFLIMHISLVSANTTTIEVL
Disordered region (IsUnstruct)
******AMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSV*********************************RIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTT*****
Disordered Region (DISOPRED)
*********WNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRP*************************NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIE*L
Disordered Region (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL
Disordered Region (DISPRO)
*******MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW*********EADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTT*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	246	2.2.26 [Sep-21-2011]
Q8VYP5	307	Probable S-acyltransferas	yes	no	0.991	0.794	0.837	1e-113
Q94C49	302	Probable S-acyltransferas	no	no	0.955	0.778	0.694	9e-80
Q5M757	291	Probable S-acyltransferas	no	no	0.922	0.780	0.569	4e-62
Q5Y5T1	380	Probable palmitoyltransfe	yes	no	0.943	0.610	0.333	2e-32
Q9UIJ5	367	Palmitoyltransferase ZDHH	yes	no	0.882	0.591	0.348	4e-31
P59267	366	Palmitoyltransferase ZDHH	no	no	0.821	0.551	0.349	4e-30
Q9JKR5	366	Palmitoyltransferase ZDHH	yes	no	0.845	0.568	0.345	4e-30
Q5FWL7	338	Palmitoyltransferase ZDHH	N/A	no	0.821	0.597	0.364	1e-28
Q5W0Z9	365	Probable palmitoyltransfe	no	no	0.934	0.630	0.363	1e-28
Q0VC89	365	Probable palmitoyltransfe	no	no	0.902	0.608	0.370	3e-28

>sp|Q8VYP5|ZDH14_ARATH Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/246 (83%), Positives = 222/246 (90%), Gaps = 2/246 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query: 121 --NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTF 178
             NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTF
Sbjct: 121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query: 179 LETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSA 238
           LET+LVTL L+PHFI+FFS+ EIPGTPGTLATTFLAFVLNLAFALSV+GFLIMHISLV+ 
Sbjct: 181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAG 240

Query: 239 NTTTIE 244
           NTTTIE
Sbjct: 241 NTTTIE 246

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q94C49|ZDH18_ARATH Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1

 Score =  296 bits (758), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 166/239 (69%), Positives = 192/239 (80%), Gaps = 4/239 (1%)

Query: 8   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF 67
           MAWNVFKFCTALR LGSIMIL+V+G++G TYYAVV+ NYGPAL  GG+DS+ +V VL  F
Sbjct: 1   MAWNVFKFCTALRALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFF 60

Query: 68  HCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYC 127
           H LL+MLLWSYFSVV+TD G VP  WRP LD E+ E +     E S    D  +  +RYC
Sbjct: 61  HFLLIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEAS--VGDSSSHGVRYC 118

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
           RKCNQ KPPR HHCSVCGRCILKMDHHCVWVVNCVGA NYK FLLFL YTFLET++V +S
Sbjct: 119 RKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVS 178

Query: 188 LLPHFISFFS--EGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIE 244
           LLP F+ FFS  +G+I  +PG+LA +F+AFVLN+AFALSVLGFLIMHI LV+ NTTTIE
Sbjct: 179 LLPIFLVFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLIMHIMLVARNTTTIE 237

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5M757|ZDH15_ARATH Probable S-acyltransferase At4g00840 OS=Arabidopsis thaliana GN=At4g00840 PE=2 SV=1

 Score =  237 bits (605), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/239 (56%), Positives = 172/239 (71%), Gaps = 12/239 (5%)

Query: 11  NVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF--H 68
           N+F+FC+ L+ LG  MILLV+ VVGV+YYAVV++ + P L  G   +++A+A LI+F  H
Sbjct: 2   NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query: 69  CLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDP-LNPRIRYC 127
            LL+MLLWSYF+ V TD GSVP ++R     E G  D L A    G  +D      + YC
Sbjct: 62  FLLIMLLWSYFTTVFTDPGSVPEHFR----REMGGGDSLEA----GTSTDQGAFGSLGYC 113

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
            KC  +KPPRCHHCSVC RC+LKMDHHCVW+VNCVGA NYK+FLLFL YTFLET L  + 
Sbjct: 114 TKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIV 173

Query: 188 LLPHFISFFSEG-EIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV 245
           LLP FI FFS+  +   +PG LA+  LAFVLN AF LS+L F++MHISL+S+NTT++EV
Sbjct: 174 LLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSSNTTSVEV 232

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T1|ZDH20_MOUSE Probable palmitoyltransferase ZDHHC20 OS=Mus musculus GN=Zdhhc20 PE=2 SV=1

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 121/258 (46%), Gaps = 26/258 (10%)

Query: 10  WNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHC 69
           W +++ C   R +G + +L +  VV  +YYA V+      +   G    T V  L+ FH 
Sbjct: 4   WTLWRCCQ--RVVGWVPVLFITFVVVWSYYAYVVELCVSTISRTGEKGKTVV-YLVAFHL 60

Query: 70  LLVMLLWSYFSVVLTD----------AGSVPPNWRPALDEERGEADPLNASEFSGAQSDP 119
             VM +WSY+  + T           + S    +     +ER +     A+      +  
Sbjct: 61  FFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQDILRRAARDLPIYTTS 120

Query: 120 LNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL 179
            +  IRYC KC  +KP R HHCS C RC+LKMDHHC WV NCVG  NYK+F+LFLLY+ L
Sbjct: 121 ASKAIRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLL 180

Query: 180 ETSLVTLSLLPHFISFFS-------------EGEIPGTPGTLATTFLAFVLNLAFALSVL 226
               V  ++L +FI F++             E  +   P         F ++  F +SVL
Sbjct: 181 YCLFVAATVLEYFIKFWTLCRRKSTENCPKNEPTVLNFPSAKFHVLFLFFVSAMFFVSVL 240

Query: 227 GFLIMHISLVSANTTTIE 244
                H  LV  N TTIE
Sbjct: 241 SLFSYHCWLVGKNRTTIE 258

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UIJ5|ZDHC2_HUMAN Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=2 SV=1

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 20  RGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYF 79
           R L  I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+
Sbjct: 16  RVLYWIPVVFITLLLGWSYYAYAIQLCIVSMENTG----EQVVCLMAYHLLFAMFVWSYW 71

Query: 80  SVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSD---------PLNPR-----IR 125
             + T    +P N          E D L       A  +         P+  R     IR
Sbjct: 72  KTIFT----LPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIR 127

Query: 126 YCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVT 185
           YC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    + 
Sbjct: 128 YCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIA 187

Query: 186 LSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV 245
            + L +FI F++ G +P T       FL F   + F++S+      H  LVS N +T+E 
Sbjct: 188 ATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEA 245

Query: 246 L 246
            
Sbjct: 246 F 246

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P59267|ZDHC2_MOUSE Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdhhc2 PE=2 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 122/246 (49%), Gaps = 44/246 (17%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+  + T
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIG----EQVVCLMAYHLLFAMFVWSYWKTIFT 75

Query: 85  DAGSVPPNWRPALD-------------EERGEAD-----------PLNASEFSGAQSDPL 120
               +P N  P+ +             E RGEA            P+     SGA     
Sbjct: 76  ----LPMN--PSKEFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGA----- 124

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
              IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L 
Sbjct: 125 ---IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLY 181

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
              +  + L +FI F++ G +P T       FL F   + F++S+      H  LVS N 
Sbjct: 182 CLFIAATDLQYFIRFWTNG-LPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNK 239

Query: 241 TTIEVL 246
           +T+E  
Sbjct: 240 STLEAF 245

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9JKR5|ZDHC2_RAT Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus GN=Zdhhc2 PE=2 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 32/240 (13%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+  + T
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIG----EQVVCLMAYHLLFAMFVWSYWKTIFT 75

Query: 85  DAGSVPPNWRPALDEE-------RGEAD-----------PLNASEFSGAQSDPLNPRIRY 126
              +    +  +  E+       RGEA            P+     SGA        IRY
Sbjct: 76  LPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGA--------IRY 127

Query: 127 CRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTL 186
           C +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  
Sbjct: 128 CDRCRLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAA 187

Query: 187 SLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL 246
           + L +FI F++ G +P T       FL F   + F++S+      H  LVS N +T+E  
Sbjct: 188 TDLQYFIRFWTNG-LPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTLEAF 245

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5FWL7|ZDH15_XENLA Palmitoyltransferase ZDHHC15 OS=Xenopus laevis GN=zdhhc15 PE=2 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 20/222 (9%)

Query: 41  VVLTNYGPALYDGGLDSVT----AVAVLILFHCLLVMLLWSYFSVVLTDAGS------VP 90
           VVL +Y   +++  L +VT      A L++FH + ++ +W+Y+  + T          +P
Sbjct: 31  VVLWSYYAYVWELCLVTVTNPAEKAAYLLIFHTVFLLFIWTYWKAIFTPPKQPTKKFLLP 90

Query: 91  PNWRPALD-EERGEADPLNASEFSGAQSDPLNPRI-----RYCRKCNQLKPPRCHHCSVC 144
              +   D EER EA     +EF  A+  P+  R      R+C  C  +KP RCHHCSVC
Sbjct: 91  YAEKERYDNEERPEAQKQIVAEF--ARKLPVYTRTGSGATRFCDTCQMVKPDRCHHCSVC 148

Query: 145 GRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGT 204
           G C+LKMDHHC WV NC+G  NYK+FLLFL Y  L    +  ++  +FI ++++    G 
Sbjct: 149 GMCVLKMDHHCPWVNNCIGYSNYKFFLLFLAYAMLYCLYIGCTVFQYFILYWTDTLSNGR 208

Query: 205 PGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL 246
                  FL FV  L F +S++     H  LVS N TT+E  
Sbjct: 209 -AKFHVLFLLFV-ALMFFISLMFLFGYHCWLVSLNRTTLEAF 248

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5W0Z9|ZDH20_HUMAN Probable palmitoyltransferase ZDHHC20 OS=Homo sapiens GN=ZDHHC20 PE=1 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 15/245 (6%)

Query: 10  WNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHC 69
           W +++ C   R +G + +L +  VV  +YYA V+      ++ G  ++   V  L+ FH 
Sbjct: 4   WTLWRCCQ--RVVGWVPVLFITFVVVWSYYAYVVELCVFTIF-GNEENGKTVVYLVAFHL 60

Query: 70  LLVMLLWSYFSVVLTD----------AGSVPPNWRPALDEERGEADPLNASEFSGAQSDP 119
             VM +WSY+  + T           + S    +     +ER +     A+      +  
Sbjct: 61  FFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQEILRRAARALPIYTTS 120

Query: 120 LNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL 179
            +  IRYC KC  +KP R HHCS C  CILKMDHHC WV NCVG  NYK+FLLFLLY+ L
Sbjct: 121 ASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLL 180

Query: 180 ETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSAN 239
               V  ++L +FI F++  E+  T       FL FV  + F +SVL     H  LV  N
Sbjct: 181 YCLFVAATVLEYFIKFWT-NELTDTRAKFHVLFLFFVSAM-FFISVLSLFSYHCWLVGKN 238

Query: 240 TTTIE 244
            TTIE
Sbjct: 239 RTTIE 243

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q0VC89|ZDH20_BOVIN Probable palmitoyltransferase ZDHHC20 OS=Bos taurus GN=ZDHHC20 PE=2 SV=1

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 119/235 (50%), Gaps = 13/235 (5%)

Query: 20  RGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYF 79
           R +G + +L +  VV  +YYA V+      L   G ++  AV  L+ FH   VM +WSY+
Sbjct: 12  RTVGWVPVLFITFVVVWSYYAYVVELCVFTLSGNG-ENGKAVVYLVAFHLFFVMFVWSYW 70

Query: 80  SVVLTD----------AGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRK 129
             + T           + S    +     +ER +     A+      +   +  +RYC +
Sbjct: 71  MTIFTSPASPSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCER 130

Query: 130 CNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLL 189
           C  +KP R HHCS C  CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    V  ++L
Sbjct: 131 CQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLFYSLLYCLFVATTVL 190

Query: 190 PHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIE 244
            +FI F++  E+  T       FL FV  + F +SVL  L  H  LV  N TTIE
Sbjct: 191 QYFIKFWT-NELTDTRAKFHVLFLFFVSTM-FFISVLSLLSYHCWLVGKNRTTIE 243

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
255541300	307	zinc finger protein, putative [Ricinus c	0.991	0.794	0.913	1e-120
224129994	309	predicted protein [Populus trichocarpa]	0.991	0.789	0.909	1e-120
356506038	304	PREDICTED: probable S-acyltransferase At	0.987	0.799	0.885	1e-116
449432251	307	PREDICTED: probable S-acyltransferase At	0.991	0.794	0.889	1e-116
356496388	304	PREDICTED: probable S-acyltransferase At	0.987	0.799	0.881	1e-116
255638237	307	unknown [Glycine max]	0.991	0.794	0.803	1e-115
225453943	307	PREDICTED: probable S-acyltransferase At	0.991	0.794	0.868	1e-115
296089167	300	unnamed protein product [Vitis vinifera]	0.963	0.79	0.869	1e-111
297820932	306	zinc finger family protein [Arabidopsis	0.991	0.797	0.836	1e-111
22331887	307	putative S-acyltransferase [Arabidopsis	0.991	0.794	0.837	1e-111

>gi|255541300|ref|XP_002511714.1| zinc finger protein, putative [Ricinus communis] gi|223548894|gb|EEF50383.1| zinc finger protein, putative [Ricinus communis]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/244 (91%), Positives = 230/244 (94%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL DGG DS TA
Sbjct: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALQDGGFDSCTA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLI FHCLLVMLLWSYFSVVLTD G VPPNWRPA+DEERGEADPLN S+FSG  +D  
Sbjct: 61  LAVLIPFHCLLVMLLWSYFSVVLTDPGGVPPNWRPAIDEERGEADPLNGSDFSGVLTDSS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCNQ KPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 NQRIRYCRKCNQQKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           TSLVTLSLLPHFI+FFS+GEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT
Sbjct: 181 TSLVTLSLLPHFIAFFSDGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240

Query: 241 TTIE 244
           TTIE
Sbjct: 241 TTIE 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129994|ref|XP_002320722.1| predicted protein [Populus trichocarpa] gi|222861495|gb|EEE99037.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/244 (90%), Positives = 230/244 (94%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRS A MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVL NYGPALYDGG+DS+ +
Sbjct: 1   MHRSRAVMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLNNYGPALYDGGIDSLVS 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLI FH LLVMLLWSYFSVVLTD GSVPPNWRPA+DEERGEADPLN SEFSG QSD  
Sbjct: 61  LAVLIPFHSLLVMLLWSYFSVVLTDPGSVPPNWRPAIDEERGEADPLNGSEFSGVQSDQS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 NQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           TSLVTLSL PHFI+FFS+GEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT
Sbjct: 181 TSLVTLSLSPHFIAFFSDGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240

Query: 241 TTIE 244
           TTIE
Sbjct: 241 TTIE 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506038|ref|XP_003521795.1| PREDICTED: probable S-acyltransferase At3g60800-like [Glycine max]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/244 (88%), Positives = 228/244 (93%), Gaps = 1/244 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVG TYYAVVLTNYGPALY GGLDS+ A
Sbjct: 1   MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGATYYAVVLTNYGPALYAGGLDSLVA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLILFH LLVMLLWSYFSVV TD GSVPPNW+P +DEERGEADPL  +EFS   SDP 
Sbjct: 61  LAVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPTIDEERGEADPLVGTEFSNLPSDP- 119

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           NPR+RYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 120 NPRVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 179

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           T+LVT SLLPHFI+FFS+GEIPGTPG+LATTFLAFVLNLAFALSVLGFLIMHISLV+ANT
Sbjct: 180 TTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAANT 239

Query: 241 TTIE 244
           TTIE
Sbjct: 240 TTIE 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432251|ref|XP_004133913.1| PREDICTED: probable S-acyltransferase At3g60800-like [Cucumis sativus] gi|449526128|ref|XP_004170066.1| PREDICTED: probable S-acyltransferase At3g60800-like [Cucumis sativus]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/244 (88%), Positives = 226/244 (92%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG AMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDS+ A
Sbjct: 1   MHRSGPAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSLIA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
            AVLI FHCLLVMLLWSYFSVVLTD GSVPPNWRPA+DEER E DPLN  EFS    +  
Sbjct: 61  FAVLISFHCLLVMLLWSYFSVVLTDPGSVPPNWRPAVDEERAEGDPLNTMEFSILHPELS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCN LKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE
Sbjct: 121 NQRIRYCRKCNHLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           TS+VTLSLLPHFI+FFSEGEIPGTP TLATTF+AFVLNLAFALSV+GFLIMHISLV+ANT
Sbjct: 181 TSVVTLSLLPHFIAFFSEGEIPGTPSTLATTFIAFVLNLAFALSVMGFLIMHISLVAANT 240

Query: 241 TTIE 244
           TTIE
Sbjct: 241 TTIE 244

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496388|ref|XP_003517050.1| PREDICTED: probable S-acyltransferase At3g60800-like isoform 1 [Glycine max]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/244 (88%), Positives = 227/244 (93%), Gaps = 1/244 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALY GGLDS+ A
Sbjct: 1   MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYAGGLDSLVA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLILFH LLVMLLWSYFSVV TD GSVPPNW+P +DEERGEADPL  +EFS   SDP 
Sbjct: 61  LAVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPMIDEERGEADPLVGTEFSNVLSDP- 119

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N R+RYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYK FLLFL YTFLE
Sbjct: 120 NQRVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKCFLLFLFYTFLE 179

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           T+LVT SLLPHFI+FFS+GEIPGTPG+LATTFLAFVLNLAFALSVLGFLIMHISLV+ANT
Sbjct: 180 TTLVTASLLPHFITFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAANT 239

Query: 241 TTIE 244
           TTIE
Sbjct: 240 TTIE 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638237|gb|ACU19432.1| unknown [Glycine max]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/244 (80%), Positives = 221/244 (90%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           M+RSGA MAWNVF+FCTALRGLGSIMIL+VLGVVGVTYYAVVLTN+GPAL+ GGLD++ +
Sbjct: 1   MYRSGAGMAWNVFRFCTALRGLGSIMILMVLGVVGVTYYAVVLTNFGPALFLGGLDTLIS 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
             VLILFHCLLVMLLW YF+VV  D G+VPPNW+PA DEERGE DPLN  E S  QSD  
Sbjct: 61  FVVLILFHCLLVMLLWCYFAVVFMDPGTVPPNWKPAADEERGEVDPLNGVELSNLQSDSA 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N R RYCRKC+Q KPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL+YTFLE
Sbjct: 121 NQRFRYCRKCSQPKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLVYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           T+LVT+SLLPHF ++FS+GEIPGTPGTLATTFL FVLNLAF+LSVLGFL++H+SLV++NT
Sbjct: 181 TTLVTISLLPHFKTYFSDGEIPGTPGTLATTFLTFVLNLAFSLSVLGFLVLHVSLVASNT 240

Query: 241 TTIE 244
           TTIE
Sbjct: 241 TTIE 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453943|ref|XP_002279896.1| PREDICTED: probable S-acyltransferase At3g60800 [Vitis vinifera] gi|147867112|emb|CAN80505.1| hypothetical protein VITISV_010744 [Vitis vinifera]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/244 (86%), Positives = 226/244 (92%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLT+YGPALYDGGL SV A
Sbjct: 1   MHRSGAVMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           VAVLILFH LLVMLLWSYFSVVLTD G VPPNWRP +DEERGE DPL  S+F  + +D  
Sbjct: 61  VAVLILFHGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERGEGDPLTGSDFGVSPADAS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
             R+RYCRKC+Q+KPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 KQRVRYCRKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANT 240
           TSLVTLSLLPHFI+FF+EGEIPG+PGTLATTFLAFVLNLAFALSV+GFLIMHIS+V+ANT
Sbjct: 181 TSLVTLSLLPHFIAFFTEGEIPGSPGTLATTFLAFVLNLAFALSVMGFLIMHISMVAANT 240

Query: 241 TTIE 244
           TTIE
Sbjct: 241 TTIE 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089167|emb|CBI38870.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/237 (86%), Positives = 220/237 (92%)

Query: 8   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF 67
           MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLT+YGPALYDGGL SV AVAVLILF
Sbjct: 1   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIAVAVLILF 60

Query: 68  HCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYC 127
           H LLVMLLWSYFSVVLTD G VPPNWRP +DEERGE DPL  S+F  + +D    R+RYC
Sbjct: 61  HGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERGEGDPLTGSDFGVSPADASKQRVRYC 120

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
           RKC+Q+KPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL YTFLETSLVTLS
Sbjct: 121 RKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETSLVTLS 180

Query: 188 LLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIE 244
           LLPHFI+FF+EGEIPG+PGTLATTFLAFVLNLAFALSV+GFLIMHIS+V+ANTTTIE
Sbjct: 181 LLPHFIAFFTEGEIPGSPGTLATTFLAFVLNLAFALSVMGFLIMHISMVAANTTTIE 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820932|ref|XP_002878349.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297324187|gb|EFH54608.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/245 (83%), Positives = 222/245 (90%), Gaps = 1/245 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ EF G Q+D  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLEFVGLQADSS 120

Query: 121 -NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL 179
            NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFL
Sbjct: 121 SNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFL 180

Query: 180 ETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSAN 239
           ET+LVT+ L+PHFI+FFS+ EIPGTPGTLATTFLAFVLNLAFALSV+GFLIMHISLV+ N
Sbjct: 181 ETTLVTMVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAGN 240

Query: 240 TTTIE 244
           TTTIE
Sbjct: 241 TTTIE 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331887|ref|NP_191639.2| putative S-acyltransferase [Arabidopsis thaliana] gi|75248492|sp|Q8VYP5.1|ZDH14_ARATH RecName: Full=Probable S-acyltransferase At3g60800; AltName: Full=Probable palmitoyltransferase At3g60800; AltName: Full=Zinc finger DHHC domain-containing protein At3g60800 gi|17979303|gb|AAL49877.1| unknown protein [Arabidopsis thaliana] gi|20466005|gb|AAM20224.1| unknown protein [Arabidopsis thaliana] gi|110738424|dbj|BAF01138.1| hypothetical protein [Arabidopsis thaliana] gi|332646588|gb|AEE80109.1| putative S-acyltransferase [Arabidopsis thaliana]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/246 (83%), Positives = 222/246 (90%), Gaps = 2/246 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query: 121 --NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTF 178
             NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTF
Sbjct: 121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query: 179 LETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSA 238
           LET+LVTL L+PHFI+FFS+ EIPGTPGTLATTFLAFVLNLAFALSV+GFLIMHISLV+ 
Sbjct: 181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAG 240

Query: 239 NTTTIE 244
           NTTTIE
Sbjct: 241 NTTTIE 246

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
TAIR|locus:2101806	307	AT3G60800 "AT3G60800" [Arabido	0.991	0.794	0.634	1.3e-82
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.703	0.533	0.531	6.9e-61
TAIR|locus:2134643	291	AT4G00840 [Arabidopsis thalian	0.922	0.780	0.414	2.2e-43
GENEDB_PFALCIPARUM|PFF0485c	284	PFF0485c "zinc finger, putativ	0.166	0.144	0.658	4.4e-23
UNIPROTKB|C6KSU5	284	PFF0485c "Zinc finger protein,	0.166	0.144	0.658	4.4e-23
TAIR|locus:2083504	286	AT3G09320 [Arabidopsis thalian	0.402	0.346	0.422	1.8e-22
UNIPROTKB|F1NVH3	373	F1NVH3 "Uncharacterized protei	0.743	0.490	0.317	1.5e-21
UNIPROTKB|I3LAG5	263	ZDHHC2 "Uncharacterized protei	0.764	0.714	0.32	3e-21
UNIPROTKB|F1MPF2	364	ZDHHC2 "Uncharacterized protei	0.739	0.5	0.324	3.9e-21
UNIPROTKB|G3MXF3	367	ZDHHC2 "Uncharacterized protei	0.739	0.495	0.324	3.9e-21

TAIR|locus:2101806 AT3G60800 "AT3G60800" [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 156/246 (63%), Positives = 171/246 (69%)

Query:     1 MHRSGAAMAWNVFKFCTALRGLGSIMIXXXXXXXXXXXXXXXXXNYGPALYDGGLDSVTA 60
             MHRSG  MAWNVFKFCTALRGLGSIMI                 NYGPAL  GGLDS+ A
Sbjct:     1 MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
             + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct:    61 LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query:   121 --NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXX 178
               NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGA              
Sbjct:   121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query:   179 XETSLVTLSLLPHFISFFSEGEIPGTPGXXXXXXXXXXXXXXXXXXXXGFLIMHISLVSA 238
              ET+LVTL L+PHFI+FFS+ EIPGTPG                    GFLIMHISLV+ 
Sbjct:   181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAG 240

Query:   239 NTTTIE 244
             NTTTIE
Sbjct:   241 NTTTIE 246

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 94/177 (53%), Positives = 109/177 (61%)

Query:    70 LLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRK 129
             +L+MLLWSYFSVV+TD G VP  WRP LD E+ E +     E S   S   +  +RYCRK
Sbjct:    85 ILIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVGDSS--SHGVRYCRK 142

Query:   130 CNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXXXETSLVTLSLL 189
             CNQ KPPR HHCSVCGRCILKMDHHCVWVVNCVGA               ET++V +SLL
Sbjct:   143 CNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLL 202

Query:   190 PHFISFFSEGE--IPGTPGXXXXXXXXXXXXXXXXXXXXGFLIMHISLVSANTTTIE 244
             P F+ FFS+G+  I  +PG                    GFLIMHI LV+ NTTTIE
Sbjct:   203 PIFLVFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLIMHIMLVARNTTTIE 259

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2134643 AT4G00840 [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 99/239 (41%), Positives = 128/239 (53%)

Query:    11 NVFKFCTALRGLGSIMIXXXXXXXXXXXXXXXXXNYGPALYDGGLDSVTAVAVLILF--H 68
             N+F+FC+ L+ LG  MI                  + P L  G   +++A+A LI+F  H
Sbjct:     2 NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query:    69 CLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDP-LNPRIRYC 127
              LL+MLLWSYF+ V TD GSVP ++R     E G  D L A    G  +D      + YC
Sbjct:    62 FLLIMLLWSYFTTVFTDPGSVPEHFR----REMGGGDSLEA----GTSTDQGAFGSLGYC 113

Query:   128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXXXETSLVTLS 187
              KC  +KPPRCHHCSVC RC+LKMDHHCVW+VNCVGA               ET L  + 
Sbjct:   114 TKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIV 173

Query:   188 LLPHFISFFSEG-EIPGTPGXXXXXXXXXXXXXXXXXXXXGFLIMHISLVSANTTTIEV 245
             LLP FI FFS+  +   +PG                     F++MHISL+S+NTT++EV
Sbjct:   174 LLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSSNTTSVEV 232

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GENEDB_PFALCIPARUM|PFF0485c PFF0485c "zinc finger, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 177 (67.4 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query:   123 RIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVG 163
             R RYC+ CN  KP R HHCS C RC+L MDHHC W+ NCVG
Sbjct:    96 RRRYCKICNVWKPDRTHHCSACNRCVLNMDHHCPWINNCVG 136

GO:0016021 "integral to membrane" evidence=ISS

GO:0003676 "nucleic acid binding" evidence=ISS

UNIPROTKB|C6KSU5 PFF0485c "Zinc finger protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 177 (67.4 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
 Identities = 27/41 (65%), Positives = 30/41 (73%)

Query:   123 RIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVG 163
             R RYC+ CN  KP R HHCS C RC+L MDHHC W+ NCVG
Sbjct:    96 RRRYCKICNVWKPDRTHHCSACNRCVLNMDHHCPWINNCVG 136

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

TAIR|locus:2083504 AT3G09320 [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 46/109 (42%), Positives = 63/109 (57%)

Query:    55 LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSG 114
             L S   +A    F  L +M +++Y   V  D G VP N+ P  D E  E+ P++  +  G
Sbjct:    37 LTSSPGIANAAAFTALALMCIYNYSIAVFRDPGRVPLNYMP--DVEDPES-PVHEIKRKG 93

Query:   115 AQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVG 163
                      +RYC+KC+  KPPR HHC VC RC+L+MDHHC+W+ NCVG
Sbjct:    94 GD-------LRYCQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVG 135

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NVH3 F1NVH3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 62/195 (31%), Positives = 88/195 (45%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPAL-DEERGEADPLNASE---FSGAQ 116
             V  L+ +H   ++ +WSY+  + T   +    +  +  D+E  E +P   S+      A 
Sbjct:    60 VVCLVAYHIFFMLFVWSYWKTIFTLPMNPSKEFHLSYSDKESLEREPRGESQQEVLRRAA 119

Query:   117 SD-PLNPR-----IRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
              D P+  R     IRYC +C+ +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   120 KDLPIYTRTMSGAIRYCDRCHLVKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 179

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGXXXXXXXXXXXXXXXXXXXXGFLI 230
                          +  + L +FI F++ G +P T                       F  
Sbjct:   180 LLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAAMFSVSLSSLFGY 238

Query:   231 MHISLVSANTTTIEV 245
              H  LVS N +T+EV
Sbjct:   239 -HCWLVSKNKSTLEV 252

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

UNIPROTKB|I3LAG5 ZDHHC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 64/200 (32%), Positives = 90/200 (45%)

Query:    55 LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--D 105
             L+    V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  +
Sbjct:    10 LEKGILVVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQE 69

Query:   106 PLN-ASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGA 164
              L  A++     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG 
Sbjct:    70 VLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGF 129

Query:   165 XXXXXXXXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGXXXXXXXXXXXXXXXXXX 224
                                +  + L +FI F++ G +P T                    
Sbjct:   130 SNYKFFLLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAAMFSVSL 188

Query:   225 XXGFLIMHISLVSANTTTIE 244
                F   H  LVS N +T+E
Sbjct:   189 SSLFGY-HCWLVSKNKSTLE 207

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MPF2 ZDHHC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 63/194 (32%), Positives = 88/194 (45%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    50 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 109

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   110 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 169

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGXXXXXXXXXXXXXXXXXXXXGFLI 230
                          +  + L +FI F++ G +P T                       F  
Sbjct:   170 LLFLAYSLLYCVFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAAMFSVSLSSLFGY 228

Query:   231 MHISLVSANTTTIE 244
              H  LVS N +T+E
Sbjct:   229 -HCWLVSKNKSTLE 241

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G3MXF3 ZDHHC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 63/194 (32%), Positives = 88/194 (45%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    53 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 112

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   113 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 172

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGXXXXXXXXXXXXXXXXXXXXGFLI 230
                          +  + L +FI F++ G +P T                       F  
Sbjct:   173 LLFLAYSLLYCVFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAAMFSVSLSSLFGY 231

Query:   231 MHISLVSANTTTIE 244
              H  LVS N +T+E
Sbjct:   232 -HCWLVSKNKSTLE 244

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYP5	ZDH14_ARATH	2, ., 3, ., 1, ., -	0.8373	0.9918	0.7947	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	246
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	3e-46
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	3e-35

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  151 bits (383), Expect = 3e-46
 Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 10/171 (5%)

Query: 75  LWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLK 134
           LWSYF  + TD G VP N                      ++       +++C  CN +K
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEK---------EQEKQPDEESEEGDEEDELKFCSTCNIIK 51

Query: 135 PPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFIS 194
           PPR HHC VC RC+L+ DHHC W+ NC+G  N+KYFLLFLLY  L   L+ +    + + 
Sbjct: 52  PPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVY 111

Query: 195 FF-SEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIE 244
              +         +L ++ +  VL+L F L +   L  H+ L+  N TT E
Sbjct: 112 LIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYE 162

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  127 bits (320), Expect = 3e-35
 Identities = 68/222 (30%), Positives = 95/222 (42%), Gaps = 25/222 (11%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I + L+  +V  T   +V +                V  +ILF  +LV+  +SY  ++++
Sbjct: 32  IGLFLLSRIVVYTLLVIVKSL------------SLVVLFIILFIVILVLASFSYLLLLVS 79

Query: 85  DAGSVPPNWRPALDEERGEADPLNASEFSGAQ-SDPLNPRIRYCRKCNQLKPPRCHHCSV 143
           D G +  N                  E       D       +C  CN  KPPR HHCS+
Sbjct: 80  DPGYLGEN-----------ITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSI 128

Query: 144 CGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPG 203
           C RC+LK DHHC W+ NCVG  NY++F  FLLYT L   +V LS   +    FS      
Sbjct: 129 CNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTS 188

Query: 204 TPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV 245
                   F   +L + F +     L+  I L+  N TTIE 
Sbjct: 189 -LAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEF 229

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	246
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.97
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.93
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	95.02
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	93.07
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	89.32
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	89.31
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	85.82
PF13248	26	zf-ribbon_3: zinc-ribbon domain	84.93
PTZ00303	1374	phosphatidylinositol kinase; Provisional	80.99

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.5e-52  Score=364.37  Aligned_cols=218  Identities=41%  Similarity=0.755  Sum_probs=174.8

Q ss_pred             hhhHHHHHhhhhheeeeeeeeecccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCchhhhcc
Q 025922           24 SIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGE  103 (246)
Q Consensus        24 ~~~~~~v~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~vp~~~~~~~~~~~~~  103 (246)
                      +++++++.++++|.||++++..+.+.+..+    ......+++++.++++.+|+|++++++|||.+|..+.++.++++..
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~----~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~   88 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSISLT----IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSL   88 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccc
Confidence            899999999999999999988887755332    3456777899999999999999999999999999988876655433


Q ss_pred             CCCCCccccCCCCCCCCCCCceeccccCcccCCCCccccccCcccccCCcccccccceeecCchHHHHHHHHHHHHHHHH
Q 025922          104 ADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSL  183 (246)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~  183 (246)
                      +..............+..+..|+|++|+.+|||||||||.|+|||+||||||||+|||||.+|||+|++|++|+.+.+.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~  168 (307)
T KOG1315|consen   89 ENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIY  168 (307)
T ss_pred             cccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHH
Confidence            32111111111223356788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCC
Q 025922          184 VTLSLLPHFISFFSEGEIPGTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEVL  246 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~l~~~~l~~~hl~li~~n~TT~E~l  246 (246)
                      .++.....+...+ ......++.....+.+.+++.+.+++.+.+|+++|++||++|+||+|..
T Consensus       169 ~lv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~  230 (307)
T KOG1315|consen  169 VLVTTLIGFTKYF-QGGAGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAY  230 (307)
T ss_pred             HHHHHHHHHHHHH-hccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhh
Confidence            8887777777766 2222233333444555566777888888889999999999999999963

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2e-43  Score=304.19  Aligned_cols=200  Identities=31%  Similarity=0.569  Sum_probs=145.0

Q ss_pred             cchhhhhHHHHHhhhhheeeeeeeeecccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCchh
Q 025922           20 RGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDE   99 (246)
Q Consensus        20 ~~~~~~~~~~v~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~vp~~~~~~~~~   99 (246)
                      .++|++..+.+..+++...-......|.|      .++..+....+.|.+...|.+++|+.+++++||++|++|+|...+
T Consensus        13 ~hwGpi~alsiit~i~~~~~~~n~lww~p------~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~   86 (414)
T KOG1314|consen   13 LHWGPITALSIITIITSTTGYMNSLWWFP------LSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPK   86 (414)
T ss_pred             eccccHHHHHHHHHHHHHHHHhhhhhhcc------ccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCh
Confidence            44566655544444443332222234555      345556666777777888999999999999999999999985322


Q ss_pred             hhccCCCCCccccCCCCCCCCCCCceeccccCcccCCCCccccccCcccccCCcccccccceeecCchHHHHHHHHHHHH
Q 025922          100 ERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i  179 (246)
                                          ++.-.+||.+|+.+||||||||+.|||||.||||||||+|||||..||.+|..||++..+
T Consensus        87 --------------------D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~iv  146 (414)
T KOG1314|consen   87 --------------------DEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIV  146 (414)
T ss_pred             --------------------hHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHH
Confidence                                123469999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH----HHHHHh----cCCCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC
Q 025922          180 ETSLVTLSLLP----HFISFF----SEGEIPG---TPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV  245 (246)
Q Consensus       180 ~~~~~~~~~~~----~~~~~~----~~~~~~~---~~~~~~~~~~~~vl~~~~~l~~~~l~~~hl~li~~n~TT~E~  245 (246)
                      +|+-.++.+..    .+...+    ....++.   .+.++..+++++.+++...+.++.|++.|+..|.+|+|.||+
T Consensus       147 G~ih~tiI~~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~  223 (414)
T KOG1314|consen  147 GCIHGTIILVCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIES  223 (414)
T ss_pred             hcccceeeehhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHH
Confidence            88764432221    122212    2222222   223344445555566666777888999999999999999996

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=7.4e-43  Score=284.66  Aligned_cols=169  Identities=32%  Similarity=0.627  Sum_probs=121.7

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCCCceeccccCcccCCCCccccccCcccccCCccc
Q 025922           76 WSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHC  155 (246)
Q Consensus        76 ~~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhC  155 (246)
                      ++|++++++|||++|+......+.+ .+ .............++..++.++|.+|+..||+|||||+.||+||+|+||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC   79 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQ-EE-KEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHC   79 (174)
T ss_pred             EEehhhheECCcccCCccccccccc-cc-cccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccc
Confidence            4688999999999997622111111 11 111111111122335678899999999999999999999999999999999


Q ss_pred             ccccceeecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025922          156 VWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTP-GTLATTFLAFVLNLAFALSVLGFLIMHIS  234 (246)
Q Consensus       156 pwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~~~~~l~~~~l~~~hl~  234 (246)
                      ||+|||||.+|||+|++|+++..+.+++..+..+..+............. ......++.+++++++++++++++++|++
T Consensus        80 ~w~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (174)
T PF01529_consen   80 PWLGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLY  159 (174)
T ss_pred             hhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988776665555543332111111 11111134445667788888899999999


Q ss_pred             HHhcCcccccCC
Q 025922          235 LVSANTTTIEVL  246 (246)
Q Consensus       235 li~~n~TT~E~l  246 (246)
                      ++++|+||+|.+
T Consensus       160 ~i~~n~Tt~E~~  171 (174)
T PF01529_consen  160 LILRNITTYERI  171 (174)
T ss_pred             HHHcCCcHHHHH
Confidence            999999999964

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=4.4e-41  Score=296.67  Aligned_cols=157  Identities=32%  Similarity=0.639  Sum_probs=114.5

Q ss_pred             cCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCCCceeccccCcccCCCCccccccCcccccCCcccccccceee
Q 025922           84 TDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVG  163 (246)
Q Consensus        84 ~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG  163 (246)
                      +|||.+|++..+..+.  .++.+..    .....++...+.+||.+|+.+||||||||+.||+||+||||||||+|||||
T Consensus        79 sdpg~~p~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG  152 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIED--PERAPLY----KNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIG  152 (299)
T ss_pred             CCCceecCcccCCCCC--ccccccC----CCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceEC
Confidence            5999999863111111  1111111    111233556789999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 025922          164 ALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGE--IP--GTPGTLATTFLAFVLNLAFALSVLGFLIMHISLVSAN  239 (246)
Q Consensus       164 ~~N~r~F~~fl~~~~i~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~vl~~~~~l~~~~l~~~hl~li~~n  239 (246)
                      ++|||+|+.|++++.+++++..+.....+.....+..  ..  ..+......++..++++.+...+++|+.+|++++.+|
T Consensus       153 ~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~  232 (299)
T KOG1311|consen  153 ERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSG  232 (299)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecC
Confidence            9999999999999999999988776655554332211  11  2222223333444667777778888999999999999


Q ss_pred             cccccCC
Q 025922          240 TTTIEVL  246 (246)
Q Consensus       240 ~TT~E~l  246 (246)
                      +||+|.+
T Consensus       233 ~Tt~e~~  239 (299)
T KOG1311|consen  233 STTYESI  239 (299)
T ss_pred             cchhhhh
Confidence            9999974

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=1.6e-37  Score=273.28  Aligned_cols=168  Identities=36%  Similarity=0.632  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCCCceeccccCcccCCCCcccccc
Q 025922           65 ILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVC  144 (246)
Q Consensus        65 ~~~~~l~~~~~~~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C  144 (246)
                      +.+.+...+....|++..++|||+.+++.....-++..+          ....++..+..++|.+|+.+||+|||||+.|
T Consensus        60 i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~C  129 (309)
T COG5273          60 ILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETIS----------RLLDDGKFGTENFCSTCNIYKPPRSHHCSIC  129 (309)
T ss_pred             hhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhh----------hhhhcCccccceeccccccccCCCCccchhh
Confidence            344455667778899999999999986533322221111          1122355778999999999999999999999


Q ss_pred             CcccccCCcccccccceeecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhH-HHHHHH-HHHHHHHH
Q 025922          145 GRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTL-ATTFLA-FVLNLAFA  222 (246)
Q Consensus       145 ~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~vl~~~~~  222 (246)
                      |+||+||||||||+|||||.+|||+|++||+++......++......+....   +....+... ..++.+ ..+...+.
T Consensus       130 n~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~~~~~~~~f  206 (309)
T COG5273         130 NRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIF---SIRHDTSLAICFLIFGCSLLGVVFF  206 (309)
T ss_pred             cchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cccCChHHHHHHHHHhhhHHHHHHH
Confidence            9999999999999999999999999999999998877776665444333322   123333333 112221 23344455


Q ss_pred             HHHHHHHHHHHHHHhcCcccccC
Q 025922          223 LSVLGFLIMHISLVSANTTTIEV  245 (246)
Q Consensus       223 l~~~~l~~~hl~li~~n~TT~E~  245 (246)
                      +.+..++.+|.+++..|+||+|.
T Consensus       207 ~~~~~~~~~~~~~~~~~~t~~e~  229 (309)
T COG5273         207 IITTLLLLFLIYLILNNLTTIEF  229 (309)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHH
Confidence            66677889999999999999985

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=8.9e-36  Score=249.67  Aligned_cols=124  Identities=37%  Similarity=0.726  Sum_probs=95.5

Q ss_pred             CCceeccccCcccCCCCccccccCcccccCCcccccccceeecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Q 025922          122 PRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSE---  198 (246)
Q Consensus       122 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~~~~~~~~~~---  198 (246)
                      ....+|.+|.-+||||+||||.||+||+||||||||+|||||.+|||||++|++|+.+++.|+.+......+.....   
T Consensus       100 ~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~  179 (309)
T KOG1313|consen  100 ENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEE  179 (309)
T ss_pred             ccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhh
Confidence            34589999999999999999999999999999999999999999999999999999999999877655444432211   


Q ss_pred             -CCCCCC------chhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC
Q 025922          199 -GEIPGT------PGTLA---------TTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV  245 (246)
Q Consensus       199 -~~~~~~------~~~~~---------~~~~~~vl~~~~~l~~~~l~~~hl~li~~n~TT~E~  245 (246)
                       ...+++      |..+.         -+.-..+++..+.+.++.+..||.++|++|.|++|.
T Consensus       180 ~tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~  242 (309)
T KOG1313|consen  180 ITAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQ  242 (309)
T ss_pred             cccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHH
Confidence             111111      11110         111234555566777888999999999999999985

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.97  E-value=1.7e-30  Score=219.02  Aligned_cols=103  Identities=32%  Similarity=0.676  Sum_probs=77.8

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCCCceeccccCcccCCCCccccccCcccccCC
Q 025922           73 MLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMD  152 (246)
Q Consensus        73 ~~~~~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~D  152 (246)
                      +=..++..++.+|||.+.++..    .+..++-|.+.         ..-.....|+||++.||.||||||.|||||.|+|
T Consensus       110 vp~i~f~ltc~snpg~i~k~n~----s~~~~~ypYDy---------~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfD  176 (341)
T KOG1312|consen  110 VPLIFFTLTCGSNPGIITKANE----SLFLHVYPYDY---------VIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFD  176 (341)
T ss_pred             HHHHHHhhhhcCCCCccchhhh----ccceeccCccc---------eeecCCCccccccCCCccccccchHHHHHHHHhc
Confidence            3344567789999999974210    11111122211         1123347899999999999999999999999999


Q ss_pred             cccccccceeecCchHHHHHHHHHHHHHHHHHHHHH
Q 025922          153 HHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSL  188 (246)
Q Consensus       153 HhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~  188 (246)
                      |||.|+|||||.+|.|||++||++...++.+....+
T Consensus       177 HHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrl  212 (341)
T KOG1312|consen  177 HHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRL  212 (341)
T ss_pred             cceEeeecccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999977777765543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.93  E-value=2.4e-26  Score=212.08  Aligned_cols=101  Identities=32%  Similarity=0.578  Sum_probs=75.7

Q ss_pred             HHHHHhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCCCc-eeccccCcccCCCCccccccCcccccCCccc
Q 025922           77 SYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRI-RYCRKCNQLKPPRCHHCSVCGRCILKMDHHC  155 (246)
Q Consensus        77 ~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhC  155 (246)
                      .+.+...+|||.+|.+....  .+...+-          .+.++.+.. +||.+|.+.||.|||||+.|||||.||||||
T Consensus       384 ~f~~~~rsDPg~i~~~~~~~--~~tIs~l----------~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhC  451 (600)
T KOG0509|consen  384 TFGLFLRSDPGFIPTSTEVG--RETISQL----------IDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHC  451 (600)
T ss_pred             HHHHHhccCCCCCCCchhhH--HHHHHHh----------hccccccccccceeeeeeecCCccchhhhhHHHHhccccCC
Confidence            44556669999998642211  1111111          111233344 7999999999999999999999999999999


Q ss_pred             ccccceeecCchHHHHHHHHHHHHHHHHHHHHHH
Q 025922          156 VWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLL  189 (246)
Q Consensus       156 pwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~  189 (246)
                      ||++||||.+|||+|+.|++.+...+.+..+...
T Consensus       452 Pwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~  485 (600)
T KOG0509|consen  452 PWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCL  485 (600)
T ss_pred             CccccccCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988777766655443

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.02  E-value=0.68  Score=37.03  Aligned_cols=62  Identities=32%  Similarity=0.514  Sum_probs=47.2

Q ss_pred             CCCCCceeccccCcccCCCCccccccCcccccCCcccccccceeecCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025922          119 PLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPH  191 (246)
Q Consensus       119 ~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~~~  191 (246)
                      ....+.+.|..|+.--..+-|||.--|.||-+--|           +.+-.|+++..-..+...+.....+..
T Consensus        57 ~kp~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~~~~~~~~~  118 (174)
T PF01529_consen   57 IKPPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFILSLYYLVR  118 (174)
T ss_pred             cCCCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34677899999999999999999999999998777           456678777766666666654443333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=93.07  E-value=0.58  Score=41.26  Aligned_cols=58  Identities=24%  Similarity=0.393  Sum_probs=42.8

Q ss_pred             CCccccccCcccccCCcccccccceeecCch-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025922          137 RCHHCSVCGRCILKMDHHCVWVVNCVGALNY-----------KYFLLFLLYTFLETSLVTLSLLPHFIS  194 (246)
Q Consensus       137 Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~-----------r~F~~fl~~~~i~~~~~~~~~~~~~~~  194 (246)
                      +.++|+.|+..+...-|||+.-|+||-+.-|           |.+-.|+.++....+...+........
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~  180 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYE  180 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999999987655           778899977663333333333333333

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=89.32  E-value=0.21  Score=26.65  Aligned_cols=21  Identities=29%  Similarity=0.842  Sum_probs=17.9

Q ss_pred             eccccCcccCCCCccccccCc
Q 025922          126 YCRKCNQLKPPRCHHCSVCGR  146 (246)
Q Consensus       126 ~C~~C~~~kP~Rs~HC~~C~~  146 (246)
                      +|..|...-++.+..|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            588898888888999998875

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=89.31  E-value=0.22  Score=31.42  Aligned_cols=24  Identities=33%  Similarity=0.838  Sum_probs=22.0

Q ss_pred             CceeccccCcccCCCCccccccCc
Q 025922          123 RIRYCRKCNQLKPPRCHHCSVCGR  146 (246)
Q Consensus       123 ~~~~C~~C~~~kP~Rs~HC~~C~~  146 (246)
                      ....|.+|...-|+|+..|+.||.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            468999999999999999999886

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=85.82  E-value=15  Score=32.74  Aligned_cols=116  Identities=20%  Similarity=0.233  Sum_probs=68.0

Q ss_pred             CCCCCceeccccCcccCCCCccccccCcccccCCcccccccceeecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 025922          119 PLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSE  198 (246)
Q Consensus       119 ~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~r~F~~fl~~~~i~~~~~~~~~~~~~~~~~~~  198 (246)
                      .+.++.+.|+.|+.=-...-|||.==|+||-+--|           +=.=.|++++....+..++............-.+
T Consensus       118 ~KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (309)
T COG5273         118 YKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHD  186 (309)
T ss_pred             ccCCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Confidence            34677899999999999999999999999998776           5566788877655555544433222222111111


Q ss_pred             CC------CCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC
Q 025922          199 GE------IPGTPGTLA--TTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEV  245 (246)
Q Consensus       199 ~~------~~~~~~~~~--~~~~~~vl~~~~~l~~~~l~~~hl~li~~n~TT~E~  245 (246)
                      ..      ....+....  .++....+......++......+.+.+.++.++-|.
T Consensus       187 ~~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  241 (309)
T COG5273         187 TSLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEF  241 (309)
T ss_pred             hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccc
Confidence            00      000111111  111111112223444556777888999999988764

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=84.93  E-value=0.49  Score=25.86  Aligned_cols=22  Identities=27%  Similarity=0.854  Sum_probs=18.4

Q ss_pred             eeccccCcccCCCCccccccCc
Q 025922          125 RYCRKCNQLKPPRCHHCSVCGR  146 (246)
Q Consensus       125 ~~C~~C~~~kP~Rs~HC~~C~~  146 (246)
                      ++|..|...-++.++.|+.||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6788898877888888888875

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=80.99  E-value=0.95  Score=44.70  Aligned_cols=23  Identities=35%  Similarity=0.816  Sum_probs=18.8

Q ss_pred             ceeccccCcccC-------CCCccccccCc
Q 025922          124 IRYCRKCNQLKP-------PRCHHCSVCGR  146 (246)
Q Consensus       124 ~~~C~~C~~~kP-------~Rs~HC~~C~~  146 (246)
                      ...|..|+..-.       -|.||||.||+
T Consensus       460 SdtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        460 SDSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CCcccCcCCcccccccccccccccccCCcc
Confidence            368999997663       39999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	246
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 33/169 (19%), Positives = 48/169 (28%), Gaps = 47/169 (27%)

Query: 68  HCLLVML------LWSYFSV---VL--------TDAGSVPPNWRPALDEERGEADPLNAS 110
           +CLLV+L       W+ F++   +L        TD  S       +LD        L   
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS---MTLTPD 301

Query: 111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCH----HCSVCGRCILKMDHHCVWVVNCVGALN 166
           E        L+       +   L            S+        D    W        N
Sbjct: 302 EVKSLLLKYLD------CRPQDLPREVLTTNPRRLSIIAE--SIRDGLATWD-------N 346

Query: 167 YKYFLLFLLYTFLETSLVTLS---LLPHFISF--FSEG-EIPGTPGTLA 209
           +K+     L T +E+SL  L        F     F     IP     L+
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLS 393

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	246
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	85.31
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	84.69

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=85.31  E-value=0.66  Score=29.42  Aligned_cols=30  Identities=33%  Similarity=0.670  Sum_probs=25.1

Q ss_pred             CCCceeccccCcccCCCCccccccCccccc
Q 025922          121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILK  150 (246)
Q Consensus       121 ~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~  150 (246)
                      ......|.+|...-|+|+..|+.||.--+|
T Consensus        16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           16 VFLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             HhchhhhccccCcCCcccccccCCCCCCCC
Confidence            445789999999999999999999865443

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=84.69  E-value=0.46  Score=29.67  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=24.7

Q ss_pred             CCceeccccCcccCCCCccccccCccccc
Q 025922          122 PRIRYCRKCNQLKPPRCHHCSVCGRCILK  150 (246)
Q Consensus       122 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~  150 (246)
                      ...+.|..|...-|+++..|+.||.--++
T Consensus        12 ~~k~iCpkC~a~~~~gaw~CrKCG~~~lr   40 (51)
T 3j21_g           12 FKKYVCLRCGATNPWGAKKCRKCGYKRLR   40 (51)
T ss_dssp             SSEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred             hCCccCCCCCCcCCCCceecCCCCCcccc
Confidence            45689999999999999999999875443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	246
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	90.84

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=90.84  E-value=0.12  Score=31.19  Aligned_cols=26  Identities=35%  Similarity=0.729  Sum_probs=23.0

Q ss_pred             CCCceeccccCcccCCCCccccccCc
Q 025922          121 NPRIRYCRKCNQLKPPRCHHCSVCGR  146 (246)
Q Consensus       121 ~~~~~~C~~C~~~kP~Rs~HC~~C~~  146 (246)
                      ......|.+|...-|+|+..|+.||.
T Consensus        16 ~~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          16 VFLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhhHHHhhccccCCccccccccCCC
Confidence            45679999999999999999998875