Citrus Sinensis ID: 025960

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Secondary Structure (PSIPRED)
cccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEcccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccccccccccccEEEccccEEEEEccccEEcccccccccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTnygpalydggldSVTAVAVLILFHCLLVMLLWSYFSVVLtdagsvppnwrpaldeergeadplnasefsgaqsdplnprirycrkcnqlkpprchhcsvcgrcilkmdhhcVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFisffsegeipgtpgtlATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Flexible Loop (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPlnasefsgaqsdplnpRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Low Complexity Region (SEG)
MHRSGAAMAWNVFKFCTALRGLGSIMIllvlgvvgvtyyavvltNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAlnykyfllfllytflETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Disordered region (IsUnstruct)
******AMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSV*********************************RIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLL**
Disordered Region (DISOPRED)
********AWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRP*************************NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLL**
Disordered Region (DISEMBL)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Disordered Region (DISPRO)
******AMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW********GEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSL***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q8VYP5	307	Probable S-acyltransferas	yes	no	0.877	0.700	0.829	3e-98
Q94C49	302	Probable S-acyltransferas	no	no	0.840	0.682	0.671	6e-66
Q5M757	291	Probable S-acyltransferas	no	no	0.804	0.676	0.555	3e-50
Q5Y5T1	380	Probable palmitoyltransfe	yes	no	0.755	0.486	0.358	4e-29
Q9UIJ5	367	Palmitoyltransferase ZDHH	yes	no	0.775	0.517	0.356	5e-28
P59267	366	Palmitoyltransferase ZDHH	no	no	0.738	0.494	0.353	5e-27
Q9JKR5	366	Palmitoyltransferase ZDHH	no	no	0.738	0.494	0.353	5e-27
Q5FWL7	338	Palmitoyltransferase ZDHH	N/A	no	0.636	0.461	0.373	4e-25
Q96MV8	337	Palmitoyltransferase ZDHH	no	no	0.644	0.468	0.364	1e-24
Q8BGJ0	337	Palmitoyltransferase ZDHH	no	no	0.644	0.468	0.369	2e-24

>sp|Q8VYP5|ZDH14_ARATH Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1

 Score =  357 bits (917), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 194/217 (89%), Gaps = 2/217 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSD-- 118
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query: 119 PLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTF 178
             NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTF
Sbjct: 121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query: 179 LETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           LET+LVTL L+PHFI+FFS+ EIPGTPGTLATTFLAF
Sbjct: 181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAF 217

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q94C49|ZDH18_ARATH Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1

 Score =  250 bits (639), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/210 (67%), Positives = 165/210 (78%), Gaps = 4/210 (1%)

Query: 8   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF 67
           MAWNVFKFCTALR LGSIMIL+V+G++G TYYAVV+ NYGPAL  GG+DS+ +V VL  F
Sbjct: 1   MAWNVFKFCTALRALGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVLVLAFF 60

Query: 68  HCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYC 127
           H LL+MLLWSYFSVV+TD G VP  WRP LD E+ E +     E S   S   +  +RYC
Sbjct: 61  HFLLIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVGDSS--SHGVRYC 118

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
           RKCNQ KPPR HHCSVCGRCILKMDHHCVWVVNCVGA NYK FLLFL YTFLET++V +S
Sbjct: 119 RKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVS 178

Query: 188 LLPHFISFFS--EGEIPGTPGTLATTFLAF 215
           LLP F+ FFS  +G+I  +PG+LA +F+AF
Sbjct: 179 LLPIFLVFFSDGDGDITVSPGSLAASFVAF 208

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5M757|ZDH15_ARATH Probable S-acyltransferase At4g00840 OS=Arabidopsis thaliana GN=At4g00840 PE=2 SV=1

 Score =  198 bits (503), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/209 (55%), Positives = 145/209 (69%), Gaps = 12/209 (5%)

Query: 11  NVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF--H 68
           N+F+FC+ L+ LG  MILLV+ VVGV+YYAVV++ + P L  G   +++A+A LI+F  H
Sbjct: 2   NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query: 69  CLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDP-LNPRIRYC 127
            LL+MLLWSYF+ V TD GSVP ++R     E G  D L A    G  +D      + YC
Sbjct: 62  FLLIMLLWSYFTTVFTDPGSVPEHFR----REMGGGDSLEA----GTSTDQGAFGSLGYC 113

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
            KC  +KPPRCHHCSVC RC+LKMDHHCVW+VNCVGA NYK+FLLFL YTFLET L  + 
Sbjct: 114 TKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIV 173

Query: 188 LLPHFISFFSEG-EIPGTPGTLATTFLAF 215
           LLP FI FFS+  +   +PG LA+  LAF
Sbjct: 174 LLPSFIEFFSQAIKHSSSPGKLASLVLAF 202

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T1|ZDH20_MOUSE Probable palmitoyltransferase ZDHHC20 OS=Mus musculus GN=Zdhhc20 PE=2 SV=1

 Score =  128 bits (321), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 10  WNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHC 69
           W +++ C   R +G + +L +  VV  +YYA V+      +   G    T V  L+ FH 
Sbjct: 4   WTLWRCCQ--RVVGWVPVLFITFVVVWSYYAYVVELCVSTISRTGEKGKTVV-YLVAFHL 60

Query: 70  LLVMLLWSYFSVVLTD----------AGSVPPNWRPALDEERGEADPLNASEFSGAQSDP 119
             VM +WSY+  + T           + S    +     +ER +     A+      +  
Sbjct: 61  FFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQDILRRAARDLPIYTTS 120

Query: 120 LNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL 179
            +  IRYC KC  +KP R HHCS C RC+LKMDHHC WV NCVG  NYK+F+LFLLY+ L
Sbjct: 121 ASKAIRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLL 180

Query: 180 ETSLVTLSLLPHFISFFS 197
               V  ++L +FI F++
Sbjct: 181 YCLFVAATVLEYFIKFWT 198

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UIJ5|ZDHC2_HUMAN Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=2 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 105/213 (49%), Gaps = 23/213 (10%)

Query: 20  RGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYF 79
           R L  I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+
Sbjct: 16  RVLYWIPVVFITLLLGWSYYAYAIQLCIVSMENTG----EQVVCLMAYHLLFAMFVWSYW 71

Query: 80  SVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSD---------PLNPR-----IR 125
             + T    +P N          E D L       A  +         P+  R     IR
Sbjct: 72  KTIFT----LPMNPSKEFHLSYAEKDLLEREPRGEAHQEVLRRAAKDLPIYTRTMSGAIR 127

Query: 126 YCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVT 185
           YC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    + 
Sbjct: 128 YCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIA 187

Query: 186 LSLLPHFISFFSEGEIPGTPGTLATTFLAFGMA 218
            + L +FI F++ G +P T       FL F  A
Sbjct: 188 ATDLQYFIKFWTNG-LPDTQAKFHIMFLFFAAA 219

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P59267|ZDHC2_MOUSE Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdhhc2 PE=2 SV=1

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 106/212 (50%), Gaps = 31/212 (14%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+  + T
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIG----EQVVCLMAYHLLFAMFVWSYWKTIFT 75

Query: 85  DAGSVPPNWRPALDEE-------RGEAD-----------PLNASEFSGAQSDPLNPRIRY 126
              +    +  +  E+       RGEA            P+     SGA        IRY
Sbjct: 76  LPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGA--------IRY 127

Query: 127 CRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTL 186
           C +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  
Sbjct: 128 CDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAA 187

Query: 187 SLLPHFISFFSEGEIPGTPGTLATTFLAFGMA 218
           + L +FI F++ G +P T       FL F  A
Sbjct: 188 TDLQYFIRFWTNG-LPDTQAKFHIMFLFFAAA 218

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9JKR5|ZDHC2_RAT Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus GN=Zdhhc2 PE=2 SV=1

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 106/212 (50%), Gaps = 31/212 (14%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I ++ +  ++G +YYA  +     ++ + G      V  L+ +H L  M +WSY+  + T
Sbjct: 20  IPVVFISLLLGWSYYAYAIQLCIVSMENIG----EQVVCLMAYHLLFAMFVWSYWKTIFT 75

Query: 85  DAGSVPPNWRPALDEE-------RGEAD-----------PLNASEFSGAQSDPLNPRIRY 126
              +    +  +  E+       RGEA            P+     SGA        IRY
Sbjct: 76  LPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAAKDLPIYTRTMSGA--------IRY 127

Query: 127 CRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTL 186
           C +C  +KP RCHHCSVC +CILKMDHHC WV NCVG  NYK+FLLFL Y+ L    +  
Sbjct: 128 CDRCRLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAA 187

Query: 187 SLLPHFISFFSEGEIPGTPGTLATTFLAFGMA 218
           + L +FI F++ G +P T       FL F  A
Sbjct: 188 TDLQYFIRFWTNG-LPDTQAKFHIMFLFFAAA 218

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5FWL7|ZDH15_XENLA Palmitoyltransferase ZDHHC15 OS=Xenopus laevis GN=zdhhc15 PE=2 SV=1

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 18/174 (10%)

Query: 41  VVLTNYGPALYDGGLDSVT----AVAVLILFHCLLVMLLWSYFSVVLTDAGS------VP 90
           VVL +Y   +++  L +VT      A L++FH + ++ +W+Y+  + T          +P
Sbjct: 31  VVLWSYYAYVWELCLVTVTNPAEKAAYLLIFHTVFLLFIWTYWKAIFTPPKQPTKKFLLP 90

Query: 91  PNWRPALD-EERGEADPLNASEFSGAQSDPLNPRI-----RYCRKCNQLKPPRCHHCSVC 144
              +   D EER EA     +EF  A+  P+  R      R+C  C  +KP RCHHCSVC
Sbjct: 91  YAEKERYDNEERPEAQKQIVAEF--ARKLPVYTRTGSGATRFCDTCQMVKPDRCHHCSVC 148

Query: 145 GRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSE 198
           G C+LKMDHHC WV NC+G  NYK+FLLFL Y  L    +  ++  +FI ++++
Sbjct: 149 GMCVLKMDHHCPWVNNCIGYSNYKFFLLFLAYAMLYCLYIGCTVFQYFILYWTD 202

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q96MV8|ZDH15_HUMAN Palmitoyltransferase ZDHHC15 OS=Homo sapiens GN=ZDHHC15 PE=2 SV=1

 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 15/173 (8%)

Query: 55  LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPAL---DEERGEADPLNASE 111
           L     V  LIL+H + V   W+Y+  + T      PN +  L   D+ER E +     +
Sbjct: 49  LSPAEKVIYLILYHAIFVFFTWTYWKSIFTLPQQ--PNQKFHLSYTDKERYENEERPEVQ 106

Query: 112 ----FSGAQSDPLNPR-----IRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCV 162
                  A+  P+  R     +R+C +C+ +KP RCHHCSVC  C+LKMDHHC WV NC+
Sbjct: 107 KQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCI 166

Query: 163 GALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           G  NYK+FL FL Y+ L    +  ++  +FI ++  GE+P         FL F
Sbjct: 167 GFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW-RGELPSVRSKFHVLFLLF 218

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BGJ0|ZDH15_MOUSE Palmitoyltransferase ZDHHC15 OS=Mus musculus GN=Zdhhc15 PE=1 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 15/173 (8%)

Query: 55  LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPAL---DEER--GEADPLNA 109
           L     V  LIL+H + V   W+Y+  + T      PN +  L   D+ER   E  P   
Sbjct: 49  LSPAEKVIYLILYHAIFVFFAWTYWKSIFTLPQQ--PNQKFHLSYTDKERYKNEERPEVQ 106

Query: 110 SEF--SGAQSDPLNPR-----IRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCV 162
            +     A+  P+  R     +R+C +C+ +KP RCHHCSVC  C+LKMDHHC WV NC+
Sbjct: 107 KQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCI 166

Query: 163 GALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           G  NYK+FL FL Y+ L    +  ++  +FI ++  GE+P         FL F
Sbjct: 167 GFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW-RGELPSVRSKFHVLFLLF 218

Palmitoyltransferase specific for GAP43 and DLG4/PSD95.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
255541300	307	zinc finger protein, putative [Ricinus c	0.877	0.700	0.902	1e-104
224129994	309	predicted protein [Populus trichocarpa]	0.877	0.695	0.897	1e-104
255638237	307	unknown [Glycine max]	0.877	0.700	0.804	1e-101
356506038	304	PREDICTED: probable S-acyltransferase At	0.873	0.703	0.874	1e-101
449432251	307	PREDICTED: probable S-acyltransferase At	0.877	0.700	0.883	1e-101
356496388	304	PREDICTED: probable S-acyltransferase At	0.873	0.703	0.869	1e-100
225453943	307	PREDICTED: probable S-acyltransferase At	0.877	0.700	0.865	1e-100
22331887	307	putative S-acyltransferase [Arabidopsis	0.877	0.700	0.829	2e-96
297820932	306	zinc finger family protein [Arabidopsis	0.877	0.702	0.828	2e-96
296089167	300	unnamed protein product [Vitis vinifera]	0.848	0.693	0.865	5e-96

>gi|255541300|ref|XP_002511714.1| zinc finger protein, putative [Ricinus communis] gi|223548894|gb|EEF50383.1| zinc finger protein, putative [Ricinus communis]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/215 (90%), Positives = 201/215 (93%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL DGG DS TA
Sbjct: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALQDGGFDSCTA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLI FHCLLVMLLWSYFSVVLTD G VPPNWRPA+DEERGEADPLN S+FSG  +D  
Sbjct: 61  LAVLIPFHCLLVMLLWSYFSVVLTDPGGVPPNWRPAIDEERGEADPLNGSDFSGVLTDSS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCNQ KPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 NQRIRYCRKCNQQKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           TSLVTLSLLPHFI+FFS+GEIPGTPGTLATTFLAF
Sbjct: 181 TSLVTLSLLPHFIAFFSDGEIPGTPGTLATTFLAF 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129994|ref|XP_002320722.1| predicted protein [Populus trichocarpa] gi|222861495|gb|EEE99037.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/215 (89%), Positives = 201/215 (93%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRS A MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVL NYGPALYDGG+DS+ +
Sbjct: 1   MHRSRAVMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLNNYGPALYDGGIDSLVS 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLI FH LLVMLLWSYFSVVLTD GSVPPNWRPA+DEERGEADPLN SEFSG QSD  
Sbjct: 61  LAVLIPFHSLLVMLLWSYFSVVLTDPGSVPPNWRPAIDEERGEADPLNGSEFSGVQSDQS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 NQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           TSLVTLSL PHFI+FFS+GEIPGTPGTLATTFLAF
Sbjct: 181 TSLVTLSLSPHFIAFFSDGEIPGTPGTLATTFLAF 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638237|gb|ACU19432.1| unknown [Glycine max]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/215 (80%), Positives = 192/215 (89%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           M+RSGA MAWNVF+FCTALRGLGSIMIL+VLGVVGVTYYAVVLTN+GPAL+ GGLD++ +
Sbjct: 1   MYRSGAGMAWNVFRFCTALRGLGSIMILMVLGVVGVTYYAVVLTNFGPALFLGGLDTLIS 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
             VLILFHCLLVMLLW YF+VV  D G+VPPNW+PA DEERGE DPLN  E S  QSD  
Sbjct: 61  FVVLILFHCLLVMLLWCYFAVVFMDPGTVPPNWKPAADEERGEVDPLNGVELSNLQSDSA 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N R RYCRKC+Q KPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL+YTFLE
Sbjct: 121 NQRFRYCRKCSQPKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLVYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           T+LVT+SLLPHF ++FS+GEIPGTPGTLATTFL F
Sbjct: 181 TTLVTISLLPHFKTYFSDGEIPGTPGTLATTFLTF 215

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506038|ref|XP_003521795.1| PREDICTED: probable S-acyltransferase At3g60800-like [Glycine max]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/215 (87%), Positives = 199/215 (92%), Gaps = 1/215 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVG TYYAVVLTNYGPALY GGLDS+ A
Sbjct: 1   MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGATYYAVVLTNYGPALYAGGLDSLVA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLILFH LLVMLLWSYFSVV TD GSVPPNW+P +DEERGEADPL  +EFS   SDP 
Sbjct: 61  LAVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPTIDEERGEADPLVGTEFSNLPSDP- 119

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           NPR+RYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 120 NPRVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 179

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           T+LVT SLLPHFI+FFS+GEIPGTPG+LATTFLAF
Sbjct: 180 TTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAF 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432251|ref|XP_004133913.1| PREDICTED: probable S-acyltransferase At3g60800-like [Cucumis sativus] gi|449526128|ref|XP_004170066.1| PREDICTED: probable S-acyltransferase At3g60800-like [Cucumis sativus]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/215 (88%), Positives = 197/215 (91%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG AMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDS+ A
Sbjct: 1   MHRSGPAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSLIA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
            AVLI FHCLLVMLLWSYFSVVLTD GSVPPNWRPA+DEER E DPLN  EFS    +  
Sbjct: 61  FAVLISFHCLLVMLLWSYFSVVLTDPGSVPPNWRPAVDEERAEGDPLNTMEFSILHPELS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N RIRYCRKCN LKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE
Sbjct: 121 NQRIRYCRKCNHLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           TS+VTLSLLPHFI+FFSEGEIPGTP TLATTF+AF
Sbjct: 181 TSVVTLSLLPHFIAFFSEGEIPGTPSTLATTFIAF 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496388|ref|XP_003517050.1| PREDICTED: probable S-acyltransferase At3g60800-like isoform 1 [Glycine max]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/215 (86%), Positives = 198/215 (92%), Gaps = 1/215 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALY GGLDS+ A
Sbjct: 1   MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYAGGLDSLVA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           +AVLILFH LLVMLLWSYFSVV TD GSVPPNW+P +DEERGEADPL  +EFS   SDP 
Sbjct: 61  LAVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWKPMIDEERGEADPLVGTEFSNVLSDP- 119

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
           N R+RYCRKCNQLKPPRCHHCSVCGRC+LKMDHHCVWVVNCVGALNYK FLLFL YTFLE
Sbjct: 120 NQRVRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKCFLLFLFYTFLE 179

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           T+LVT SLLPHFI+FFS+GEIPGTPG+LATTFLAF
Sbjct: 180 TTLVTASLLPHFITFFSDGEIPGTPGSLATTFLAF 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453943|ref|XP_002279896.1| PREDICTED: probable S-acyltransferase At3g60800 [Vitis vinifera] gi|147867112|emb|CAN80505.1| hypothetical protein VITISV_010744 [Vitis vinifera]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/215 (86%), Positives = 197/215 (91%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSGA MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLT+YGPALYDGGL SV A
Sbjct: 1   MHRSGAVMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
           VAVLILFH LLVMLLWSYFSVVLTD G VPPNWRP +DEERGE DPL  S+F  + +D  
Sbjct: 61  VAVLILFHGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERGEGDPLTGSDFGVSPADAS 120

Query: 121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLE 180
             R+RYCRKC+Q+KPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL YTFLE
Sbjct: 121 KQRVRYCRKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTFLE 180

Query: 181 TSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           TSLVTLSLLPHFI+FF+EGEIPG+PGTLATTFLAF
Sbjct: 181 TSLVTLSLLPHFIAFFTEGEIPGSPGTLATTFLAF 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331887|ref|NP_191639.2| putative S-acyltransferase [Arabidopsis thaliana] gi|75248492|sp|Q8VYP5.1|ZDH14_ARATH RecName: Full=Probable S-acyltransferase At3g60800; AltName: Full=Probable palmitoyltransferase At3g60800; AltName: Full=Zinc finger DHHC domain-containing protein At3g60800 gi|17979303|gb|AAL49877.1| unknown protein [Arabidopsis thaliana] gi|20466005|gb|AAM20224.1| unknown protein [Arabidopsis thaliana] gi|110738424|dbj|BAF01138.1| hypothetical protein [Arabidopsis thaliana] gi|332646588|gb|AEE80109.1| putative S-acyltransferase [Arabidopsis thaliana]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 194/217 (89%), Gaps = 2/217 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSD-- 118
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query: 119 PLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTF 178
             NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTF
Sbjct: 121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query: 179 LETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           LET+LVTL L+PHFI+FFS+ EIPGTPGTLATTFLAF
Sbjct: 181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAF 217

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820932|ref|XP_002878349.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297324187|gb|EFH54608.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/216 (82%), Positives = 194/216 (89%), Gaps = 1/216 (0%)

Query: 1   MHRSGAAMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTA 60
           MHRSG  MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPAL  GGLDS+ A
Sbjct: 1   MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query: 61  VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSD-P 119
           + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ EF G Q+D  
Sbjct: 61  LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLEFVGLQADSS 120

Query: 120 LNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFL 179
            NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGALNYKYFLLFL YTFL
Sbjct: 121 SNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFL 180

Query: 180 ETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAF 215
           ET+LVT+ L+PHFI+FFS+ EIPGTPGTLATTFLAF
Sbjct: 181 ETTLVTMVLMPHFIAFFSDEEIPGTPGTLATTFLAF 216

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089167|emb|CBI38870.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/208 (86%), Positives = 191/208 (91%)

Query: 8   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILF 67
           MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLT+YGPALYDGGL SV AVAVLILF
Sbjct: 1   MAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTSYGPALYDGGLTSVIAVAVLILF 60

Query: 68  HCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYC 127
           H LLVMLLWSYFSVVLTD G VPPNWRP +DEERGE DPL  S+F  + +D    R+RYC
Sbjct: 61  HGLLVMLLWSYFSVVLTDPGGVPPNWRPIMDEERGEGDPLTGSDFGVSPADASKQRVRYC 120

Query: 128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLS 187
           RKC+Q+KPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL YTFLETSLVTLS
Sbjct: 121 RKCSQMKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETSLVTLS 180

Query: 188 LLPHFISFFSEGEIPGTPGTLATTFLAF 215
           LLPHFI+FF+EGEIPG+PGTLATTFLAF
Sbjct: 181 LLPHFIAFFTEGEIPGSPGTLATTFLAF 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2101806	307	AT3G60800 "AT3G60800" [Arabido	0.971	0.775	0.634	1.1e-80
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.673	0.509	0.505	2e-57
TAIR|locus:2134643	291	AT4G00840 [Arabidopsis thalian	0.853	0.718	0.429	4.2e-40
UNIPROTKB|I3LAG5	263	ZDHHC2 "Uncharacterized protei	0.738	0.688	0.319	9e-22
UNIPROTKB|F1NVH3	373	F1NVH3 "Uncharacterized protei	0.714	0.469	0.313	1.1e-21
UNIPROTKB|F1P165	359	ZDHHC20 "Uncharacterized prote	0.665	0.454	0.350	1.1e-21
UNIPROTKB|F1MPF2	364	ZDHHC2 "Uncharacterized protei	0.714	0.480	0.324	1.1e-21
UNIPROTKB|G3MXF3	367	ZDHHC2 "Uncharacterized protei	0.714	0.476	0.324	1.1e-21
UNIPROTKB|F1PU04	327	ZDHHC2 "Uncharacterized protei	0.714	0.535	0.324	1.1e-21
UNIPROTKB|F1SET7	327	ZDHHC2 "Uncharacterized protei	0.714	0.535	0.324	1.1e-21

TAIR|locus:2101806 AT3G60800 "AT3G60800" [Arabidopsis thaliana (taxid:3702)]

 Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
 Identities = 153/241 (63%), Positives = 173/241 (71%)

Query:     1 MHRSGAAMAWNVFKFCTALRGLGSIMIXXXXXXXXXXXXXXXXXNYGPALYDGGLDSVTA 60
             MHRSG  MAWNVFKFCTALRGLGSIMI                 NYGPAL  GGLDS+ A
Sbjct:     1 MHRSGTTMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALSQGGLDSLAA 60

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPL 120
             + +LILFH LL MLLWSYFSVV TD G VPPNWRP+ DEERGE+DPLN+ +F G QSD  
Sbjct:    61 LTILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLNSLDFVGLQSDSS 120

Query:   121 --NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXX 178
               NPR+R+CRKCNQLKP RCHHCSVCGRC+LKMDHHCVWVVNCVGA              
Sbjct:   121 SSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTF 180

Query:   179 XETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVIN 238
              ET+LVTL L+PHFI+FFS+ EIPGTPGTLATTFLAF + +L +   +   L  H  ++ 
Sbjct:   181 LETTLVTLVLMPHFIAFFSDEEIPGTPGTLATTFLAF-VLNLAFALSVMGFLIMHISLVA 239

Query:   239 G 239
             G
Sbjct:   240 G 240

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 86/170 (50%), Positives = 110/170 (64%)

Query:    70 LLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRK 129
             +L+MLLWSYFSVV+TD G VP  WRP LD E+ E +     E S   S   +  +RYCRK
Sbjct:    85 ILIMLLWSYFSVVVTDPGGVPTGWRPELDIEKSEGNQALIGEASVGDSS--SHGVRYCRK 142

Query:   130 CNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXXXETSLVTLSLL 189
             CNQ KPPR HHCSVCGRCILKMDHHCVWVVNCVGA               ET++V +SLL
Sbjct:   143 CNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLL 202

Query:   190 PHFISFFSEGE--IPGTPGTLATTFLAFGMASLTYHSDLCNRLHQHFYVI 237
             P F+ FFS+G+  I  +PG+LA +F+AF + ++ +   +   L  H  ++
Sbjct:   203 PIFLVFFSDGDGDITVSPGSLAASFVAF-VLNIAFALSVLGFLIMHIMLV 251

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2134643 AT4G00840 [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 95/221 (42%), Positives = 120/221 (54%)

Query:    11 NVFKFCTALRGLGSIMIXXXXXXXXXXXXXXXXXNYGPALYDGGLDSVTAVAVLILF--H 68
             N+F+FC+ L+ LG  MI                  + P L  G   +++A+A LI+F  H
Sbjct:     2 NLFRFCSGLKVLGYFMILLVVAVVGVSYYAVVVSTWWPILIRGDHGALSALAALIIFVFH 61

Query:    69 CLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDP-LNPRIRYC 127
              LL+MLLWSYF+ V TD GSVP ++R     E G  D L A    G  +D      + YC
Sbjct:    62 FLLIMLLWSYFTTVFTDPGSVPEHFR----REMGGGDSLEA----GTSTDQGAFGSLGYC 113

Query:   128 RKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXXXXXXXXXXXETSLVTLS 187
              KC  +KPPRCHHCSVC RC+LKMDHHCVW+VNCVGA               ET L  + 
Sbjct:   114 TKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIV 173

Query:   188 LLPHFISFFSEG-EIPGTPGTLATTFLAFGMASLTYHSDLC 227
             LLP FI FFS+  +   +PG LA+  LAF +      S LC
Sbjct:   174 LLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLC 214

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LAG5 ZDHHC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 62/194 (31%), Positives = 93/194 (47%)

Query:    55 LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--D 105
             L+    V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  +
Sbjct:    10 LEKGILVVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQE 69

Query:   106 PLN-ASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGA 164
              L  A++     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG 
Sbjct:    70 VLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGF 129

Query:   165 XXXXXXXXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHS 224
                                +  + L +FI F++ G +P T       FL F  A+  +  
Sbjct:   130 SNYKFFLLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSV 186

Query:   225 DLCNRLHQHFYVIN 238
              L +    H ++++
Sbjct:   187 SLSSLFGYHCWLVS 200

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NVH3 F1NVH3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 59/188 (31%), Positives = 90/188 (47%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPAL-DEERGEADPLNASE---FSGAQ 116
             V  L+ +H   ++ +WSY+  + T   +    +  +  D+E  E +P   S+      A 
Sbjct:    60 VVCLVAYHIFFMLFVWSYWKTIFTLPMNPSKEFHLSYSDKESLEREPRGESQQEVLRRAA 119

Query:   117 SD-PLNPR-----IRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
              D P+  R     IRYC +C+ +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   120 KDLPIYTRTMSGAIRYCDRCHLVKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 179

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRL 230
                          +  + L +FI F++ G +P T       FL F  A+  +   L +  
Sbjct:   180 LLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSVSLSSLF 236

Query:   231 HQHFYVIN 238
               H ++++
Sbjct:   237 GYHCWLVS 244

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

UNIPROTKB|F1P165 ZDHHC20 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 62/177 (35%), Positives = 86/177 (48%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPN--WRPALDEERGEAD--PLNASEF--SG 114
             V  L++FH   VM +WSY   + T   S P N       D+E+ E +  P +  E     
Sbjct:    45 VVYLVIFHLSFVMFVWSYGKTIFTSPAS-PSNEFCLSKADKEQYEKEERPESQQEILRRA 103

Query:   115 AQSDPL-----NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXX 169
             A+  P+     +  IRYC +C  +KP RCHHCS C  C+LKMDHHC WV NCVG      
Sbjct:   104 AKDLPIYTTTASRAIRYCDRCQLIKPDRCHHCSACDICVLKMDHHCPWVNNCVGFSNYKF 163

Query:   170 XXXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDL 226
                           V  ++L +FI F++  E+P T       FL F +A++ + S L
Sbjct:   164 FLLFLMYSLLYCLFVAATVLQYFIKFWTN-ELPDTHAKFHVLFLFF-VAAMFFISIL 218

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MPF2 ZDHHC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 61/188 (32%), Positives = 91/188 (48%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    50 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 109

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   110 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 169

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRL 230
                          +  + L +FI F++ G +P T       FL F  A+  +   L +  
Sbjct:   170 LLFLAYSLLYCVFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSVSLSSLF 226

Query:   231 HQHFYVIN 238
               H ++++
Sbjct:   227 GYHCWLVS 234

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G3MXF3 ZDHHC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 61/188 (32%), Positives = 91/188 (48%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    53 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 112

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:   113 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 172

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRL 230
                          +  + L +FI F++ G +P T       FL F  A+  +   L +  
Sbjct:   173 LLFLAYSLLYCVFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSVSLSSLF 229

Query:   231 HQHFYVIN 238
               H ++++
Sbjct:   230 GYHCWLVS 237

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PU04 ZDHHC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 61/188 (32%), Positives = 91/188 (48%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    13 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 72

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:    73 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 132

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRL 230
                          +  + L +FI F++ G +P T       FL F  A+  +   L +  
Sbjct:   133 LLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSVSLSSLF 189

Query:   231 HQHFYVIN 238
               H ++++
Sbjct:   190 GYHCWLVS 197

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SET7 ZDHHC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 61/188 (32%), Positives = 91/188 (48%)

Query:    61 VAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNW------RPALDEE-RGEA--DPLN-AS 110
             V  LI +H L  M +WSY+  + T   +    +      +  L+ E RGEA  + L  A+
Sbjct:    13 VVCLIAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLEREPRGEAHQEVLRRAA 72

Query:   111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGAXXXXXX 170
             +     +  ++  IRYC +C  +KP RCHHCSVC +CILKMDHHC WV NCVG       
Sbjct:    73 KDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFF 132

Query:   171 XXXXXXXXXETSLVTLSLLPHFISFFSEGEIPGTPGTLATTFLAFGMASLTYHSDLCNRL 230
                          +  + L +FI F++ G +P T       FL F  A+  +   L +  
Sbjct:   133 LLFLAYSLLYCLFIAATDLQYFIKFWTNG-LPDTQAKFHIMFLFF--AAAMFSVSLSSLF 189

Query:   231 HQHFYVIN 238
               H ++++
Sbjct:   190 GYHCWLVS 197

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYP5	ZDH14_ARATH	2, ., 3, ., 1, ., -	0.8294	0.8775	0.7003	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	2e-36
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	5e-31

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  126 bits (318), Expect = 2e-36
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 75  LWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLK 134
           LWSYF  + TD G VP N                      ++       +++C  CN +K
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEK---------EQEKQPDEESEEGDEEDELKFCSTCNIIK 51

Query: 135 PPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFIS 194
           PPR HHC VC RC+L+ DHHC W+ NC+G  N+KYFLLFLLY  L   L+ +    + + 
Sbjct: 52  PPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVY 111

Query: 195 FF-SEGEIPGTPGTLATTFLAFGMASL 220
              +         +L ++ +   ++  
Sbjct: 112 LIRNIELFFFLILSLFSSIILLVLSLF 138

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score =  116 bits (291), Expect = 5e-31
 Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 24/181 (13%)

Query: 25  IMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLT 84
           I + L+  +V  T   +V +                V  +ILF  +LV+  +SY  ++++
Sbjct: 32  IGLFLLSRIVVYTLLVIVKSL------------SLVVLFIILFIVILVLASFSYLLLLVS 79

Query: 85  DAGSVPPNWRPALDEERGEADPLNASEFSGAQ-SDPLNPRIRYCRKCNQLKPPRCHHCSV 143
           D G +  N                  E       D       +C  CN  KPPR HHCS+
Sbjct: 80  DPGYLGEN-----------ITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSI 128

Query: 144 CGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPG 203
           C RC+LK DHHC W+ NCVG  NY++F  FLLYT L   +V LS   +    FS      
Sbjct: 129 CNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTS 188

Query: 204 T 204
            
Sbjct: 189 L 189

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	99.97
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.96
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.92
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	97.13
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	96.37
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	94.9
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	91.16
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	91.13
PF13248	26	zf-ribbon_3: zinc-ribbon domain	87.05
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	86.58
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	83.2
PF12773	50	DZR: Double zinc ribbon	82.47
PTZ00303	1374	phosphatidylinositol kinase; Provisional	81.3

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.8e-48  Score=341.28  Aligned_cols=222  Identities=38%  Similarity=0.686  Sum_probs=172.0

Q ss_pred             ceeeeccccccchhHHHHhhhhheeeeeeeeeeeecccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 025960           11 NVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYDGGLDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVP   90 (245)
Q Consensus        11 ~~~~~c~~~r~~~~i~v~~i~~~i~~~~y~~~~~~~~p~l~~~~~~~~~~~~~~i~~~~l~~~~~~~y~~~~~~dPG~vp   90 (245)
                      +..+++..+|   |++++++.+.++|.||++++..+.+.+...    ..+++.+++++.++++.+|+|++++++|||.+|
T Consensus         3 ~~~~~~~~~r---~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~----~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp   75 (307)
T KOG1315|consen    3 GSRRFSKCLR---WIPVLIILLVIGWTYYVYVAVLCILSISLT----IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVP   75 (307)
T ss_pred             Ccccchhhhc---chhheeeeeeEEEEEEEeehhhhHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCc
Confidence            3344444446   999999999999999999998887766433    456788999999999999999999999999999


Q ss_pred             CCCCCCchhhhccCCCCCccccCCCCCCCCCcCceeccccccccCCCCccCcccCcccccCCcccccccceeccCchHHH
Q 025960           91 PNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYF  170 (245)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~k~F  170 (245)
                      ..+.++.++++..+.................+..|+|.+|+.+|||||||||.|+|||+||||||||+|||||.+|||+|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF  155 (307)
T KOG1315|consen   76 DSYRPSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFF  155 (307)
T ss_pred             cccCCCcCccccccccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHH
Confidence            99888665443322211111111122234466889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhHH--------HHHHHHHHHHHHHHHHHHHHHHhHhhhhhcC
Q 025960          171 LLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPGTL--------ATTFLAFGMASLTYHSDLCNRLHQHFYVING  239 (245)
Q Consensus       171 ~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~fvl~~~~~h~~l~~~~~tt~~~~~~  239 (245)
                      ++|++|+.+++.+.++.....+..++.....+.+....        ++.+...+.+++.||+||+.+|.||+|.-+-
T Consensus       156 ~lfl~y~~l~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~  232 (307)
T KOG1315|consen  156 LLFLFYTNLYSIYVLVTTLIGFTKYFQGGAGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKS  232 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhcc
Confidence            99999999999999999999888888433222221222        2222233345799999999999999997653

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=2e-39  Score=265.63  Aligned_cols=161  Identities=32%  Similarity=0.607  Sum_probs=117.9

Q ss_pred             HHHHHhhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCceeccccccccCCCCccCcccCcccccCCccc
Q 025960           76 WSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHC  155 (245)
Q Consensus        76 ~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhC  155 (245)
                      ++|++++++|||++|+....+.+++  ++.............++..++.++|.+|+..||+|||||+.||+||+|+||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC   79 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQ--EEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHC   79 (174)
T ss_pred             EEehhhheECCcccCCccccccccc--cccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccc
Confidence            5789999999999997622111111  11111111111122344677889999999999999999999999999999999


Q ss_pred             ccccceeccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh-h---------HHHHHHHHHHHHHHHHHHH
Q 025960          156 VWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTP-G---------TLATTFLAFGMASLTYHSD  225 (245)
Q Consensus       156 pwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~l~fvl~~~~~h~~  225 (245)
                      ||+|||||++|||+|++|+++..+.+++.....+..+............. .         ..++++..++..++.+|++
T Consensus        80 ~w~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (174)
T PF01529_consen   80 PWLGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLY  159 (174)
T ss_pred             hhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888888777777665543222111 1         1122233445568899999


Q ss_pred             HHHHHhHhhhhhc
Q 025960          226 LCNRLHQHFYVIN  238 (245)
Q Consensus       226 l~~~~~tt~~~~~  238 (245)
                      ++.+|.||+|.+|
T Consensus       160 ~i~~n~Tt~E~~~  172 (174)
T PF01529_consen  160 LILRNITTYERIK  172 (174)
T ss_pred             HHHcCCcHHHHHH
Confidence            9999999999987

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=3.7e-38  Score=279.49  Aligned_cols=150  Identities=33%  Similarity=0.679  Sum_probs=111.4

Q ss_pred             cCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCceeccccccccCCCCccCcccCcccccCCcccccccceec
Q 025960           84 TDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVG  163 (245)
Q Consensus        84 ~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG  163 (245)
                      +|||.+|++..+..+..  ++.+    ...+...++...+.+||.+|+..|||||||||.||+||+||||||||+|||||
T Consensus        79 sdpg~~p~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG  152 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIEDP--ERAP----LYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIG  152 (299)
T ss_pred             CCCceecCcccCCCCCc--cccc----cCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceEC
Confidence            59999998631111110  1111    11112234556678999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----h----h-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 025960          164 ALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGT----P----G-----TLATTFLAFGMASLTYHSDLCNRL  230 (245)
Q Consensus       164 ~~N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~-----~~~~~~l~fvl~~~~~h~~l~~~~  230 (245)
                      ++|||+|+.|++++.+.+++.++.....+.....+.....+    .    .     ...++++.++..++.+|.+++.++
T Consensus       153 ~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~  232 (299)
T KOG1311|consen  153 ERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSG  232 (299)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecC
Confidence            99999999999999999999888888877765554322222    1    1     122333445556899999999999


Q ss_pred             hHhhhhhcC
Q 025960          231 HQHFYVING  239 (245)
Q Consensus       231 ~tt~~~~~~  239 (245)
                      +||+|-+++
T Consensus       233 ~Tt~e~~~~  241 (299)
T KOG1311|consen  233 STTYESIKS  241 (299)
T ss_pred             cchhhhhhc
Confidence            999999886

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=3e-36  Score=266.96  Aligned_cols=166  Identities=34%  Similarity=0.567  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCceeccccccccCCCCccCc
Q 025960           63 VLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCS  142 (245)
Q Consensus        63 ~~i~~~~l~~~~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~  142 (245)
                      ..+.+.+...+...+|++..++|||+.+++-.....++..+          .....+..+..++|.+|+.+||+|||||+
T Consensus        58 ~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~C~~C~~~KP~RS~HC~  127 (309)
T COG5273          58 FIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETIS----------RLLDDGKFGTENFCSTCNIYKPPRSHHCS  127 (309)
T ss_pred             hhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhh----------hhhhcCccccceeccccccccCCCCccch
Confidence            44555666677888999999999999985432221111111          12233556788999999999999999999


Q ss_pred             ccCcccccCCcccccccceeccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChh--------HHHHHHHH
Q 025960          143 VCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTPG--------TLATTFLA  214 (245)
Q Consensus       143 ~C~~CV~~~DHhCpwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~  214 (245)
                      .||+||+||||||||+|||||++|||+|++|+++....+..+++.....+....+.+..+....        .....++.
T Consensus       128 ~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~f~  207 (309)
T COG5273         128 ICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLAICFLIFGCSLLGVVFFI  207 (309)
T ss_pred             hhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHhhhHHHHHHHH
Confidence            9999999999999999999999999999999999988888877777776666554433333220        12223345


Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhhc
Q 025960          215 FGMASLTYHSDLCNRLHQHFYVIN  238 (245)
Q Consensus       215 fvl~~~~~h~~l~~~~~tt~~~~~  238 (245)
                      ++.+++.+|.++++-+.||+|+..
T Consensus       208 ~~~~~~~~~~~~~~~~~t~~e~~~  231 (309)
T COG5273         208 ITTLLLLFLIYLILNNLTTIEFIQ  231 (309)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHH
Confidence            566789999999999999998764

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=7.1e-37  Score=265.86  Aligned_cols=112  Identities=41%  Similarity=0.873  Sum_probs=96.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCceecccccccc
Q 025960           55 LDSVTAVAVLILFHCLLVMLLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLK  134 (245)
Q Consensus        55 ~~~~~~~~~~i~~~~l~~~~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~k  134 (245)
                      ..+..++..-+.|.+...|++++|+.+++++||++|++|.|+...                    +..-.+||.+|+.+|
T Consensus        42 ~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~--------------------D~~~lqfCk~CqgYK  101 (414)
T KOG1314|consen   42 LSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPK--------------------DEMFLQFCKKCQGYK  101 (414)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCh--------------------hHHHHHHHhhccCcC
Confidence            344456667777888899999999999999999999999884321                    123468999999999


Q ss_pred             CCCCccCcccCcccccCCcccccccceeccCchHHHHHHHHHHHHHHHHHHH
Q 025960          135 PPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTL  186 (245)
Q Consensus       135 P~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~  186 (245)
                      +|||||||.|||||++|||||||+|||||..||.+|..||++..++|+...+
T Consensus       102 apRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~ti  153 (414)
T KOG1314|consen  102 APRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTI  153 (414)
T ss_pred             CCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhccccee
Confidence            9999999999999999999999999999999999999999999997655433

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.97  E-value=2.4e-31  Score=224.85  Aligned_cols=75  Identities=49%  Similarity=1.066  Sum_probs=68.7

Q ss_pred             CceeccccccccCCCCccCcccCcccccCCcccccccceeccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025960          123 RIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPHFISFFS  197 (245)
Q Consensus       123 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~  197 (245)
                      ...+|.+|+.+||||+||||.||+||+||||||||+|||||.+|||||++|++|+.+++.++.++..+.+++...
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le  175 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLE  175 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            458999999999999999999999999999999999999999999999999999999999988887666665443

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.96  E-value=1.9e-29  Score=214.51  Aligned_cols=105  Identities=31%  Similarity=0.623  Sum_probs=79.7

Q ss_pred             HHHHHHHhhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCceeccccccccCCCCccCcccCcccccCCc
Q 025960           74 LLWSYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRIRYCRKCNQLKPPRCHHCSVCGRCILKMDH  153 (245)
Q Consensus        74 ~~~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DH  153 (245)
                      =..++..++.+|||.+.++-...    ..++.|-         ++....+...|++|+..||.||||||.|||||.||||
T Consensus       111 p~i~f~ltc~snpg~i~k~n~s~----~~~~ypY---------Dy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfDH  177 (341)
T KOG1312|consen  111 PLIFFTLTCGSNPGIITKANESL----FLHVYPY---------DYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFDH  177 (341)
T ss_pred             HHHHHhhhhcCCCCccchhhhcc----ceeccCc---------cceeecCCCccccccCCCccccccchHHHHHHHHhcc
Confidence            34466788999999997531111    1111111         1112334578999999999999999999999999999


Q ss_pred             ccccccceeccCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025960          154 HCVWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLPH  191 (245)
Q Consensus       154 hCpwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~~~~~~  191 (245)
                      ||.|+|||||.+|+|||++|+++...++.+..+.+...
T Consensus       178 HCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi  215 (341)
T KOG1312|consen  178 HCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFI  215 (341)
T ss_pred             ceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence            99999999999999999999999977777776665544

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.92  E-value=2.7e-25  Score=206.68  Aligned_cols=102  Identities=31%  Similarity=0.582  Sum_probs=76.0

Q ss_pred             HHHHhhhcCCCCCCCCCCCCchhhhccCCCCCccccCCCCCCCCCcCc-eeccccccccCCCCccCcccCcccccCCccc
Q 025960           77 SYFSVVLTDAGSVPPNWRPALDEERGEADPLNASEFSGAQSDPLNPRI-RYCRKCNQLKPPRCHHCSVCGRCILKMDHHC  155 (245)
Q Consensus        77 ~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhC  155 (245)
                      ++.+...+|||++|......      ++.      ..+..+.++.+.. +||.+|...||.|||||+.|||||.||||||
T Consensus       384 ~f~~~~rsDPg~i~~~~~~~------~~t------Is~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhC  451 (600)
T KOG0509|consen  384 TFGLFLRSDPGFIPTSTEVG------RET------ISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHC  451 (600)
T ss_pred             HHHHHhccCCCCCCCchhhH------HHH------HHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCC
Confidence            44455559999998542221      000      0011122334445 6999999999999999999999999999999


Q ss_pred             ccccceeccCchHHHHHHHHHHHHHHHHHHHHHHH
Q 025960          156 VWVVNCVGALNYKYFLLFLLYTFLETSLVTLSLLP  190 (245)
Q Consensus       156 pwi~nCIG~~N~k~F~~fl~~~~~~~~~~~~~~~~  190 (245)
                      ||++||||.+|||+|+.|++.....+.+.+....+
T Consensus       452 Pwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~  486 (600)
T KOG0509|consen  452 PWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLY  486 (600)
T ss_pred             CccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999877766665555433

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.13  E-value=0.0031  Score=51.11  Aligned_cols=111  Identities=11%  Similarity=0.132  Sum_probs=76.2

Q ss_pred             cCCCCccCcccCcccccCCcccccccceeccCch-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 025960          134 KPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNY-----------KYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIP  202 (245)
Q Consensus       134 kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~-----------k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (245)
                      ...+.+.|+.|+.=....-|||+.-+.||-+.-|           +..-.|+.++....+..+......+........ .
T Consensus        44 ~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~-~  122 (174)
T PF01529_consen   44 ENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIP-S  122 (174)
T ss_pred             cCCCCEECcccCCcCCCcceeccccccccccccccchhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Confidence            6677899999998888889999999999977654           456678877777777766666666655555433 2


Q ss_pred             CChhHHH-HH----HHHHHHHHHHHHHHHHHHHhHhhhhhcCceeecC
Q 025960          203 GTPGTLA-TT----FLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQF  245 (245)
Q Consensus       203 ~~~~~~~-~~----~l~fvl~~~~~h~~l~~~~~tt~~~~~~~~~~~~  245 (245)
                      ....... ..    ++.++.+.+..-.-..+...+++.+.+|.|+.|.
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~  170 (174)
T PF01529_consen  123 ISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLILRNITTYER  170 (174)
T ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence            3333333 22    2333333444444456677799999999999884

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=96.37  E-value=0.017  Score=51.28  Aligned_cols=108  Identities=19%  Similarity=0.223  Sum_probs=70.5

Q ss_pred             CCccCcccCcccccCCcccccccceeccC-----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh
Q 025960          137 RCHHCSVCGRCILKMDHHCVWVVNCVGAL-----------NYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTP  205 (245)
Q Consensus       137 Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~-----------N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (245)
                      +.++|..|+..+.+.-|||+.=|+||-+.           ..|.+-.|+.++....+..+..+...++......+.....
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~  191 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVN  191 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            47999999999999999999999999776           4578899997777554444444544555544432222111


Q ss_pred             hH--H--HHH---HHHHHHHHHHHHHHHHHHHhHhhhhhcCceeec
Q 025960          206 GT--L--ATT---FLAFGMASLTYHSDLCNRLHQHFYVINGVSLLQ  244 (245)
Q Consensus       206 ~~--~--~~~---~l~fvl~~~~~h~~l~~~~~tt~~~~~~~~~~~  244 (245)
                      ..  .  ...   ++..+++.++.-....+...+.+-+.+|.|+.|
T Consensus       192 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e  237 (299)
T KOG1311|consen  192 LTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYE  237 (299)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhh
Confidence            22  1  111   122233444444445677778888888988866

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=94.90  E-value=1.6  Score=38.97  Aligned_cols=108  Identities=19%  Similarity=0.300  Sum_probs=76.2

Q ss_pred             CCccCcccCcccccCCcccccccceeccC-----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh
Q 025960          137 RCHHCSVCGRCILKMDHHCVWVVNCVGAL-----------NYKYFLLFLLYTFLETSLVTLSLLPHFISFFSEGEIPGTP  205 (245)
Q Consensus       137 Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~-----------N~k~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (245)
                      +.+.|..|+.-....-|||.--+.||.+.           +++.+=-|+++..-+.++....+...+......-.....+
T Consensus       108 ~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~~~~~~~~~~~~~~~~  187 (307)
T KOG1315|consen  108 AVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVTTLIGFTKYFQGGAGP  187 (307)
T ss_pred             CceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            77899999999999999999999999876           4567778888877777666666766666666543111222


Q ss_pred             hHHHHHHHHH--HHHHHHHHHHHHHHHhHhhhhhcCceeec
Q 025960          206 GTLATTFLAF--GMASLTYHSDLCNRLHQHFYVINGVSLLQ  244 (245)
Q Consensus       206 ~~~~~~~l~f--vl~~~~~h~~l~~~~~tt~~~~~~~~~~~  244 (245)
                      ......+..+  +++..+.-..+.+...++..+++|.|+.|
T Consensus       188 ~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE  228 (307)
T KOG1315|consen  188 SSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIE  228 (307)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHh
Confidence            3445555543  22322223334478889999999999987

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=91.16  E-value=1.7  Score=38.99  Aligned_cols=32  Identities=28%  Similarity=0.519  Sum_probs=16.9

Q ss_pred             CcCceeccccccccCCCCccCcccCcccccCC
Q 025960          121 NPRIRYCRKCNQLKPPRCHHCSVCGRCILKMD  152 (245)
Q Consensus       121 ~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~D  152 (245)
                      +++.+.|+.|+.=-...-|||.--|+||-+--
T Consensus       120 P~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N  151 (309)
T COG5273         120 PPRSHHCSICNRCVLKFDHHCPWINNCVGFRN  151 (309)
T ss_pred             CCCCccchhhcchhhccCccCcccccccCcch
Confidence            44445555555555555555555555555433

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=91.13  E-value=0.12  Score=27.91  Aligned_cols=21  Identities=29%  Similarity=0.842  Sum_probs=18.1

Q ss_pred             eccccccccCCCCccCcccCc
Q 025960          126 YCRKCNQLKPPRCHHCSVCGR  146 (245)
Q Consensus       126 ~C~~C~~~kP~Rs~HC~~C~~  146 (245)
                      +|+.|+..-++.++.|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            588899888999999998875

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=87.05  E-value=0.34  Score=26.78  Aligned_cols=22  Identities=27%  Similarity=0.854  Sum_probs=18.6

Q ss_pred             eeccccccccCCCCccCcccCc
Q 025960          125 RYCRKCNQLKPPRCHHCSVCGR  146 (245)
Q Consensus       125 ~~C~~C~~~kP~Rs~HC~~C~~  146 (245)
                      ++|+.|+..-++.++.|+.||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6789999887888899988875

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=86.58  E-value=0.41  Score=30.52  Aligned_cols=24  Identities=33%  Similarity=0.838  Sum_probs=21.7

Q ss_pred             CceeccccccccCCCCccCcccCc
Q 025960          123 RIRYCRKCNQLKPPRCHHCSVCGR  146 (245)
Q Consensus       123 ~~~~C~~C~~~kP~Rs~HC~~C~~  146 (245)
                      ..+.|..|+..-|+|+..|+.||.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            457899999999999999999886

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=83.20  E-value=2.7  Score=40.69  Aligned_cols=52  Identities=6%  Similarity=-0.161  Sum_probs=45.3

Q ss_pred             cCceeccccccccCCCCccCcccCcccccCCcccccccceeccCchHHHHHHH
Q 025960          122 PRIRYCRKCNQLKPPRCHHCSVCGRCILKMDHHCVWVVNCVGALNYKYFLLFL  174 (245)
Q Consensus       122 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~~DHhCpwi~nCIG~~N~k~F~~fl  174 (245)
                      .....|.+|....+.+..++..+-.+...+++||+|+. +|+.+|...+....
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~~~~~~  374 (600)
T KOG0509|consen  323 VLTCLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFDFHYCF  374 (600)
T ss_pred             hhheeccchhhccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhhhHHHH
Confidence            34577899999999999999999999999999999999 99999987654433

>PF12773 DZR: Double zinc ribbon

Probab=82.47  E-value=1.2  Score=28.35  Aligned_cols=35  Identities=20%  Similarity=0.485  Sum_probs=22.9

Q ss_pred             CceeccccccccC---CCCccCcccCcccccCCccccc
Q 025960          123 RIRYCRKCNQLKP---PRCHHCSVCGRCILKMDHHCVW  157 (245)
Q Consensus       123 ~~~~C~~C~~~kP---~Rs~HC~~C~~CV~~~DHhCpw  157 (245)
                      ..++|..|+..-+   .....|+.|++=+...+.+|+.
T Consensus        11 ~~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~   48 (50)
T PF12773_consen   11 DAKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN   48 (50)
T ss_pred             cccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence            3577777776655   2356677777776666666663

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=81.30  E-value=0.94  Score=45.03  Aligned_cols=22  Identities=36%  Similarity=0.880  Sum_probs=18.2

Q ss_pred             eeccccccccC-------CCCccCcccCc
Q 025960          125 RYCRKCNQLKP-------PRCHHCSVCGR  146 (245)
Q Consensus       125 ~~C~~C~~~kP-------~Rs~HC~~C~~  146 (245)
                      +.|..|+..-.       .|-||||.||+
T Consensus       461 dtC~~C~kkFfSlsK~L~~RKHHCRkCGr  489 (1374)
T PTZ00303        461 DSCPSCGRAFISLSRPLGTRAHHCRSCGI  489 (1374)
T ss_pred             CcccCcCCcccccccccccccccccCCcc
Confidence            67999987664       39999999977

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 33/169 (19%), Positives = 48/169 (28%), Gaps = 47/169 (27%)

Query: 68  HCLLVML------LWSYFSV---VL--------TDAGSVPPNWRPALDEERGEADPLNAS 110
           +CLLV+L       W+ F++   +L        TD  S       +LD        L   
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS---MTLTPD 301

Query: 111 EFSGAQSDPLNPRIRYCRKCNQLKPPRCH----HCSVCGRCILKMDHHCVWVVNCVGALN 166
           E        L+       +   L            S+        D    W        N
Sbjct: 302 EVKSLLLKYLD------CRPQDLPREVLTTNPRRLSIIAE--SIRDGLATWD-------N 346

Query: 167 YKYFLLFLLYTFLETSLVTLS---LLPHFISF--FSEG-EIPGTPGTLA 209
           +K+     L T +E+SL  L        F     F     IP     L+
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLS 393

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	83.92

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=83.92  E-value=0.67  Score=29.65  Aligned_cols=29  Identities=34%  Similarity=0.718  Sum_probs=24.4

Q ss_pred             cCceeccccccccCCCCccCcccCccccc
Q 025960          122 PRIRYCRKCNQLKPPRCHHCSVCGRCILK  150 (245)
Q Consensus       122 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~~  150 (245)
                      .....|..|+..-|+|+..|+.||.--+|
T Consensus        17 ~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           17 FLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             hchhhhccccCcCCcccccccCCCCCCCC
Confidence            35688999999999999999999865444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	88.42

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=88.42  E-value=0.14  Score=31.11  Aligned_cols=26  Identities=35%  Similarity=0.729  Sum_probs=22.5

Q ss_pred             CcCceeccccccccCCCCccCcccCc
Q 025960          121 NPRIRYCRKCNQLKPPRCHHCSVCGR  146 (245)
Q Consensus       121 ~~~~~~C~~C~~~kP~Rs~HC~~C~~  146 (245)
                      ....+.|.+|...-|+|+..|+.||.
T Consensus        16 ~~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          16 VFLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             SCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhhHHHhhccccCCccccccccCCC
Confidence            33568899999999999999998875