Citrus Sinensis ID: 026024

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEEEccccHHHHHHHHHccccEEEEEEEcccccEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccccEEEEEEcccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHccccccccccHHHcccEEEEEEEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEEEEccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEccccccccccEEEEcccccEEEEEccccHHHHcccc
Coil and Loop (DISEMBL)
masvasiscstslsRLSIFSRltsstrplflspsslpffsstktttswfkasnrfrllsmassepkespannpglhtardeatngyfmqqtmfrikdpkvSLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielthnwgtesdpdfkgyhngnseprgfghigiTVDDVYKACERFERLGvefakkpdggklkgvafikdpddywiEIFDlktigkiggst
Flexible Loop (DISEMBL)
masvasiscstslsrLSIFSRLTSStrplflspsslpffsstKTTTSWFKASNRFRLLSMAssepkespannpgLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELthnwgtesdPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLgvefakkpdggklkgvafikdpddywIEIFdlktigkiggst
Low Complexity Region (SEG)
MASVAsiscstslsrlsifsrltsstrplflspsslpffsstktttsWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered region (IsUnstruct)
*****************IF******************FF****TTTSWFKA********************************NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES***FKGYH*****PRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI****
Disordered Region (DISOPRED)
*******************************************************************************DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASA****VD*TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD***********
Disordered Region (DISEMBL)
***********SLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMA**********NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered Region (DISPRO)
***VASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKES**NNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
O49818	186	Lactoylglutathione lyase	N/A	no	0.741	0.973	0.850	7e-92
O04885	185	Lactoylglutathione lyase	N/A	no	0.745	0.983	0.835	1e-90
Q9ZS21	185	Lactoylglutathione lyase	no	no	0.733	0.967	0.821	2e-89
Q42891	185	Lactoylglutathione lyase	N/A	no	0.745	0.983	0.802	1e-86
Q8H0V3	185	Lactoylglutathione lyase	no	no	0.725	0.956	0.858	4e-85
Q9CPU0	184	Lactoylglutathione lyase	yes	no	0.655	0.869	0.652	4e-60
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	0.655	0.869	0.639	6e-60
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	0.627	0.831	0.629	8e-57
Q04760	184	Lactoylglutathione lyase	yes	no	0.627	0.831	0.629	2e-56
Q9HU72	176	Lactoylglutathione lyase	yes	no	0.684	0.948	0.541	4e-46

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  336 bits (862), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 166/181 (91%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 239
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGN 180

Query: 240 I 240
           +
Sbjct: 181 V 181

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Cicer arietinum (taxid: 3827)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  332 bits (852), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 165/182 (90%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 241
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 242 GS 243
           G+
Sbjct: 182 GN 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica juncea (taxid: 3707)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  328 bits (842), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 147/179 (82%), Positives = 164/179 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           FGHIG+TVDD YKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 122 FGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  319 bits (817), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 146/182 (80%), Positives = 162/182 (89%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE K+SP+NNPGLH   DEAT GYF+QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPE
Sbjct: 2   ASESKDSPSNNPGLHATPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 241
           FGHIG+TVDDVYKACERFE LGVEF KKP  GK+KG+AFIKDPD YWIEIFD K I    
Sbjct: 122 FGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAA 181

Query: 242 GS 243
           GS
Sbjct: 182 GS 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  314 bits (805), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 152/177 (85%), Positives = 163/177 (92%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG 238
           FGHIG+TVDDV+KACERFE LGVEFAKKP+ GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 122 FGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 178

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  231 bits (589), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  230 bits (587), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct: 84  DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           E LGV+F KKPD GK+KG+AF++DPD YWIEI +   +  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPNKMATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  220 bits (560), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RF
Sbjct: 84  DKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRF 142

Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)

Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 83

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  184 bits (468), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/170 (54%), Positives = 109/170 (64%), Gaps = 3/170 (1%)

Query: 72  NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 131
            PG+    D  T  Y    TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL  
Sbjct: 8   QPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAM 67

Query: 132 EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD 191
                 P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D
Sbjct: 68  TRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPD 125

Query: 192 VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 241
           +  ACERFE LGV F K  D G +K VAFI DPD YW+EI      G++G
Sbjct: 126 LVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMG 174

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
255565419	234	lactoylglutathione lyase, putative [Rici	0.950	0.991	0.736	1e-96
356542658	235	PREDICTED: lactoylglutathione lyase-like	0.930	0.965	0.734	4e-93
255630246	224	unknown [Glycine max]	0.909	0.991	0.734	2e-92
225436504	235	PREDICTED: lactoylglutathione lyase isof	0.856	0.889	0.762	3e-91
297843598	235	calmodulin binding protein [Arabidopsis	0.926	0.961	0.704	8e-91
3334245	186	RecName: Full=Lactoylglutathione lyase;	0.741	0.973	0.850	4e-90
388516521	186	unknown [Medicago truncatula]	0.754	0.989	0.836	6e-90
117203563	187	glyoxalase I [Arachis hypogaea]	0.745	0.973	0.835	3e-89
3334244	185	RecName: Full=Lactoylglutathione lyase;	0.745	0.983	0.835	6e-89
359479353	185	PREDICTED: lactoylglutathione lyase isof	0.733	0.967	0.849	6e-89

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 179/243 (73%), Positives = 197/243 (81%), Gaps = 11/243 (4%)

Query: 1   MASVASISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSM 60
           MA+ A++S        S+ SR T   +P  +S SS    S  +   S  K  NR RL SM
Sbjct: 1   MATAATLS--------SLLSRFTL-IKPPIISQSSRRIQSILRY--SKLKNPNRLRLFSM 49

Query: 61  ASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP 120
           ASSEPKESPANNPGL+T  D+AT GY MQQTM+RIKDPK SLDFYS VLGMSLLKRLDFP
Sbjct: 50  ASSEPKESPANNPGLYTTPDDATKGYIMQQTMYRIKDPKQSLDFYSHVLGMSLLKRLDFP 109

Query: 121 EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPR 180
           EMKFSLYF+GYE+TASAP DPV+RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEPR
Sbjct: 110 EMKFSLYFMGYENTASAPTDPVERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPR 169

Query: 181 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           GFGHIGITVDDVYKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFDLKTIGK 
Sbjct: 170 GFGHIGITVDDVYKACERFKSLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDLKTIGKT 229

Query: 241 GGS 243
            GS
Sbjct: 230 TGS 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542658|ref|XP_003539783.1| PREDICTED: lactoylglutathione lyase-like [Glycine max]

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 174/237 (73%), Positives = 192/237 (81%), Gaps = 10/237 (4%)

Query: 7   ISCSTSLSRLSIFSRLTSSTRPLFLSPSSLP-FFSSTKTTTSWFKASNRFRLL--SMASS 63
           ++ + SL RLS   R  +  +P FLSP S P  FS T  T    K  NRFR    SMA+ 
Sbjct: 1   MAATASLHRLSRL-RFIAKPQP-FLSPHSTPSHFSLTPKT----KKPNRFRFRFRSMAA- 53

Query: 64  EPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 123
           EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK
Sbjct: 54  EPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 113

Query: 124 FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFG 183
           FSLYF+GYEDT  AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFG
Sbjct: 114 FSLYFMGYEDTTEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFG 173

Query: 184 HIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           HIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 174 HIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 230

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255630246|gb|ACU15478.1| unknown [Glycine max]

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/230 (73%), Positives = 191/230 (83%), Gaps = 8/230 (3%)

Query: 7   ISCSTSLSRLSIFSRLTSSTRPLFLSPSSLP-FFSSTKTTTSWFKASNRFRLLSMASSEP 65
           ++ + SL RLS   R  +  +P FLSP S+P  FS T  T    K +NRFR LSMA+ EP
Sbjct: 1   MTVTASLHRLSRL-RFIAKPQP-FLSPHSIPSHFSLTPKT----KKANRFRFLSMAA-EP 53

Query: 66  KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 125
           KESP+NNPGL T  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS
Sbjct: 54  KESPSNNPGLRTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 113

Query: 126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 185
           LYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRGFGHI
Sbjct: 114 LYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHI 173

Query: 186 GITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK 235
           G+TVDD YKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD K
Sbjct: 174 GVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRK 223

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436504|ref|XP_002276276.1| PREDICTED: lactoylglutathione lyase isoform 1 [Vitis vinifera] gi|297734925|emb|CBI17159.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 164/215 (76%), Positives = 183/215 (85%), Gaps = 6/215 (2%)

Query: 27  RPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMA-SSEPKESPANNPGLHTARDEATNG 85
           +P     SS+P F +T       K  +RFRL S + +SEPKESP+NNPGLH++ DEAT G
Sbjct: 21  KPSSSYSSSIPLFPTTTR-----KDPSRFRLFSASMASEPKESPSNNPGLHSSPDEATKG 75

Query: 86  YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
           YFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP++  +R 
Sbjct: 76  YFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSNETERI 135

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
           VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD YKACERFERLGVE
Sbjct: 136 VWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVE 195

Query: 206 FAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           F KKPD GK+KG+AFIKDPD YWIEIFDL+ IG +
Sbjct: 196 FVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTV 230

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843598|ref|XP_002889680.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335522|gb|EFH65939.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (868), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 167/237 (70%), Positives = 188/237 (79%), Gaps = 11/237 (4%)

Query: 4   VASISCSTSLSRLSIFSRLTSSTRPLFLSPSS--LPFFSSTKTTTSWFKASNRFRLLSMA 61
           + S S + ++SR+S   R        F+ P S    F +    +T   K  ++ R+ SMA
Sbjct: 1   MGSYSIAIAISRISPLIR--------FVKPYSTGFSFITCPCNSTRRPKRFDQLRVFSMA 52

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           S E +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYS VLGMSLLKRLDF E
Sbjct: 53  S-EARESPANNPGLSTVRDEATKGYIMQQTMFRIKDPKASLDFYSHVLGMSLLKRLDFSE 111

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT +APADP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 112 MKFSLYFLGYEDTTTAPADPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 171

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG 238
           FGHIG+TVDDV+KACERFE LGVEF KKP+ GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 172 FGHIGVTVDDVHKACERFEELGVEFVKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 228

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 166/181 (91%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 239
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGN 180

Query: 240 I 240
           +
Sbjct: 181 V 181

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  336 bits (861), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 154/184 (83%), Positives = 167/184 (90%)

Query: 60  MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 119
           MA+SE KESPANNPGLH   DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 179
           PEMKFSLYF+GYEDT+ AP++ VDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 180 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 239
           RGFGHIGITVDD YKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGN 180

Query: 240 IGGS 243
           + GS
Sbjct: 181 VTGS 184

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 166/182 (91%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 241
           FGHIG+TVDDV+KACERFE+LGVEF KKP+ GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 242 GS 243
           G+
Sbjct: 182 GN 183

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 165/182 (90%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 241
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 242 GS 243
           G+
Sbjct: 182 GN 183

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479353|ref|XP_003632261.1| PREDICTED: lactoylglutathione lyase isoform 2 [Vitis vinifera]

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 152/179 (84%), Positives = 166/179 (92%)

Query: 62  SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 121
           +SEPKESP+NNPGLH++ DEAT GYFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   ASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 181
           MKFSLYF+GYEDTASAP++  +R VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRG 121

Query: 182 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           FGHIGITVDD YKACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDL+ IG +
Sbjct: 122 FGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTV 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.770	0.8	0.825	1.7e-84
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.655	0.869	0.652	7.5e-57
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.635	0.815	0.666	9.6e-57
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.627	0.831	0.662	1.2e-56
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.643	0.892	0.639	1.4e-55
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.627	0.831	0.658	3.7e-55
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.643	0.853	0.626	1.6e-54
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	0.606	0.822	0.671	2.6e-54
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.627	0.831	0.642	3.4e-54
UNIPROTKB|J9NRV6	184	GLO1 "Uncharacterized protein"	0.627	0.831	0.636	4.3e-54

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 156/189 (82%), Positives = 169/189 (89%)

Query:    50 KASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVL 109
             K  ++  + SMAS E +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVL
Sbjct:    41 KRFDQLCVFSMAS-EARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVL 99

Query:   110 GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF 169
             GMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+F
Sbjct:   100 GMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEF 159

Query:   170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWI 229
             KGYHNGNSEPRGFGHIG+TVDDV+KACERFE LGVEFAKKP+ GK+K +AFIKDPD YWI
Sbjct:   160 KGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWI 219

Query:   230 EIFDLKTIG 238
             EIFDLKTIG
Sbjct:   220 EIFDLKTIG 228

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 105/161 (65%), Positives = 126/161 (78%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct:    84 DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 104/156 (66%), Positives = 125/156 (80%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P 
Sbjct:    30 DPSTKDFIFQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPK 89

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  +RT WTF + AT+ELTHNWGTE+D + + YHNGNS+PRGFGHIGI V DV KAC+RF
Sbjct:    90 DKAERTSWTFSRKATLELTHNWGTEND-EKQSYHNGNSDPRGFGHIGIAVPDVNKACKRF 148

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK 235
             E LGV+F KKPD GK+KG+AF++DPD YWIEI + K
Sbjct:   149 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPK 184

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 102/154 (66%), Positives = 124/154 (80%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct:    84 DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
             E LGV+F KKPD GK+KG+AF++DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILN 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 101/158 (63%), Positives = 122/158 (77%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM+RIKDP+ SL FY+ VLGM+LL +LDFPE KFSLYFLGYE+    P 
Sbjct:    20 DSSTKDFLFQQTMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDVPK 79

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             DP  R  W   + ATIELTHNWGTE DPD + YH GN++PRGFGHIGI V DVY AC+RF
Sbjct:    80 DPKQRRSWALSRKATIELTHNWGTERDPD-QNYHTGNTDPRGFGHIGIMVPDVYAACQRF 138

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 237
             + LGV+F KKPD G++KG+AFIKDPD YWIEIF+  ++
Sbjct:   139 QELGVDFVKKPDDGRMKGLAFIKDPDGYWIEIFNAHSV 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 102/155 (65%), Positives = 121/155 (78%)

Query:    83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 142
             T  + +QQTM RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  
Sbjct:    28 TKDFMLQQTMLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVN 87

Query:   143 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 202
             +RT WTF + AT+ELTHNWGTE+D   K YHNGNS+PRGFGHIG+ V DVY AC+RFE L
Sbjct:    88 ERTAWTFSRKATLELTHNWGTENDE--KPYHNGNSDPRGFGHIGLAVPDVYAACKRFEEL 145

Query:   203 GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 237
             GV F KKPD GK+KG+AFI+DPD YWIEI    T+
Sbjct:   146 GVTFVKKPDDGKMKGLAFIQDPDGYWIEILSPNTM 180

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 99/158 (62%), Positives = 124/158 (78%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWVFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 237
             E LG++F KKPD GK+KG+AFI+DPD YWIEI +  T+
Sbjct:   143 EELGIKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNTM 180

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 100/149 (67%), Positives = 119/149 (79%)

Query:    83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 142
             T  + MQQTM R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  
Sbjct:    22 TKDFMMQQTMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVK 81

Query:   143 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 202
             +RT WTF + ATIELTHNWG+E+D D + YHNGNS+PRGFGHIGI V DVY AC+ FE  
Sbjct:    82 ERTAWTFSRRATIELTHNWGSETD-DSQSYHNGNSDPRGFGHIGIAVPDVYAACKLFEEN 140

Query:   203 GVEFAKKPDGGKLKGVAFIKDPDDYWIEI 231
             GV F KKPD GK+KG+AFI+DPD YWIEI
Sbjct:   141 GVTFVKKPDEGKMKGLAFIQDPDGYWIEI 169

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 99/154 (64%), Positives = 121/154 (78%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  +  QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLFQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKSEKAAWAFSRKATLELTHNWGTEDD-ESQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9NRV6 GLO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 98/154 (63%), Positives = 122/154 (79%)

Query:    80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YE+    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEEKNDIPK 83

Query:   140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWAFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHSACKRF 142

Query:   200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O04885	LGUL_BRAJU	4, ., 4, ., 1, ., 5	0.8351	0.7459	0.9837	N/A	no
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.6298	0.6270	0.8315	yes	no
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.6521	0.6557	0.8695	yes	no
O49818	LGUL_CICAR	4, ., 4, ., 1, ., 5	0.8508	0.7418	0.9731	N/A	no
Q9HU72	LGUL_PSEAE	4, ., 4, ., 1, ., 5	0.5411	0.6844	0.9488	yes	no
Q42891	LGUL_SOLLC	4, ., 4, ., 1, ., 5	0.8021	0.7459	0.9837	N/A	no
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.6397	0.6557	0.8695	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	0.691
4th Layer	4.4.1.5	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh1_pg.C_scaffold_1000665	annotation not avaliable (235 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	scaffold_402974.1	annotation not avaliable (284 aa)				•		•	•		0.783
	scaffold_301249.1	annotation not avaliable (258 aa)	•			•		•	•		0.695
	fgenesh2_kg.6__3118__AT4G11640.1	annotation not avaliable (331 aa)						•	•		0.616
	Al_scaffold_0001_4800	annotation not avaliable (259 aa)						•	•		0.571
	fgenesh1_pm.C_scaffold_4000942	annotation not avaliable (324 aa)	•					•	•		0.551
	scaffold_301151.1	annotation not avaliable (591 aa)						•	•		0.543
	fgenesh2_kg.8__2416__AT5G64050.1	annotation not avaliable (570 aa)	•						•		0.538
	fgenesh2_kg.4__2513__AT2G43430.1	annotation not avaliable (331 aa)	•					•	•		0.485

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	244
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-135
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-125
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	1e-71
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	4e-67
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-24
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-22
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	4e-20
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	3e-15
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	9e-14
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-13
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	6e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	4e-07
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-05
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	9e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-04
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.003

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  380 bits (977), Expect = e-135
 Identities = 173/238 (72%), Positives = 191/238 (80%), Gaps = 7/238 (2%)

Query: 6   SISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEP 65
           S S +T++SRLS    +    +P     S +  F     +T   K  +R R+ SMAS EP
Sbjct: 1   SYSIATAISRLSPLILIV---KPYSSGSSFITCFC---NSTRKPKRFDRLRVFSMAS-EP 53

Query: 66  KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS 125
           KESPANNPGL T+ DEAT GY MQQTM+RIKDPK SLDFYSRVLGMSLLKRLDFPEMKFS
Sbjct: 54  KESPANNPGLSTSPDEATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFS 113

Query: 126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 185
           LYF+GYEDTASAP DP +RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI
Sbjct: 114 LYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHI 173

Query: 186 GITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 243
           GITVDDVYKACERFE LGVEF KKP+ GK+KG+AFIKDPD YWIEIFDLKTIG    +
Sbjct: 174 GITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTIGTTTVN 231

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  353 bits (907), Expect = e-125
 Identities = 150/180 (83%), Positives = 160/180 (88%)

Query: 61  ASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP 120
            +S  KES ANNPGL    DEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDFP
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 121 EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPR 180
           EMKFSLYFLGYED+ +AP DP +RTVWTFG+ ATIELTHNWGTESDP+FKGYHNGNS+PR
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 181 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           GFGHIGITVDDVYKACERFE+LGVEF KKPD GK+KG+AFIKDPD YWIEIFDLK IG I
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGGI 180

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  215 bits (550), Expect = 1e-71
 Identities = 76/163 (46%), Positives = 88/163 (53%), Gaps = 27/163 (16%)

Query: 78  ARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASA 137
             D  T    +  TM R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  SA
Sbjct: 8   VADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSA 67

Query: 138 PADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACE 197
                          A IELTHNWGTE       Y  GN    GFGHI I VDDVYKACE
Sbjct: 68  ---------------AVIELTHNWGTEK------YDLGN----GFGHIAIGVDDVYKACE 102

Query: 198 RFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIG 238
           R   LG    ++  P  G    +AF++DPD Y IE+   K+  
Sbjct: 103 RVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTK 145

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  202 bits (517), Expect = 4e-67
 Identities = 75/145 (51%), Positives = 88/145 (60%), Gaps = 24/145 (16%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
              TM R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S           
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG--------- 51

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  +ELT+NWGTE     + Y NGN    GFGH+   VDDVY ACER E +GVE  
Sbjct: 52  ------VLELTYNWGTE-----EPYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVT 96

Query: 208 KKPDGGKLKGVAFIKDPDDYWIEIF 232
           K P  G +KG+AFIKDPD YWIE+ 
Sbjct: 97  KPPGDGGMKGIAFIKDPDGYWIELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 94.7 bits (235), Expect = 1e-24
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 31/152 (20%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
           M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------E 45

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 211
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    +  +
Sbjct: 46  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTR--E 93

Query: 212 GGKLKG----VAFIKDPDDYWIEIFDLKTIGK 239
            G +KG    +AF++DPD Y IE+ + K  G+
Sbjct: 94  AGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 125

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 89.0 bits (221), Expect = 1e-22
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 27/143 (18%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
               R+ D + SLDFY+ VLG  L++ +D  E      F                     
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGR--------------- 48

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                +EL  N          G H           I  +VDDV  A +R +  GVE  ++
Sbjct: 49  ----VLELLLNETPPPAAAGFGGH-------HIAFIAFSVDDVDAAYDRLKAAGVEIVRE 97

Query: 210 P-DGGKLKGVAFIKDPDDYWIEI 231
           P   G     ++ +DPD   IE+
Sbjct: 98  PGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 33/149 (22%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDTASAPADPVDRT 145
           M   ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+           
Sbjct: 25  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFV-------- 76

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                    +ELT+N+G +       Y  G     GFGH GI V+DV K  E  +  G +
Sbjct: 77  ---------VELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVELVKAKGGK 117

Query: 206 FAKKP---DGGKLKGVAFIKDPDDYWIEI 231
             ++P    GGK   +AF+KDPD Y  E+
Sbjct: 118 VTREPGPVKGGKSV-IAFVKDPDGYKFEL 145

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 72.9 bits (179), Expect = 3e-15
 Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 36/149 (24%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
           Q M R+ D   S+ FY +  GM LL++ D PE K+++  +GY      P D         
Sbjct: 157 QVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY-----GPED--------- 202

Query: 150 GKPATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 208
            K   +ELT+N+G TE       Y  GN     +  I I  DDVYK  E  + +G +  +
Sbjct: 203 -KTTVLELTYNYGVTE-------YTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITR 250

Query: 209 KPDGGKLKGV-----AFIKDPDDYWIEIF 232
           +P  G L G+     A + DPD  W  +F
Sbjct: 251 EP--GPLPGINTKITACL-DPDG-WKTVF 275

Length = 286

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 65.9 bits (160), Expect = 9e-14
 Identities = 31/145 (21%), Positives = 46/145 (31%), Gaps = 16/145 (11%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
                + D + S+DFY+ VLG+ L+K           Y L + D    P + +      F
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAF----F 60

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF 206
           G                              G GH+   VDD      A    +  GV  
Sbjct: 61  GFEGRAGTGFVGDVALGVP--------GGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRI 112

Query: 207 AKKPDGGKLKGVAFIKDPDDYWIEI 231
                 G+     + +DPD   IE+
Sbjct: 113 ELGEP-GRGGVHVYFRDPDGILIEL 136

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 63.6 bits (155), Expect = 3e-13
 Identities = 36/143 (25%), Positives = 49/143 (34%), Gaps = 34/143 (23%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
                + D + ++ FY  VLG  +L+R           FL    T               
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGT--------------- 42

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                +EL           F+G         G  H+   VDDV  A ER +  GVE    
Sbjct: 43  ----RLEL-----------FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGG 87

Query: 210 PDGGKLKG-VAFIKDPDDYWIEI 231
           P      G VA+ +DPD   IE+
Sbjct: 88  PREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 54.8 bits (132), Expect = 6e-10
 Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 39/144 (27%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D + +  FY  +LG  +                                    G+ 
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--------------------------------EEEDGEY 28

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
           A   L          +  G    ++   G  H+   VDD+     R +  G    + P  
Sbjct: 29  AEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPED 88

Query: 211 --DGGKLKGVAFIKDPDDYWIEIF 232
              GG+     +++DPD   IE+ 
Sbjct: 89  TPWGGR---EFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 35/142 (24%), Positives = 46/142 (32%), Gaps = 36/142 (25%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW-TFGK 151
            R+ D + S  FY+ VLG+    R  F        F G                W   G 
Sbjct: 6   LRVPDLEASRAFYTDVLGLEEGPRPPFL-------FPGA---------------WLYAGD 43

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 211
              + L      E  PD      G        HI   VDD+     R +  GV +     
Sbjct: 44  GPQLHL----IEEDPPDALPEGPGR-----DDHIAFRVDDLDAFRARLKAAGVPY--TES 92

Query: 212 GGKLKGVA--FIKDPDDYWIEI 231
                GV   F++DPD   IE+
Sbjct: 93  DVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 31/136 (22%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 154
            D + +L FY  VLG+   +R + P E    L FLG  +                     
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNV-------------------Q 49

Query: 155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA----KKP 210
           IEL      + D     +     E  G  HI   VDD+  A  R +  GV       +  
Sbjct: 50  IELIE--PLDDDSPIAKFLEKRGE--GLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIG 105

Query: 211 DGGKLKGVAFIKDPDD 226
            GGK   VAF+  P D
Sbjct: 106 AGGKR--VAFL-HPKD 118

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 30/139 (21%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPAD-PVDRTVWTFGK 151
           F++ +   ++ FY  VLGM +L+  +F E        G +   + P D    +T+  +G 
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEE--------GCKAACNGPYDGKWSKTMIGYGP 59

Query: 152 PAT---IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 208
                 +ELT+N+G         Y  GN     F  I I         ++          
Sbjct: 60  EDDHFVVELTYNYGIGD------YELGND----FLGITIHSKQAVSNAKKHNW------- 102

Query: 209 KPDGGKLKGVAFIKDPDDY 227
            P      GV  +K P  Y
Sbjct: 103 -PVTEVEDGVYEVKAPGGY 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 32/136 (23%), Positives = 39/136 (28%), Gaps = 30/136 (22%)

Query: 89  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 148
                 + D   +  F+  +LG                  LG           VD     
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLG------------------LGPWGDYRDEPQNVDLAFAR 42

Query: 149 FG--KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF 206
            G      +EL      ES  D  G         G  HI   VDD+  A  R E  GV  
Sbjct: 43  LGDGPAVEVELIQPLDGESFLDKGGP--------GLHHIAYWVDDLDAAVARLEAQGVRV 94

Query: 207 AKKP--DGGKLKGVAF 220
           A K    G   + VAF
Sbjct: 95  APKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 26/139 (18%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 155
           +D + ++DFY+ VLG+ L+K+    +     Y L + D   +P   +  T + +      
Sbjct: 10  RDAQETVDFYTDVLGLRLVKKTVNQD-DPGTYHLFFGDGLGSPGTLL--TFFEWP----- 61

Query: 156 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 212
                     D   KG       P    HI  +V     +    ER    GV  +   D 
Sbjct: 62  ----------DAGPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGVVDR 107

Query: 213 GKLKGVAFIKDPDDYWIEI 231
              + + F +DPD   +E+
Sbjct: 108 FGERSLYF-EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 174 NGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDD 226
              +   G  H+G+ VD   +V +A  R E  G+   K+ D          V ++ DPD 
Sbjct: 51  RPGAPGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKV-WVTDPDG 109

Query: 227 YWIEIF 232
              E+F
Sbjct: 110 NAWEVF 115

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
PLN02367	233	lactoylglutathione lyase	100.0
PLN03042	185	Lactoylglutathione lyase; Provisional	99.97
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.96
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.86
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.85
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.84
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.84
PRK10291	129	glyoxalase I; Provisional	99.84
PRK11478	129	putative lyase; Provisional	99.83
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.83
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.82
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.82
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.81
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.79
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.78
PLN02300	286	lactoylglutathione lyase	99.78
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.78
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.77
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.76
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.76
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.75
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.75
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.75
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.75
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.74
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.74
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.74
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.73
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.73
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.73
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.73
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.72
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.72
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.72
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.72
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.72
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.71
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.71
PLN02300	286	lactoylglutathione lyase	99.71
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.71
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.71
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.71
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.71
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.7
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.7
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.7
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.7
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.7
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.69
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.69
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.68
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.68
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.68
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.67
PRK06724	128	hypothetical protein; Provisional	99.67
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.67
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.66
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.66
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.66
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.66
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.65
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.65
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.64
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.64
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.64
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.64
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.64
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.64
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.63
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.62
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.6
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.59
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.58
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.57
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.54
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.53
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.49
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.49
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.44
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.39
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.29
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.28
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.13
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.12
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.12
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.1
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.07
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.05
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.03
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.89
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.72
PRK10148	147	hypothetical protein; Provisional	98.32
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.27
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.24
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.21
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.0
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.87
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.67
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.79
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.72
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.99
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.91
PF15067	236	FAM124: FAM124 family	95.5
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	95.16
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	93.7
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	92.16
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	92.15
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	91.84
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	91.73
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	91.14
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	90.14
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	88.68
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	88.51
PLN02367	233	lactoylglutathione lyase	87.89
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	87.67
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	87.43
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	87.37
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	87.28
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	86.49
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	85.79
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	85.65
PRK11478	129	putative lyase; Provisional	85.14
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	84.84
PRK10291	129	glyoxalase I; Provisional	83.9
PLN03042	185	Lactoylglutathione lyase; Provisional	83.69
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	83.58
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	82.89
PRK11700	187	hypothetical protein; Provisional	82.74
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	82.64
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	82.64
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	82.36
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	81.98
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	81.41
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	81.08
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	80.17

>PLN02367 lactoylglutathione lyase

Probab=100.00  E-value=1e-40  Score=280.37  Aligned_cols=231  Identities=74%  Similarity=1.162  Sum_probs=196.1

Q ss_pred             ceecccccccccceeeccCCCCCCcCCCCcccccccccccccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCc
Q 026024            6 SISCSTSLSRLSIFSRLTSSTRPLFLSPSSLPFFSSTKTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNG   85 (244)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (244)
                      +|+++|++||||+++++. ++ +++.|+....+.+    .++..|.++|+|..+|+ +.|+......+|.+..+++.|.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~   73 (233)
T PLN02367          1 SYSIATAISRLSPLILIV-KP-YSSGSSFITCFCN----STRKPKRFDRLRVFSMA-SEPKESPANNPGLSTSPDEATKG   73 (233)
T ss_pred             CchhhhhhhhccceEEec-CC-cccCCcceeeccc----cccccccccceeeeccc-cCCccCcccCcccccCCCCCCCC
Confidence            578899999999999998 66 5555555333333    34556888888888887 67888888899999999999999


Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +.++|++|+|+|++++++||+++|||++..+.+.+++++.++|+++++....+.+..++..|.+.+...|||+++++.+.
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            99999999999999999999999999999999888888999999986655556566678899998888999999888765


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCCCCCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS  243 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~~~~~~  243 (244)
                      ++.+..|..|+..+.|++||+|.|+|+++++++|+++|+++...|..+.+.+++||+|||||+|||+|...+.+++.+
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~~~~~~~~  231 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTIGTTTVN  231 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecccccccccc
Confidence            444555888887778999999999999999999999999999988777766789999999999999999988876643

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.97  E-value=1.3e-28  Score=202.55  Aligned_cols=179  Identities=83%  Similarity=1.395  Sum_probs=143.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCcc
Q 026024           64 EPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD  143 (244)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  143 (244)
                      ..+.++...+|.+.+++..|.+++++|++|+|+|+++|++||+++|||++..+...++..+.++|+++++....|.+...
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~   83 (185)
T PLN03042          4 ASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPE   83 (185)
T ss_pred             CCcCCcccCcccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhh
Confidence            34555666888999999999999999999999999999999999999999988777777788999987543333444445


Q ss_pred             ceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEEC
Q 026024          144 RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKD  223 (244)
Q Consensus       144 ~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~D  223 (244)
                      ...|.+.+...|||+++.+....+....+..++..+.|+.||+|.|+|+++++++|+++|+++...+..+...+++||+|
T Consensus        84 ~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~D  163 (185)
T PLN03042         84 RTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKD  163 (185)
T ss_pred             cccccccCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEEC
Confidence            67788888899999986554322211124444433458999999999999999999999999998776554456788999


Q ss_pred             CCCCEEEEEecCCCCCCCC
Q 026024          224 PDDYWIEIFDLKTIGKIGG  242 (244)
Q Consensus       224 PdG~~IEi~e~~~~~~~~~  242 (244)
                      ||||+|||++.++++.+++
T Consensus       164 PdG~~IEl~e~~~~~~~~~  182 (185)
T PLN03042        164 PDGYWIEIFDLKRIGGITA  182 (185)
T ss_pred             CCCCEEEEEECCCchhhcc
Confidence            9999999999999998875

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3.9e-29  Score=194.48  Aligned_cols=166  Identities=54%  Similarity=0.887  Sum_probs=149.2

Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeee
Q 026024           69 PANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT  148 (244)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  148 (244)
                      ++.+.+.....+..+.++.++|++++|+|+.+++.||++++|+.+.....+++..|..+|++++....+|.....+..|.
T Consensus         4 ~~~~~~l~~~~~~~~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~   83 (170)
T KOG2944|consen    4 DANALGLFSRADSSTPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFV   83 (170)
T ss_pred             cccchhhhcccCCCCchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEE
Confidence            34456667777778899999999999999999999999999999998888888888899999987777888888788999


Q ss_pred             cCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCE
Q 026024          149 FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYW  228 (244)
Q Consensus       149 ~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~  228 (244)
                      +.++..+||.++|+++.++ ...|.+||..|+|++||||.|+|++.++++++++|+++...+.+|.+..++|+.|||||+
T Consensus        84 ~~~~~~~ELthn~Gtes~~-~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgyw  162 (170)
T KOG2944|consen   84 FSRNAKLELTHNWGTESPP-DQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYW  162 (170)
T ss_pred             ecccCceeeecCCCCCCCc-chhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCe
Confidence            9999999999999998766 334899999999999999999999999999999999999999999998899999999999


Q ss_pred             EEEEecC
Q 026024          229 IEIFDLK  235 (244)
Q Consensus       229 IEi~e~~  235 (244)
                      |||..+.
T Consensus       163 iei~~~s  169 (170)
T KOG2944|consen  163 IEIELES  169 (170)
T ss_pred             EEEeecC
Confidence            9998753

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.86  E-value=3.7e-20  Score=147.16  Aligned_cols=135  Identities=54%  Similarity=0.910  Sum_probs=98.8

Q ss_pred             CCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        80 ~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      +|-+..++++|+.|.|.|++++++||+++|||++..+...++..+..++++.++..               ....+++..
T Consensus        10 ~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~   74 (150)
T TIGR00068        10 DPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET---------------SAAVIELTH   74 (150)
T ss_pred             CcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCC---------------CccEEEEee
Confidence            45588999999999999999999999999999998765545544555666643210               034456543


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC--CCCcceEEEEECCCCCEEEEEecCCC
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~--~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      .+....      ...+    .+..|++|.|+|+++++++|+++|+++..++.  .+.....+||+|||||+|||++....
T Consensus        75 ~~~~~~------~~~~----~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        75 NWGTEK------YDLG----NGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             cCCCCc------ccCC----CceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            322211      1111    26789999999999999999999999887663  23334578899999999999998765


Q ss_pred             CC
Q 026024          238 GK  239 (244)
Q Consensus       238 ~~  239 (244)
                      ++
T Consensus       145 ~~  146 (150)
T TIGR00068       145 KD  146 (150)
T ss_pred             hh
Confidence            44

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=4.6e-20  Score=142.99  Aligned_cols=115  Identities=29%  Similarity=0.497  Sum_probs=87.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----------CcEEEEEeecCCCCCCCCCCccceeeecCCCcE
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  154 (244)
                      .++.|++|.|+|+++|++||+++|||++..+.+.++           +.+..+++++.+..               .+..
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~---------------~~~~   65 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPED---------------DHFV   65 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCC---------------CccE
Confidence            368999999999999999999999999988776654           45555666643110               1568


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       155 leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      |||+++++...      +..|.    +  |++|.|+++ ++.++|+++|+++...+.     +++|++||||+.|||+.
T Consensus        66 lEL~~n~~~~~------~~~g~----~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          66 VELTYNYGIGD------YELGN----D--FLGITIHSK-QAVSNAKKHNWPVTEVED-----GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             EEeEecCCCCC------CCCCC----C--EEEEEEECH-HHHHHHHHCCCceecCCC-----CEEEEECCCCCEEEEec
Confidence            99988765432      44332    3  677777776 556999999999987664     27899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=9.2e-20  Score=142.89  Aligned_cols=128  Identities=17%  Similarity=0.286  Sum_probs=89.2

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----------CcEEEEEeecCCCCCCCCCCccceeeecCCCcE
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  154 (244)
                      .+++|++|.|+|++++++||++ |||++..+...++           ....+.++...                 .+...
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------~g~~~   63 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP-----------------DGHSR   63 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC-----------------CCCce
Confidence            4789999999999999999998 9999876543221           11223333221                 12568


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEEEEe
Q 026024          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       155 leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IEi~e  233 (244)
                      |||+....+....... ...  ....|+.||+|.|+|+++++++|+++|+++..++... ...+.+|++|||||.|||+|
T Consensus        64 iel~~~~~~~~~~~~~-~~~--~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          64 LELSKFHHPAVIADHR-PAP--VNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             EEEEEecCCCCcCcCC-CCC--CCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            8988643332211100 101  1124788999999999999999999999998765432 23467899999999999998


Q ss_pred             c
Q 026024          234 L  234 (244)
Q Consensus       234 ~  234 (244)
                      .
T Consensus       141 ~  141 (142)
T cd08353         141 Q  141 (142)
T ss_pred             c
Confidence            4

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.84  E-value=2.1e-19  Score=136.27  Aligned_cols=121  Identities=60%  Similarity=1.107  Sum_probs=90.6

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      |+|++|.|+|++++++||+++|||++..+...++..+..+++..++..               .+..+++........  
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~l~~~~~~~~--   63 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDED---------------SEGVLELTYNWGTEE--   63 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCC---------------CccEEEEEecCCCCC--
Confidence            579999999999999999999999998776544445556667653210               145677754322211  


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                         +...+    .+..|++|.|+|+++++++++++|+++..++.....++.+|++|||||+|||+
T Consensus        64 ---~~~~~----~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          64 ---PYDNG----NGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             ---CcCCC----CCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence               11112    26689999999999999999999999998886555556789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PRK10291 glyoxalase I; Provisional

Probab=99.84  E-value=2e-19  Score=139.01  Aligned_cols=121  Identities=41%  Similarity=0.755  Sum_probs=88.1

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCC
Q 026024           92 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  171 (244)
Q Consensus        92 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~  171 (244)
                      +|.|+|++++++||+++|||++..+...++..+.+++++.++..               ....+++...+...      +
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~------~   59 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVD------K   59 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCC---------------CcceEEeeecCCCC------C
Confidence            48899999999999999999998776555555667777653211               13456665433211      1


Q ss_pred             CCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecCCC
Q 026024          172 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       172 ~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      +..+    .+++|++|.|+|+++++++|+++|+++..++.....  ..++||+|||||.|||++.+..
T Consensus        60 ~~~g----~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         60 YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             CcCC----CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            2222    267899999999999999999999998865532222  2467899999999999997653

>PRK11478 putative lyase; Provisional

Probab=99.83  E-value=3.1e-19  Score=137.25  Aligned_cols=124  Identities=23%  Similarity=0.269  Sum_probs=84.9

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..+++|++|.|+|++++++||+++|||++..+...++ ..+... +..+                  ++..++|+....+
T Consensus         4 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~------------------~~~~l~l~~~~~~   64 (129)
T PRK11478          4 LKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGD-LALN------------------GQYVIELFSFPFP   64 (129)
T ss_pred             cceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceee-EecC------------------CCcEEEEEEecCC
Confidence            3568999999999999999999999999865422111 122111 1111                  1467777653222


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEEEEec
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ...+       ......|+.||+|.|+|+++++++|+++|+++....... ....++||+|||||.|||+|.
T Consensus        65 ~~~~-------~~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         65 PERP-------SRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             CCCC-------CCCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence            2111       011123778999999999999999999999987543222 224578999999999999973

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=2.8e-19  Score=136.01  Aligned_cols=121  Identities=25%  Similarity=0.359  Sum_probs=84.5

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +++|++|.|+|++++++||+++|||++......+...+..+|+..++                  +..++|+........
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~~~~~   62 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD------------------GARLELMTRPDIAPS   62 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC------------------CcEEEEEcCcccCCC
Confidence            47899999999999999999999999865543333334445554422                  456777643221110


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                      .    .   .....|+.|++|.|+   |+++++++|+++|+++...+.....+ ..++++|||||.|||.
T Consensus        63 ~----~---~~~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          63 P----N---EGERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             c----c---cCCCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence            0    0   111247889999995   58999999999999998866433222 3467899999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.82  E-value=4.3e-19  Score=143.22  Aligned_cols=128  Identities=20%  Similarity=0.194  Sum_probs=87.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeC--C----------------CCcEEEEEeecCCCCCCCCCCccceee
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF--P----------------EMKFSLYFLGYEDTASAPADPVDRTVW  147 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~--~----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~  147 (244)
                      .+++||+|.|+|+++|++||+++|||++..+...  +                ...+.+.++..+               
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------   67 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTG---------------   67 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecC---------------
Confidence            4689999999999999999999999988643110  0                011333444322               


Q ss_pred             ecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC-C---CCC-cceEEEEE
Q 026024          148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-D---GGK-LKGVAFIK  222 (244)
Q Consensus       148 ~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p-~---~g~-~~~~~~~~  222 (244)
                         ++..|+|+....... +    .........|+.||+|.|+|+++++++++++|+++...+ .   .+. ..+.+|++
T Consensus        68 ---~~~~ieL~~~~~~~~-~----~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~  139 (162)
T TIGR03645        68 ---DRIGVELFEFKNQEN-P----EDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYME  139 (162)
T ss_pred             ---CCCcEEEEeccCCCC-C----CcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEE
Confidence               245689887543322 1    110001124789999999999999999999998764422 1   111 12578999


Q ss_pred             CCCCCEEEEEecCC
Q 026024          223 DPDDYWIEIFDLKT  236 (244)
Q Consensus       223 DPdG~~IEi~e~~~  236 (244)
                      |||||.|||+++..
T Consensus       140 DPdG~~iEl~~~~~  153 (162)
T TIGR03645       140 DPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCEEEEEEcCh
Confidence            99999999999854

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.82  E-value=3.7e-19  Score=139.15  Aligned_cols=128  Identities=19%  Similarity=0.202  Sum_probs=90.2

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      ++|+.|.|.|++++++||+++|||++..+...++  ....++..+                   ...++|........ .
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g-------------------~~~l~l~~~~~~~~-~   58 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQG-------------------DINFVLNSPLNSFA-P   58 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcC-------------------CEEEEEecCCCCCC-c
Confidence            5899999999999999999999999987643221  223333321                   34566643211111 0


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEecCCCCCC
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKTIGKI  240 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e~~~~~~~  240 (244)
                       ...+.  ...+.+..|++|.|+|+++++++|+++|++++.+|...++ .+.+|++|||||+|||++++..+..
T Consensus        59 -~~~~~--~~~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~~~~  129 (136)
T cd08342          59 -VADFL--EKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGYKGP  129 (136)
T ss_pred             -hHHHH--HhcCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCCCCc
Confidence             00000  0012377899999999999999999999999988876333 3588999999999999998776543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.7e-18  Score=131.31  Aligned_cols=122  Identities=23%  Similarity=0.350  Sum_probs=85.3

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+++|++|.|.|++++++||+++|||++......++ ..+.+ .+...                  ....++|+......
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~i~l~~~~~~~   62 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLN------------------GGYQLELFSFPNPP   62 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecC------------------CCcEEEEEEcCCCC
Confidence            468999999999999999999999999876543222 22322 22211                  14567765432211


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEe
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e  233 (244)
                      ...    .   .....|..|++|.|+|+++++++++++|+++...+..... ...+|++||+||.|||+|
T Consensus        63 ~~~----~---~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          63 ERP----S---YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCC----C---CCcCCCceEEEEEeCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            100    0   1112377899999999999999999999998876643332 347899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=8.4e-18  Score=132.89  Aligned_cols=116  Identities=18%  Similarity=0.207  Sum_probs=81.8

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCc-EEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..+|+|++|.|+|++++++||+++|||++..+...+++. ....|+..+.                 ..+.+.+...  +
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~-----------------~~h~~~~~~~--~   64 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN-----------------KPHDIAFVGG--P   64 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC-----------------CcceEEEecC--C
Confidence            467999999999999999999999999987665322222 1233443221                 1334444211  0


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHHHHHHCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEec
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~rl~~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~  234 (244)
                                     ..+++|++|.|+|+++   ++++|+++|+++...|.. +. .+..+||+|||||.|||++.
T Consensus        65 ---------------~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          65 ---------------DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             ---------------CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence                           1267899999998777   678999999998766532 21 23568999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.78  E-value=1.4e-18  Score=132.95  Aligned_cols=124  Identities=27%  Similarity=0.418  Sum_probs=86.6

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +++|+.|.|+|++++++||+++|||++......++..+..+++..+                   ...++|........ 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~i~l~~~~~~~~-   60 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-------------------NTKVELLEPLGEDS-   60 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-------------------CEEEEEEecCCCCC-
Confidence            4789999999999999999999999987654333333445555432                   35677764322211 


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEec-CCCCCcc-eEEEE--ECCCCCEEEEEe
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFD  233 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~-p~~g~~~-~~~~~--~DPdG~~IEi~e  233 (244)
                      . ...+....  ..|..|++|.|+|+++++++|+++|+++..+ +..+.++ +.+|+  +|||||+|||+|
T Consensus        61 ~-~~~~~~~~--~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        61 P-IAKFLEKN--GGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             h-HHHHHhcC--CCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            0 00011111  2377899999999999999999999999864 5555444 45566  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PLN02300 lactoylglutathione lyase

Probab=99.78  E-value=1.3e-17  Score=146.32  Aligned_cols=129  Identities=36%  Similarity=0.647  Sum_probs=95.4

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ....+++|++|.|+|++++++||+++|||++..+...++..+...+++.+...               .+..+++....+
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~   84 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SNFVVELTYNYG   84 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCC---------------CceEEEEeccCC
Confidence            44678999999999999999999999999998765555555556666543210               135667754322


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ...      +..+    .|+.|++|.|+|+++++++++++|+++...+...+.  ...+||+|||||.|||+++..
T Consensus        85 ~~~------~~~~----~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300         85 VDK------YDIG----TGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             CCc------cccC----CCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            211      2122    377899999999999999999999999877643322  246799999999999999754

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.78  E-value=3.1e-18  Score=136.86  Aligned_cols=120  Identities=17%  Similarity=0.224  Sum_probs=82.4

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +++||+|.|+|++++++||+++|||++..+...+ .......|+..++.....            .++.+.+...     
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------~~~~~~l~~~-----   63 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYV------------DHHTLALAQG-----   63 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcc------------cchHHHHhcC-----
Confidence            4789999999999999999999999987664433 122345555542210000            0111222110     


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHH---HHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~---~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~  235 (244)
                                  ...|++||||.|+|++++.   ++|+++|+++...+.....  ..++|++|||||.|||+...
T Consensus        64 ------------~~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          64 ------------PESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             ------------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence                        0137899999999999986   9999999999876633222  23679999999999999754

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.5e-17  Score=126.73  Aligned_cols=117  Identities=18%  Similarity=0.239  Sum_probs=78.4

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |++.|+.|.|+|++++++||+++|||++.....  .  + ..+.+                     ...+.+...+....
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~---------------------~~~l~~~~~~~~~~   54 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTFEG---------------------GFALQEGYSWLEGI   54 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEEec---------------------cceeccchhhhccC
Confidence            578999999999999999999999999875321  1  1 11211                     11111111010000


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCC-eEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV-EFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv-~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      ...  +...    +.+..|++|.|+|+++++++|+++|+ ++..++...+++ +.+||+|||||+|||.+.
T Consensus        55 ~~~--~~~~----~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          55 SKA--DIIE----KSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             Ccc--cccc----cCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            000  0011    12446999999999999999999985 787777655554 589999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.76  E-value=2.1e-17  Score=132.21  Aligned_cols=120  Identities=21%  Similarity=0.314  Sum_probs=86.1

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC---CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      |+.++|+|++|.|+|++++++||+++|||++..+...+   +......|+..++                 .++.+.+..
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~i~~~~   67 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG-----------------RHHSLALAE   67 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC-----------------CCCCEEEEc
Confidence            77899999999999999999999999999987653321   1123345554322                 134455532


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHH---HHHHHHHHCCCeEEecCCCCC--cceEEEEECCCCCEEEEEec
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd---~~~~rl~~~Gv~v~~~p~~g~--~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ...                +.+++||+|.|+|++   +++++|+++|+++...+....  ....+|++|||||.|||...
T Consensus        68 ~~~----------------~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          68 GPG----------------PKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             CCC----------------CceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            100                127889999998654   689999999999987664322  23468999999999999875


Q ss_pred             C
Q 026024          235 K  235 (244)
Q Consensus       235 ~  235 (244)
                      .
T Consensus       132 ~  132 (154)
T cd07237         132 G  132 (154)
T ss_pred             c
Confidence            3

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.2e-17  Score=122.48  Aligned_cols=119  Identities=19%  Similarity=0.314  Sum_probs=83.7

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      |++|.|.|++++++||+++|||++..+....+ ....+++...+.                ....+++........ .  
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~----------------~~~~l~~~~~~~~~~-~--   60 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS----------------PETSLVLAPPANPAA-M--   60 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC----------------CeeEEEEeCCCCccc-c--
Confidence            89999999999999999999999987754222 223334432210                023455543221111 0  


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      . .    ..+.+..|++|.|+|+++++++++++|+++..++.....+..+|++|||||.|||+|
T Consensus        61 ~-~----~~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          61 S-G----LQPGGTPGLVLATDDIDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             c-c----ccCCCceEEEEEehHHHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            0 0    112367799999999999999999999999988854455678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=5.1e-17  Score=124.02  Aligned_cols=114  Identities=22%  Similarity=0.291  Sum_probs=81.1

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++.....  ++.   .++...+.               ..++.+.+..  .. 
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~~---~~~~~~~~---------------~~~~~~~l~~--~~-   58 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QGR---VYLKAWDE---------------FDHHSIVLRE--AD-   58 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cce---EEEEccCC---------------CcccEEEecc--CC-
Confidence            4789999999999999999999999999876531  211   22322110               0133444421  00 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC--CCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~--g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                    ..++.|++|.|+   |+++++++++++|+++...+..  ...+..+||+|||||.|||+...
T Consensus        59 --------------~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          59 --------------TAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             --------------CCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence                          015689999997   8999999999999998875532  22245789999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.75  E-value=5.6e-17  Score=124.30  Aligned_cols=111  Identities=18%  Similarity=0.333  Sum_probs=80.5

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|+++|++||+++|||++....    +.+....++  .                  +..+++...  ..
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~------------------~~~l~~~~~--~~   55 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N------------------GVSLDFAQP--DG   55 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C------------------CcEEEEecC--CC
Confidence            478999999999999999999999999987632    112111111  1                  345555321  00


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCC--------CcceEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG--------KLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g--------~~~~~~~~~DPdG~~IEi~e~  234 (244)
                              .      .+..|++|.|+  |+++++++++++|+++...+...        ..++.+||+|||||.|||++.
T Consensus        56 --------~------~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          56 --------E------IPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             --------C------CCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence                    0      13469999997  69999999999999987765321        234579999999999999986


Q ss_pred             C
Q 026024          235 K  235 (244)
Q Consensus       235 ~  235 (244)
                      .
T Consensus       122 ~  122 (123)
T cd08351         122 P  122 (123)
T ss_pred             c
Confidence            3

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.75  E-value=6.6e-17  Score=121.61  Aligned_cols=113  Identities=19%  Similarity=0.152  Sum_probs=80.6

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      +.|+.|.|+|++++++||+++|||++..... +...+  .++..++                  ...+.+.......   
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~------------------~~~~~~~~~~~~~---   56 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG------------------GAVGGLMKAPEPA---   56 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC------------------ccEEEEecCCCCC---
Confidence            3699999999999999999999999876542 12233  2333221                  2334443221110   


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCCCCEEEEEe
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e  233 (244)
                               ....+..|++|.|+|+++++++|+++|+++..++...+ .+..+|++|||||.|||+|
T Consensus        57 ---------~~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          57 ---------AGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             ---------CCCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence                     00124469999999999999999999999998875544 4467999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.75  E-value=8.5e-17  Score=129.55  Aligned_cols=116  Identities=19%  Similarity=0.302  Sum_probs=79.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      ++|+|++|.|+|++++++||+++|||++......+.+.....++....                 ..+.+.+...  .  
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~i~l~~~--~--   60 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG-----------------GVHDTALTGG--N--   60 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC-----------------CcceEEEecC--C--
Confidence            689999999999999999999999999875543222222233443211                 1334444211  0  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeE--EecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF--AKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v--~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                               +    .++.|++|.|+|   +++++++|+++|+..  ...+.. +. ....+|++|||||.|||++..
T Consensus        61 ---------~----~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          61 ---------G----PRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             ---------C----CceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence                     0    267899999985   888899999999863  233321 21 123689999999999998744

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.5e-16  Score=121.50  Aligned_cols=118  Identities=24%  Similarity=0.375  Sum_probs=83.9

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|+.|.|+|++++.+||+++|||++....   + .  .++++.++.                 ...|.+........
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~-----------------~~~l~l~~~~~~~~   57 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGK-----------------RPLLVLEEDPDAPP   57 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCC-----------------eEEEEEEeCCCCCc
Confidence            68999999999999999999999999998762   1 1  234443210                 34566644322110


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                       .    ..    ...+..|++|.|+   |+++++++++++|+++..... ......+|++|||||.|||.....
T Consensus        58 -~----~~----~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          58 -A----PP----GATGLYHFAILLPSRADLAAALRRLIELGIPLVGASD-HLVSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             -c----cC----CCCcEEEEEEECCCHHHHHHHHHHHHHcCCceecccc-ccceeEEEEECCCCCEEEEEEecC
Confidence             0    11    1136789999997   599999999999998765432 233456899999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.74  E-value=9.3e-17  Score=129.00  Aligned_cols=118  Identities=15%  Similarity=0.197  Sum_probs=83.4

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      ++||+|.|+|++++++||+++|||++..+..   ..  ..+...+..                .+..|++........  
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~--~~~~~~~~~----------------~~~~l~l~~~~~~~~--   58 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DR--VRLEEGGGG----------------PGAVVDVLEEPDQPR--   58 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CE--EEEEecCCC----------------CCCEEEEEeCCCCCC--
Confidence            6899999999999999999999999987643   12  222222100                156788865321110  


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                          ...   ...++.||+|.|+|   +++++++|+++|+++.... +....+.+||+|||||.|||+....
T Consensus        59 ----~~~---~~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~~~-~~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          59 ----GRP---GAGTVHHVAFRVPDDEELEAWKERLEALGLPVSGIV-DRFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             ----Ccc---cCCceEEEEEECCCHHHHHHHHHHHHHCCCCccccc-ccccEEEEEEECCCCcEEEEEECCC
Confidence                001   11367899999998   9999999999999864433 2233457899999999999999753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.74  E-value=1.5e-16  Score=123.91  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=81.7

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|++|.|+|++++++||+++|||++..+..  .   ...|+..++..               .++.+.+......  
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~---------------~~~~i~l~~~~~~--   59 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGG---------------DHHNLFLIKTPAP--   59 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCC---------------CCcEEEEecCCCC--
Confidence            478999999999999999999999999876532  1   13344432100               1456666432110  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHH---HHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~---~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~  235 (244)
                                   ..|++||+|.|+|++++.   ++|+++|+++...+...+.  ...+||+|||||.|||....
T Consensus        60 -------------~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          60 -------------MAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             -------------CCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence                         127899999999887766   5999999998765533222  23589999999999999743

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=6.1e-17  Score=120.16  Aligned_cols=114  Identities=25%  Similarity=0.326  Sum_probs=81.0

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      |+|++|.|+|++++++||+++|||++..+...+.   ...++..++                  ...+++......... 
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~------------------~~~i~l~~~~~~~~~-   58 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD------------------GPQLHLIEEDPPDAL-   58 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC------------------CcEEEEEecCCCccc-
Confidence            5799999999999999999999999876543221   112332211                  235666543222110 


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEE
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  231 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi  231 (244)
                          .    ....+..|++|.|+|+++++++++++|+++...+........+|++|||||.|||
T Consensus        59 ----~----~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          59 ----P----EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             ----c----CCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence                0    0112567999999999999999999999998877543444578999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.73  E-value=1.1e-16  Score=121.78  Aligned_cols=122  Identities=20%  Similarity=0.276  Sum_probs=82.7

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC-cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +++|++|.|+|++++++||+++|||++..+....+. .....++.....               ..+..|+|........
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLG---------------SPGTLLTFFEWPDAGP   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCC---------------CCCCEEEEEecCCCCC
Confidence            368999999999999999999999998876542221 111223322100               0145677765322211


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                       .       ......+..|++|.|+   |+++++++++++|+++...+.. ...+.+|++|||||+|||+
T Consensus        66 -~-------~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          66 -K-------GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH-FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             -C-------CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee-cceEEEEEECCCCCEEEeC
Confidence             0       0111236789999998   5799999999999998765432 2345789999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.9e-16  Score=120.74  Aligned_cols=122  Identities=21%  Similarity=0.301  Sum_probs=77.6

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC-
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD-  166 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~-  166 (244)
                      +.|+.|.|+|++++.+||+++|||++.....  +..+..  +..+                   ...+.+......... 
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~   57 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG-------------------ETTLAFASHDLAESNL   57 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC-------------------cEEEEEEccccccccc
Confidence            4699999999999999999999999865422  222211  1110                   122222211000000 


Q ss_pred             C-CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          167 P-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       167 ~-~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      + ...+ ......+ +..|++|.|+|+++++++++++|+++..++...+++ +.++++|||||.|||+++
T Consensus        58 ~~~~~~-~~~~~~~-~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          58 KGGFVK-ADPAQPP-AGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             ccCccC-CccccCC-CcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            0 0000 0000111 335999999999999999999999998877554443 468899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.73  E-value=1.8e-16  Score=120.93  Aligned_cols=113  Identities=18%  Similarity=0.211  Sum_probs=80.2

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++.+||+++|||++..+..    .  ..++...+..               .++.+.+...  . 
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~---------------~~~~~~l~~~--~-   59 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDY---------------EHHSLKLTES--P-   59 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCC---------------CccEEEEeeC--C-
Confidence            4689999999999999999999999999887632    1  2334321100               1345555321  0 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                    ..|.+|++|.|+   |+++++++++++|+++...+.....+..+|++|||||.||++...
T Consensus        60 --------------~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          60 --------------EAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             --------------CCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence                          026789999997   688999999999998754332222345689999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.73  E-value=1.9e-16  Score=124.17  Aligned_cols=115  Identities=18%  Similarity=0.284  Sum_probs=82.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++..+..      ...++..+                   +..+.+....... 
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~-------------------g~~l~l~~~~~~~-   56 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN-------------------GLWIALNEEKDIP-   56 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC-------------------CeEEEeeccCCCC-
Confidence            468999999999999999999999999875421      12333321                   3345543211110 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                            .  . ....++.|++|.++  |+++++++++++|+++...+.. ...+..+|++|||||+|||.+..
T Consensus        57 ------~--~-~~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         57 ------R--N-EIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ------C--c-cCCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeCC
Confidence                  0  0 01136789999998  9999999999999998765532 23456789999999999999753

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.72  E-value=2e-17  Score=125.59  Aligned_cols=120  Identities=28%  Similarity=0.364  Sum_probs=79.9

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeee--CCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      +|+|++|.|+|++++++||+++|||+++....  .........++..+                   ...+++.......
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   61 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-------------------EGHIELFLNPSPP   61 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-------------------SSCEEEEEEESSS
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-------------------ccceeeeeecccc
Confidence            68999999999999999999999999998765  12233334444433                   3345554433322


Q ss_pred             CCCCCCCCC-CCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcc--eEEEEECCCCCEEEE
Q 026024          165 SDPDFKGYH-NGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEI  231 (244)
Q Consensus       165 ~~~~~~~~~-~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~--~~~~~~DPdG~~IEi  231 (244)
                      .....  .. ..    .+..|+++.+.   |+++++++|++.|+++...+.....+  ..+|++|||||.|||
T Consensus        62 ~~~~~--~~~~~----~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   62 PRASG--HSFPE----HGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SSSEE--EHHHS----HTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             ccccc--ccccc----ccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            21100  00 00    02346666664   78889999999999999887433332  245799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.72  E-value=2.7e-16  Score=138.59  Aligned_cols=153  Identities=19%  Similarity=0.251  Sum_probs=94.8

Q ss_pred             cccccchhhhhhhccCCCC-CCC-CCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcE
Q 026024           47 SWFKASNRFRLLSMASSEP-KES-PANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF  124 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~  124 (244)
                      -+++||.++.++-...... ... ....+.......+.....+++||+|.|+|++++++||+++|||++..+...+++..
T Consensus       103 ~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~  182 (303)
T TIGR03211       103 VRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKE  182 (303)
T ss_pred             EEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcE
Confidence            4689999999884332211 100 00001101111111235689999999999999999999999999876644333321


Q ss_pred             -EEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHH
Q 026024          125 -SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFE  200 (244)
Q Consensus       125 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~  200 (244)
                       ...|+..+..                 .+.+.+...  .              .+.+++||||.|+|   +++++++|+
T Consensus       183 ~~~~~~~~~~~-----------------~~~~~~~~~--~--------------~~g~~~Hiaf~v~~~~~v~~~~~~l~  229 (303)
T TIGR03211       183 QAAAWLSVSNK-----------------AHDIAFVGD--P--------------EPGKLHHVSFFLDSWEDVLKAADVMS  229 (303)
T ss_pred             EEEEEEEcCCC-----------------CcccceecC--C--------------CCCceEEEEEEcCCHHHHHHHHHHHH
Confidence             2334432110                 222322110  0              01137899999986   666888999


Q ss_pred             HCCCeEEecCCC-CC-cceEEEEECCCCCEEEEE
Q 026024          201 RLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       201 ~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~  232 (244)
                      ++|+++...|.. +. .+..+||+|||||.|||.
T Consensus       230 ~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       230 KNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             hCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            999998877643 22 235799999999999998

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=119.17  Aligned_cols=118  Identities=22%  Similarity=0.333  Sum_probs=81.3

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++......+  .+  ..+..+                   ...+++........
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~~~l~~~~~~~~   58 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG-------------------SQKINLHPVGGEFE   58 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC-------------------CEEEEEecCCCccC
Confidence            46899999999999999999999999988654311  11  112211                   24566643221110


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCC-HHHHHHHHHHCCCeEEecCCC--C--CcceEEEEECCCCCEEEEEe
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDG--G--KLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdD-vd~~~~rl~~~Gv~v~~~p~~--g--~~~~~~~~~DPdG~~IEi~e  233 (244)
                       +.  ...    ...|..|++|.+++ +++++++++++|+++...+..  +  ..+..+||+|||||+|||++
T Consensus        59 -~~--~~~----~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          59 -PA--AGS----PGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             -cC--ccC----CCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence             00  011    11367899999975 999999999999998876532  1  12357899999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.72  E-value=6.1e-16  Score=119.88  Aligned_cols=114  Identities=20%  Similarity=0.333  Sum_probs=82.6

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      +|++|.|+|++++++||+++|||++......+ +....+|+..++.                 +..+.+.....      
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~~~------   56 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED-----------------HHDLALFPGPE------   56 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC-----------------cceEEEEcCCC------
Confidence            59999999999999999999999987664433 2233455543221                 34566542110      


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCCHH---HHHHHHHHCCCeEEecCCCCC--cceEEEEECCCCCEEEEEecCC
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdDvd---~~~~rl~~~Gv~v~~~p~~g~--~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                ..++.|++|.|+|++   +++++++++|+++..++....  ....+||+|||||.|||.+...
T Consensus        57 ----------~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          57 ----------RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             ----------CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence                      126789999999764   789999999999987664322  2356899999999999998644

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.72  E-value=2e-16  Score=120.73  Aligned_cols=109  Identities=18%  Similarity=0.232  Sum_probs=78.6

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      ++.|+.|.|+|+++|++||+++|||++..+..  . .  ..++..++                 .++.+.|...  ..  
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~-----------------~~~~~~l~~~--~~--   55 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D-G--ALYLRMDD-----------------RAWRIAVHPG--EA--   55 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC--C-C--eEEEEccC-----------------CceEEEEEeC--CC--
Confidence            57899999999999999999999999865421  1 1  23333221                 1345555321  10  


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCC----CCCcceEEEEECCCCCEEEEEec
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~----~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                   .++.|++|.|+   |+++++++|+++|+++...+.    ....+..+||+|||||.||++..
T Consensus        56 -------------~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          56 -------------DDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             -------------CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence                         15679999997   599999999999999987542    11223578999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=9.8e-16  Score=116.77  Aligned_cols=118  Identities=14%  Similarity=0.148  Sum_probs=80.7

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      ..|.|+|++++++||+++||+++......+++......+..+                   ...+.+..........   
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~~~~---   60 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-------------------DGGVMVGSVRDDYRAS---   60 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-------------------CEEEEEecCCCccccc---
Confidence            468999999999999999999998765333333322333322                   2344443322111100   


Q ss_pred             CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                       . .. ....+..|++|.|+|+++++++++++|+++..++....++ ..++++|||||+|+|.+
T Consensus        61 -~-~~-~~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          61 -S-AR-AGGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             -c-cc-cCCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence             0 00 0112456999999999999999999999999888655444 56889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.71  E-value=3.6e-16  Score=121.47  Aligned_cols=115  Identities=17%  Similarity=0.213  Sum_probs=78.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCc--EEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      .+++|+.|.|+|++++++||+++|||++..+.......  ...++. .                   +...+++...  .
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~i~l~~~--~   60 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-I-------------------GGLWIAIMEG--D   60 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-c-------------------CCeEEEEecC--C
Confidence            36899999999999999999999999876653211000  000111 1                   1345666421  1


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEec
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .       .     ...+.+|++|.|+  |+++++++|+++|+++..+... ...++.+||+|||||.|||...
T Consensus        61 ~-------~-----~~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          61 S-------L-----QERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             C-------C-----CCCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            0       0     0125689999998  7999999999999987654321 1134579999999999999874

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.71  E-value=2.9e-16  Score=137.70  Aligned_cols=129  Identities=32%  Similarity=0.543  Sum_probs=96.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .++.|+.|.|+|++++.+||+++|||++......++..+...++++++..               ....+++....+...
T Consensus       153 ~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lel~~~~~~~~  217 (286)
T PLN02300        153 EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPED---------------KTTVLELTYNYGVTE  217 (286)
T ss_pred             CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCC---------------CccEEEEeecCCCCc
Confidence            46789999999999999999999999998765545555666666543210               134566654332211


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecCCCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKTIGK  239 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~~~~~  239 (244)
                            +..++    +++|++|.|+|+++++++++++|+++..+|...+.  ++.++|+|||||.|+|++...+-+
T Consensus       218 ------~~~g~----~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~  283 (286)
T PLN02300        218 ------YTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLK  283 (286)
T ss_pred             ------cccCC----ceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhh
Confidence                  22232    77899999999999999999999999987754332  357889999999999999877654

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.71  E-value=3.6e-16  Score=136.89  Aligned_cols=153  Identities=19%  Similarity=0.271  Sum_probs=96.9

Q ss_pred             cccccccchhhhhhhccCCCC-CCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--C
Q 026024           45 TTSWFKASNRFRLLSMASSEP-KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--E  121 (244)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~  121 (244)
                      ..-|++||.+++++-...... ...+...+.....  ..+...+|+|++|.|+|++++++||+++|||++..+...+  +
T Consensus       101 ~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~  178 (286)
T TIGR03213       101 GLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSG--FVTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGP  178 (286)
T ss_pred             EEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCc--cccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCC
Confidence            346899999999994332211 1111111110000  1223578999999999999999999999999987654322  1


Q ss_pred             C-cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHH
Q 026024          122 M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACE  197 (244)
Q Consensus       122 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~  197 (244)
                      + .+..+|+..++.                 ++.+.+...  .          .    ..+++||+|+|+|+++   +++
T Consensus       179 g~~~~~~~l~~~~~-----------------~~~~~l~~~--~----------~----~~~~~Hiaf~v~d~~~v~~~~~  225 (286)
T TIGR03213       179 GVTVRPYFLHCNER-----------------HHSLAFAAG--P----------S----EKRLNHLMLEVDTLDDVGLALD  225 (286)
T ss_pred             CCcceEEEEEECCC-----------------cceEEEecC--C----------C----CCceEEEEEEcCCHHHHHHHHH
Confidence            1 122445544221                 344554321  0          0    1267899999987666   899


Q ss_pred             HHHHCCCeEEecCC-CCC-cceEEEEECCCCCEEEEEe
Q 026024          198 RFERLGVEFAKKPD-GGK-LKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       198 rl~~~Gv~v~~~p~-~g~-~~~~~~~~DPdG~~IEi~e  233 (244)
                      +|+++|+ ....+. .+. ....+|++|||||+||+..
T Consensus       226 ~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       226 RVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             HHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            9999999 444442 222 2347889999999999976

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.71  E-value=1.2e-16  Score=121.99  Aligned_cols=123  Identities=26%  Similarity=0.419  Sum_probs=84.9

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      ++||.|.|+|++++.+||+++|||++......+ +..+..+++..+                   +..+++.........
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~   61 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-------------------NVQIELIEPLDDDSP   61 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-------------------CEEEEEEEECCCCCc
Confidence            579999999999999999999999998765432 223344555432                   467777654322111


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC-CCCcce-EEEEECCC--CCEEEEEe
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKG-VAFIKDPD--DYWIEIFD  233 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~-~g~~~~-~~~~~DPd--G~~IEi~e  233 (244)
                      .  ..+.  .....|..|++|.|+|+++++++++++|+++..++. ....+. ++|+.|||  ||+|||+|
T Consensus        62 ~--~~~~--~~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          62 I--AKFL--EKRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             H--HHHH--hcCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            0  0000  011247789999999999999999999999988775 333333 45555555  99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=4.9e-16  Score=125.83  Aligned_cols=119  Identities=17%  Similarity=0.276  Sum_probs=81.5

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|++|.|+|++++++||+++|||++......+.+.....|+....                 ....+.+...  ..
T Consensus         4 i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~l~~~--~~   64 (166)
T cd09014           4 VRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN-----------------KVHDVAYTRD--PA   64 (166)
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC-----------------CceeEEEecC--CC
Confidence            4679999999999999999999999999876643332222233443211                 1233443211  10


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCc-c-eEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-K-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~-~-~~~~~~DPdG~~IEi~e~  234 (244)
                                  ..+.+++||+|.|+|   +++++++|+++|+++...|..... . .++|++|||||+|||++.
T Consensus        65 ------------~~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          65 ------------GARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ------------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence                        011256899999985   558889999999998766543222 2 258899999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.71  E-value=5.2e-16  Score=116.86  Aligned_cols=110  Identities=24%  Similarity=0.369  Sum_probs=81.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|+.|.|+|++++++||+++|||++.....    .  ..++..+..                .+..+.+...  .. 
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~--~~~~~~~~~----------------~~~~~~~~~~--~~-   55 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----G--SVYLRCSED----------------DHHSLVLTEG--DE-   55 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----C--eEEEecCCC----------------CcEEEEEEeC--CC-
Confidence            579999999999999999999999999887642    1  233332210                1344554321  10 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e~  234 (244)
                                    .+..|++|.|+   |+++++++++++|+++...+...+ .++.+|+.|||||.||++..
T Consensus        56 --------------~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          56 --------------PGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             --------------CCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence                          15679999997   689999999999999988774322 34578999999999999975

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=5.3e-16  Score=116.50  Aligned_cols=108  Identities=21%  Similarity=0.330  Sum_probs=77.3

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      +..|.|+|++++++||+++|||++...    .+ + ..++.....                .+..+.+......      
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~~----------------~~~~~~~~~~~~~------   54 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQN----------------MTVQVSLATEGGT------   54 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecCC----------------CCcEEEEecCCCC------
Confidence            456899999999999999999998643    11 2 223322110                0345555322110      


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                           +    ....|++|.|+|+++++++|+++|+++..++....++ +.+|+.|||||.|||+++
T Consensus        55 -----~----~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          55 -----A----TVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             -----C----CCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence                 0    1335999999999999999999999998877554444 578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=6.2e-16  Score=117.26  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=80.5

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      +.|+.|.|.|++++++||+++|||++..+   +++.+  .++..++                  ...+.+..........
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~------------------~~~~~l~~~~~~~~~~   57 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGG------------------RGMLLLFDPGATSTPG   57 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCC------------------CcEEEEEecCCccccc
Confidence            46899999999999999999999998864   12222  3343322                  2334443322111000


Q ss_pred             CCCCCCCCCCCCCcceEEEEEe--CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          168 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~V--dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ..  ..  .....+..|++|.|  +|++++++++.++|+++...+.....+..+|++|||||.|||+++
T Consensus        58 ~~--~~--~~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          58 GE--IP--PHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CC--CC--CCCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            00  00  00113678999999  489999999999999987766433344578999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7e-16  Score=118.32  Aligned_cols=118  Identities=19%  Similarity=0.289  Sum_probs=83.3

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhcc---CCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      +++|+.|.|+|++++.+||+++|   ||++.....  +..   .|....                  .+..+++......
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~~---~~~~~~------------------~~~~i~l~~~~~~   57 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DGR---SWRAGD------------------GGTYLVLQQADGE   57 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cCc---eEEecC------------------CceEEEEEecccC
Confidence            47899999999999999999999   999887642  111   111111                  1467777643322


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEec
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .. ..   ..   ....|..|++|.|+   |+++++++++++|+++...+..    ......+|++|||||+|||+.+
T Consensus        58 ~~-~~---~~---~~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          58 SA-GR---HD---RRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CC-cc---cc---cCCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            11 10   11   11237789999997   5899999999999999887753    2234578999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.70  E-value=6.3e-16  Score=118.90  Aligned_cols=111  Identities=16%  Similarity=0.220  Sum_probs=80.1

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ...+|.|+.|.|+|++++.+||+++|||++..+..  .    ..|+..+.                 .++.+.+...  .
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~-----------------~~~~i~l~~~--~   57 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA--K----ATYFRSDA-----------------RDHTLVYIEG--D   57 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC--C----eEEEEcCC-----------------ccEEEEEEeC--C
Confidence            34689999999999999999999999999875421  1    23444321                 1344555321  1


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEecC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                      .+..|++|+|+|   +++++++++++|+++...+..    ...+.++||+|||||.|||+.+.
T Consensus        58 ----------------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          58 ----------------PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ----------------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence                            034699999975   999999999999998765421    11234678999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.70  E-value=2.8e-16  Score=122.12  Aligned_cols=114  Identities=16%  Similarity=0.251  Sum_probs=79.9

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      |+||.|.|+|++++++||+++|||++.....  .    ..++..+                   +..+++.......   
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~~---   52 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE--K----TAYFTIG-------------------GTWLALNEEPDIP---   52 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC--c----cceEeeC-------------------ceEEEEEccCCCC---
Confidence            5899999999999999999999999865421  1    1223221                   3445553321110   


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEecCC
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                          ..   ....+.+||+|.|+  |+++++++|+++|+++..++.. ...++.+|++|||||.|||.+...
T Consensus        53 ----~~---~~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          53 ----RN---EIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             ----cC---CcCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCcH
Confidence                00   01136789999998  4999999999999998755432 223457899999999999998643

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=9.1e-16  Score=116.22  Aligned_cols=115  Identities=19%  Similarity=0.232  Sum_probs=78.0

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      ++.|.|+|++++++||+++|||++....    ..+  ..+..++.                 ...|.+.... ....+. 
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~~-----------------~~~l~l~~~~-~~~~~~-   58 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWY--VSLRSPDG-----------------GVELAFMLPG-HETVPA-   58 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcE--EEEecCCC-----------------ceEEEEccCC-CCCCcc-
Confidence            6789999999999999999999988652    122  22322110                 2345553221 111000 


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                        . .......+ .|++|.|+|+++++++++++|+++..++...+++ +.++++|||||.|||+|
T Consensus        59 --~-~~~~~~~~-~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          59 --A-QYQFQGQG-LILNFEVDDVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             --h-hcccCCce-EEEEEEECCHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence              0 00111123 4999999999999999999999988877654444 57899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.69  E-value=1.3e-15  Score=118.01  Aligned_cols=119  Identities=24%  Similarity=0.391  Sum_probs=83.3

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +|+|+.|.|+|++++++||+++|||++....+.  ..  ..++..+..                .+..+.+........ 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~~----------------~~~~l~l~~~~~~~~-   59 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GG--LVFLSRDPD----------------EHHQIALITGRPAAP-   59 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--Cc--EEEEEecCC----------------CceEEEEEecCCCCC-
Confidence            589999999999999999999999998765321  12  334433200                135666654322110 


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeCCHH---HHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~VdDvd---~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                               .....+++|++|.|+|++   +++++++++|+++...+..+. ++.+|++|||||.|||+....
T Consensus        60 ---------~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          60 ---------PPGPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGN-AWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             ---------CCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCCc-eeEEEEECCCCCEEEEEEcCC
Confidence                     011236789999998755   688999999999887654332 356899999999999998654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.69  E-value=1.2e-15  Score=120.80  Aligned_cols=112  Identities=18%  Similarity=0.334  Sum_probs=80.6

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++.....  +   ...|+..+..                 +..+.+...  .  
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~-----------------~~~~~l~~~--~--   56 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD-----------------HHSIAIARG--P--   56 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC-----------------cceEEEccC--C--
Confidence            479999999999999999999999999865421  1   1344543321                 344555311  0  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHH---HHHHHCCCeEEecCCC-CCc-ceEEEEECCCCCEEEEEecCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~---~rl~~~Gv~v~~~p~~-g~~-~~~~~~~DPdG~~IEi~e~~~  236 (244)
                               .    .++.|++|.|+|++++.   ++|+++|+++...+.. +.. ..++||+|||||.|||++...
T Consensus        57 ---------~----~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          57 ---------H----PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             ---------C----CceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence                     0    26689999999877764   8999999999876532 222 246789999999999998643

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.68  E-value=1.7e-15  Score=114.33  Aligned_cols=109  Identities=13%  Similarity=0.110  Sum_probs=76.4

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||++ |||++..+..  +    ..++..++.                 ...+.+.. .+.  
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~----~~~~~~~~~-----------------~~~~~~~~-~~~--   54 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D----ELYYRGYGT-----------------DPFVYVAR-KGE--   54 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C----eEEEecCCC-----------------ccEEEEcc-cCC--
Confidence            4799999999999999999999 9999876521  1    123322110                 12222211 110  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                   ..++.|++|.|+|.+++.+.+++.|+.+...+.....+..+||+|||||.|||+..
T Consensus        55 -------------~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          55 -------------KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             -------------cCcccEEEEEECCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence                         02567999999999999999999999887654312224578999999999999764

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=3.4e-15  Score=113.02  Aligned_cols=116  Identities=16%  Similarity=0.139  Sum_probs=81.1

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      +.|.|+|++++.+||+++||+++......+++.+....+..+                   +..+.+.... +.. . ..
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~-~~~-~-~~   62 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-------------------DSVLMLADEF-PEH-G-SP   62 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-------------------CEEEEEecCC-ccc-C-CC
Confidence            568999999999999999999998776533443333333322                   3355554321 110 0 00


Q ss_pred             CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                       ..    .+.+..|++|.|+|++++++++.+.|+++..++....++ +.++++|||||.|||.+
T Consensus        63 -~~----~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          63 -AS----WGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             -CC----CCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence             00    112456999999999999999999999998887543343 57899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=9.6e-16  Score=117.37  Aligned_cols=120  Identities=17%  Similarity=0.126  Sum_probs=78.1

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      +.++.|.|+|+++|++||++ |||++......++  ......+  +                  ...|.|........  
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~------------------~~~l~l~~~~~~~~--   55 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D------------------NIFVMLLTEDFFQT--   55 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C------------------ceEEEEEcHHHHhh--
Confidence            35799999999999999976 9999875432222  1111111  1                  34555543211000  


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                       +.........+.+..|++|.|+   |+++++++++++|+++..+|...+++..+||+|||||+|||+.
T Consensus        56 -~~~~~~~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          56 -FTPKPIADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             -ccCCCcccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence             0000000011224569999998   6889999999999999888866555556899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.67  E-value=1.1e-15  Score=116.80  Aligned_cols=109  Identities=20%  Similarity=0.274  Sum_probs=77.3

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +++|+.|.|+|++++.+||+++|||++....+  +.    .++..+                   +..+.+......   
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~----~~~~~~-------------------~~~~~l~~~~~~---   52 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--KG----AYLEAG-------------------DLWLCLSVDANV---   52 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--Cc----eEEecC-------------------CEEEEEecCCCC---
Confidence            47899999999999999999999999876532  21    222221                   223333221110   


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEe--CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~V--dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                            ..    ..+..|++|.+  +|+++++++++++|+++...+...  +..+||+|||||.|||+...
T Consensus        53 ------~~----~~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          53 ------GP----AKDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE--GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             ------CC----CCCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC--ccEEEEECCCCCEEEEEeCC
Confidence                  00    12567999999  589999999999999987655332  34689999999999999753

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.67  E-value=1.9e-15  Score=117.38  Aligned_cols=111  Identities=16%  Similarity=0.183  Sum_probs=75.1

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhcc---CCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ..+++||.|.|+|+++|++||+++|   |++......         +.. +                   ...+.|.. +
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~~~-g-------------------~~~l~l~~-~   54 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------YST-G-------------------ESEIYFKE-V   54 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------eeC-C-------------------CeeEEEec-C
Confidence            4579999999999999999999966   555432111         100 0                   12233321 1


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCC---cc-eEEEEECCCCCEEEEEec
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGK---LK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~---~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      ...       ...    ..|..|+||.|   +|+|+++++++++|+++..+|...+   .+ ..+||+|||||.|||...
T Consensus        55 ~~~-------~~~----~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         55 DEE-------IVR----TLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             Ccc-------ccC----CCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            110       000    12567999998   6899999999999999987664311   23 467899999999999876


Q ss_pred             CC
Q 026024          235 KT  236 (244)
Q Consensus       235 ~~  236 (244)
                      .+
T Consensus       124 ~~  125 (128)
T PRK06724        124 PN  125 (128)
T ss_pred             CC
Confidence            44

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.67  E-value=2.4e-15  Score=113.97  Aligned_cols=111  Identities=17%  Similarity=0.202  Sum_probs=78.2

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      -+|+|+.|.|+|++++++||+++|||++.....    .+  .++..++.                ..+.+.+..   .. 
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~----------------~~~~~~~~~---~~-   55 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS----------------EHHILRLRR---SD-   55 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC----------------ccEEEEecc---CC-
Confidence            368999999999999999999999999875421    22  23332110                022333311   10 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCC--CCC-cceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD--GGK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~--~g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                   ..++.|++|.|   +|+++++++++++|+++...+.  ..+ .+..+||+||+||.|||+...
T Consensus        56 -------------~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          56 -------------RNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             -------------CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence                         01457999999   4799999999999999887652  122 245789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.66  E-value=2.7e-15  Score=118.36  Aligned_cols=110  Identities=16%  Similarity=0.153  Sum_probs=77.8

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      .||.|.|+|++++++||+++|||++..+..   .  ...|+......               .++.+.+..    .    
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---~--~~~~l~~~~~~---------------~~h~~~~~~----~----   52 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---D--RIVFMRCHPNP---------------FHHTFAVGP----A----   52 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---C--EEEEEEcCCCC---------------Ccceeeecc----C----
Confidence            499999999999999999999999887642   1  24555432110               023333311    0    


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCC--cceEEEEECCCCCEEEEEecC
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~--~~~~~~~~DPdG~~IEi~e~~  235 (244)
                               ...+++||+|.|+|   +++++++|+++|+++...|....  ....+|++|||||.|||.-..
T Consensus        53 ---------~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          53 ---------SSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             ---------CCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence                     01378999999975   56779999999999887764322  224689999999999998753

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.66  E-value=2.9e-15  Score=113.93  Aligned_cols=112  Identities=24%  Similarity=0.277  Sum_probs=78.5

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++.....    .+  .++.....               ..++.+.+...  . 
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~---------------~~~~~~~~~~~--~-   57 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEE---------------FIHHSLVLTKA--P-   57 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCC---------------CceEEEEEeeC--C-
Confidence            3689999999999999999999999999876521    12  22321100               00234444211  0 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCC-CCCc-ceEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-GGKL-KGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~-~g~~-~~~~~~~DPdG~~IEi~e~  234 (244)
                                    ..+..|++|.|   +|+++++++++++|+++...|. ..+. +..+|+.|||||.|||+..
T Consensus        58 --------------~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          58 --------------VAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             --------------CCceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence                          02568999999   4899999999999999876532 2222 3578999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.66  E-value=1.6e-15  Score=113.73  Aligned_cols=107  Identities=21%  Similarity=0.309  Sum_probs=74.6

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      |+.|.|+|++++++||+++|||++..+.+  +    ..++..+                   ...+.+.... ...    
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~-------------------~~~l~~~~~~-~~~----   50 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA-------------------GLWICLMEED-SLQ----   50 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec-------------------CeEEEeccCC-CcC----
Confidence            89999999999999999999999876532  1    1122211                   2344442211 100    


Q ss_pred             CCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecC-CCCCcceEEEEECCCCCEEEEEe
Q 026024          170 KGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP-DGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p-~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                        .     ...+..|++|.|+  |+++++++++++|+++.... .....++.+|++|||||+|||+.
T Consensus        51 --~-----~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          51 --G-----PERTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             --C-----CCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence              0     1125679999994  79999999999999987543 22233467899999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.8e-15  Score=112.07  Aligned_cols=109  Identities=22%  Similarity=0.352  Sum_probs=76.6

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      +.|.|+|++++++||+++||+++....    ..+..  +...+                  +..+.+........     
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~--~~~~~------------------~~~~~l~~~~~~~~-----   52 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFAL--FVLGS------------------GVKLGLWSRHTVEP-----   52 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEE--EEeCC------------------CcEEEEeeccccCC-----
Confidence            679999999999999999999977542    12322  22111                  34556643221110     


Q ss_pred             CCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          171 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                       ...   ...+..|++|.|+|   +++++++++++|+++..++....++..++|+|||||.|||+
T Consensus        53 -~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          53 -ASD---ATGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVF  113 (114)
T ss_pred             -CCC---CCCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEee
Confidence             000   01255799999975   89999999999999998876655556789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.65  E-value=1.8e-15  Score=112.38  Aligned_cols=107  Identities=25%  Similarity=0.389  Sum_probs=72.3

Q ss_pred             EEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCC
Q 026024           93 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY  172 (244)
Q Consensus        93 L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~  172 (244)
                      |.|+|++++++||+++|||++....+    .+..+..+...                 ......+.......        
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~-----------------~~~~~~~~~~~~~~--------   51 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRF-----------------HDGVIEFLQFPDPP--------   51 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEE-----------------EEEEEEEEEEESSS--------
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccch-----------------hhhhHHHccCCccc--------
Confidence            68999999999999999999998432    12222221100                 01122333221111        


Q ss_pred             CCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          173 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       173 ~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                          ..+.+..|++|.|+|+++++++++++|+++..+|....++ ..++++|||||+|||+
T Consensus        52 ----~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   52 ----GPPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             ----SSSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             ----cCCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence                0123668999999999999999999999998877554444 6799999999999986

...

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.65  E-value=2.9e-15  Score=114.06  Aligned_cols=116  Identities=19%  Similarity=0.218  Sum_probs=73.9

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC-C
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-D  166 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~-~  166 (244)
                      |+||.|.|+|+++|++||++ |||++......  ..+  ..+..++                  +..+.|........ .
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~--~~~~~~~------------------~~~l~l~~~~~~~~~~   57 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPH--VEAVLPG------------------GVRLAWDTVESIRSFT   57 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCc--EEEEeCC------------------CEEEEEEcccceeeec
Confidence            57999999999999999975 99998644221  111  1121111                  22333321100000 0


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                      +.   ..   ....+..|++|.|+   |+++++++++++|+++..++...+++ +.++|+|||||+|||+
T Consensus        58 ~~---~~---~~~~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          58 PG---WT---PTGGHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CC---CC---CCCCCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            00   00   01124468889875   89999999999999988877655554 5789999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.64  E-value=5.8e-15  Score=111.21  Aligned_cols=106  Identities=19%  Similarity=0.315  Sum_probs=71.9

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +|+|+.|.|.|++++++||+ +|||++..+.   + .  ..+...+.                 .+..+.+...  ..  
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~--~~~~~~~~-----------------~~~~~~~~~~--~~--   53 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-G--LELRTAGN-----------------DHRWARLLEG--AR--   53 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-c--eEEEecCC-----------------CceEEEeecC--CC--
Confidence            68999999999999999997 6999987542   1 1  22222111                 0233334211  10  


Q ss_pred             CCCCCCCCCCCCCCcceE--EEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          167 PDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~h--i~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                   .+..|  +.+.++|+++++++++++|+++...+.... .+.+||+|||||.|||...
T Consensus        54 -------------~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~~~-~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          54 -------------KRLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPGAD-PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             -------------CceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCcCC-CCEEEEECCCCCEEEEecC
Confidence                         02234  455568999999999999999877652222 2358999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=5.1e-15  Score=112.70  Aligned_cols=116  Identities=22%  Similarity=0.341  Sum_probs=72.2

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      |++|.|+|++++++||+++|||++.....    .+  .++...                   +..+.+........... 
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~-   55 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF-------------------GHQLVAHLSPNFNADAS-   55 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc-------------------CcEEEEEeccCCCcccc-
Confidence            99999999999999999999999865421    12  112111                   22333321111100000 


Q ss_pred             CCCCCCCCCCCcceEEEE--EeCCHHHHHHHHHHCCCeEEecCCC---CC--cceEEEEECCCCCEEEEEe
Q 026024          170 KGYHNGNSEPRGFGHIGI--TVDDVYKACERFERLGVEFAKKPDG---GK--LKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f--~VdDvd~~~~rl~~~Gv~v~~~p~~---g~--~~~~~~~~DPdG~~IEi~e  233 (244)
                      .....+  ...+..|++|  .++|+++++++|+++|+++..+|..   +.  ..+.+|++|||||.|||..
T Consensus        56 ~~~~~~--~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          56 DNAVDG--HPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             cCCCCC--CccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            000001  1124457654  5689999999999999999876632   11  1357899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=9e-15  Score=111.11  Aligned_cols=109  Identities=26%  Similarity=0.410  Sum_probs=76.1

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      .|+.|.|+|++++.+||+++||++...+.+  +  + ..|...+.                  ...+.+...  ...   
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~~~~------------------~~~~~~~~~--~~~---   54 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D--Y-AKFLLEDP------------------RLNFVLNER--PGA---   54 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C--e-eEEEecCC------------------ceEEEEecC--CCC---
Confidence            499999999999999999999998765531  1  1 12221110                  233333221  100   


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCC---cceEEEEECCCCCEEEEEec
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~---~~~~~~~~DPdG~~IEi~e~  234 (244)
                          ..     .+..|++|.|+|   ++++++++.++|+++...+....   ..+.+|++|||||.|||++.
T Consensus        55 ----~~-----~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          55 ----PG-----GGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             ----CC-----CCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence                00     266899999987   88999999999999887664322   13468999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.64  E-value=1.1e-14  Score=108.67  Aligned_cols=108  Identities=24%  Similarity=0.331  Sum_probs=76.5

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCC
Q 026024           92 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  171 (244)
Q Consensus        92 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~  171 (244)
                      .|.|+|++++++||+++|||++.....  ...+  .++..+                   +..+.|.......  .    
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~-------------------~~~~~l~~~~~~~--~----   53 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG-------------------GAQLMLSEHDGDE--P----   53 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC-------------------CEEEEEeccCCCC--C----
Confidence            589999999999999999999877642  1222  333321                   4556664332111  0    


Q ss_pred             CCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCe-EEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          172 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       172 ~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~-v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                      .     ...+..|++|.|+|+++++++++++|++ +..++....++ +.+|++|||||.|||+|
T Consensus        54 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          54 V-----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             C-----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            0     1124569999999999999999999998 55555443333 57889999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.5e-15  Score=111.90  Aligned_cols=112  Identities=16%  Similarity=0.115  Sum_probs=76.8

Q ss_pred             EEEEEEEcCCHHHHHHHHHhc---cCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRV---LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ++|+.|.|+|++++++||+++   ||+++..+.   ...+ +.|...+                  ....+.+.......
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~~-~~~~~~~------------------~~~~~~l~~~~~~~   58 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPGA-VGYGKGG------------------GGPDFWVTKPFDGE   58 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCce-eEeccCC------------------CCceEEEeccccCC
Confidence            579999999999999999999   699887553   1122 2222211                  13556664322111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCC----CcceEEEEECCCCCEEEEE
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g----~~~~~~~~~DPdG~~IEi~  232 (244)
                      .      ..     ..+..||+|.|+|   +++++++++++|+++..++...    .....+||+|||||.|||+
T Consensus        59 ~------~~-----~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          59 P------AT-----AGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             C------CC-----CCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            0      00     1134699999986   8889999999999988776432    2223689999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.64  E-value=9.1e-15  Score=128.21  Aligned_cols=152  Identities=20%  Similarity=0.267  Sum_probs=95.2

Q ss_pred             ccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEE
Q 026024           46 TSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS  125 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~  125 (244)
                      .-+++||.++.++-...... ....  ..... .......++++|++|.|+|++++++||+++|||++..+...+.+.+.
T Consensus        99 ~~~~~DPdG~~iEl~~~~~~-~~~~--~~~~~-~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~  174 (294)
T TIGR02295        99 ALRVEDPFGYPIEFYFEMEK-VERL--LRRYH-RHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLA  174 (294)
T ss_pred             EEEEECCCCCEEEEEEchhh-cccc--ccccc-ccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEE
Confidence            34679999998883321110 0000  00000 01113568999999999999999999999999998766433333333


Q ss_pred             EEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHC
Q 026024          126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERL  202 (244)
Q Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~  202 (244)
                      ..|+..+.                 .++.+.+...             .+    .+++|+||.|+|   +++++++|+++
T Consensus       175 ~~~~~~~~-----------------~~~~~~~~~~-------------~~----~~~~Hiaf~v~d~~~v~~~~~~l~~~  220 (294)
T TIGR02295       175 AAWLHRKG-----------------GVHDIALTNG-------------NG----PRLHHIAYWVHDPLNIIKACDILASA  220 (294)
T ss_pred             EEEEecCC-----------------CcCceEeecC-------------CC----CceeeEEEEcCCHHHHHHHHHHHHhC
Confidence            34443211                 1233444210             01    277899999998   55678999999


Q ss_pred             CCe--EEecCCC-CCc-ceEEEEECCCCCEEEEEecC
Q 026024          203 GVE--FAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       203 Gv~--v~~~p~~-g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                      |++  +...|.. +.. ..++|++|||||.|||+...
T Consensus       221 G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       221 GLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             CCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            997  5444422 211 23689999999999998743

The enzyme from Bacillus brevis contains manganese.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.63  E-value=1e-14  Score=111.10  Aligned_cols=107  Identities=17%  Similarity=0.160  Sum_probs=74.1

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      ...|.|+|++++++||++ |||++..+..  . .+  .++..+                   +..++|.......  +  
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~--~-~~--~~~~~~-------------------~~~l~l~~~~~~~--~--   55 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQA--A-GY--MILRRG-------------------DLELHFFAHPDLD--P--   55 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCC--C-CE--EEEEcC-------------------CEEEEEEecCcCC--C--
Confidence            467999999999999999 9999876532  1 23  223321                   3466665421110  0  


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEE-------ecCCCC-CcceEEEEECCCCCEEEEEec
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-------KKPDGG-KLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~-------~~p~~g-~~~~~~~~~DPdG~~IEi~e~  234 (244)
                        .       ....|++|.|+|+++++++|+++|+++.       .++... ...+.+||+|||||.|||.|.
T Consensus        56 --~-------~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          56 --A-------TSPFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             --C-------CCcceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence              0       1224899999999999999999999853       233322 233578999999999999984

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.62  E-value=1.2e-14  Score=106.58  Aligned_cols=111  Identities=29%  Similarity=0.377  Sum_probs=81.7

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      |+.|.|+|++++.+||+++||+++........  ....++..+                   +..+++........    
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~-------------------~~~i~l~~~~~~~~----   55 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG-------------------GTRLELFEGDEPAP----   55 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC-------------------CceEEEecCCCCCC----
Confidence            88999999999999999999999887754211  233444432                   46777765432211    


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC-CCCcceEEEEECCCCCEEEE
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEI  231 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~-~g~~~~~~~~~DPdG~~IEi  231 (244)
                        .    ....+..|++|.|+|+++++++++++|+.+...+. .......+|+.||+||.|||
T Consensus        56 --~----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          56 --A----PSGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             --c----ccCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence              0    01236689999999999999999999999888764 33334678999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.60  E-value=2.9e-14  Score=125.72  Aligned_cols=113  Identities=21%  Similarity=0.281  Sum_probs=81.7

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeec-CCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      .++++|+.|.|+|++++++||+++|||++..+..  .    ..++.. ++.                .+..+.+...  .
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~----------------~~~~~~l~~~--~   57 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG--Q----RVYLKAWDEW----------------DHYSVILTEA--D   57 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC--c----eEEEEecccc----------------ccceEeeccC--C
Confidence            4789999999999999999999999999876532  1    122321 110                1334444211  0


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCC--CCCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~--~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                     ..|+.|++|.|+   |+++++++|+++|+++...+.  ....+..+||+|||||.|||++...
T Consensus        58 ---------------~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        58 ---------------TAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             ---------------CCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence                           026789999998   799999999999999877653  2223456899999999999998543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=2.4e-14  Score=108.39  Aligned_cols=103  Identities=19%  Similarity=0.196  Sum_probs=70.4

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      ..|.|+|++++++||++ |||++..+.    ..+  .++..+                   +..+.|... ....     
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~--~~l~~~-------------------~~~l~l~~~-~~~~-----   52 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN----DNL--AYFRLG-------------------NCAFYLQDY-YVKD-----   52 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC----CCE--EEEEcC-------------------CEEEEeecC-CCcc-----
Confidence            46899999999999987 999998763    122  334332                   344444221 1110     


Q ss_pred             CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEe-----cCCC-CCcceEEEEECCCCCEEEEEe
Q 026024          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-----KPDG-GKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~-----~p~~-g~~~~~~~~~DPdG~~IEi~e  233 (244)
                       .       .+..+++|.|+|+++++++|+++|+++..     ++.. ..+.+.++|+|||||+|+|.+
T Consensus        53 -~-------~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          53 -W-------AENSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             -c-------ccCCEEEEEECCHHHHHHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence             0       02248999999999999999999987532     2222 233468999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=6.1e-14  Score=105.96  Aligned_cols=115  Identities=17%  Similarity=0.117  Sum_probs=74.8

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      |.|.|+|++++.+||+++|||++..+.   +..+  .++..+                   +..+++...........  
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~--   55 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG-------------------GLVLALFPREELAKDAG--   55 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC-------------------CeEEEEecchhhhhhcC--
Confidence            689999999999999999999987651   1222  233321                   34566543211100000  


Q ss_pred             CCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEe
Q 026024          171 GYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e  233 (244)
                       ..... ...+..|++|.+   +|+++++++++++|+++..++...++ +..+|++|||||+|||..
T Consensus        56 -~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          56 -VPVPP-PGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             -CCCCC-CCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence             00000 111334676665   58999999999999999877754443 457899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.57  E-value=8.1e-14  Score=122.19  Aligned_cols=112  Identities=24%  Similarity=0.325  Sum_probs=80.3

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++++||+++|||++..+..    .  ..++......               ....+.+...  . 
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~--~~~~~~~~~~---------------~~~~l~l~~~--~-   57 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E--YIYLRGIEEF---------------QHHSLVLTKA--P-   57 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C--eEEEeccCcC---------------CceEEEeeeC--C-
Confidence            3679999999999999999999999999876532    1  1223211100               0233444321  0 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                    ..+..|++|.|+   |+++++++|+++|+++...+..+. ...+||+|||||.|||+...
T Consensus        58 --------------~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~-~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        58 --------------SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQ-PEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             --------------CcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCCC-ceEEEEECCCCCEEEEEEch
Confidence                          015679999997   799999999999999887653322 36789999999999999843

The enzyme from Bacillus brevis contains manganese.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.54  E-value=4.3e-14  Score=117.43  Aligned_cols=120  Identities=37%  Similarity=0.619  Sum_probs=99.5

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----------CcEEEEEeecCCCCCCCCCCccceeeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKP  152 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  152 (244)
                      ..-++-|+.+.|.|.++++.||+++|||++.+..++++           ++|.-.|+|++.+.               .|
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEd---------------sh   78 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPED---------------SH   78 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCc---------------cc
Confidence            34577899999999999999999999999998887776           78888899986432               28


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       153 ~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                      ..+||+.+.+...      |..|+    +|.||.+.++|+-...+.++..|.+       +....+++++||||+.++|+
T Consensus        79 FViELTYNYgV~~------YelGn----dfg~i~I~s~dv~~~ve~v~~p~~~-------~~g~~~~~v~dPdGykF~l~  141 (299)
T KOG2943|consen   79 FVIELTYNYGVSK------YELGN----DFGGITIASDDVFSKVEKVNAPGGK-------GSGCGIAFVKDPDGYKFYLI  141 (299)
T ss_pred             EEEEEEeccCccc------eeccC----CcccEEEeHHHHHHHHHHhcCcCCc-------ccceEEEEEECCCCcEEEEe
Confidence            9999999988765      88888    9999999999998888887776642       22234689999999999999


Q ss_pred             ecC
Q 026024          233 DLK  235 (244)
Q Consensus       233 e~~  235 (244)
                      ++.
T Consensus       142 ~~~  144 (299)
T KOG2943|consen  142 DRG  144 (299)
T ss_pred             ccC
Confidence            853

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.53  E-value=1.7e-13  Score=119.92  Aligned_cols=110  Identities=18%  Similarity=0.239  Sum_probs=79.1

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++..+..  .+   ..|+..+.                 .+..+.+...  .. 
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~-----------------~~~~~~l~~~--~~-   56 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDS-----------------RAHRIAVHPG--ES-   56 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCC-----------------CceEEEEEEC--Cc-
Confidence            478999999999999999999999999765421  11   12333221                 1344544321  10 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCC----CCCcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~----~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                    .++.|++|.|+|   ++++.++|+++|+++...+.    ....+..+||+|||||.|||+..
T Consensus        57 --------------~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        57 --------------DDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             --------------CCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence                          155799999998   89999999999999887552    11223578999999999999974

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.49  E-value=1.3e-12  Score=100.47  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=85.1

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .-.+.|..|.|.|++++++||++|||+++....+..+..+  +.+..++..               -+..  |.....  
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~~---------------~gG~--l~~~~~--   65 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGAG---------------AGGG--LMARPG--   65 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCcc---------------ccce--eccCCc--
Confidence            3457899999999999999999999999988765433333  333222110               0111  111100  


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                             ...+    .+..++.|.|+|+++..+|++++|.+++.++..-+ .++++.+.||+||+|-|.+..
T Consensus        66 -------~~p~----~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          66 -------SPPG----GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             -------CCCC----CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence                   1111    13458999999999999999999999999987755 677889999999999999864

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.49  E-value=1.9e-13  Score=102.80  Aligned_cols=97  Identities=26%  Similarity=0.348  Sum_probs=72.6

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      +||+|.|+|++++++||+++||++.......+.......++..++.                 ...|||+++.....  .
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~-----------------~~~iELi~p~~~~~--~   61 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG-----------------PVQIELIQPLDGDS--P   61 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE-----------------TEEEEEEEESSTTC--H
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC-----------------cEEEEEEEeCCCCc--c
Confidence            6999999999999999999999998776655555555555554321                 26899988654331  0


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      .  ...    ..|++||||.|+|++++.++|+++|+++...+
T Consensus        62 ~--~~~----~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   62 L--DRG----GGGIHHIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             H--HHT----SSEEEEEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             c--ccC----CCCEEEEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence            0  012    24999999999999999999999999988754

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.44  E-value=2.2e-12  Score=109.62  Aligned_cols=121  Identities=18%  Similarity=0.334  Sum_probs=88.5

Q ss_pred             CCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        82 ~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      .+..+.++.+.|.|+|++.+..||+++||+++..+.+.      ...++.++                  ...|.|.+..
T Consensus         5 ~~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg------------------~~LL~L~q~~   60 (265)
T COG2514           5 LTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG------------------TPLLTLEQFP   60 (265)
T ss_pred             cCCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC------------------EEEEEEEeCC
Confidence            35678999999999999999999999999999987531      23344332                  3466665533


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .....+         +...|+.|++|.++   |+..+..++.+.|+.+.. ..+......+|+.||+||.|||+..+.
T Consensus        61 ~a~~~~---------~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~G-a~DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          61 DARRPP---------PRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVG-ASDHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             CCCCCC---------ccccceeeeeeecCCHHHHHHHHHHHHhcCCcccc-cCcchhheeeeecCCCCCeEEEEecCC
Confidence            322111         11138899999998   688889999999998763 333444557999999999999998643

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.39  E-value=5.2e-12  Score=104.60  Aligned_cols=104  Identities=23%  Similarity=0.395  Sum_probs=71.8

Q ss_pred             eEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCC--CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           86 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        86 ~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      .+++|+++.|+  |++++++||+++|||+.......++  ......++....                 +...|+|.+..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~-----------------g~i~l~L~~~~   64 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD-----------------GKIRIPLNEPA   64 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC-----------------CcEEEEEecCC
Confidence            36899999999  9999999999999999887765332  223333443321                 14667776533


Q ss_pred             CCCCCCC---CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          162 GTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       162 ~~~~~~~---~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      .......   +.....|    .|++||||.|+|+++++++|+++|+++...|
T Consensus        65 ~~~~~s~~~~fl~~~~G----~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          65 SGKRKSQIQEFLEYYGG----AGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCCCccHHHHHHHHhCC----CceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            2101000   0001122    3889999999999999999999999998776

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.29  E-value=5e-11  Score=88.63  Aligned_cols=129  Identities=20%  Similarity=0.283  Sum_probs=79.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +.+-|++|.|.|++++++||.++||++.-...+    .| +.|--++.                  +..+.+........
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd----~w-vdfDfyGH------------------Q~v~Hl~~q~~~~~   59 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD----TW-VDFDFYGH------------------QVVAHLTPQPDSQG   59 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc----eE-EEeeeccc------------------EEEEEecCCccccc
Confidence            456799999999999999999999998765532    12 22211211                  23333322211111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC---CCCcc--eEEEEECCCCCEEEEEecCCCCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD---GGKLK--GVAFIKDPDDYWIEIFDLKTIGKI  240 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~---~g~~~--~~~~~~DPdG~~IEi~e~~~~~~~  240 (244)
                      +..   . .+...+....-+.|.++|--++.+||+++|+.+..+|.   .|..+  +.+|+.||.||.+|+-.-....++
T Consensus        60 ~g~---V-~~~~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~e~v  135 (138)
T COG3565          60 SGK---V-DGHGVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQEQV  135 (138)
T ss_pred             Ccc---c-CCCCCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccchhhh
Confidence            111   1 11111111123456667999999999999999887773   12222  357889999999999876666554


Q ss_pred             C
Q 026024          241 G  241 (244)
Q Consensus       241 ~  241 (244)
                      .
T Consensus       136 F  136 (138)
T COG3565         136 F  136 (138)
T ss_pred             h
Confidence            3

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.28  E-value=2.4e-11  Score=91.40  Aligned_cols=131  Identities=24%  Similarity=0.326  Sum_probs=75.6

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCc---EEEEEeecCCCCCCCCCCccceeeecCCC-cEEEEeecC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK---FSLYFLGYEDTASAPADPVDRTVWTFGKP-ATIELTHNW  161 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~leL~~~~  161 (244)
                      ++++|++|.|+|++++++||+++|||++..........   ....+.......  . .     .+..... ...+.....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-----~~~~~~~~~~~~~~~~~   72 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGP--G-E-----LLAFFGFEGRAGTGFVG   72 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCc--c-c-----ceeeccccccccccccc
Confidence            47899999999999999999999999999875432221   112222211000  0 0     0000000 000000000


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                       ..    ......+.   .+..|+++.++|   ...........|..+..... ...+..+|++||||+.|||++
T Consensus        73 -~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          73 -DV----ALGVPGGD---LGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             -ce----EEeecCch---hccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcceEEEEECCCCcEEEeeC
Confidence             00    00000000   145799999998   67777777788888766543 333347999999999999974

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.13  E-value=8.7e-10  Score=99.59  Aligned_cols=105  Identities=18%  Similarity=0.359  Sum_probs=70.7

Q ss_pred             ceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCC--CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           85 GYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        85 ~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ..+++|++|.|.  |+++++.||+++|||++..+.+...  .......+...                 .+...|+|.++
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~-----------------~g~~~i~L~ep  218 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP-----------------DGKVKIPLNEP  218 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC-----------------CCcEEEEEecc
Confidence            457999999999  9999999999999999887654321  11111112111                 12466777653


Q ss_pred             CCCCCCCC---CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          161 WGTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       161 ~~~~~~~~---~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      ........   +.....|    .|++||||.|+|+++++++|+++|+++...|
T Consensus       219 ~~~~~~s~i~~fl~~~~g----~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       219 ASGKDKSQIEEFLEFYNG----AGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             CCCCCCCHHHHHHHHcCC----CCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            21111110   1012223    3889999999999999999999999998776

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.12  E-value=6.9e-10  Score=83.83  Aligned_cols=122  Identities=17%  Similarity=0.204  Sum_probs=74.3

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      ++.-|.|+|+|++++.+||+. |||+......... .  ..++-.                   ....+.|+....=.. 
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~-a--~~mi~~-------------------~ni~vMLL~~~~fq~-   58 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED-A--ACMIIS-------------------DNIFVMLLEEARFQT-   58 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc-c--eeEEEe-------------------ccEEEEEeccHHhhh-
Confidence            456789999999999999965 9999876654221 1  111111                   133444433211000 


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEecC
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                        +.....+......-.-++|.++   ++|++.++..+.|.+...++.+ +.+.+ .-|+|||||.||++-.+
T Consensus        59 --F~~~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg-~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          59 --FTKRQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYG-RSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             --hcccccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccc-eeeeCCCCCeEEEEEeC
Confidence              0000011111112347888886   6999999999999999877754 33322 34699999999998654

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.12  E-value=4e-09  Score=81.42  Aligned_cols=110  Identities=13%  Similarity=0.089  Sum_probs=69.9

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCEEEEeeeCCCC----------cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           91 TMFRI-KDPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        91 v~L~V-~Dle~a~~FY~~vLG~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      ..|.+ .|.++|++||+++||+++......++.          ......+..                   .+..|.+..
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i-------------------~g~~l~~~d   63 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTI-------------------GGQRLMASD   63 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEE-------------------CCEEEEEEc
Confidence            45777 999999999999999999877542211          111111111                   133444432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEE
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEI  231 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi  231 (244)
                      .. ... .    ..     +.+..++++.|+|   +++++++|++.| ++..++...+++ +.++++||+|+.|+|
T Consensus        64 ~~-~~~-~----~~-----~~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          64 GG-PGF-P----FT-----FGNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQI  127 (128)
T ss_pred             CC-CCC-C----CC-----CCCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEe
Confidence            21 110 0    00     1123589999986   778889987766 777777554444 468899999999997

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.10  E-value=2.9e-09  Score=96.18  Aligned_cols=126  Identities=20%  Similarity=0.171  Sum_probs=80.1

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +.++|+.|.|+|++++++||++.|||++.......... ....+..                   +...|+|........
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~-------------------G~~~l~L~~~~~~~s   60 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ-------------------GQINFVLTAPYSSDS   60 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe-------------------CCEEEEEecCCCCCc
Confidence            46899999999999999999999999988762211221 1122221                   146777764322210


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC--CcceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g--~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                       + ...+..  ..+.|..|++|.|+|+++++++++++|+++..+|...  ....+.-++-++|..+-|+++.
T Consensus        61 -~-~~~~~~--~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~  128 (353)
T TIGR01263        61 -P-AADFAA--KHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRG  128 (353)
T ss_pred             -h-HHHHHH--hCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCC
Confidence             0 000100  0123789999999999999999999999998877432  1112233455666666666643

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.07  E-value=4.9e-10  Score=93.48  Aligned_cols=120  Identities=28%  Similarity=0.463  Sum_probs=88.2

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      +.+|.|.|.|+++|++||.+.|||++...    +..++...++|++.                 ...|||..+.+...  
T Consensus       150 v~~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~-----------------q~~LElt~~~~~id--  206 (299)
T KOG2943|consen  150 VLQVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE-----------------QCVLELTYNYDVID--  206 (299)
T ss_pred             eEEEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc-----------------ceEEEEEeccCccc--
Confidence            56899999999999999999999999875    22345678888764                 58899987755432  


Q ss_pred             CCCCCCCCCCCCCcceEEEEEe--CCHHHHHHHHHHCCCeEEecC----CCCCcc-eEEEEECCCCCEEEEEecCCCCCC
Q 026024          168 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKP----DGGKLK-GVAFIKDPDDYWIEIFDLKTIGKI  240 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~V--dDvd~~~~rl~~~Gv~v~~~p----~~g~~~-~~~~~~DPdG~~IEi~e~~~~~~~  240 (244)
                          +..      |+..++|.+  +|+..+.+.++..+.++..+.    ..+... .++-+.||||+.|.|+....+.++
T Consensus       207 ----~~k------g~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~l  276 (299)
T KOG2943|consen  207 ----RAK------GFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKL  276 (299)
T ss_pred             ----ccc------cceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHH
Confidence                222      556677766  588888888888866655443    223222 366789999999999998776554

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.05  E-value=1.5e-08  Score=79.17  Aligned_cols=118  Identities=19%  Similarity=0.206  Sum_probs=80.2

Q ss_pred             EEEEcC-CHHHHHHHHHhccCCEEEEeeeCCCC----------cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           91 TMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEM----------KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        91 v~L~V~-Dle~a~~FY~~vLG~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      .-|.++ |-++|++||+++||.+++.+...++.          .....-+..+                   +..|.+..
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~-------------------g~~im~sd   64 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG-------------------GSTIMLSD   64 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC-------------------CEEEEEec
Confidence            457788 99999999999999999988776552          2222222221                   23333322


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecCC
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ......      ...++   ..-.-|.+.++|++++++++.+.|+++..++.+..++ +...++||.|+.|-|.....
T Consensus        65 ~~~~~~------~~~~~---~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          65 AFPDMG------ATEGG---GTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             CCCccC------cccCC---CeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCcc
Confidence            211110      11121   1224678888899999999999999999998776655 46679999999999987654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.03  E-value=1.2e-09  Score=93.17  Aligned_cols=138  Identities=16%  Similarity=0.266  Sum_probs=89.0

Q ss_pred             cccccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC
Q 026024           43 KTTTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM  122 (244)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  122 (244)
                      +-..+|.++.+++.|.+...+.+.......   .......+.+..|+||.|.|.|++++.+||+++|||++..+.  +. 
T Consensus       127 rp~~~W~~~~~~v~m~t~~ld~~~ll~~~~---~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~--~~-  200 (265)
T COG2514         127 RPRSTWDWQNDQVKMDTEPLDVEALLEEAT---KEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARG--PS-  200 (265)
T ss_pred             CChHHhcccCCeeeecccccCHHHHhhhcc---ccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecC--Cc-
Confidence            556678787777777766655544333221   222244567899999999999999999999999999999872  22 


Q ss_pred             cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHC
Q 026024          123 KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL  202 (244)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~  202 (244)
                         ..|+..++.                 ++.|.+ ..|......      .++....|+..+.+.+++-........  
T Consensus       201 ---A~F~a~G~Y-----------------HHHia~-N~W~s~~~~------~~~~~~~GLa~~~i~~~~~~~l~~~~~--  251 (265)
T COG2514         201 ---ALFLASGDY-----------------HHHLAA-NTWNSRGAR------PRNANASGLAWLEIHTPDPEKLDATGT--  251 (265)
T ss_pred             ---ceEEecCCc-----------------ceeEEE-eccccCCCC------CCCCCCCCcceEEEEcCCccccccccc--
Confidence               356666554                 566666 445544321      111222477888888877332211110  


Q ss_pred             CCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          203 GVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       203 Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                                       ..+||+|+.|.++
T Consensus       252 -----------------~~~Dp~G~~i~~~  264 (265)
T COG2514         252 -----------------RLTDPWGIVIRVV  264 (265)
T ss_pred             -----------------ceecCCCceEEEe
Confidence                             0189999999875

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.89  E-value=4.5e-09  Score=95.69  Aligned_cols=105  Identities=11%  Similarity=0.242  Sum_probs=72.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC-----cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      -.+|+|+++.|.|+++++.||+++|||+.....+.++.     .....++..++                 +...|+|.+
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~-----------------g~v~ipLnE  240 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN-----------------EMVLLPLNE  240 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC-----------------CcEEEEecc
Confidence            34799999999999999999999999998865543221     12333343221                 246778866


Q ss_pred             cCCC--CCC--CCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHC----CCeEEecC
Q 026024          160 NWGT--ESD--PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAKKP  210 (244)
Q Consensus       160 ~~~~--~~~--~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~----Gv~v~~~p  210 (244)
                      +...  ...  ..+-....|    .|++||+|.|+|+.++.++|+++    |++++..|
T Consensus       241 P~~~~~~~SqI~eFL~~~~G----~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        241 PTFGTKRKSQIQTYLEHNEG----PGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             CCCCCCCcChHHHHHHhcCC----CCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            4321  111  111112222    39999999999999999999999    99999854

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.72  E-value=7.2e-08  Score=85.51  Aligned_cols=106  Identities=19%  Similarity=0.268  Sum_probs=69.2

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      -++.||+|.|+|+++|++||+++||+.. ..    ++. .. .++  +                  ...+.+.....+. 
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~-a~-cm~--d------------------tI~vMllt~~D~~-  297 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDK-LF-LLG--K------------------TSLYLQQTKAEKK-  297 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCc-cc-ccc--C------------------cEEEEEecCCCCC-
Confidence            4566999999999999999999988874 22    111 11 111  1                  1222222111110 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                             .      ..-.-+|+.++   ++|++.+++.++|.....++.+...+  --|.|||||.||++-.
T Consensus       298 -------~------~~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~--rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        298 -------N------RGTTTLSLELECEHDFVRFLRRWEMLGGELGEQADGHFPL--RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             -------C------cceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcccccCc--ceeECCCCCEEEEEEE
Confidence                   0      12247899997   69999999999999776666543332  3468999999999853

>PRK10148 hypothetical protein; Provisional

Probab=98.32  E-value=5.9e-05  Score=59.87  Aligned_cols=51  Identities=10%  Similarity=-0.083  Sum_probs=40.4

Q ss_pred             eEEEEEeCCHHH---HHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          183 GHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       183 ~hi~f~VdDvd~---~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      .+|++.++|.++   ++++| +.|.++..++.+..++ ++..++||.|+.|.|...
T Consensus        87 ~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         87 FTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             EEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            488888888876   55655 6889999888766665 467899999999999775

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.27  E-value=3.8e-06  Score=68.35  Aligned_cols=125  Identities=17%  Similarity=0.243  Sum_probs=62.1

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcE--EEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF--SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+|+.+.|+|++++.++|++.|||.+......+..+.  .+++++                     ...|||+.......
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~---------------------~~YlEli~i~~~~~   59 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG---------------------DGYLELIAIDPEAP   59 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S---------------------SSEEEEEEES-HHH
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC---------------------CceEEEEEeCCccc
Confidence            6899999999999999999999999997766554222  233332                     34999987422211


Q ss_pred             CCCCCCCCCCC---CCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC-CCC-Cc-ceEEEEECC----CCCEEEEEec
Q 026024          166 DPDFKGYHNGN---SEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGG-KL-KGVAFIKDP----DDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~---~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p-~~g-~~-~~~~~~~DP----dG~~IEi~e~  234 (244)
                      .+... ...+.   ....|+.++||.++|+++..+++++.|+...... .+| .. ...+++.|.    .+..-++++.
T Consensus        60 ~~~~~-~~~~~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~  137 (175)
T PF13468_consen   60 APDRG-RWFGLDRLAGGEGLYGWALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQW  137 (175)
T ss_dssp             STGGG-T-TTTHHHHT--EEEEEEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEE
T ss_pred             ccccc-cceechhhcCCCCeEEEEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEe
Confidence            11000 11000   0234889999999999999999999998622111 011 11 135666664    2455566653

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.24  E-value=3.7e-05  Score=58.07  Aligned_cols=119  Identities=19%  Similarity=0.295  Sum_probs=63.6

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      .+-.|+|+|=+..++||+++|||++..+..      .++.+|...                 +...+.|-+.+....   
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~-----------------~~erlvlEESP~~rt---   55 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQ-----------------KEERLVLEESPSMRT---   55 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT-------------------EEEEEEE--TTT----
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCC-----------------CceEEEEecCCcccc---
Confidence            467899999999999999999999998742      245566421                 134555544322210   


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCCCC
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI  240 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~~~  240 (244)
                         ....  .+--++++-+.|++.+++ +.|.++|.++...- .|..+..+-+.+|.|+.|.|....++..+
T Consensus        56 ---r~V~--G~KKl~~ivIkv~~~~EI-e~LLar~~~~~~l~-kg~~gyAfe~vSPEgd~~llhaEdd~~~L  120 (125)
T PF14506_consen   56 ---RAVE--GPKKLNRIVIKVPNPKEI-EALLARGAQYDRLY-KGKNGYAFEAVSPEGDRFLLHAEDDISDL  120 (125)
T ss_dssp             ---B--S--SS-SEEEEEEEESSHHHH-HHHHHC-S--SEEE-E-SSSEEEEEE-TT--EEEEE--S-GGG-
T ss_pred             ---cccc--CcceeeEEEEEcCCHHHH-HHHHhcccccceeE-EcCCceEEEEECCCCCEEEEEEcCCHhHc
Confidence               1111  112567999999986664 44556665533222 23333345578999999999987766544

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.21  E-value=4.1e-06  Score=74.07  Aligned_cols=106  Identities=20%  Similarity=0.303  Sum_probs=69.1

Q ss_pred             CceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCCCcE---EEEEeecCCCCCCCCCCccceeeecCCCcEEEEe
Q 026024           84 NGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKF---SLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (244)
Q Consensus        84 ~~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~  158 (244)
                      +.+.|+|+...|+  .++....||+++|||+.....+.++...   .-++...+                  +...|-|-
T Consensus       164 g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~------------------G~vrlplN  225 (363)
T COG3185         164 GLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPC------------------GKVRLPLN  225 (363)
T ss_pred             CceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCC------------------CcEEeecc
Confidence            3468999987766  9999999999999999998877653221   11111111                  13344442


Q ss_pred             ecCCCCC-CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC
Q 026024          159 HNWGTES-DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD  211 (244)
Q Consensus       159 ~~~~~~~-~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~  211 (244)
                      ....... ...+-....|    .|++||+|.++|+.++.++++++|+++...|.
T Consensus       226 ~s~~~~sqi~efl~~y~G----~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         226 ESADDKSQIGEFLREYRG----EGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             cCCCchhHHHHHHHHhCC----CcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            2111110 0111111122    48999999999999999999999999998773

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.00  E-value=0.00014  Score=66.52  Aligned_cols=133  Identities=16%  Similarity=0.179  Sum_probs=82.0

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC--cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC-
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-  164 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~-  164 (244)
                      ++||.+.|.|.+++..||+..|||+.+.......+  ......+..                   +...+.+.....+. 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~-------------------g~i~fv~~~~~~~~~   61 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRS-------------------GDLVFLFTAPYSPKI   61 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEe-------------------CCEEEEEeCCCCCcc
Confidence            58999999999999999999999998876542111  122222321                   13344443321110 


Q ss_pred             -C--CCCCCC-----CCCC------CCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-C---c--ceEEEEECC
Q 026024          165 -S--DPDFKG-----YHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-K---L--KGVAFIKDP  224 (244)
Q Consensus       165 -~--~~~~~~-----~~~g------~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~---~--~~~~~~~DP  224 (244)
                       .  +....+     +...      ...+.|..-++|+|+|++++++++.++|.+...++... .   .  ..+.-++-+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~  141 (398)
T PLN02875         62 GAGDDDPASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELY  141 (398)
T ss_pred             ccccccccccccccccCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEcc
Confidence             0  000000     0000      00123777899999999999999999999998876431 1   1  134557888


Q ss_pred             CCCEEEEEecCCCCC
Q 026024          225 DDYWIEIFDLKTIGK  239 (244)
Q Consensus       225 dG~~IEi~e~~~~~~  239 (244)
                      +|..+-|+++.....
T Consensus       142 G~~~h~lVdr~~~~~  156 (398)
T PLN02875        142 GDVVLRYVSYKGFDG  156 (398)
T ss_pred             CCcEEEEEccCCCCC
Confidence            889999998765443

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.87  E-value=4.4e-05  Score=66.65  Aligned_cols=130  Identities=12%  Similarity=0.174  Sum_probs=76.7

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC--CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ...+++||.+.|.|...+..||+..|||+.........  ..+.-..+..                   +....-+....
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~-------------------g~~vFv~~s~~   74 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ-------------------GKIVFVFNSAY   74 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc-------------------CCEEEEEecCC
Confidence            35789999999999999999999999999876442221  1111111110                   11222222221


Q ss_pred             CCCCCCCCC--CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC---CC-cceEEEEECCCCCEEEEEecC
Q 026024          162 GTESDPDFK--GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       162 ~~~~~~~~~--~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~---g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++.. +.+.  -...|.    |..-+||+|+|++++...+.++|+.+..+|..   .. .-+++.++.+.-....++|++
T Consensus        75 ~p~~-~~~G~~l~~Hgd----gvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~  149 (381)
T KOG0638|consen   75 NPDN-SEYGDHLVKHGD----GVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERK  149 (381)
T ss_pred             CCCc-hhhhhhhhhccc----chhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhc
Confidence            1111 0000  011222    56689999999999999999999999888732   11 113455666654455555554


Q ss_pred             CC
Q 026024          236 TI  237 (244)
Q Consensus       236 ~~  237 (244)
                      ..
T Consensus       150 ~y  151 (381)
T KOG0638|consen  150 GY  151 (381)
T ss_pred             cc
Confidence            43

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.67  E-value=0.0017  Score=50.98  Aligned_cols=124  Identities=19%  Similarity=0.198  Sum_probs=73.4

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      +...+.||.+.|.|.++...|+ +.|||+.+.+..  .....++-.                     +...+.|...+..
T Consensus         6 g~~G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hr--sk~v~l~rQ---------------------G~I~~vln~ep~s   61 (139)
T PF14696_consen    6 GLDGFDFVEFAVPDAQALAQLF-TALGFQPVARHR--SKDVTLYRQ---------------------GDINFVLNSEPDS   61 (139)
T ss_dssp             -EEEEEEEEEE-SSTTSCHHHH-CCCCEEEECCEC--CCSEEEEEE---------------------TTEEEEEEEESTS
T ss_pred             CCCCeEEEEEecCCHHHHHHHH-HHhCcceEEecC--CcceEEEEe---------------------CCEEEEEeCCCcc
Confidence            4567999999999977777777 679999987753  222222211                     1344545332111


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      .. ..+. ...|    .+..-++|.|+|.+++++++.++|.+....+....--.+.-|+-+.|-++-|+++...
T Consensus        62 ~a-~~~~-~~HG----~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   62 FA-AEFA-AQHG----PSVCAIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             CH-HHHH-HHHS----SEEEEEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             hH-HHHH-HhcC----CEEEEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEecCCC
Confidence            00 0000 0112    2777899999999999999999999988776322223456689999999999998653

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.79  E-value=0.0012  Score=57.77  Aligned_cols=135  Identities=18%  Similarity=0.280  Sum_probs=82.2

Q ss_pred             CCceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceee-ecCCCcEEEEee
Q 026024           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW-TFGKPATIELTH  159 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~leL~~  159 (244)
                      ...-+++|+...++  .++.++.||.+.|||.-.+..+.+.-..  -+-             ....| ..+....|.+.-
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~t--e~S-------------aLrs~vlan~~esi~mpi  238 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHT--EYS-------------ALRSIVLANYEESIKMPI  238 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhh--HHH-------------HHHHHHHhcCCccEEEec
Confidence            44567999999999  7889999999999998776654221110  000             00011 111123333322


Q ss_pred             cCCCCCC------CCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCC-----------------c-
Q 026024          160 NWGTESD------PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-----------------L-  215 (244)
Q Consensus       160 ~~~~~~~------~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~-----------------~-  215 (244)
                      +....+.      ..+..|+.|    .|.+||++.++|+-.+.+.++++|+++..+|....                 . 
T Consensus       239 nEp~~G~k~ksQIqeyv~y~gG----~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~  314 (381)
T KOG0638|consen  239 NEPAPGKKKKSQIQEYVEYHGG----AGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIK  314 (381)
T ss_pred             cCCCCCCccHHHHHHHHHhcCC----CceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHH
Confidence            2111110      112224444    39999999999999999999999999998773100                 0 


Q ss_pred             ----ceEEEEECCCCCEEEEEecCC
Q 026024          216 ----KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       216 ----~~~~~~~DPdG~~IEi~e~~~  236 (244)
                          -++..=.|-.|+++.|+...-
T Consensus       315 ~l~el~ILvD~De~gyLLQIFTKpl  339 (381)
T KOG0638|consen  315 LLEELGILVDFDENGYLLQIFTKPL  339 (381)
T ss_pred             HHHHcCeEEecCCCcEEeeeecccc
Confidence                123333577799999987643

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.72  E-value=0.085  Score=40.02  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=28.9

Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          183 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       183 ~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                      ..|++.++|   +++++++|.+.|-         +...+..++|..|..|.|+
T Consensus        73 ~sl~i~~~~~ee~~~~f~~Ls~gG~---------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   73 ISLCIECDDEEEIDRIFDKLSEGGQ---------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHTTTE---------TCCEEEEEE-TTS-EEEEE
T ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCC---------ccceeEEEEeCCCCEEEeC
Confidence            488899986   5567788877775         2234567999999999885

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.99  E-value=0.02  Score=42.47  Aligned_cols=55  Identities=27%  Similarity=0.244  Sum_probs=40.4

Q ss_pred             eEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCC-CEEEEEecCCC
Q 026024          183 GHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD-YWIEIFDLKTI  237 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG-~~IEi~e~~~~  237 (244)
                      +|++|.|+|++++.+.+.+ .|+........ ....+..++..++| ..|||+++..-
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~   58 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDG   58 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESST
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCC
Confidence            5999999999999999998 89876543321 22224566788888 68999997653

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.91  E-value=0.038  Score=40.80  Aligned_cols=93  Identities=18%  Similarity=0.301  Sum_probs=42.3

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+.+..+.|.|.| +++..||+++||-++                                      ...|.+.+..|+.
T Consensus         3 ~F~~e~i~LNV~d-~~~~~fy~~~f~~~~--------------------------------------~~~l~f~ea~G~D   43 (101)
T PF14507_consen    3 QFEFESIELNVPD-AKSQSFYQSIFGGQL--------------------------------------PFFLTFQEAQGPD   43 (101)
T ss_dssp             SEEE-EEEEEE-T--T---S--H---HHH--------------------------------------TTTEEEEE---CC
T ss_pred             ceEEEEEEEeCCC-hhHHHHHHhccccCC--------------------------------------CceEEEeeccCCc
Confidence            3678889999999 889999999986211                                      1122332222211


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEE
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWI  229 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~I  229 (244)
                             ....+....++-.+-|.|+   |+.++.+++.+.++ ++..-     ..++.+.||.|..|
T Consensus        44 -------L~~~~~~twDLe~Lkf~V~~~~Dl~~L~~~le~~~~-fidKk-----~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   44 -------LTIENNETWDLEMLKFQVPKDFDLAALKSHLEEQEF-FIDKK-----EKFLVTSDPSQIEL   98 (101)
T ss_dssp             -------GSS-TTSBSSEEEEEEEES-S--HHHHHHHTTTS-E-E--TT------SEEEEE-TTS-EE
T ss_pred             -------cccCCCcEEeeEEEEEEecCcccHHHHHHHhcccce-EecCC-----ceEEEEECCcceEE
Confidence                   1111111235667888998   68888888887443 22222     34577899998543

>PF15067 FAM124: FAM124 family

Probab=95.50  E-value=0.16  Score=43.03  Aligned_cols=108  Identities=15%  Similarity=0.175  Sum_probs=61.0

Q ss_pred             ceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           85 GYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        85 ~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      |-.+-.+.|.|+  |.+.+++||+-+|+-+......    .|..+-+ +...                 +..|.|.-..-
T Consensus       126 G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~FC~F~l-ys~~-----------------~~~iQlsLK~l  183 (236)
T PF15067_consen  126 GKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DFCFFTL-YSQP-----------------GLDIQLSLKQL  183 (236)
T ss_pred             cccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----CcEEEEE-ecCC-----------------CeEEEEEeccC
Confidence            335566889999  9999999999999988765532    2433222 2111                 34455432111


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEE
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  231 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi  231 (244)
                      +.+   ..      +.|.--.-+.|.|.|+.++.--|- +.+   .+...+.+    -.+|||||.|-+
T Consensus       184 p~~---~~------p~p~esavLqF~V~~igqLvpLLP-npc---~PIS~~rW----qT~D~DGNkILL  235 (236)
T PF15067_consen  184 PPG---MS------PEPTESAVLQFRVEDIGQLVPLLP-NPC---SPISETRW----QTEDYDGNKILL  235 (236)
T ss_pred             CCC---CC------cccccceEEEEEecchhhhcccCC-CCc---ccccCCcc----eeeCCCCCEecc
Confidence            111   00      111122478999999988754332 121   12222222    468999999854

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=95.16  E-value=0.41  Score=42.93  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=68.2

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+.+.+|.+.|.|.+.++.=|-..|||.........  ...++-                       ...+.++-+..+.
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~v~l~r-----------------------QGdinlvvn~~~~   74 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--AVTLYR-----------------------QGDINLVVNAEPD   74 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--ceeEEE-----------------------eCCEEEEEcCCCc
Confidence            678889999999996666666678999887654311  122221                       1223333222111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCC----------CCCcceEEEEECCCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD----------GGKLKGVAFIKDPDD  226 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~----------~g~~~~~~~~~DPdG  226 (244)
                      +  ....+-.  ..+.+..-++|.|+|.+.++++.++.|.+....+.          .+..+.++|+.|.+|
T Consensus        75 s--~a~~f~~--~Hgps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          75 S--FAAEFLD--KHGPSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             c--hhhHHHH--hcCCchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            1  0001111  11235678999999999999999999996554332          123345788888883

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=93.70  E-value=0.44  Score=37.97  Aligned_cols=57  Identities=32%  Similarity=0.509  Sum_probs=41.0

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecC----C----CC---------Cc--ceEEEEECCCCCEEEEEecCC
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKP----D----GG---------KL--KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p----~----~g---------~~--~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +++.|+++.|.|+++..+-.++ .|.++..++    .    .+         ..  -.++++..++|..||+++...
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            4789999999999999999977 798875321    0    01         11  124566767788999999754

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.16  E-value=1.1  Score=34.20  Aligned_cols=47  Identities=15%  Similarity=0.239  Sum_probs=32.0

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE  132 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~  132 (244)
                      .-.+.|+++.|.|++++.+-.++ .|.++..............|+...
T Consensus        85 ~~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DP  131 (142)
T cd08353          85 ALGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGP  131 (142)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECC
Confidence            34688999999999999999966 688877532211223445566543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.15  E-value=1.2  Score=32.60  Aligned_cols=55  Identities=20%  Similarity=0.236  Sum_probs=38.0

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCC-cceEEEEECCCCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      +++|+++.|+|++++.+..++ .|.++........ ....+.+..+++..+|++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcC
Confidence            678999999999999999985 7998865432111 111233455677788887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=91.84  E-value=1.1  Score=32.82  Aligned_cols=56  Identities=18%  Similarity=0.309  Sum_probs=38.7

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCC-cceEEEEECC---CCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGK-LKGVAFIKDP---DDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~-~~~~~~~~DP---dG~~IEi~e~~~  236 (244)
                      |++|+++.|+|+++..+..++ .|.++..... .+. .....++.+.   +|..++|++...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            457999999999999999986 6998765432 111 1223445554   677899987644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=91.73  E-value=0.17  Score=40.81  Aligned_cols=51  Identities=25%  Similarity=0.446  Sum_probs=29.2

Q ss_pred             ceEEEEEeCCHHHHHHHH-HHCCCeEEecCCCCC---cceEEEEECCCCCEEEEEecC
Q 026024          182 FGHIGITVDDVYKACERF-ERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       182 ~~hi~f~VdDvd~~~~rl-~~~Gv~v~~~p~~g~---~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      +.|+.+.|+|++++.+++ +..|+.+........   ...+++|  +|| .|||+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeC
Confidence            369999999999999999 788999886543332   2235555  667 99999854

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.14  E-value=1.3  Score=33.02  Aligned_cols=53  Identities=19%  Similarity=0.315  Sum_probs=38.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHHC----CCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          181 GFGHIGITVDDVYKACERFERL----GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~----Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      |++|+++.|+|++++.+...+.    |.++......    ...|+...++..|+|.+....
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~----~~~~~~~~~~~~i~l~~~~~~   57 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED----GRSWRAGDGGTYLVLQQADGE   57 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc----CceEEecCCceEEEEEecccC
Confidence            4579999999999999988875    9887765421    123433356778888887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=90.14  E-value=1.3  Score=35.38  Aligned_cols=49  Identities=16%  Similarity=0.213  Sum_probs=35.8

Q ss_pred             CCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcE-EEEEeecCC
Q 026024           82 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYED  133 (244)
Q Consensus        82 ~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~~~  133 (244)
                      ...+-.++||+|.|+|++++..-+++ +|.+......  +++. .++|+...+
T Consensus       110 N~~prGfgHIci~V~di~sac~~lke-kGV~f~Kk~~--dGk~K~iaF~~dpD  159 (170)
T KOG2944|consen  110 NKEPRGFGHICIEVDDINSACERLKE-KGVRFKKKLK--DGKMKPIAFLHDPD  159 (170)
T ss_pred             CCCCCccceEEEEeCCHHHHHHHHHH-hCceeeecCC--CccccceeEEECCC
Confidence            34456799999999999999999965 9999666543  4443 566666543

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=88.68  E-value=2.1  Score=31.50  Aligned_cols=53  Identities=28%  Similarity=0.319  Sum_probs=37.5

Q ss_pred             eEEEEEeCCHHHHHHHHHH-CCCeEEecCCCC--CcceEEEEECCCCCEEEEEecCC
Q 026024          183 GHIGITVDDVYKACERFER-LGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g--~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .|+.|.|+|+++..+...+ .|.+........  ......++.. +|..++|++...
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   57 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLD   57 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECC
Confidence            5999999999999999987 788876543221  1122455554 688899998643

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=88.51  E-value=2.5  Score=29.50  Aligned_cols=52  Identities=25%  Similarity=0.320  Sum_probs=39.5

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          184 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       184 hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      |+.+.|.|+++..+...+ .|.+....... .....+++.+. +..|+|.+....
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~~~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-GGAEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-CCEEEEEEecC-CceEEEecCCCC
Confidence            788999999999999998 89988776642 11234566665 789999987654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PLN02367 lactoylglutathione lyase

Probab=87.89  E-value=3  Score=35.63  Aligned_cols=55  Identities=15%  Similarity=0.117  Sum_probs=39.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ..++|++|.|.|++++.+-.++ .|.+++..... +....++|+...+                  +..|||++.
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~-g~~~riaFIkDPD------------------Gn~IEL~e~  222 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPND-GKMKGIAFIKDPD------------------GYWIEIFDL  222 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCcc-CCceEEEEEECCC------------------CCEEEEEec
Confidence            4689999999999999999955 99998864332 2113455665433                  678898764

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.67  E-value=2.3  Score=30.13  Aligned_cols=53  Identities=17%  Similarity=0.188  Sum_probs=36.6

Q ss_pred             eEEEEEeCCHHHHHHHHH-HCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          183 GHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~-~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      +|+++.|+|++++.+... -.|.++...+...  ....++...++..++|.+....
T Consensus         2 ~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~i~l~~~~~~   55 (114)
T cd07245           2 DHVALRVPDLEASRAFYTDVLGLEEGPRPPFL--FPGAWLYAGDGPQLHLIEEDPP   55 (114)
T ss_pred             CeEEEecCCHHHHHHHHHHccCCcccCcCCCC--CCceEEEeCCCcEEEEEecCCC
Confidence            699999999999999887 4688776544322  1224555555667888876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=87.43  E-value=3.8  Score=31.20  Aligned_cols=57  Identities=9%  Similarity=-0.029  Sum_probs=40.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      -.+.|+++.|.|++++.+-.++ .|.+++............+|+...+                  +..+++++..
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~------------------G~~ie~~~~~  124 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYG------------------DSLHTLVDRK  124 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccC------------------CcEEEEEecC
Confidence            3577999999999998888754 7988876544323334556665433                  6788988653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=87.37  E-value=3.3  Score=32.74  Aligned_cols=51  Identities=14%  Similarity=0.189  Sum_probs=36.5

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEEC--CCCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKD--PDDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~D--PdG~~IEi~e~~  235 (244)
                      |++||++.|+|+++..+...+ .|.++.....    ....++.+  .+|..|++++..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG----DRVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC----CEEEEEecCCCCCCEEEEEeCC
Confidence            568999999999999998876 5988765442    12233332  358899998863

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.28  E-value=3.2  Score=29.80  Aligned_cols=52  Identities=19%  Similarity=0.142  Sum_probs=35.5

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCC--CEEEEEecC
Q 026024          184 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDD--YWIEIFDLK  235 (244)
Q Consensus       184 hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG--~~IEi~e~~  235 (244)
                      |+++.|.|+++..+..++ .|.++............+++.++++  ..++|.+..
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCC
Confidence            889999999999999987 8999876542111223455666654  456666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=86.49  E-value=3.8  Score=29.81  Aligned_cols=53  Identities=21%  Similarity=0.268  Sum_probs=36.4

Q ss_pred             eEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCCcceEEEEECCC---CCEEEEEecC
Q 026024          183 GHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDLK  235 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~~~~~~~~~DPd---G~~IEi~e~~  235 (244)
                      .|+++.|+|++++.+..++ .|.++..... .......+++..++   +..+++.+..
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecC
Confidence            6999999999999999987 4998875432 11111234555554   5788887653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.79  E-value=5.2  Score=29.37  Aligned_cols=50  Identities=16%  Similarity=0.291  Sum_probs=36.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCC-CCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPd-G~~IEi~e~~  235 (244)
                      .++|+.+.|+|+++..+...+ .|.++.....     ..+++...+ +..|.|.+..
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~-----~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD-----STAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC-----CEEEEecCCCeEEEEEEeCC
Confidence            357999999999999999986 7998876631     124455544 5677777754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.65  E-value=5.6  Score=28.96  Aligned_cols=55  Identities=16%  Similarity=0.144  Sum_probs=35.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCCcceEEEEECCCCCEEEEEecCC
Q 026024          182 FGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       182 ~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++|+++.|+|+++..+-.++ .|.++..... ........|+.-.+|..|++++...
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   58 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPD   58 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcc
Confidence            36999999999999988877 5887643211 1111123344434678899987543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=85.14  E-value=5.8  Score=29.36  Aligned_cols=29  Identities=7%  Similarity=0.104  Sum_probs=23.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEE
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLK  115 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~  115 (244)
                      ..+.|+++.|.|++++.+-..+ .|.++..
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            3578999999999999887755 7988764

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=84.84  E-value=5.6  Score=31.15  Aligned_cols=55  Identities=20%  Similarity=0.350  Sum_probs=36.6

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC----CCcceEEEEE-CCCCCEEEEEec
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG----GKLKGVAFIK-DPDDYWIEIFDL  234 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~----g~~~~~~~~~-DPdG~~IEi~e~  234 (244)
                      .++.|++|.|+|+++..+..++ .|.++......    +.....+|++ +..++.|.+.+.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~   68 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG   68 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC
Confidence            4788999999999999998876 79987643211    1122334443 455677777554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PRK10291 glyoxalase I; Provisional

Probab=83.90  E-value=5.5  Score=29.76  Aligned_cols=56  Identities=11%  Similarity=0.080  Sum_probs=37.6

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEee-eCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      -.++|+++.|.|++++.+-.++ .|.++.... ..+.+....+|+...+                  +..|||++.
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPd------------------G~~iel~~~  120 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPD------------------GYKIELIEE  120 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCC------------------CCEEEEEEc
Confidence            3688999999999999888855 788776432 2223323345555433                  688999764

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=83.69  E-value=5.8  Score=32.54  Aligned_cols=55  Identities=18%  Similarity=0.153  Sum_probs=37.9

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      -.++|++|.|.|++++.+.+++ .|+++...... .....+.|+...+                  +..|||++.
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~~-~~~~~~~fi~DPd------------------G~~IEl~e~  174 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPDD-GKMKGLAFIKDPD------------------GYWIEIFDL  174 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCcc-CCceeEEEEECCC------------------CCEEEEEEC
Confidence            3688999999999999999855 89988754321 2123445555433                  678898764

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=83.58  E-value=12  Score=30.68  Aligned_cols=32  Identities=13%  Similarity=0.229  Sum_probs=24.3

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLL  114 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~  114 (244)
                      -..+.++|++++|.+.+.+.+|.+..+-....
T Consensus        30 l~~~~~DHialRvn~~~~A~~~~~~l~~~G~l   61 (185)
T PF06185_consen   30 LSQYEIDHIALRVNSNETAERWKQALLQCGEL   61 (185)
T ss_dssp             -TT-EEEEEEEE-S-HHHHHHHHHHHTTTEEE
T ss_pred             ccccCCcEEEEecCCHHHHHHHHHHHHHhChh
Confidence            35689999999999999999999998876543

; PDB: 1K4N_A.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=82.89  E-value=8.8  Score=28.65  Aligned_cols=52  Identities=15%  Similarity=0.295  Sum_probs=36.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECC--CCCEEEEEecCC
Q 026024          182 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP--DDYWIEIFDLKT  236 (244)
Q Consensus       182 ~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DP--dG~~IEi~e~~~  236 (244)
                      +.|+.+.|+|+++..+...+ .|.++......   ....|+...  .+..+++++...
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~   56 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL---GGLVFLSRDPDEHHQIALITGRP   56 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC---CcEEEEEecCCCceEEEEEecCC
Confidence            46999999999999999987 79987654421   123455543  356788877543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PRK11700 hypothetical protein; Provisional

Probab=82.74  E-value=9  Score=31.49  Aligned_cols=30  Identities=7%  Similarity=0.047  Sum_probs=25.7

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMS  112 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~  112 (244)
                      -..+..+|++|+|.+.+.|.+|.+..+-+.
T Consensus        35 l~~~~~DHialR~n~~~tAe~w~~~l~~~G   64 (187)
T PRK11700         35 LSQLEADHIALRCNQNETAERWRQGFLQCG   64 (187)
T ss_pred             cccccCcEEEEeeCCHHHHHHHHHHHHHhc
Confidence            345789999999999999999999887554

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=82.64  E-value=6.2  Score=28.90  Aligned_cols=48  Identities=23%  Similarity=0.320  Sum_probs=31.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          183 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      .|+.+.|+|+++..+-.+..|.++......  . ..+.+.-++|..|.+.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~--~-~~~~~~~~~~~~l~l~~   49 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADD--E-PHVEAVLPGGVRLAWDT   49 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCC--C-CcEEEEeCCCEEEEEEc
Confidence            599999999999999888789876432211  1 12334445565555443

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=82.64  E-value=12  Score=27.00  Aligned_cols=53  Identities=32%  Similarity=0.521  Sum_probs=36.6

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCC---CCCcceEEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD---GGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~---~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      |++|+++.|.|+++..+...+ .|.++.....   ........++...+. .+++...
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~   57 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFLN   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc-ceeeeee
Confidence            468999999999999998887 6999887553   122223455555554 4565554

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=82.36  E-value=9.1  Score=28.90  Aligned_cols=51  Identities=24%  Similarity=0.348  Sum_probs=34.6

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECC---CCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP---DDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DP---dG~~IEi~e~~  235 (244)
                      .+.|++|.|+|+++..+-.++ .|.++......    ...|++..   ..+.|++.+..
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~----~~~~~~~~~~~~~~~i~l~~~~   57 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG----RGAFLRAAGGGDHHNLFLIKTP   57 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC----cEEEEECCCCCCCcEEEEecCC
Confidence            668999999999999998876 69987654321    12455443   23567776543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=81.98  E-value=6  Score=27.73  Aligned_cols=51  Identities=14%  Similarity=0.107  Sum_probs=36.4

Q ss_pred             CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCCCCC
Q 026024          191 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG  241 (244)
Q Consensus       191 Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~~~~  241 (244)
                      ..+++.+.+++.|+++...-.+......+...|.||+.+||.=....+.+.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~vD~~tG~V~   80 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYVDPATGEVV   80 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEEcCCCCeEe
Confidence            689999999999997765332111123577899999999998766655543

This is family M4 in the peptidase classification.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=81.41  E-value=10  Score=27.47  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=24.9

Q ss_pred             cceEEEEEeCCHHHHHHHHHHCCCeEEec
Q 026024          181 GFGHIGITVDDVYKACERFERLGVEFAKK  209 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~  209 (244)
                      ++.|++|.|+|+++..+.....|.++...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            56899999999999998888889887643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=81.08  E-value=6.8  Score=32.11  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=39.5

Q ss_pred             cceEEEEEeC--CHHHHHHHHHH-CCCeEEecCCC-C--CcceEEEEECCCC-CEEEEEecCC
Q 026024          181 GFGHIGITVD--DVYKACERFER-LGVEFAKKPDG-G--KLKGVAFIKDPDD-YWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~Vd--Dvd~~~~rl~~-~Gv~v~~~p~~-g--~~~~~~~~~DPdG-~~IEi~e~~~  236 (244)
                      ++.|+++.|+  |++++.+..++ .|.+....... .  ......++..|+| ..|+|.++..
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5689999999  99999999866 79987653321 1  1123456777775 5688888654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=80.17  E-value=7  Score=28.68  Aligned_cols=52  Identities=25%  Similarity=0.406  Sum_probs=33.9

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEec
Q 026024          182 FGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       182 ~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      +.|+++.|+|++++.+..++ .|.++...... .......++. +++..|+|++.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIA-LGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEe-cCCEEEEEEec
Confidence            46999999999999999985 69887543211 1111233333 44678888874

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	244
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		9e-61
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		5e-57
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		6e-57
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-56
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-19
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-13

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  229 bits (584), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 142 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 175

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  217 bits (552), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 27  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 86
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 87  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 145
Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 146 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 179

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  214 bits (545), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 95/154 (61%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 80  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           D +T  + +Q+TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 200 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           E LGV+F KKPD GK+KG+AFI+DPD YWI+I +
Sbjct: 142 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILN 175

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 27/154 (17%)
Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY      P         
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-----GPET------- 50
Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
              + A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    
Sbjct: 51  ---EEAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVT 97
Query: 208 KK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 239
           ++  P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 98  REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+          
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS---------- 58
Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  +ELT+N+G  S                +GHI I V+DV +      +  V   
Sbjct: 59  -----TVLELTYNYGVTS----------YKHDEAYGHIAIGVEDVKELVADMRKHDVPID 103
Query: 208 KKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 237
            + + G +   AF+ DPD Y+IE+ + KT+
Sbjct: 104 YEDESGFM---AFVVDPDGYYIELLNEKTM 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	244
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-73
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	7e-56
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-52
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-39
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-27
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-24
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-24
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-22
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	9e-21
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	7e-20
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	3e-17
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	9e-16
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-15
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-12
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-12
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-12
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	4e-12
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	6e-12
3ghj_A	141	Putative integron gene cassette protein; integron	1e-10
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	3e-10
3huh_A	152	Virulence protein STM3117; structural genomics, ny	4e-10
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	4e-10
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	8e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-09
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	1e-09
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	3e-09
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	6e-09
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-08
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	4e-08
1nki_A	135	Probable fosfomycin resistance protein; potassium	8e-08
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	1e-07
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-07
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-07
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-07
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-07
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	5e-07
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-06
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	1e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	7e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	7e-05

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  219 bits (560), Expect = 4e-73
 Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 4/184 (2%)

Query: 60  MASSEPKE---SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR 116
           MA  +P     +        +  D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 117 LDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGN 176
           LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D     YHNGN
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS-YHNGN 119

Query: 177 SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT 236
           S+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   
Sbjct: 120 SDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK 179

Query: 237 IGKI 240
           I  I
Sbjct: 180 IATI 183

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  174 bits (442), Expect = 7e-56
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETE----------- 51

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                A IELT+NWG +                 +GHI ++VD+  +ACE+  + G    
Sbjct: 52  ----EAVIELTYNWGVDK----------YELGTAYGHIALSVDNAAEACEKIRQNGGNVT 97

Query: 208 K--KPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 239
           +   P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 98  REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  166 bits (422), Expect = 1e-52
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 28/148 (18%)

Query: 86  YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
             M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+        
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST------- 59

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                    +ELT+N+G  S      Y +       +GHI I V+DV +      +  V 
Sbjct: 60  --------VLELTYNYGVTS------YKHDE----AYGHIAIGVEDVKELVADMRKHDVP 101

Query: 206 FAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
              + + G +   AF+ DPD Y+IE+ +
Sbjct: 102 IDYEDESGFM---AFVVDPDGYYIELLN 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  131 bits (330), Expect = 6e-39
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D   S +FY   LG  +++    P+       L   D                 
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI---------------- 52

Query: 151 KPATIELTHNWGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
               +E+  N  T+S+        +   E  G  H+   V+DV  + +    LG+   + 
Sbjct: 53  ---ELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEV 109

Query: 210 P-DGGKLKGVAFIKDPDDYWIEIF 232
             D    K +AF  DPD   +E+ 
Sbjct: 110 RYDDYTGKKMAFFFDPDGLPLELH 133

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  100 bits (252), Expect = 3e-27
 Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 27/143 (18%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 + + + +FY   LG  +L+    PE       L                     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ---------------- 52

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               +E+  +    + P          E  G  H+   V+ + +        G+E     
Sbjct: 53  ---ELEIFISDQFPARPS-------YPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLR 102

Query: 211 -DGGKLKGVAFIKDPDDYWIEIF 232
            D    K + F  DPD   +E+ 
Sbjct: 103 VDDFTGKKMTFFFDPDGLPLELH 125

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 94.0 bits (234), Expect = 1e-24
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +      + D + +  FY  +LG  + + +  PE   S+ F+   +T             
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT------------- 52

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  +EL H  G +S           ++  G  HI I VD++  A    ++  +   
Sbjct: 53  ------KMELLHPLGLDSPIA---GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSL 103

Query: 208 KKP--DGGKLKGVAFI--KDPDDYWIEIF 232
            +    G   K V F+  KD     +E+ 
Sbjct: 104 SEEVKIGAHGKPVIFLHPKDCGGVLVELE 132

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 93.7 bits (233), Expect = 3e-24
 Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 27/148 (18%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +      +   K  L FY   L + LL   D P     + FL   ++             
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES------------- 55

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
                  IEL      ES         G        HI I V  + +  +  +  GV+  
Sbjct: 56  ------KIELLEPLSEESPIAKFIQKRGEG----IHHIAIGVKSIEERIQEVKENGVQMI 105

Query: 208 -KKP-DGGKLKGVAFI--KDPDDYWIEI 231
             +P  G +   VAF+  +       E 
Sbjct: 106 NDEPVPGARGAQVAFLHPRSARGVLYEF 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 87.5 bits (217), Expect = 4e-22
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 27/144 (18%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             + +K+   +L  + R+  +   + +     K  + F+                     
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY---------------- 54

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               +EL    G +S P  K    G        HI   V+D+ K+ E   ++G    KK 
Sbjct: 55  ---RVELVAPDGEDS-PINKTIKKG----STPYHICYEVEDIQKSIEEMSQIGYTLFKKA 106

Query: 211 ---DGGKLKGVAFIKDPDDYWIEI 231
                   + VAF+   D   IE+
Sbjct: 107 EIAPAIDNRKVAFLFSTDIGLIEL 130

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 84.1 bits (208), Expect = 9e-21
 Identities = 21/148 (14%), Positives = 40/148 (27%), Gaps = 37/148 (25%)

Query: 88  MQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 145
           + Q + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +   
Sbjct: 5   ILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL--- 61

Query: 146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 205
                                           +P         VD + K     E  G E
Sbjct: 62  --------------------------------KPFRNTQATFLVDSLDKFKTFLEENGAE 89

Query: 206 FAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
             + P          ++  D   IE  +
Sbjct: 90  IIRGPSKVPTGRNMTVRHSDGSVIEYVE 117

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 81.5 bits (201), Expect = 7e-20
 Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 30/145 (20%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 + +    FY    G +     +     F+ YFL +ED                 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---------------- 50

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFA 207
             A +E+                    E  G+ HI I+    + V +  E+  + G   A
Sbjct: 51  --ARLEIMSRTDVTGKT--------TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIA 100

Query: 208 KKP-DGGKLKGVAFIKDPDDYWIEI 231
            +P   G     + + DP+   IEI
Sbjct: 101 GEPRMTGDGYYESVVLDPEGNRIEI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 75.3 bits (185), Expect = 3e-17
 Identities = 23/144 (15%), Positives = 39/144 (27%), Gaps = 21/144 (14%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               ++D + S  FY  +LG+  L   + P     L                    +   
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTEL------------VASGKVANFITP 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAK 208
               ++L                          H+   +D     +A        +  A 
Sbjct: 71  DGTILDLFGEPELSPPDPNPEK-----TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAH 125

Query: 209 KP-DGGKLKGVAFIKDPDDYWIEI 231
            P      +GV +  DPD + IEI
Sbjct: 126 GPVTRPTGRGV-YFYDPDGFMIEI 148

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 71.0 bits (174), Expect = 9e-16
 Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 11/142 (7%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               ++    ++ F+   +G++L  R +  E +++    G        A      + T  
Sbjct: 15  VSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIA-----MMVTPD 67

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
             + IEL+      +  D +          G+  +  TV+D+ +   R  + G E   + 
Sbjct: 68  GHSRIELSRFLTPPTIADHR---TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV 124

Query: 211 -DGGKLKGVAFIKDPDDYWIEI 231
                   + +I+  +   I +
Sbjct: 125 VQYENSYRLCYIRGVEGILIGL 146

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 70.1 bits (171), Expect = 2e-15
 Identities = 22/143 (15%), Positives = 39/143 (27%), Gaps = 22/143 (15%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
            T   + D   +  FY+  LG  +   +     ++           +             
Sbjct: 29  LTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQ------------ 76

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                + L  +      P  +          G       VDD+    ER   LGV F ++
Sbjct: 77  -----LLLEPSSHAAVTPFKEALVAD-----GIPAASFAVDDIAAEYERLSALGVRFTQE 126

Query: 210 PDGGKLKGVAFIKDPDDYWIEIF 232
           P        A + D     I++ 
Sbjct: 127 PTDMGPVVTAILDDTCGNLIQLM 149

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 62.4 bits (151), Expect = 1e-12
 Identities = 22/150 (14%), Positives = 34/150 (22%), Gaps = 35/150 (23%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
                D  VS  F+  VLG  +    + P+ +F    L   D                  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVM-------------LEG 54

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 210
            A        G    P   G            +    V D+    +R      +      
Sbjct: 55  IAGKSRKWLSGDLEFPLGSGV-----------NFQWDVIDIEPLYQRVNESAADSIYLAL 103

Query: 211 ------DGGKLKGV--AFIKDPDDYWIEIF 232
                  G  +       ++ PD Y     
Sbjct: 104 ESKSYQCGDSIATQKQFMVQTPDGYLFRFC 133

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 61.4 bits (149), Expect = 2e-12
 Identities = 16/142 (11%), Positives = 35/142 (24%), Gaps = 35/142 (24%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
           Q    +   + +  FY   +GM  + + +  + +   +F           +         
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ-------- 66

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 209
                                     N  P    H    V  + +  +   + G+E    
Sbjct: 67  --------------------------NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDD 100

Query: 210 PDGGKLKGVAFIKDPDDYWIEI 231
                +    ++ DP    IE 
Sbjct: 101 HARPDVIRF-YVSDPFGNRIEF 121

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 61.3 bits (149), Expect = 3e-12
 Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 31/140 (22%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 155
           +D  +S  +Y+ +L    L R       F                               
Sbjct: 14  RDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPGG-------------------LS 52

Query: 156 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 212
            +           F           G  H+  +V    D+    ER  + G  F    + 
Sbjct: 53  IVLREHDGGGTDLFDETR------PGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQEL 106

Query: 213 GKLKGVAFIKDPDDYWIEIF 232
                +AF +D D+  +E  
Sbjct: 107 PFGWILAF-RDADNIALEAM 125

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 29/144 (20%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           T     D   +  FY  V G+ ++ +                         +   +  F 
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLK-------------------------LPGQLVFFK 46

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFA 207
               + L  +    S  D       +    G GH     D   +V +   RFE L +   
Sbjct: 47  CGRQMLLLFDPQESSRADANNPIPRH-GAVGQGHFCFYADDKAEVDEWKTRFEALEIPVE 105

Query: 208 KKPDGGKLKGVAFIKDPDDYWIEI 231
                       +I+DP    +E+
Sbjct: 106 HYHRWPNGSYSVYIRDPAGNSVEV 129

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 60.3 bits (146), Expect = 6e-12
 Identities = 19/147 (12%), Positives = 37/147 (25%), Gaps = 31/147 (21%)

Query: 94  RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 153
                   + FY   L +  +         +     G                       
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DY 59

Query: 154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP 210
            +E T   G  + P           P     +   V +   +     + + +G +  +  
Sbjct: 60  HLEFTQYEGGSTAPV----------PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESE 109

Query: 211 DGGKLKGVAFIKDPDDYWIEIFDLKTI 237
           +     G   I+DPD + I   + K I
Sbjct: 110 NPYWSNGGVTIEDPDGWRIVFMNSKGI 136

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 40/144 (27%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
              ++K+ + S  FY+ +LG            +++  ++                    G
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-------------------G 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAK 208
           +   + L      + + +               H    V+  ++    +  E  GV    
Sbjct: 71  RAGMVVL------QEEKENWQQQ----------HFSFRVEKSEIEPLKKALESKGVSVHG 114

Query: 209 KPDGGKLKGVA-FIKDPDDYWIEI 231
             +   ++ V+ +  DP+ + +E 
Sbjct: 115 PVNQEWMQAVSLYFADPNGHALEF 138

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 56.1 bits (135), Expect = 3e-10
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 37/157 (23%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
               +  ++D   S  FY   LG+ +L+        F L+  G+                
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGF---------------A 49

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF- 206
                +  E      +++   +               +     DV  A +      VE  
Sbjct: 50  IHEGRSLEETIWRTSSDAQEAYGR---------RNMLLYFEHADVDAAFQDIAP-HVELI 99

Query: 207 ---AKKPDGGKLKGVAFIKDPDDYWIEIF-DLKTIGK 239
               ++  G +   V    DPD + IE+   L   G+
Sbjct: 100 HPLERQAWGQR---VFRFYDPDGHAIEVGESLSQSGE 133

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 35/143 (24%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D   ++ FY  VLG S +    F + + +L F                        
Sbjct: 29  LTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQ--------------------- 64

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
             I L H    E +P           P       IT   +        + G+   + P  
Sbjct: 65  -KINL-HQQEMEFEP-----KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVE 117

Query: 211 -DGGKLKGVA-FIKDPDDYWIEI 231
             G   + ++ +I+DPD   IEI
Sbjct: 118 RTGATGEIMSIYIRDPDGNLIEI 140

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 37/145 (25%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
           +  +K  K +  FYS++LGM   + + F E + +L F                       
Sbjct: 32  VMTVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQ-------------------- 68

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 210
                L H  G E +P        +  P       IT   + +  +  +   V   + P 
Sbjct: 69  --KFNL-HEVGKEFEP-----KAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPV 120

Query: 211 ----DGGKLKGVAFIKDPDDYWIEI 231
                 G +  + + +DPD   IE+
Sbjct: 121 PRTGAKGPIMSI-YFRDPDRNLIEV 144

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 54.8 bits (132), Expect = 8e-10
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 38/143 (26%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D + S+ F+  +LG++L  R +        Y    +                  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT-----GAYLTCGDLW---------------- 46

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAK 208
               + L+++   +  P          +   + H   TV  +D     +R E+ GV   K
Sbjct: 47  ----VCLSYDEARQYVP---------PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWK 93

Query: 209 KPDGGKLKGVAFIKDPDDYWIEI 231
           +          +  DPD + +E+
Sbjct: 94  QNKSEG-ASF-YFLDPDGHKLEL 114

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 53.6 bits (129), Expect = 1e-09
 Identities = 19/146 (13%), Positives = 35/146 (23%), Gaps = 44/146 (30%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D   + +F  +  G++                              +       
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRG------------------------NAFAVMRD 42

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA 207
                 LT   G E              P+ F H+G   +    V K  +R +  G    
Sbjct: 43  -NDGFILTLMKGKEVQY-----------PKTF-HVGFPQESEEQVDKINQRLKEDGFLVE 89

Query: 208 KKPDGGKLKGVAF-IKDPDDYWIEIF 232
                       F ++ P  + IE+ 
Sbjct: 90  PPKHAH---AYTFYVEAPGGFTIEVM 112

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 22/149 (14%), Positives = 38/149 (25%), Gaps = 23/149 (15%)

Query: 89  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 148
               +   D   +  +Y    G   L R + PE       +      +            
Sbjct: 11  DHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM--------- 61

Query: 149 FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-- 206
                 +++      ES        +         H+   VDD+          GV+   
Sbjct: 62  ----TQVQVMAPLNDESTVAKWLAKHNGRAG--LHHMAWRVDDIDAVSATLRERGVQLLY 115

Query: 207 --AKKPDGGKLKGVAFI--KDPDDYWIEI 231
              K   GG    + F+  K      IE+
Sbjct: 116 DEPKLGTGGNR--INFMHPKSGKGVLIEL 142

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 53.8 bits (129), Expect = 1e-09
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 35/149 (23%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           +          +  L FY R++G        F   K      G E   +           
Sbjct: 7   ITSITINTSHLQGMLGFY-RIIG------FQFTASKVDK---GSEVHRAVHNG------- 49

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL-GVEF 206
                    L                N          +G  + D+ K  +   ++ G   
Sbjct: 50  -----VEFSLY------------SIQNPQRSQIPSLQLGFQITDLEKTVQELVKIPGAMC 92

Query: 207 AKKPDGGKLKGVAFIKDPDDYWIEIFDLK 235
              P        A + DPD + IE+ +L+
Sbjct: 93  ILDPTDMPDGKKAIVLDPDGHSIELCELE 121

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 53.7 bits (129), Expect = 3e-09
 Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 24/161 (14%)

Query: 86  YFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 135
           + M + +  ++          D + SL  Y+   G+   +     +   +          
Sbjct: 8   HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGR--- 64

Query: 136 SAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA 195
             P     +  +    P  +EL       S   ++ + + N E  G  HI   V D+ + 
Sbjct: 65  --PTKARAKLAFFELGPLQLELIEPDENPST--WREFLDKNGE--GIHHIAFVVKDMDRK 118

Query: 196 CERFERLGVEFA-KKPDGGKLKGVAFI--KDPDDYWIEIFD 233
            E   R G++   K    G     A+I         IE+ +
Sbjct: 119 VEELYRKGMKVIQKGDFEG--GRYAYIDTLRALKVMIELLE 157

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 52.2 bits (125), Expect = 6e-09
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 37/144 (25%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
             + D   + +FY +VLGM     + F   + +L F   +                    
Sbjct: 16  LTVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKIN------------------ 54

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
                 H  G E +P        N          IT   +  A +  E  GV   + P  
Sbjct: 55  -----LHQLGNEFEP-----KAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVK 104

Query: 211 ---DGGKLKGVAFIKDPDDYWIEI 231
                G +    + +DPD   IE+
Sbjct: 105 RTGAQGAITSF-YFRDPDGNLIEV 127

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 35/148 (23%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
              +   + S+ F+  +LG                  LGYED             +  GK
Sbjct: 25  EINVDHLEESIAFWDWLLG-----------------ELGYEDYQ----SWSRGKSYKHGK 63

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 208
                 T+    +++  F+          G  H+       + V +  ++ +  G     
Sbjct: 64  ------TYLVFVQTEDRFQTPTFHRKRT-GLNHLAFHAASREKVDELTQKLKERGDPILY 116

Query: 209 KP----DGGKLKGVAFIKDPDDYWIEIF 232
           +      GG      F +DP+   +EI 
Sbjct: 117 EDRHPFAGGPNHYAVFCEDPNRIKVEIV 144

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 21/156 (13%), Positives = 44/156 (28%), Gaps = 43/156 (27%)

Query: 87  FMQQTMFRI-------KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           + Q  M           +P  S  FY  +LG+  ++                        
Sbjct: 18  YFQGHMTHPDFTILYVDNPPASTQFYKALLGVDPVESSP--------------------- 56

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKAC 196
                +++       + L      E      G         G G +   V++   V +  
Sbjct: 57  ---TFSLFVLANGMKLGLWSRHTVEPKASVTG---------GGGELAFRVENDAQVDETF 104

Query: 197 ERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF 232
             ++  GV   ++P   +        DPD + + ++
Sbjct: 105 AGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVY 140

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 49.9 bits (119), Expect = 4e-08
 Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 33/143 (23%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             F ++D +        V     +        +FSL    +                   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL----------------- 48

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               I +    G +     + Y++            I   D  +  ER  +LG++     
Sbjct: 49  -IGDIWVAIMQGEKLAE--RSYNH--------IAFKIDDADFDRYAERVGKLGLDMRPPR 97

Query: 211 --DGGKLKGVAFIKDPDDYWIEI 231
               G+ + + F  D D++  E+
Sbjct: 98  PRVEGEGRSIYF-YDDDNHMFEL 119

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 49.0 bits (117), Expect = 8e-08
 Identities = 25/147 (17%), Positives = 36/147 (24%), Gaps = 49/147 (33%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKR------LDFPEMKFSLYFLGYEDTASAPADPVDR 144
               + D   S+ FY  +LG  L  R      L+   +   L     E     PA     
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR---EPQYGGPAAD--- 61

Query: 145 TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 204
                        TH                          GI   D  +   +    GV
Sbjct: 62  ------------YTHY-----------------------AFGIAAADFARFAAQLRAHGV 86

Query: 205 EFAKKPDGGKLKGVAFIKDPDDYWIEI 231
              K+          +  DPD + +E 
Sbjct: 87  REWKQNRSEG-DSF-YFLDPDGHRLEA 111

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 30/199 (15%), Positives = 46/199 (23%), Gaps = 46/199 (23%)

Query: 75  LHTARDEATNGYFMQQTM------FRIKDPKVSLDFYSRVLGMSLLKR------------ 116
            H       N YF               +    L FY+ +LG   +              
Sbjct: 8   HHHHHSSGENLYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADAFTIQLGVS 67

Query: 117 -LDF---PEMKFSLYFLGY----EDTASAPADPVDRTVWTFGKPATIELTHNWGTES--- 165
            + F    +     Y +             A                     +   S   
Sbjct: 68  QIQFRAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYV 127

Query: 166 -DPD-----FKGYHN---------GNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
            DP                        +    G I IT  DV +A  R ++       K 
Sbjct: 128 EDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAE--LPVKL 185

Query: 211 DGGKLKGVAFIKDPDDYWI 229
           D  +  G+ FI D D + +
Sbjct: 186 DQIEPAGLNFIGDQDLFLL 204

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 37/146 (25%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               +KD   +  F   +     +      +  FSL    +   A               
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYS--SGDKTFSLSKEKFFLIAG-------------- 51

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEF-- 206
               I +                  + + R + HI   +  ++V +  ER + LGVE   
Sbjct: 52  --LWICIMEGD--------------SLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKP 95

Query: 207 AKKPDGGKLKGVAFIKDPDDYWIEIF 232
            +    G+ + + +  D D++  E+ 
Sbjct: 96  ERPRVQGEGRSI-YFYDFDNHLFELH 120

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 19/155 (12%), Positives = 37/155 (23%), Gaps = 47/155 (30%)

Query: 88  MQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYEDTASAPADPVDR 144
           M      I   +          +L        D F +     + L        P +    
Sbjct: 4   MNLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQS 63

Query: 145 TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 204
            +                                      I I V+DV +  +R   LG+
Sbjct: 64  GII-------------------------------------IHIEVEDVDQNYKRLNELGI 86

Query: 205 EFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK 235
           +    P     G +      ++ P    ++ + +K
Sbjct: 87  KVLHGPTVTDWGTE---SLLVQGPAGLVLDFYRMK 118

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 37/161 (22%)

Query: 84  NGYFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 133
           N YF    M+ IK          +   +  FY  VLG+  +K     +     Y L Y D
Sbjct: 17  NLYFQSNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSM-YHLFYGD 75

Query: 134 TASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD-- 191
              +P      T  +F                  +                IG+ V    
Sbjct: 76  KTGSPG-----TELSFF-----------------EIPLVGRTYRGTNAITRIGLLVPSED 113

Query: 192 -VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI 231
            ++   ERFE+  V+ ++         + F +D +   + +
Sbjct: 114 SLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLRLVL 153

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 38/153 (24%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
              +D   + DFY   LG  L +R      + +L F G +                    
Sbjct: 15  IPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGDQLVC----------------- 54

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
                 H              +       FG             +  ++ G+ F      
Sbjct: 55  ------HLSDRWDREVSMYPRH-------FGITFRDKKHFDNLYKLAKQRGIPFYHDLSR 101

Query: 211 ---DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
                 +     F+ DP +  +E         +
Sbjct: 102 RFEGLIEEHETFFLIDPSNNLLEFKYYFDDRMM 134

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 47.2 bits (112), Expect = 4e-07
 Identities = 22/147 (14%), Positives = 33/147 (22%), Gaps = 43/147 (29%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLD---FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
           +D      FY +V G   ++ +    F  +      +G                  F   
Sbjct: 17  RDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIG------------------FNAH 58

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKK 209
              EL          +  G             +   VD    V K        G    K 
Sbjct: 59  EAYEL---MQLAQFSETSG---------IKFLLNFDVDTKEAVDKLVPVAIAAGATLIKA 106

Query: 210 P----DGGKLKGVAFIKDPDDYWIEIF 232
           P            A + DP+     I 
Sbjct: 107 PYETYYHWY---QAVLLDPERNVFRIN 130

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 44/146 (30%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 +P  +  FY  +LGM +     +                          + T  
Sbjct: 11  ANIATPEPARAQAFYGDILGMPVAMDHGW--------------------------IVTHA 44

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-- 208
            P       ++  E                    + I VD+  +   R  + G+      
Sbjct: 45  SPLEAHAQVSFAREGGSG-----------TDVPDLSIEVDNFDEVHARILKAGLPIEYGP 93

Query: 209 --KPDGGKLKGVAFIKDPDDYWIEIF 232
             +  G +     F++DP    I I 
Sbjct: 94  VTEAWGVQ---RLFLRDPFGKLINIL 116

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 21/146 (14%), Positives = 36/146 (24%), Gaps = 35/146 (23%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 DP  ++D+  RV G  LL R            L                     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTGG----------------- 47

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF---- 206
               + +       +     G             + + V DV +   R    G +     
Sbjct: 48  --GIVMVRRTGEPYTVSCAGG--------HTCKQVIVWVSDVDEHFMRSTAAGADIVQPL 97

Query: 207 AKKPDGGKLKGVAFIKDPDDYWIEIF 232
             KP G +      ++D + +  E  
Sbjct: 98  QDKPWGLR---QYLVRDLEGHLWEFT 120

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 21/157 (13%), Positives = 49/157 (31%), Gaps = 34/157 (21%)

Query: 82  ATNGYFMQQT--MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 139
           +  GY +++   ++  KD   ++ ++  +LG             +S   +  +D      
Sbjct: 14  SERGYVVRENGPVYFTKDMDKTVKWFEEILG-------------WSGDIVARDDEGFG-- 58

Query: 140 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 199
                    F  P+ + + H         F+G+H    EP       + ++ +    +  
Sbjct: 59  ----DYGCVFDYPSEVAVAHL------TPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYV 108

Query: 200 ERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIF 232
           +  G +          G +      I   D   +  F
Sbjct: 109 KENGWDQISDIYTQPWGAR---ECSITTTDGCILRFF 142

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.1 bits (106), Expect = 3e-06
 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 36/146 (24%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
             +F +K+P  S +FY  +L    ++                              ++  
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPIESSP------------------------TFAMFVM 44

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEF 206
                + L      E      G         G   +   V   + V +   ++    +  
Sbjct: 45  KTGLRLGLWAQEEIEPKAHQTG---------GGMELSFQVNSNEMVDEIHRQWSDKEISI 95

Query: 207 AKKPDGGKLKGVAFIKDPDDYWIEIF 232
            + P            DPD++ + IF
Sbjct: 96  IQPPTQMDFGYTFVGVDPDEHRLRIF 121

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 43.9 bits (103), Expect = 7e-06
 Identities = 22/138 (15%), Positives = 36/138 (26%), Gaps = 28/138 (20%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 155
            D + S  FY    G + + R      +   Y +     A+                   
Sbjct: 14  GDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQ--------------- 54

Query: 156 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL 215
            L  + G                     H      +V    ER    G +  +  D    
Sbjct: 55  NLQEDVGVAVTSRPGSMA--------LAHNVRAETEVAPLMERLVAAGGQLLRPADAPPH 106

Query: 216 KGV-AFIKDPDDYWIEIF 232
            G+  ++ DPD +  EI 
Sbjct: 107 GGLRGYVADPDGHIWEIA 124

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 29/152 (19%), Positives = 43/152 (28%), Gaps = 41/152 (26%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
                ++D   SL+FY R LG+ +                        PA+         
Sbjct: 7   LFAVVVEDMAKSLEFY-RKLGVEI------------------------PAEADSAPHTEA 41

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV-----DDVYKACERFERLGV 204
                I L  +    +    + Y      P G     I         V K        G 
Sbjct: 42  VLDGGIRLAWD----TVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGY 97

Query: 205 EFAKKP----DGGKLKGVAFIKDPDDYWIEIF 232
           E   KP     G +    A +KDPD   +++F
Sbjct: 98  EGHLKPWNAVWGQR---YAIVKDPDGNVVDLF 126

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 33/144 (22%)

Query: 94  RIKDPKVSLDFYSRVLGMSLLK---RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
            +  P+ + DFY+ VLG+ L+K     D P      Y L + +                G
Sbjct: 15  IVGHPQENTDFYAGVLGLRLVKQTVNFDDPGT----YHLYFGNEG--------------G 56

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAK 208
           KP TI     W         G   G       G     V    +    +R E+  V + K
Sbjct: 57  KPGTIITFFPW--------AGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK 108

Query: 209 KPDGGKLKGVAFIKDPDDYWIEIF 232
               G+ + V F  DP    +EI 
Sbjct: 109 IERFGE-QYVEF-DDPHGLHLEIV 130

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 41.0 bits (96), Expect = 7e-05
 Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 40/143 (27%)

Query: 96  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 155
            D   +  FY    G ++    + P+M +S+   G    +  P +P              
Sbjct: 34  DDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPG------------- 77

Query: 156 ELTHNWGTESDPDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKP--- 210
                            + G  +        + + V+ +  A ER E LG +        
Sbjct: 78  ---------------YINGGMMQRGEVTTPVVTVDVESIESALERIESLGGKTVTGRTPV 122

Query: 211 -DGGKLKGVAFIKDPDDYWIEIF 232
            + G     A+  D +   + ++
Sbjct: 123 GNMGF---AAYFTDSEGNVVGLW 142

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 21/149 (14%), Positives = 36/149 (24%), Gaps = 41/149 (27%)

Query: 90  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 149
             +  + + + S DFY  +     +                                  F
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVTP--------------------------RYVAF 49

Query: 150 GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT------VDDVYKACERFERLG 203
                       G E            +E   F  IGI       VD ++    + +   
Sbjct: 50  PSSGDALFAIWSGGEEPV---------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQ 100

Query: 204 VEFAKKPDGGKLKGVAFIKDPDDYWIEIF 232
           +   K+P          I DPD + I + 
Sbjct: 101 IIVIKEPYTDVFGRTFLISDPDGHIIRVC 129

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.94
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.91
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.89
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.88
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.87
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.86
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.85
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.83
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.82
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.82
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.81
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.8
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.79
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.79
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.79
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.78
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.78
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.77
2i7r_A	118	Conserved domain protein; structural genomics cons	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.77
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.76
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.76
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.76
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.76
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.76
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.76
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.75
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.75
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.75
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.75
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.75
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.75
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.75
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.74
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.74
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.74
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.73
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.73
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.73
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.72
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.72
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.72
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.71
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.7
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.69
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.69
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.69
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.68
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.67
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.67
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.67
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.67
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.66
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.63
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.63
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.62
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.62
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.62
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.62
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.6
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.6
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.6
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.58
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.58
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.57
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.56
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.56
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.52
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.5
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.49
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.48
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.44
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.43
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.41
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.4
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.32
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.31
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.27
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.26
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.26
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.25
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.21
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.19
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.12
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.1
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.02
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.24
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.63
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.33
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.71
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.41
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	93.63
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	93.41
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	93.25
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	92.9
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	92.15
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	91.92
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	91.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	91.66
3ghj_A	141	Putative integron gene cassette protein; integron	90.07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	89.92
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	89.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	89.27
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	88.83
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	88.23
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	88.1
2p25_A	126	Glyoxalase family protein; structural genomics, MC	88.09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	86.92
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	86.41
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	85.47
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	84.66
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	84.4
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	83.96
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	83.88
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	83.45
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	83.38
3huh_A	152	Virulence protein STM3117; structural genomics, ny	83.28
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	82.89
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	82.82
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	80.66

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.94  E-value=4.6e-27  Score=190.85  Aligned_cols=166  Identities=58%  Similarity=1.116  Sum_probs=130.3

Q ss_pred             CCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCc
Q 026024           74 GLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (244)
Q Consensus        74 ~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
                      +....+.+.+..++++|++|.|+|++++++||+++|||++..+...+++.+.+++++.++....+.+......|.+.++.
T Consensus        21 ~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  100 (187)
T 3vw9_A           21 SCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKA  100 (187)
T ss_dssp             HTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSS
T ss_pred             hhccCCCCccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCc
Confidence            44455667788999999999999999999999999999999887766777888999876543334444445667777778


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       154 ~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      .|+|+..++....+. .++..++..+.|++||+|.|+|+++++++|+++|+++...+..+.+++++||+|||||.|||++
T Consensus       101 ~l~l~~~~~~~~~~~-~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  179 (187)
T 3vw9_A          101 TLELTHNWGTEDDET-QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN  179 (187)
T ss_dssp             EEEEEEETTGGGCTT-CCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEEC
T ss_pred             eEEEEEecCCCCCCc-cccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEE
Confidence            999976654432221 1244454455689999999999999999999999999998876666667899999999999999


Q ss_pred             cCCCCCC
Q 026024          234 LKTIGKI  240 (244)
Q Consensus       234 ~~~~~~~  240 (244)
                      ...+.++
T Consensus       180 ~~~~~~~  186 (187)
T 3vw9_A          180 PNKMATL  186 (187)
T ss_dssp             GGGSGGG
T ss_pred             ccccccC
Confidence            8877654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.91  E-value=1.4e-23  Score=170.06  Aligned_cols=164  Identities=63%  Similarity=1.164  Sum_probs=113.5

Q ss_pred             CCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCc
Q 026024           74 GLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (244)
Q Consensus        74 ~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
                      +....+.+.+..++++|+.|.|+|++++++||+++|||++..+...++..+..++++.++...++.+...+..|.+..+.
T Consensus        18 ~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (184)
T 2za0_A           18 SCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKA   97 (184)
T ss_dssp             HTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSS
T ss_pred             cccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCc
Confidence            34445555677899999999999999999999999999998765444445666777653211111111112233333467


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       154 ~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      .|+|+.....+..+.. ++..++..+.|+.|++|.|+|+++++++|+++|+++..++..+.+++.+||+|||||.|||++
T Consensus        98 ~l~L~~~~~~~~~~~~-~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~  176 (184)
T 2za0_A           98 TLELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN  176 (184)
T ss_dssp             EEEEEEETTGGGCTTC-CCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEEC
T ss_pred             eEEEEecCCCCCCccc-ccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEe
Confidence            8888765432211111 122222223477899999999999999999999999988866555567899999999999999


Q ss_pred             cCCCC
Q 026024          234 LKTIG  238 (244)
Q Consensus       234 ~~~~~  238 (244)
                      ...+.
T Consensus       177 ~~~~~  181 (184)
T 2za0_A          177 PNKIA  181 (184)
T ss_dssp             TTTGG
T ss_pred             cCccc
Confidence            87654

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.89  E-value=1.5e-23  Score=165.69  Aligned_cols=132  Identities=17%  Similarity=0.246  Sum_probs=89.9

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...|+|+|+.|.|+|+++|++||+++|||++..+...++..+  ..+...+..               ....+.+ ....
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~--~~~~~~~~~---------------~~~~l~~-~~~~   83 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRW--LTVVSPEAP---------------DGTQLLL-EPSS   83 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEE--EEEECTTCT---------------TSCEEEE-EECC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceE--EEEeccCCC---------------cceEEEe-ccCC
Confidence            356899999999999999999999999999987765444333  333221110               0222222 2111


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .....   +...+ ....|..|++|.|+|+++++++|+++|+++..+|.+.++++.+||+|||||+|||+|...
T Consensus        84 ~~~~~---~~~~~-~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           84 HAAVT---PFKEA-LVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             STTHH---HHHHH-HHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC--
T ss_pred             Ccccc---ccccc-cccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEECC
Confidence            11000   00000 001266799999999999999999999999988876666788999999999999999643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.88  E-value=3.9e-21  Score=146.63  Aligned_cols=126  Identities=40%  Similarity=0.738  Sum_probs=94.2

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|+.|.|+|++++++||+++|||++......+++.+..+++..++..               .+..|+|...+....
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~   65 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCC---------------CCcEEEEEEcCCCCc
Confidence            67999999999999999999999999998776544555666677654310               146788875433221


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc--eEEEEECCCCCEEEEEecCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK--GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~--~~~~~~DPdG~~IEi~e~~~  236 (244)
                            ...+    .+..|++|.|+|+++++++|+++|+++..++.....+  ..+|++|||||.|||++...
T Consensus        66 ------~~~~----~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           66 ------YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             ------CCCC----SSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             ------ccCC----CCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence                  1111    3778999999999999999999999998766433222  46889999999999999754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.87  E-value=1.7e-21  Score=147.08  Aligned_cols=122  Identities=22%  Similarity=0.321  Sum_probs=92.3

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      +|+++|+.|.|+|++++++||+++|||++..+...++..+..+++..++                  +..|+|.......
T Consensus         1 gm~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~l~~~~~~~   62 (127)
T 3e5d_A            1 GMKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED------------------GARLEIMSRTDVT   62 (127)
T ss_dssp             -CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS------------------SCEEEEEEETTCC
T ss_pred             CCEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC------------------CcEEEEEecCCCC
Confidence            5889999999999999999999999999987654344445566666432                  4678887654322


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                      ..+    ..    ...|..|++|.|+|   +++++++++++|+++...|.....+ +.+|++|||||.|||+
T Consensus        63 ~~~----~~----~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           63 GKT----TG----ENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CCC----CS----SCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCC----Cc----CCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            111    11    12377899999999   8899999999999998876443333 5789999999999996

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.86  E-value=1.3e-20  Score=142.72  Aligned_cols=130  Identities=21%  Similarity=0.224  Sum_probs=91.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++++||+++|||++..+...++......++..+                   +..++|+.+...+
T Consensus         3 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~   63 (134)
T 3l7t_A            3 LKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-------------------DIELEIFGNKLTD   63 (134)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-------------------TEEEEEEECCTTS
T ss_pred             eeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-------------------CeEEEEEeccccc
Confidence            368999999999999999999999999998876544443334445432                   4578887632111


Q ss_pred             CCCCCCCCCCCCC-CCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEe
Q 026024          165 SDPDFKGYHNGNS-EPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       165 ~~~~~~~~~~g~~-~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e  233 (244)
                      ......+.....+ ...|..|++|.|+|+++++++|+++|+++...+..... .+.+|++|||||.|||+|
T Consensus        64 ~~~~~~~~~~~~~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           64 SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             TTCCCCCCCCCSSSCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             ccccCCccccCCCCCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            0000000000001 22478899999999999999999999998776644332 357899999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.85  E-value=7.9e-21  Score=145.05  Aligned_cols=127  Identities=20%  Similarity=0.208  Sum_probs=91.2

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEee-eCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ++.++++|++|.|+|++++++||+ +|||++..+. ..+.......++..+                   +..|+|+...
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~   62 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-------------------GYRVELVAPD   62 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-------------------TEEEEEEEES
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-------------------CEEEEEEecC
Confidence            456899999999999999999999 9999987652 223333445555532                   5678887653


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC--CCCCc-ceEEEEECCCCCEEEEEec
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP--DGGKL-KGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p--~~g~~-~~~~~~~DPdG~~IEi~e~  234 (244)
                      .... + ...+.. .  ..|++||+|.|+|+++++++|+++|+++..+|  ..+.. .+.+|++|||||+|||+|+
T Consensus        63 ~~~~-~-~~~~~~-~--~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           63 GEDS-P-INKTIK-K--GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             STTC-T-HHHHTT-T--SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CCCC-h-HHHHHh-c--CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            3221 0 000000 0  23888999999999999999999999988754  22222 3578999999999999984

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.84  E-value=4.2e-20  Score=144.01  Aligned_cols=129  Identities=18%  Similarity=0.145  Sum_probs=91.6

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--------CCcEEEEEeecCCCCCCCCCCccceeeecCCCcE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  154 (244)
                      ....+++|+.|.|+|++++++||+++|||++......+        .+.+  .++..++                  +..
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------~~~   74 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD------------------GTI   74 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT------------------SCE
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC------------------CCE
Confidence            45678999999999999999999999999998632211        1122  3333221                  467


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       155 leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                      |+|+......... .  .  ......+..|++|.|+  |+++++++|+++|+++...+.....+..+||+|||||.|||+
T Consensus        75 l~l~~~~~~~~~~-~--~--~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~  149 (156)
T 3kol_A           75 LDLFGEPELSPPD-P--N--PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIR  149 (156)
T ss_dssp             EEEEECTTCCCSS-S--S--TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEE
T ss_pred             EEEEecCCCCcCC-C--C--CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEE
Confidence            8887643321100 0  0  0111247789999999  999999999999999987664444456899999999999999


Q ss_pred             ecCC
Q 026024          233 DLKT  236 (244)
Q Consensus       233 e~~~  236 (244)
                      +...
T Consensus       150 ~~~~  153 (156)
T 3kol_A          150 CDPE  153 (156)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            8753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=2e-19  Score=139.63  Aligned_cols=123  Identities=37%  Similarity=0.643  Sum_probs=91.7

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++..+...+++.+..+++..++..               .+..|+|.......
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~   70 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVT   70 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCC
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCC---------------CceEEEEEecCCCC
Confidence            468999999999999999999999999998765434444555666654210               03678887653321


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .      +..    ..+..|++|.|+|+++++++|+++|+++..+  .+ ...++||+|||||.|||++..
T Consensus        71 ~------~~~----~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~--~g-~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           71 S------YKH----DEAYGHIAIGVEDVKELVADMRKHDVPIDYE--DE-SGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             C------CCC----CSSEEEEEEEESCHHHHHHHHHHTTCCEEEE--CS-SSSEEEEECTTSCEEEEEEHH
T ss_pred             C------CCC----CCCceEEEEEeCCHHHHHHHHHHCCCEEecc--CC-cEEEEEEECCCCCEEEEEEcC
Confidence            1      111    1377899999999999999999999998876  22 223459999999999999863

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.84  E-value=1.4e-19  Score=137.31  Aligned_cols=124  Identities=18%  Similarity=0.262  Sum_probs=90.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++++|+.|.|+|++++++||+++|||++..+...+++ ...+.+..++                 ....|++.....
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~-----------------~~~~l~l~~~~~   70 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG-----------------AQTQVALGLPSW   70 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT-----------------CSCEEEEECGGG
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC-----------------CceEEEEecCcc
Confidence            3467999999999999999999999999999887543222 2233343221                 145677764321


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      ...          ...+.+..|++|.|+|+++++++|+++|+++..++....++ +.+|++|||||.|||+|.
T Consensus        71 ~~~----------~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           71 YED----------GRKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             CSS----------CCCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             ccc----------ccCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            100          01123678999999999999999999999998777544444 689999999999999973

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.83  E-value=6.2e-20  Score=137.90  Aligned_cols=121  Identities=19%  Similarity=0.304  Sum_probs=85.9

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+++|+.|.|+|++++++||+++|||++..+...++ ..+. .++..+                   ...++|.......
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~-------------------~~~l~l~~~~~~~   63 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLG-------------------SQELEIFISDQFP   63 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEET-------------------TEEEEEEECTTCC
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecC-------------------CeEEEEEeccCCC
Confidence            568999999999999999999999999886542222 2222 223322                   2377886543222


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEe
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e  233 (244)
                      ..+.   .    ....|..|++|.|+|+++++++|+++|+++...+..... ...+|++|||||.|||+|
T Consensus        64 ~~~~---~----~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           64 ARPS---Y----PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CCCC---S----SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             CCCC---C----CCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            1110   1    112367899999999999999999999998766543333 357899999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.83  E-value=4.8e-20  Score=145.49  Aligned_cols=131  Identities=20%  Similarity=0.251  Sum_probs=92.9

Q ss_pred             CCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC--------------CcEEEEEeecCCCCCCCCCCccce
Q 026024           80 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRT  145 (244)
Q Consensus        80 ~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~  145 (244)
                      .+.+...+++|++|.|+|++++++||+++|||++..+...+.              ....+.++..              
T Consensus        12 ~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------   77 (159)
T 3gm5_A           12 KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL--------------   77 (159)
T ss_dssp             SSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE--------------
T ss_pred             ccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec--------------
Confidence            344677899999999999999999999999999876543321              2233344432              


Q ss_pred             eeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCC
Q 026024          146 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPD  225 (244)
Q Consensus       146 ~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPd  225 (244)
                           +...|+|++...... + ...+...  ...|++||+|.|+|+++++++|+++|+++...+... ..+++|++|||
T Consensus        78 -----g~~~leL~~~~~~~~-~-~~~~l~~--~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~-g~~~~~~~dpd  147 (159)
T 3gm5_A           78 -----GPLQLELIEPDENPS-T-WREFLDK--NGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFE-GGRYAYIDTLR  147 (159)
T ss_dssp             -----TTEEEEEEEECSSSC-H-HHHHHHH--HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEET-TEEEEEESCHH
T ss_pred             -----CCEEEEEEEECCCCC-h-hHHHhhc--CCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccC-CeeEEEEeccc
Confidence                 357888876532211 0 0000000  013889999999999999999999999997665322 34689999999


Q ss_pred             --CCEEEEEec
Q 026024          226 --DYWIEIFDL  234 (244)
Q Consensus       226 --G~~IEi~e~  234 (244)
                        |++|||+|+
T Consensus       148 ~~G~~iEl~e~  158 (159)
T 3gm5_A          148 ALKVMIELLEN  158 (159)
T ss_dssp             HHSSEEEEEEE
T ss_pred             cCcEEEEEEec
Confidence              999999996

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=1.5e-19  Score=136.86  Aligned_cols=128  Identities=23%  Similarity=0.373  Sum_probs=90.3

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|++|.|+|++++++||+++|||++..+...++.....+++..+                   +..++|+......
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   63 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-------------------NTKMELLHPLGLD   63 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-------------------SSEEEEEEECSTT
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-------------------CEEEEEEecCCCC
Confidence            468999999999999999999999999998765444334455666543                   4678887654322


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC-CCCCcc-eEEEE--ECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLK-GVAFI--KDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p-~~g~~~-~~~~~--~DPdG~~IEi~e~  234 (244)
                      . + ...+... ....|..||+|.|+|+++++++|+++|+++..++ ..+..+ ..+|+  +|||||.|||+|.
T Consensus        64 ~-~-~~~~~~~-~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           64 S-P-IAGFLQK-NKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             C-T-THHHHHH-CTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             c-h-hhhhhhc-cCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            1 0 0000000 0123789999999999999999999999987653 223322 35566  8999999999983

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.82  E-value=2.3e-19  Score=137.80  Aligned_cols=124  Identities=18%  Similarity=0.213  Sum_probs=91.0

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++..+...+++.+..+++. +                   +..|+|.......
T Consensus         3 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~-------------------~~~l~l~~~~~~~   62 (136)
T 2rk0_A            3 LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G-------------------GLSIVLREHDGGG   62 (136)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T-------------------SCEEEEEEETTCS
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C-------------------CCEEEEEeCCCCc
Confidence            3679999999999999999999999999987755333344445554 1                   4678887643221


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      . +.   +.   ....|..|++|.|   +|+++++++|+++|+++.. +.....++.+||+|||||.|||++...
T Consensus        63 ~-~~---~~---~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           63 T-DL---FD---ETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             S-SC---CC---TTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             c-cC---CC---CCCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCceEEEEECCCCCEEEEEEcCC
Confidence            1 11   11   1123778999999   8999999999999999764 322334467899999999999998643

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.82  E-value=2.3e-19  Score=142.43  Aligned_cols=130  Identities=24%  Similarity=0.342  Sum_probs=93.9

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|++|.|+|++++++||+++|||++..+...++......++..+                   +..|+|+......
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~~   66 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-------------------ESKIELLEPLSEE   66 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEEESSTT
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-------------------CeEEEEEeECCCC
Confidence            468999999999999999999999999998765544444556666542                   4678887643221


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEec-CCCCCcc-eEEEE--ECCCCCEEEEEecCCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFDLKTI  237 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~-p~~g~~~-~~~~~--~DPdG~~IEi~e~~~~  237 (244)
                      . + ...+...  ...|+.||+|.|+|+++++++|+++|+++..+ +..+..+ .++|+  +|||||+|||++....
T Consensus        67 ~-~-~~~~~~~--~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           67 S-P-IAKFIQK--RGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             S-H-HHHHHHH--HCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             C-h-HHHHhhc--CCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence            1 0 0000000  01378999999999999999999999998776 5444333 46677  4999999999997653

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.82  E-value=6.3e-19  Score=133.73  Aligned_cols=121  Identities=20%  Similarity=0.271  Sum_probs=86.6

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ...+++|+.|.|+|++++++||+++|||++....   + .+  .++..+                   +..++|......
T Consensus         7 ~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~-------------------~~~~~l~~~~~~   61 (133)
T 3ey7_A            7 KISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG-------------------HQKINLHQLGNE   61 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTSC
T ss_pred             EecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC-------------------CEEEEEEcCCCC
Confidence            3468999999999999999999999999998762   1 22  223322                   456676543222


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCC-HHHHHHHHHHCCCeEEecCCC--CC--cceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDG--GK--LKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdD-vd~~~~rl~~~Gv~v~~~p~~--g~--~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .. +    ..  .....|..|++|.|+| +++++++|+++|+++...+..  +.  ..+.+|++|||||.|||++...
T Consensus        62 ~~-~----~~--~~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           62 FE-P----KA--QNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             CS-S----CC--TTCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             cc-c----cC--CCCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            11 0    00  1112367899999997 999999999999998876532  11  1257899999999999999753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=6.1e-19  Score=137.15  Aligned_cols=132  Identities=14%  Similarity=0.216  Sum_probs=91.6

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeC-----------CCCcEEEEEeecCCCCCCCCCCccceeeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP  152 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  152 (244)
                      ..++++|+.|.|+|++++++||++ |||++......           ++.....+++..++                 ++
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------g~   69 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GH   69 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SS
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC-----------------CC
Confidence            457899999999999999999999 99999865432           11233445555422                 13


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEE
Q 026024          153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEI  231 (244)
Q Consensus       153 ~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi  231 (244)
                      ..|+|+..........   .........|++||+|.|+|+++++++|+++|+++..++.. +...+.+||+|||||.|||
T Consensus        70 ~~l~l~~~~~~~~~~~---~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel  146 (153)
T 1ss4_A           70 SRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGL  146 (153)
T ss_dssp             CEEEEEEEEESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEE
T ss_pred             cEEEEEEecCCCCccc---ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEE
Confidence            6788765322211000   00001112477899999999999999999999999876633 2223578999999999999


Q ss_pred             EecCC
Q 026024          232 FDLKT  236 (244)
Q Consensus       232 ~e~~~  236 (244)
                      ++...
T Consensus       147 ~~~~~  151 (153)
T 1ss4_A          147 AEELG  151 (153)
T ss_dssp             EEECC
T ss_pred             EeccC
Confidence            99754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.81  E-value=4.3e-19  Score=137.27  Aligned_cols=135  Identities=16%  Similarity=0.270  Sum_probs=92.4

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..++++|+.|.|+|++++++||+++|||++......++.....+++..++...             ..+..|+|+.....
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~~~~l~l~~~~~~   72 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLT-------------EHMTQVQVMAPLND   72 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCC-------------TTCCEEEEEEESST
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCc-------------CcceEEEEeecCCC
Confidence            45789999999999999999999999999987654443344455665432100             00267888764322


Q ss_pred             CCCCCCCCC--CCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEE-ecCCCCCcc-eEEEE--ECCCCCEEEEEecC
Q 026024          164 ESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGKLK-GVAFI--KDPDDYWIEIFDLK  235 (244)
Q Consensus       164 ~~~~~~~~~--~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~-~~p~~g~~~-~~~~~--~DPdG~~IEi~e~~  235 (244)
                      .. + ...+  ..+  ...|+.|++|.|+|+++++++|+++|+++. ..+..+..+ .++|+  +|||||.|||++..
T Consensus        73 ~~-~-~~~~~~~~~--~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           73 ES-T-VAKWLAKHN--GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TS-H-HHHHHHHTT--TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CC-h-HHHHHHhCC--CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            11 0 0000  011  003778999999999999999999999987 345433333 45666  99999999999964

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.80  E-value=1.5e-18  Score=132.90  Aligned_cols=115  Identities=17%  Similarity=0.190  Sum_probs=85.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++....+    .+..  +..++                  +..+.|...... 
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~------------------~~~l~l~~~~~~-   65 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG------------------DALFAIWSGGEE-   65 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST------------------TCEEEEESSSCC-
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC------------------CcEEEEEeCCCC-
Confidence            4689999999999999999999999999876532    2322  22111                  456777543211 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHH---CCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFER---LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~---~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                             ...   ...+..|++|.|+|   +++++++|++   +|+++..+|....+++.+||+|||||.|||++.
T Consensus        66 -------~~~---~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           66 -------PVA---EIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             -------CCT---TSCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             -------CcC---CCCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeC
Confidence                   000   11256799999986   9999999999   999998877554555779999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.79  E-value=2.6e-18  Score=134.35  Aligned_cols=124  Identities=18%  Similarity=0.223  Sum_probs=85.7

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ....+++|+.|.|+|++++++||+++|||++..+.   + .+  .++..+                   +..++|.....
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~~-------------------~~~l~l~~~~~   73 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NR--KALIFG-------------------AQKINLHQQEM   73 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTB
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-Ce--EEEEeC-------------------CeEEEEeccCC
Confidence            34578999999999999999999999999998762   2 22  223322                   35667754322


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC-CHHHHHHHHHHCCCeEEecCCC--CCc--ceEEEEECCCCCEEEEEecCCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GKL--KGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd-Dvd~~~~rl~~~Gv~v~~~p~~--g~~--~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      ... +    .  ......|..|++|.++ |+++++++|+++|+++...|..  +..  .+.+||+|||||.|||++...-
T Consensus        74 ~~~-~----~--~~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           74 EFE-P----K--ASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             CCS-S----C--CSSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             cCC-C----c--CcCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            110 0    0  0111236789999997 9999999999999998776532  111  2578999999999999997654


Q ss_pred             C
Q 026024          238 G  238 (244)
Q Consensus       238 ~  238 (244)
                      .
T Consensus       147 ~  147 (152)
T 3huh_A          147 H  147 (152)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.79  E-value=2.3e-18  Score=130.39  Aligned_cols=116  Identities=13%  Similarity=0.113  Sum_probs=84.6

Q ss_pred             ceEEEEEEEEc--CCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           85 GYFMQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        85 ~~~l~Hv~L~V--~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ..+++|+.|.|  +|++++++||+++|||++..+....... ...++..+                   +..++|.....
T Consensus         8 ~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~-------------------~~~l~l~~~~~   67 (126)
T 2qqz_A            8 IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG-------------------NQEIHIGVEQN   67 (126)
T ss_dssp             EEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET-------------------TEEEEEEECTT
T ss_pred             cceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC-------------------CEEEEEEecCC
Confidence            45799999999  8999999999999999988653211000 01223221                   35677754211


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .              .+.+..|++|.|+|+++++++|+++|+++...+.. ...+.+|++|||||.|||+++.
T Consensus        68 ~--------------~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           68 F--------------NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHAR-PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             C--------------CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECSS-TTEEEEEEECTTSCEEEEEEEC
T ss_pred             C--------------CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCCC-CCeeEEEEECCCCCEEEEEeCC
Confidence            0              01256799999999999999999999998877732 2345789999999999999974

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.79  E-value=2.4e-18  Score=131.72  Aligned_cols=118  Identities=14%  Similarity=0.135  Sum_probs=80.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ...|+|+.|.|+|++++++||++ |||++..... +.+.+.  ++...                  ++..++|.....  
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~~--~~~~~------------------~~~~l~l~~~~~--   59 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSEV--HRAVH------------------NGVEFSLYSIQN--   59 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCE--EEEEE------------------TTEEEEEEECCC--
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCEE--EEEeC------------------CCeEEEEEECCC--
Confidence            46899999999999999999999 9999876521 111222  22200                  145566632211  


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCe-EEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~-v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .      ..    ...+..|++|.|+|+++++++++++|++ +..+|...+++..++|+|||||+|||.+.+.
T Consensus        60 ~------~~----~~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           60 P------QR----SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             C------SS----CCCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC---
T ss_pred             C------cC----CCCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEecc
Confidence            1      10    1124468999999999999999999999 7776655445545899999999999999765

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.78  E-value=1.9e-18  Score=133.28  Aligned_cols=120  Identities=13%  Similarity=0.133  Sum_probs=85.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +...|+.|.|+|++++++||+++|||++..+... ++.+..++++.++.                 ...|++....+...
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~~~   71 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA-----------------DYHLEFTQYEGGST   71 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS-----------------SEEEEEEEETTCCC
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC-----------------ceEEEEeecCCCCC
Confidence            4567899999999999999999999999876432 23355666765331                 34577765432210


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCH---HHHHHHHHHCCCeEEec--CCCCCcceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDv---d~~~~rl~~~Gv~v~~~--p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                            ...+    .+..|++|.|+|+   ++++++|+++|+++...  +..+..+  .||+|||||.|||+++.
T Consensus        72 ------~~~~----~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           72 ------APVP----HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             ------CCCC----CTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             ------CCCC----CCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence                  1111    2668999999999   99999999999998832  2212222  37999999999999864

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.78  E-value=9.3e-19  Score=137.02  Aligned_cols=116  Identities=19%  Similarity=0.232  Sum_probs=84.5

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      ++. +.|.|+|++++++||+++|||++..+...++..+.+.+++                     .  ++++......  
T Consensus         7 ~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---------------------~--~~l~~~~~~~--   60 (144)
T 3r6a_A            7 QIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS---------------------T--ILLIAGSEEA--   60 (144)
T ss_dssp             EEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET---------------------T--EEEEESCHHH--
T ss_pred             EEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec---------------------c--EEEecCCccc--
Confidence            444 8999999999999999999999887654444344333332                     2  4454321110  


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCC
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG  238 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~  238 (244)
                           .     .+.+..|++|.|+|+++++++|+++|+++..++...++++.+||+|||||.|||++.....
T Consensus        61 -----~-----~~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           61 -----L-----KPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             -----H-----GGGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC--
T ss_pred             -----C-----CCCcceEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCcc
Confidence                 0     0124479999999999999999999999988775444457789999999999999987643

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.77  E-value=3.3e-18  Score=128.06  Aligned_cols=113  Identities=16%  Similarity=0.203  Sum_probs=80.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|+.|.|+|++++++||+++|||++....+    .+  .++..+                   +..+.+... ... 
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~-~~~-   56 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQN-HLV-   56 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESS-CSS-
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeC-------------------CeEEEEEcC-CCC-
Confidence            789999999999999999999999999875421    22  223322                   234444211 100 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                       +    ..   ..+.+ .|++|.|+|+++++++|+++|+++..++...+++ +.+|++|||||.|||++.
T Consensus        57 -~----~~---~~~~~-~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           57 -P----LE---NFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             -S----CC---CCCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             -C----cc---cCCCe-EEEEEEECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence             0    00   01124 4899999999999999999999987776543333 678999999999999985

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=5.6e-18  Score=131.54  Aligned_cols=112  Identities=13%  Similarity=0.186  Sum_probs=83.4

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++++||+++|||++..+..  +..+..+.++  +                 .+..|+|...... 
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~-----------------~~~~l~l~~~~~~-   83 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G-----------------RAGMVVLQEEKEN-   83 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T-----------------TTEEEEEEECCSS-
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C-----------------CCcEEEEeccCCC-
Confidence            4568999999999999999999999999988753  2233222222  1                 1467777653110 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCCCCEEEEEe
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e  233 (244)
                                     .+..|++|.|+  |+++++++|+++|+++..+..... ..+.+||+|||||.|||++
T Consensus        84 ---------------~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           84 ---------------WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             ---------------CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             ---------------CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence                           14579999997  999999999999999884433222 2357899999999999986

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.77  E-value=1e-17  Score=126.94  Aligned_cols=111  Identities=9%  Similarity=0.040  Sum_probs=83.6

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +...|+.|.|+|++++++||+++|||++..+.    ..+  .++..+                   +..+.|....... 
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~-------------------~~~l~l~~~~~~~-   57 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD-------------------DVTLFISAVQDQV-   57 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET-------------------TEEEEEEECSCTT-
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC-------------------CEEEEEEcCCCCC-
Confidence            56789999999999999999999999998751    223  223321                   4566775432110 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHC------CC--eEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~------Gv--~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                   ..+..|++|.|+|+++++++++++      |+  ++..++...++++.+|++|||||.|||.+..
T Consensus        58 -------------~~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           58 -------------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             -------------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC-
T ss_pred             -------------CCCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEec
Confidence                         013469999999999999999999      99  8887775444457789999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.77  E-value=1.2e-17  Score=127.81  Aligned_cols=120  Identities=18%  Similarity=0.139  Sum_probs=83.9

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      +..++++|+.|.|+|++++++||+++|||++.....    .+  .++...                   +..+.+.....
T Consensus         5 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~-------------------g~~~~l~~~~~   59 (135)
T 3rri_A            5 RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFF-------------------GDQLVCHLSDR   59 (135)
T ss_dssp             CCTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET-------------------TEEEEEEECSC
T ss_pred             cCCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEe-------------------CCEEEEEEcCc
Confidence            456789999999999999999999999999966532    22  222211                   23355533211


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC---C-Cc-ceEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG---G-KL-KGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~---g-~~-~~~~~~~DPdG~~IEi~e~  234 (244)
                      ...     +      ...+..|++|.++   |+++++++|+++|+++..+|..   + .. .+.+||+|||||.|||++.
T Consensus        60 ~~~-----~------~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~  128 (135)
T 3rri_A           60 WDR-----E------VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYY  128 (135)
T ss_dssp             SCS-----S------CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEE
T ss_pred             ccc-----c------CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEE
Confidence            110     0      1125579999995   5999999999999998765532   2 11 2468999999999999997


Q ss_pred             CCCC
Q 026024          235 KTIG  238 (244)
Q Consensus       235 ~~~~  238 (244)
                      .+..
T Consensus       129 ~~~~  132 (135)
T 3rri_A          129 FDDR  132 (135)
T ss_dssp             SSGG
T ss_pred             CChh
Confidence            6544

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.76  E-value=2.4e-18  Score=127.72  Aligned_cols=108  Identities=15%  Similarity=0.220  Sum_probs=80.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|+.|.|+|++++++||+++|||++....   +..+  .++..++                  +..|.+......  
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~------------------~~~l~l~~~~~~--   56 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND------------------GFILTLMKGKEV--   56 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT------------------CCEEEEEECSSC--
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC------------------CcEEEEEeCCCC--
Confidence            67999999999999999999999999988653   2222  3443321                  456777543110  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                           +       ..+..|++|.|   +|+++++++++++|+++.. |.... ++.+|++|||||.|||+
T Consensus        57 -----~-------~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           57 -----Q-------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -----C-------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CEEC--CEEEEEEETTTEEEEEE
T ss_pred             -----C-------CCceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-CcCCC-cEEEEEECCCCcEEEEe
Confidence                 0       02567999999   8999999999999999754 43222 56789999999999996

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.76  E-value=3.2e-18  Score=134.34  Aligned_cols=121  Identities=13%  Similarity=0.138  Sum_probs=81.7

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++...   ++..+.  ++..++.. +     ....+ ........+....    
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~--~~~~~~~~-~-----~l~~~-~~~~~~~~l~~~~----   87 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYS--MVTTGPVG-E-----SGMPD-EPGYINGGMMQRG----   87 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEE--EEECSCBC-T-----TSSBC-SSSCBCEEEEESS----
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEE--EEEeCCcc-e-----eeccc-CCcccccceeecC----
Confidence            4799999999999999999999999998873   223333  23322210 0     00000 0001112332110    


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                              .    +.+. |++|.|+|+++++++|+++|+++..++...+ +++.+||+|||||.|||++..
T Consensus        88 --------~----~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           88 --------E----VTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             --------S----SCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             --------C----CCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence                    0    0244 9999999999999999999999987764333 357789999999999999975

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.76  E-value=1.1e-17  Score=127.46  Aligned_cols=117  Identities=18%  Similarity=0.194  Sum_probs=83.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEE---EEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      .++++|+.|.|+|++++++||+++|||++.....  +..+..   .++..                   ++..++|....
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~-------------------~~~~l~l~~~~   60 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLI-------------------AGLWICIMEGD   60 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEE-------------------TTEEEEEEECS
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEe-------------------CCEEEEEecCC
Confidence            3689999999999999999999999999876432  111100   01211                   14567775421


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEEEEecCC
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..         .     ..+..|++|.|+  |+++++++++++|+++..++... ..++.+|++|||||.|||++...
T Consensus        61 ~~---------~-----~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           61 SL---------Q-----ERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             SC---------C-----CCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSC
T ss_pred             CC---------C-----CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCCh
Confidence            10         0     126689999995  99999999999999998876432 23457899999999999999754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.76  E-value=5.8e-18  Score=132.91  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=83.9

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++....+    .+  .++..++                  +..+.|.......
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~~~~~~------------------g~~l~l~~~~~~~   59 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TF--AMFVMKT------------------GLRLGLWAQEEIE   59 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SE--EEEECTT------------------SCEEEEEEGGGCS
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CE--EEEEcCC------------------CcEEEEecCCcCC
Confidence            3579999999999999999999999999876531    22  2333211                  4567775432211


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .      ..   ....+..|++|.|+|   +++++++|+++|+++..++....+++.+||+|||||.|||++...
T Consensus        60 ~------~~---~~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           60 P------KA---HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             S------CC---C----CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC-
T ss_pred             c------cc---cCCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcCh
Confidence            1      00   011255799999987   999999999999999877755444577899999999999999754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.76  E-value=2e-17  Score=127.06  Aligned_cols=119  Identities=15%  Similarity=0.111  Sum_probs=83.8

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      .+.|.|+|++++++||+++|||++..+...+ +......+..+                   +..|.|.........   
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~-------------------~~~l~l~~~~~~~~~---   61 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG-------------------GGIVMVRRTGEPYTV---   61 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS-------------------SSEEEEEETTCCSSC---
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC-------------------CeEEEEEecCCCcCc---
Confidence            6889999999999999999999998775433 22222333322                   356666543211100   


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecCC
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .  ..+   ..+..|++|.|+|+++++++|+++|+++..++....++ +.+||+|||||.|||++...
T Consensus        62 ~--~~~---~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           62 S--CAG---GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             E--ECC---CCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-
T ss_pred             c--CCC---CCcEEEEEEEeCCHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC
Confidence            0  001   11333999999999999999999999998877544443 67899999999999999743

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.76  E-value=2.9e-17  Score=125.93  Aligned_cols=112  Identities=18%  Similarity=0.209  Sum_probs=84.6

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++++||+++|||++....+  ..    .++..+                   +..|+|.......
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~----~~~~~~-------------------~~~l~l~~~~~~~   56 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--QG----AYLELG-------------------SLWLCLSREPQYG   56 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--TE----EEEEET-------------------TEEEEEEECTTCC
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--Cc----eEEecC-------------------CEEEEEEeCCCCC
Confidence            3679999999999999999999999999987642  21    233322                   3456665431100


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                  ....+..|++|.|+  |+++++++++++|+++..++..  .++.+|++|||||.|||++..
T Consensus        57 ------------~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           57 ------------GPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ------------CCCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS--SSCEEEEECTTCCEEEEESCC
T ss_pred             ------------CCCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC--CeEEEEEECCCCCEEEEEECC
Confidence                        01136689999998  9999999999999999887643  345789999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.75  E-value=3.4e-17  Score=126.53  Aligned_cols=115  Identities=19%  Similarity=0.250  Sum_probs=85.4

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ..+++|+.|.|+|++++++||+++|||++....+  .  .  .++..+                   +..++|.......
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~-------------------~~~l~l~~~~~~~   56 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG-------------------DLWVCLSYDEARQ   56 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC-------------------CEEEEEEECCCCC
Confidence            3579999999999999999999999999987642  2  1  233322                   3456765432111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                        +    ..   ....+..|++|.|+  |+++++++|+++|+++..++..  .++.+|++|||||.|||++..
T Consensus        57 --~----~~---~~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           57 --Y----VP---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             --C----CC---GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEECC
T ss_pred             --C----CC---CCCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC--ceeEEEEECCCCCEEEEEECc
Confidence              0    00   01136689999997  9999999999999999887643  346789999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.75  E-value=5e-18  Score=126.94  Aligned_cols=111  Identities=17%  Similarity=0.235  Sum_probs=79.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .++ |+.|.|+|++++++||+++|||++....   +  +. .++..++.                ....|.+......  
T Consensus         7 ~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~---~--~~-~~~~~~~~----------------~~~~l~l~~~~~~--   61 (119)
T 2pjs_A            7 RRV-VANIATPEPARAQAFYGDILGMPVAMDH---G--WI-VTHASPLE----------------AHAQVSFAREGGS--   61 (119)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC---S--SE-EEEEEEEE----------------EEEEEEEESSSBT--
T ss_pred             eEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC---C--EE-EEEecCCC----------------CcEEEEEEcCCCC--
Confidence            346 9999999999999999999999987641   1  21 12221110                0234555422100  


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                                   ..+..|++|.|+|+++++++++++|+++..++...+++ +.+|++|||||.|||+++
T Consensus        62 -------------~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           62 -------------GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             -------------TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -------------CCceeEEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence                         01446999999999999999999999987766443333 678999999999999985

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.75  E-value=1.1e-17  Score=148.14  Aligned_cols=119  Identities=23%  Similarity=0.363  Sum_probs=92.9

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-----------CCcEEEEEeecCCCCCCCCCCccceeeecCCCc
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
                      .++++|++|.|+|++++++||+++|||++..+...+           ++.+..+++++++..               ...
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~---------------~~~   89 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPED---------------DHF   89 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTT---------------TCC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCC---------------Ccc
Confidence            479999999999999999999999999998776544           456777888765321               156


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       154 ~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      .++|...++...      +..++    |+.||+|.|+|+   +++++++|+++...+     .+.+||+|||||.|||++
T Consensus        90 ~leL~~~~~~~~------~~~~~----g~~hiaf~V~d~---~~~l~~~G~~~~~~~-----~~~~~~~DPdG~~iel~~  151 (330)
T 3zi1_A           90 VAELTYNYGVGD------YKLGN----DFMGITLASSQA---VSNARKLEWPLTEVA-----EGVFETEAPGGYKFYLQN  151 (330)
T ss_dssp             EEEEEEETTCCC------CCBCS----SEEEEEEECHHH---HHHHHHHTCCCEEEE-----TTEEEEECTTSCEEEEES
T ss_pred             EEEEeccCCCCc------cccCC----CeeEEEEECchH---HHHHHHcCCceeccC-----CceEEEECCCCCEEEEEe
Confidence            788877654321      22332    889999999988   677888999988766     236899999999999999


Q ss_pred             cCC
Q 026024          234 LKT  236 (244)
Q Consensus       234 ~~~  236 (244)
                      ...
T Consensus       152 ~~~  154 (330)
T 3zi1_A          152 RSL  154 (330)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            753

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.75  E-value=2e-17  Score=129.05  Aligned_cols=118  Identities=19%  Similarity=0.235  Sum_probs=81.6

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ...+++|+.|.|+|++++++||+++|||++....   + .+.  ++..+                   ...++|......
T Consensus        24 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~~--~l~~g-------------------~~~l~l~~~~~~   78 (147)
T 3zw5_A           24 LIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DRK--ALCFG-------------------DQKFNLHEVGKE   78 (147)
T ss_dssp             SCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TEE--EEEET-------------------TEEEEEEETTSC
T ss_pred             ecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cce--EEEEC-------------------CcEEEEEEcCCC
Confidence            3478999999999999999999999999998542   2 222  22221                   345666543211


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeC-CHHHHHHHHHHCCCeEEecCCC--CCc--ceEEEEECCCCCEEEEEe
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GKL--KGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~Vd-Dvd~~~~rl~~~Gv~v~~~p~~--g~~--~~~~~~~DPdG~~IEi~e  233 (244)
                      .. +.   .  .. ...|..|++|.++ |+++++++|+++|+++...+..  +..  .+.+||+|||||.|||++
T Consensus        79 ~~-~~---~--~~-~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           79 FE-PK---A--AH-PVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             CS-SC---C--SS-CCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             cC-cc---c--CC-CCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            11 10   0  01 1125679999886 9999999999999998755421  111  246899999999999987

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.75  E-value=5.7e-18  Score=134.24  Aligned_cols=128  Identities=19%  Similarity=0.203  Sum_probs=87.9

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ...+++|+.|.|+|++++++||+++|||++.....  + .  ..++..+                   +..+.+......
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~-~--~~~~~~g-------------------~~~~~l~~~~~~   60 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP--G-Q--LVFFKCG-------------------RQMLLLFDPQES   60 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--T-T--EEEEEET-------------------TEEEEEECHHHH
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--C-c--EEEEeCC-------------------CEEEEEEecCCc
Confidence            34679999999999999999999999999987643  1 1  2233321                   345566532211


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      .. +... .........|+.|++|.|   +|+++++++|+++|+++..++.....++.+|++|||||.|||+++..+
T Consensus        61 ~~-~~~~-~~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           61 SR-ADAN-NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             TC-CCTT-CCSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGGGG
T ss_pred             cC-cccc-CCCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCCCC
Confidence            00 0000 000000113668999999   899999999999999987655433345679999999999999997543

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.75  E-value=1.8e-17  Score=127.81  Aligned_cols=114  Identities=18%  Similarity=0.222  Sum_probs=82.3

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEE---EEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      .+++|+.|.|+|++++++||+++|||++..+..  +..+..   .++..                   ++..|+|.....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~-------------------g~~~l~l~~~~~   61 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLI-------------------GDIWVAIMQGEK   61 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEE-------------------TTEEEEEEECCC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEE-------------------CCEEEEEEeCCC
Confidence            579999999999999999999999999886532  111100   01221                   145677754211


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .       +       ..+..|++|.|+  |+++++++++++|+++..++... ..++.+||+|||||.|||++.
T Consensus        62 ~-------~-------~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           62 L-------A-------ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             C-------S-------SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             C-------C-------CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            0       0       126689999999  99999999999999988765432 234578999999999999985

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.75  E-value=4.7e-17  Score=123.44  Aligned_cols=112  Identities=17%  Similarity=0.297  Sum_probs=81.2

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      ..|+.|.|+|++++++||++ |||++..+    +..+  .++..+                   +..|+|.......  +
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~~--~   55 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG-------------------DLMLEFFAHPGLD--P   55 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET-------------------TEEEEEEECTTCC--G
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC-------------------CEEEEEEeCCCCC--C
Confidence            45899999999999999998 99999865    1223  233322                   3567775432110  0


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeE-------EecCCCCCcc-eEEEEECCCCCEEEEEecCCCC
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-------AKKPDGGKLK-GVAFIKDPDDYWIEIFDLKTIG  238 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v-------~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~~~  238 (244)
                                 ..+..|++|.|+|+++++++++++|+++       ..++...+++ +.+|++|||||.|||++.....
T Consensus        56 -----------~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           56 -----------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             -----------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC--
T ss_pred             -----------CCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchhhc
Confidence                       0245799999999999999999999994       5555444443 6789999999999999986643

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.74  E-value=5.8e-17  Score=143.72  Aligned_cols=160  Identities=13%  Similarity=0.126  Sum_probs=106.8

Q ss_pred             cccccccchhhhhhhccCCCCCCC-CCCCCCC----CCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeC
Q 026024           45 TTSWFKASNRFRLLSMASSEPKES-PANNPGL----HTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF  119 (244)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~  119 (244)
                      ..-+++||.++.++-......... +...+..    ...+.......+++|+.|.|+|++++++||+++|||++..... 
T Consensus       106 ~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-  184 (339)
T 3lm4_A          106 KTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-  184 (339)
T ss_dssp             CEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-
T ss_pred             EEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-
Confidence            345689999999884433211100 0000000    0001111256899999999999999999999999999987765 


Q ss_pred             CCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHH
Q 026024          120 PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKAC  196 (244)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~  196 (244)
                      +++.....|+..+..                 ++.+.+......              .+.+++|++|.|+|   +++++
T Consensus       185 ~~g~~~~~~l~~~~~-----------------~~~l~~~~~~~~--------------~~~~~~Hiaf~v~d~~~v~~~~  233 (339)
T 3lm4_A          185 DGNVEIGAWMSSNLL-----------------GHEVACMRDMTG--------------GHGKLHHLAFFYGTGQHNIDAV  233 (339)
T ss_dssp             ETTEEEEEEEESSSS-----------------SCSEEEEECTTS--------------CCSEEEEEEEECCCHHHHHHHH
T ss_pred             cCCcEEEEEEEeCCC-----------------ceEEEEeccCCC--------------CCCceeEEEEEeCCHHHHHHHH
Confidence            334444566665431                 456777542111              11368999999999   88899


Q ss_pred             HHHHHCCCeEEecCCC-CCc-ceEEEEECCCCCEEEEEecCC
Q 026024          197 ERFERLGVEFAKKPDG-GKL-KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       197 ~rl~~~Gv~v~~~p~~-g~~-~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++|+++|+++...|.. +.. ..++|++|||||.|||+....
T Consensus       234 ~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          234 EMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             HHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             HHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            9999999999876642 222 246999999999999986543

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.74  E-value=1.1e-17  Score=130.51  Aligned_cols=116  Identities=20%  Similarity=0.343  Sum_probs=84.9

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  166 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~  166 (244)
                      +++|+.|.|+|++++++||+++|||++..+.  +  .+.  ++..++                  +..|+|........ 
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~~--~~~~~~------------------~~~l~l~~~~~~~~-   79 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TFS--LFVLAN------------------GMKLGLWSRHTVEP-   79 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TEE--EEECTT------------------SCEEEEEETTSCSS-
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--CeE--EEEcCC------------------CcEEEEEeCCCCCC-
Confidence            7899999999999999999999999987654  2  232  222211                  35677754321110 


Q ss_pred             CCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          167 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       167 ~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                           ..   ....+..|++|.|+   |+++++++|+++|+++..++....+++.+||+|||||.|||+++.
T Consensus        80 -----~~---~~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           80 -----KA---SVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             -----CC---CCSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             -----cc---CCCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence                 10   01136689999997   589999999999999887775444457789999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.73  E-value=1.2e-17  Score=130.43  Aligned_cols=126  Identities=12%  Similarity=0.052  Sum_probs=79.0

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ....||.||.|.|+|+++|++||+++ |+........  .... .+....                   ...+.+.....
T Consensus         5 ~~~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~--~~~~-~~~~~~-------------------~~~~~~~~~~~   61 (149)
T 4gym_A            5 ASQSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFTD--ESCA-CMVVSE-------------------QAFVMLIDRAR   61 (149)
T ss_dssp             --CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGCB--TTEE-EEEEET-------------------TEEEEEEEHHH
T ss_pred             CCCccEEEEEEEeCCHHHHHHHHHHh-CCCcceeecC--Ccee-EEeecC-------------------cceEeeecccc
Confidence            44567899999999999999999884 5554443321  2221 222211                   23333322110


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .....   ..........+..|++|.|+   |+++++++++++|+.+..+|.+..+++.+||+|||||+|||+..
T Consensus        62 ~~~~~---~~~~~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           62 FADFT---SKPIADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             HGGGC---SSCBCCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             ccccc---cccCCCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            00000   00000111124469999996   68899999999999999888665556789999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.73  E-value=4e-17  Score=125.65  Aligned_cols=123  Identities=19%  Similarity=0.193  Sum_probs=85.3

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC-
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-  164 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~-  164 (244)
                      ++++|+.|.|+|++++++||++ |||++..+..  ...+..  +..+                  ++..|.|....... 
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~------------------~~~~l~l~~~~~~~~   59 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLD------------------GGIRLAWDTVETVRS   59 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECT------------------TSCEEEEEEHHHHHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcC------------------CCeEEEEecCccchh
Confidence            6899999999999999999998 9999876532  222322  2211                  14567775421100 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..+... .    ....+..|++|.|+   |+++++++|+++|+++..++....++ +.+||+|||||.|||++...
T Consensus        60 ~~~~~~-~----~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           60 YDPEWQ-A----PTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             HCTTCC-C----CBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             hCcccC-C----CCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            000000 0    01136689999999   99999999999999998776543343 57899999999999999764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.73  E-value=3.3e-17  Score=128.11  Aligned_cols=122  Identities=17%  Similarity=0.114  Sum_probs=86.5

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+++|+.|.|+|++++++||+++|||++....    ..+  .++..+                   +..|+|........
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~-------------------~~~l~l~~~~~~~~   58 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN-------------------GFVLATWLVQNLQE   58 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS-------------------SSEEEEEEHHHHHH
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC-------------------CEEEEEEecccccc
Confidence            56899999999999999999999999987653    222  333321                   45677765321000


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEecCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      ...   ....  ...+..|++|.|   +|+++++++|+++|+++..++...++ .+.+||+|||||.|||++...+
T Consensus        59 ~~~---~~~~--~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           59 DVG---VAVT--SRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             HHS---SCCC--SSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTTS
T ss_pred             ccC---CCCC--CCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence            000   0000  012557999999   89999999999999999877654333 3678999999999999997554

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.73  E-value=1e-16  Score=139.79  Aligned_cols=157  Identities=15%  Similarity=0.131  Sum_probs=101.6

Q ss_pred             ccccccchhhhhhhccCCCCCC--CCCCCCCCCCC-CCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-
Q 026024           46 TSWFKASNRFRLLSMASSEPKE--SPANNPGLHTA-RDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-  121 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-  121 (244)
                      .-+++||.++.++-........  .+...|..... ........+++|+.|.|+|++++++||+++|||++......+. 
T Consensus       107 ~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~  186 (309)
T 3hpy_A          107 RVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDG  186 (309)
T ss_dssp             EEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSS
T ss_pred             EEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCC
Confidence            4568999999988433221110  00001100000 0112457899999999999999999999999999987654332 


Q ss_pred             CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHH---HHHHH
Q 026024          122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACER  198 (244)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd---~~~~r  198 (244)
                      +.....|+..++.                 ++.+.+....                .+.+++|++|.|+|++   +++++
T Consensus       187 ~~~~~~~~~~~~~-----------------~~~~~~~~~~----------------~~~~~~Hiaf~v~d~~~v~~~~~~  233 (309)
T 3hpy_A          187 DSDMGIWLSCSHK-----------------VHDIAFVEYP----------------EKGKLHHCSFLLESWEQVLRAGDI  233 (309)
T ss_dssp             CSEEEEEEESSSS-----------------SCSEEEEECS----------------STTEEEEEEEECSSHHHHHHHHHH
T ss_pred             CceEEEEEecCCC-----------------ceeEEEecCC----------------CCCceeEEEEECCCHHHHHHHHHH
Confidence            2344566654321                 3445554321                0126789999998765   46799


Q ss_pred             HHHCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          199 FERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       199 l~~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      |+++|+++...|.. +. ....+|++|||||+|||+...
T Consensus       234 l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          234 MSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             HHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            99999998765532 22 134789999999999998763

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.72  E-value=2.3e-17  Score=124.58  Aligned_cols=107  Identities=11%  Similarity=0.032  Sum_probs=80.1

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      .++.|.|+|++++++||+++|||++....    ..+  .++..+                   +..|.|......   + 
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~-------------------~~~l~l~~~~~~---~-   57 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFGD----RDF--AGVRRG-------------------DIRLHISRTEHQ---I-   57 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET-------------------TEEEEEEECSCH---H-
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeCC----CCE--EEEEEC-------------------CEEEEEEcCCCC---C-
Confidence            47899999999999999999999998651    223  233321                   456777542110   0 


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHC------CC--eEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~------Gv--~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                         .       .+..|++|.|+|+++++++++++      |+  ++..++...++++.+|++|||||.|||+++
T Consensus        58 ---~-------~~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           58 ---V-------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ---H-------HTTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             ---C-------CCceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence               0       12259999999999999999999      99  887777544445678999999999999985

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.72  E-value=1.7e-16  Score=138.07  Aligned_cols=158  Identities=15%  Similarity=0.208  Sum_probs=99.5

Q ss_pred             ccccccchhhhhhhccCCCCCC---CCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC
Q 026024           46 TSWFKASNRFRLLSMASSEPKE---SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM  122 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  122 (244)
                      .-+++||.++.++-........   .+...+............++++|+.|.|+|++++++||+++|||++........+
T Consensus       106 ~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~  185 (307)
T 1mpy_A          106 RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENG  185 (307)
T ss_dssp             EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTC
T ss_pred             EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCC
Confidence            3457999999888443221100   0000010000001123567999999999999999999999999999876542222


Q ss_pred             cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHH
Q 026024          123 KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERF  199 (244)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl  199 (244)
                      .....|+..+..                 +..+++...  ..              +++.+|++|.|+   |+++++++|
T Consensus       186 ~~~~~~l~~~~~-----------------~~~~~~~~~--~~--------------~g~~~hi~f~v~d~~dv~~~~~~l  232 (307)
T 1mpy_A          186 TRVAQFLSLSTK-----------------AHDVAFIHH--PE--------------KGRLHHVSFHLETWEDLLRAADLI  232 (307)
T ss_dssp             CEEEEEEESSSB-----------------SCSEEEEEC--SS--------------SSEEEEEEEECSCHHHHHHHHHHH
T ss_pred             cEEEEEEEcCCC-----------------ceeEEEecC--CC--------------CCcceEEEEEcCCHHHHHHHHHHH
Confidence            112234443221                 234555321  00              113689999999   577788999


Q ss_pred             HHCCCeEEecCCC-C-CcceEEEEECCCCCEEEEEecCC
Q 026024          200 ERLGVEFAKKPDG-G-KLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       200 ~~~Gv~v~~~p~~-g-~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +++|+++...|.. + ..+..+||+|||||.|||++...
T Consensus       233 ~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          233 SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            9999998765532 2 12457899999999999999754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.72  E-value=1.1e-16  Score=138.73  Aligned_cols=153  Identities=18%  Similarity=0.178  Sum_probs=98.6

Q ss_pred             cccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----
Q 026024           47 SWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----  121 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----  121 (244)
                      -+++||.++.++-........ +.......  ..-.+...+++|+.|.|+|++++++||+++|||++......+.     
T Consensus       105 ~~~~DPdG~~iel~~~~~~~~-~~~~~~~~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~  181 (300)
T 2zyq_A          105 IRFADPSGNCLEVFHGTALEH-RRVVSPYG--HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGR  181 (300)
T ss_dssp             EEEECTTCCEEEEEECCCCCC-SCCCCTTC--CCBCCGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTC
T ss_pred             EEEECCCCCEEEEEEcCCcCC-CCCccCCC--cccccCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeeccccccccc
Confidence            358999999888544311110 00000000  0001356789999999999999999999999999875432221     


Q ss_pred             ---C-cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---
Q 026024          122 ---M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---  194 (244)
Q Consensus       122 ---~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---  194 (244)
                         + .....|+..++.                 +..+++...  +              ...|++|++|.|+|+++   
T Consensus       182 ~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~--~--------------~~~g~~h~af~v~d~~~v~~  228 (300)
T 2zyq_A          182 PADGPPAWLRFFGCNPR-----------------HHSLAFLPM--P--------------TSSGIVHLMVEVEQADDVGL  228 (300)
T ss_dssp             CTTSCCEEEEEEESSSB-----------------SCSEEEESS--C--------------CSSSEEEEEEEBSSHHHHHH
T ss_pred             CCCCCceEEEEEEECCC-----------------ccEEEEecC--C--------------CCCCceEEEEEeCCHHHHHH
Confidence               1 223445543221                 345666431  0              01267899999998655   


Q ss_pred             HHHHHHHCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          195 ACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       195 ~~~rl~~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++++|+++|+++...+.. +. ....+||+|||||.|||++..
T Consensus       229 ~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          229 CLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             HHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             HHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            599999999999876532 21 245789999999999999854

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.71  E-value=1.7e-16  Score=121.83  Aligned_cols=118  Identities=15%  Similarity=0.198  Sum_probs=81.2

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      +.-.++.|.|+|++++++||+++|||++..+.+  +  +  .++..+                   +..|+|........
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~-------------------~~~l~l~~~~~~~~   60 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS-------------------GCGLRLLEEPARKI   60 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECCCC--
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC-------------------CEEEEEEeCCCCCc
Confidence            455678999999999999999999999987632  2  2  333322                   45677765432111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCC----CeEEecCCCCCcc-eEEEEECCCCCEEEEEecCCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKTIG  238 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~G----v~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~~~  238 (244)
                            ...+    .+..|++|.|+|+++++++++++|    +++..++...+++ +.+||+|||||.|||.+...-.
T Consensus        61 ------~~~~----~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           61 ------IPDG----IARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             -----------------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECCTT
T ss_pred             ------CCCC----CceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccccc
Confidence                  0001    133699999999999999999665    4455555444444 5789999999999999976543

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.70  E-value=1.9e-16  Score=122.31  Aligned_cols=117  Identities=16%  Similarity=0.102  Sum_probs=81.2

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec-----C
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-----W  161 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~-----~  161 (244)
                      +++|+.|.|+|++++++||+++|||++..+..  ...+  .++..+                   +..|.+...     .
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~--~~~~~~-------------------~~~l~l~~~~~~~~~   64 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIF--RGLDTG-------------------KSCIGFNAHEAYELM   64 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTE--EEEECS-------------------SSEEEEECTHHHHHT
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCce--EEeecC-------------------CEEEEEcCccccccc
Confidence            89999999999999999999999999875432  1222  222221                   234444221     0


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEecC
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .... +    ..   ....+ .|++|.|+   |+++++++|+++|+++..++...++ .+.+||+|||||.|||++..
T Consensus        65 ~~~~-~----~~---~~~~~-~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           65 QLAQ-F----SE---TSGIK-FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             TCGG-G----CC---CBSCC-EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cccc-c----CC---CCCCe-EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            0000 0    00   01124 49999999   5999999999999998877744333 46789999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.70  E-value=5.5e-16  Score=136.30  Aligned_cols=151  Identities=15%  Similarity=0.155  Sum_probs=102.0

Q ss_pred             ccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEE
Q 026024           46 TSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS  125 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~  125 (244)
                      .-+++||.+++++-........  . .+..... .......+++|+.|.|+|++++++|| ++|||++......+.+...
T Consensus       115 ~~~~~DP~G~~iel~~~~~~~~--~-~~~~~~~-~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~  189 (323)
T 1f1u_A          115 SVRVEDPLGFPYEFFYETEHVE--R-LTQRYDL-YSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTY  189 (323)
T ss_dssp             EEEEECTTSCEEEEECCBCCCC--C-CTTCGGG-CCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEE
T ss_pred             EEEEECCCCCEEEEEEeccccc--c-ccccccc-CCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEE
Confidence            4457999999888433221110  0 0000000 12245789999999999999999999 9999999876654444334


Q ss_pred             EEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHHHHHHC
Q 026024          126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERL  202 (244)
Q Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~rl~~~  202 (244)
                      ..|+..+..                 ++.+++...  .           +    .+++|++|.|+|+++   ++++|+++
T Consensus       190 ~~f~~~~~~-----------------~~~~~~~~~--~-----------~----~~~~Hiaf~v~d~d~v~~~~~~l~~~  235 (323)
T 1f1u_A          190 AAWMHRKQT-----------------VHDTALTGG--N-----------G----PRMHHVAFATHEKHNIIQICDKMGAL  235 (323)
T ss_dssp             EEEEESSSS-----------------SCSEEEEES--S-----------B----SEEEEEEEECSSHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCC-----------------cccEEEeCC--C-----------C----CCceEEEEECCCHHHHHHHHHHHHHC
Confidence            556654321                 345665421  0           0    167899999999988   99999999


Q ss_pred             CC--eEEecC-CCCCc-ceEEEEECCCCCEEEEEecC
Q 026024          203 GV--EFAKKP-DGGKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       203 Gv--~v~~~p-~~g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                      |+  ++...+ ..+.. ..++|++|||||.|||+...
T Consensus       236 G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          236 RISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             TCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             CCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99  887544 22222 34689999999999998753

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.69  E-value=2.9e-16  Score=122.59  Aligned_cols=121  Identities=13%  Similarity=0.199  Sum_probs=86.0

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHH---HhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFY---SRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      ....+++|+.|.|+|++++++||   +++|||++.....  .+  . .|+. +                   +..|+|..
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~--~-~~~~-g-------------------~~~l~l~~   70 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG--K-SYKH-G-------------------KTYLVFVQ   70 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE--E-EEEE-T-------------------TEEEEEEE
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC--c-eEec-C-------------------CeEEEEEE
Confidence            34568999999999999999999   9999999987642  21  1 2333 1                   45677765


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEe-cCCC---CCcceEEEEECCCCCEEEEE
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAK-KPDG---GKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~-~p~~---g~~~~~~~~~DPdG~~IEi~  232 (244)
                      ........   ++..+   ..|+.|++|.|+   |+++++++|+++|+++.. .|..   +...+.+||+|||||.|||+
T Consensus        71 ~~~~~~~~---~~~~~---~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~  144 (146)
T 3ct8_A           71 TEDRFQTP---TFHRK---RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIV  144 (146)
T ss_dssp             CCGGGSCS---CCCTT---SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEE
T ss_pred             cCCCcccc---ccccc---CCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEE
Confidence            42210000   11111   136689999999   999999999999999887 3432   22345789999999999998


Q ss_pred             ec
Q 026024          233 DL  234 (244)
Q Consensus       233 e~  234 (244)
                      ++
T Consensus       145 ~p  146 (146)
T 3ct8_A          145 AP  146 (146)
T ss_dssp             CC
T ss_pred             eC
Confidence            63

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.69  E-value=2.3e-16  Score=136.50  Aligned_cols=154  Identities=16%  Similarity=0.146  Sum_probs=98.7

Q ss_pred             ccccccchhhhhhhccCCCCC-CCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeC---CC
Q 026024           46 TSWFKASNRFRLLSMASSEPK-ESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF---PE  121 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~---~~  121 (244)
                      .-+++||.++.++-....... ..+...+...  ..-....++++|+.|.|+|++++++||+++|||++......   ++
T Consensus       102 ~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~  179 (297)
T 1lgt_A          102 LITFADPFGLPLEIYYGASEVFEKPFLPGAAV--SGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPD  179 (297)
T ss_dssp             EEEEECTTSCEEEEEECCCBCTTSCCCCSSSC--SCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETT
T ss_pred             EEEEECCCCCEEEEEECccccccCCccCCCcc--cccccCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCC
Confidence            446899999988844322110 0000000000  00013567899999999999999999999999998765321   11


Q ss_pred             CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHH---HH
Q 026024          122 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ER  198 (244)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~---~r  198 (244)
                      ......|+..+..                 ++.+.+...  +.              +.+.+|++|.|+|++++.   ++
T Consensus       180 ~~~~~~~~~~~~~-----------------~~~l~l~~~--~~--------------~~~~~hiaf~v~d~~~~~~~~~~  226 (297)
T 1lgt_A          180 VTVPAYFLHCNER-----------------HHTLAIAAF--PL--------------PKRIHHFMLEVASLDDVGFAFDR  226 (297)
T ss_dssp             EEEEEEEEESSSB-----------------SCSEEEECC--CC--------------SSSEEEEEEEBSCHHHHHHHHHH
T ss_pred             ccceEEEEEeCCC-----------------cceEEEEcC--CC--------------CCCceEEEEeCCCHHHHHHHHHH
Confidence            1123345543221                 345666431  10              126789999999987766   89


Q ss_pred             HHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEecC
Q 026024          199 FERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       199 l~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~~  235 (244)
                       +++|+++...+.....  ..++||+|||||.|||++..
T Consensus       227 -~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          227 -VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             -HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             -HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence             9999999877643222  23589999999999999865

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.69  E-value=3.4e-17  Score=126.09  Aligned_cols=118  Identities=23%  Similarity=0.228  Sum_probs=80.7

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE-----e
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-----T  158 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL-----~  158 (244)
                      ..|+++|+.|.|+|++++++||+++|||++..+.  +  .+ ..+ ..                    +..+..     .
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~~~-~~--------------------g~~l~~~~~~~~   58 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-VLF-ET--------------------GFAIHEGRSLEE   58 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-EEE-TT--------------------SCEEEEHHHHHH
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-EEE-ec--------------------cceeccCchhhh
Confidence            3578999999999999999999999999988653  1  22 222 11                    222321     1


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecC
Q 026024          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       159 ~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~  235 (244)
                      ..+......   +...    ..+..|++|.|+|+++++++|++ |+++..++...+++ +.+|++|||||.|||++..
T Consensus        59 ~~~~~~~~~---~~~~----~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           59 TIWRTSSDA---QEAY----GRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             HHHSCCC-----CCCS----CCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             hccccCCcc---cccc----CCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            111100000   0111    12567999999999999999999 99988776544444 6789999999999999964

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=4.3e-16  Score=137.80  Aligned_cols=140  Identities=19%  Similarity=0.263  Sum_probs=99.2

Q ss_pred             ccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEE
Q 026024           46 TSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS  125 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~  125 (244)
                      .-+++||.++.++-+....                  ...-.+.|+.|.|+|++++++||+++|||++.......+    
T Consensus       136 ~~~~~DPdG~~iel~~~~~------------------~~~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----  193 (330)
T 3zi1_A          136 VFETEAPGGYKFYLQNRSL------------------PQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----  193 (330)
T ss_dssp             EEEEECTTSCEEEEESSCC------------------TTSCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----
T ss_pred             eEEEECCCCCEEEEEecCC------------------CCCCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----
Confidence            4567888888877544211                  011237899999999999999999999999988754322    


Q ss_pred             EEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCC
Q 026024          126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLG  203 (244)
Q Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~G  203 (244)
                      ..|+.+++.                 ...+++...+..        ...+    .++.|++|.|+  |+++++++|+++|
T Consensus       194 ~~~l~~g~~-----------------~~~l~l~~~~~~--------~~~~----~~~~hiaf~v~~~dld~~~~rl~~~G  244 (330)
T 3zi1_A          194 RALLGYADN-----------------QCKLELQGVKGG--------VDHA----AAFGRIAFSCPQKELPDLEDLMKREN  244 (330)
T ss_dssp             EEEEESSTT-----------------SCEEEEEECSSC--------CCCB----TTCCEEEEEECGGGHHHHHHHHHHTT
T ss_pred             EEEEEeCCc-----------------eEEEEECCCCCC--------CCCC----CCCceEEEEEEcccHHHHHHHHHHcC
Confidence            345555431                 456777554321        1111    26679999995  8999999999999


Q ss_pred             CeEEecCCC----CC-cceEEEEECCCCCEEEEEecCC
Q 026024          204 VEFAKKPDG----GK-LKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       204 v~v~~~p~~----g~-~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +++..++..    +. ..+.+||+|||||.|||++...
T Consensus       245 ~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~  282 (330)
T 3zi1_A          245 QKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEA  282 (330)
T ss_dssp             CEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHH
T ss_pred             CcEecCceecccCCCCceEEEEEECCCCCEEEEEEecc
Confidence            998766532    12 2357899999999999999644

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.69  E-value=4.9e-16  Score=120.60  Aligned_cols=122  Identities=15%  Similarity=0.141  Sum_probs=78.9

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  168 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~  168 (244)
                      ..+.|.|+|++++++||+++|||++.....  ...+  .++..+                   +..++|....+...  .
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g-------------------~~~l~l~~~~~~~~--~   61 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD-------------------GVDVMLEGIAGKSR--K   61 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET-------------------TEEEEEEEC--------
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC-------------------CeEEEEEeccCCCc--c
Confidence            368999999999999999999999885432  2223  233322                   34566654311110  0


Q ss_pred             CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHH-CCCeEEecCC--------CCCcceEEEEECCCCCEEEEEecCC
Q 026024          169 FKGYHNGNSEPRGFGHIGITVDDVYKACERFER-LGVEFAKKPD--------GGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       169 ~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~--------~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +.........+.|+ +++|.|+|+++++++|++ +|+++..++.        ....++.+||+|||||.|||++...
T Consensus        62 ~~~~~~~~~~~~g~-~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           62 WLSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             -----CCSSTTTTE-EEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             cccCccccCCCCce-EEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            00000000111355 499999999999999999 9999887664        2233457889999999999999754

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.68  E-value=4.2e-16  Score=134.58  Aligned_cols=153  Identities=14%  Similarity=0.093  Sum_probs=96.8

Q ss_pred             cccccchhhhhhhccCCCCC-CCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CC-
Q 026024           47 SWFKASNRFRLLSMASSEPK-ESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-  122 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~-  122 (244)
                      -+++||.++.++-....... ..+-..+...  +......++++|+.|.|+|++++++||+++|||++......+  .+ 
T Consensus       103 ~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~  180 (292)
T 1kw3_B          103 LCLQDPFGLPLEIYYGPAEIFHEPFLPSAPV--SGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPET  180 (292)
T ss_dssp             EEEECTTSCEEEEEECCCBCTTSCCCCSSSC--CCBCCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTE
T ss_pred             EEEECCCCCEEEEEECccccccCCCCCCCCc--cccccCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCc
Confidence            35899999998844322110 0000000000  001145688999999999999999999999999987653321  11 


Q ss_pred             cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHHHH
Q 026024          123 KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERF  199 (244)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~rl  199 (244)
                      .....|+..+..                 ++.+.+.....                +.+.+|++|.|+|+++   ++++|
T Consensus       181 ~~~~~~~~~~~~-----------------~~~~~~~~~~~----------------~~~~~hiaf~v~d~~~v~~~~~~l  227 (292)
T 1kw3_B          181 SVPAHFLHCNGR-----------------HHTIALAAFPI----------------PKRIHHFMLQANTIDDVGYAFDRL  227 (292)
T ss_dssp             EEEEEEEESSSB-----------------SCSEEEECCSC----------------SSSEEEEEEEBSSHHHHHHHHHHH
T ss_pred             cceEEEEEECCC-----------------cceEEEecCCC----------------CCceEEEEEEcCCHHHHHHHHHHH
Confidence            123345543211                 34455542100                1267899999998654   67899


Q ss_pred             HHCCCeEEecCCCCCc--ceEEEEECCCCC-EEEEEecC
Q 026024          200 ERLGVEFAKKPDGGKL--KGVAFIKDPDDY-WIEIFDLK  235 (244)
Q Consensus       200 ~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~-~IEi~e~~  235 (244)
                      + +|+++...|.....  ..++||+||||| .|||++..
T Consensus       228 ~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          228 D-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             H-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             h-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9 99998776632221  346799999999 99999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.68  E-value=6.2e-16  Score=135.30  Aligned_cols=143  Identities=11%  Similarity=0.136  Sum_probs=99.2

Q ss_pred             ccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEE
Q 026024           46 TSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS  125 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~  125 (244)
                      .-+++||.++.++-........  .   ...  +......++++|+.|.|+|++++++||+++|||++.....  + .  
T Consensus       107 ~~~~~DPdG~~iel~~~~~~~~--~---~~~--~~~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~-~--  174 (310)
T 3b59_A          107 GFRFFSPDGLLFEVSSDVAKGA--K---RDL--ARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D-F--  174 (310)
T ss_dssp             EEEEECTTSCEEEEEECCCCCC--C---CCC--CTTCCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T-T--
T ss_pred             EEEEECCCCCEEEEEEcccccC--C---Ccc--CCCCCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C-e--
Confidence            4468999999888433221110  0   010  0112456899999999999999999999999999987542  1 1  


Q ss_pred             EEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHH---HHHHHHC
Q 026024          126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERL  202 (244)
Q Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~---~~rl~~~  202 (244)
                      ..|+..+..                 ++.+.+....                  .|++|++|.|+|++++   +++|+++
T Consensus       175 ~~fl~~~~~-----------------~~~l~l~~~~------------------~g~~hi~f~v~d~d~~~~~~~~l~~~  219 (310)
T 3b59_A          175 MCFLRCNSA-----------------HHRIAILPGP------------------PCLNHVAYDMLSVDDMMRGAHRLKVK  219 (310)
T ss_dssp             EEEEESSSB-----------------SCSEEEEESS------------------SEEEEEEEECSSHHHHHHHHHHHHHT
T ss_pred             EEEEecCCC-----------------cceEEEECCC------------------CceEEEEEEcCCHHHHHHHHHHHHHc
Confidence            345544321                 4556664310                  1778999999997776   9999999


Q ss_pred             CCeEEecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          203 GVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       203 Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      |+++...+.. +. ...++|++|||||.|||.+..
T Consensus       220 G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          220 GIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             TCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             CCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            9998776532 21 234789999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.67  E-value=1.4e-15  Score=134.99  Aligned_cols=153  Identities=10%  Similarity=0.087  Sum_probs=100.6

Q ss_pred             cccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcE
Q 026024           45 TTSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF  124 (244)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~  124 (244)
                      ..-+++||.+++++-+........+... +.+   .......+|+||.|.|+|++++.+||+++|||++..+..    ..
T Consensus       115 ~~~~f~DPdGn~iEl~~~~~~~~~~~~~-~~v---~~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~  186 (335)
T 3oaj_A          115 QYVEFDDPHGLHLEIVEREEGEANTWTF-GEV---TPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DF  186 (335)
T ss_dssp             EEEEEECTTSCEEEEEECSCSCCCCCCB-TTB---CTTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TE
T ss_pred             EEEEEECCCCCEEEEEEeCCCCcCCCcC-CCC---ChhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CE
Confidence            3456899999999855433221111111 111   112356789999999999999999999999999987632    12


Q ss_pred             EEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHH
Q 026024          125 SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFER  201 (244)
Q Consensus       125 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~  201 (244)
                       ..|.. ++.                 +..|.+........         +....++++||||.|+|   +++++++|++
T Consensus       187 -~~~~~-g~~-----------------~~~l~l~~~~~~~~---------~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~  238 (335)
T 3oaj_A          187 -VRYRS-AGD-----------------IGNVIDLKLTPIGR---------GQMGAGTVHHIAWRANDDEDQLDWQRYIAS  238 (335)
T ss_dssp             -EEEEC-SSS-----------------SSCEEEEESSCCCB---------CBCSBTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred             -EEEEe-CCC-----------------CcEEEEEeCCCCCc---------CCCCCcceEEEEEEcCCHHHHHHHHHHHHH
Confidence             22222 211                 35667754322110         11112468999999998   6779999999


Q ss_pred             CCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          202 LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       202 ~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      +|+++......+ +...+||+|||||.|||...
T Consensus       239 ~G~~~~~~~~r~-~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          239 HGYGVTPVRDRN-YFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             TTCCCCCCEECS-SSEEEEEECTTSCEEEEEES
T ss_pred             CCCCccccccCC-cEEEEEEECCCCcEEEEEeC
Confidence            999865433222 33578999999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.67  E-value=8e-16  Score=133.11  Aligned_cols=146  Identities=13%  Similarity=0.118  Sum_probs=93.9

Q ss_pred             ccccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEE
Q 026024           46 TSWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFS  125 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~  125 (244)
                      ..+++||.+++++-.......       +..    .....-.+.|+.|.|+|++++++||+++|||++......++..+.
T Consensus       134 ~~~~~DP~G~~i~l~~~~~~~-------~~~----~~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~  202 (282)
T 3oxh_A          134 MSFITDPTGAAVGLWQANRHI-------GAT----LVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYR  202 (282)
T ss_dssp             EEEEECTTCCEEEEEEESSCC-------SCS----BCSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CE
T ss_pred             EEEEECCCCCEEEEEEccccC-------Ccc----ccCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceE
Confidence            456889999988743321110       000    011234689999999999999999999999998764311222332


Q ss_pred             EEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCe
Q 026024          126 LYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE  205 (244)
Q Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~  205 (244)
                        ++..++                  .....+... ...        .     ..+..|++|.|+|+++++++++++|++
T Consensus       203 --~~~~~~------------------~~~~~~~~~-~~~--------~-----~~~~~~~~~~v~dvd~~~~~~~~~G~~  248 (282)
T 3oxh_A          203 --VLKAGD------------------AEVGGCMEP-PMP--------G-----VPNHWHVYFAVDDADATAAKAAAAGGQ  248 (282)
T ss_dssp             --EEEETT------------------EEEEEEECC-SST--------T-----CCSEEEEEEECSCHHHHHHHHHHTTCE
T ss_pred             --EEEcCC------------------ccEeeecCC-CCC--------C-----CCCeEEEEEEeCCHHHHHHHHHHcCCE
Confidence              222211                  111222111 000        0     014469999999999999999999999


Q ss_pred             EEecCCCCCc-ceEEEEECCCCCEEEEEecCC
Q 026024          206 FAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       206 v~~~p~~g~~-~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +..+|...+. ++.+|++|||||.|||++...
T Consensus       249 ~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          249 VIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             EecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            9887754334 568999999999999999753

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.67  E-value=1.6e-15  Score=134.60  Aligned_cols=126  Identities=19%  Similarity=0.211  Sum_probs=88.8

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ...+|+||.|.|+|++++++||+++|||+++.+....  .+.+.+ +++.....               .+..|+++...
T Consensus         5 ~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l-~~~~~~g~---------------~g~~l~l~~~~   68 (335)
T 3oaj_A            5 KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHL-YFGNEGGK---------------PGTIITFFPWA   68 (335)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEE-EEESTTCC---------------TTSEEEEEECT
T ss_pred             cCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEE-EEecCCCC---------------CCcEEEEEECC
Confidence            3467999999999999999999999999998774321  222323 33322100               14577876542


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ....      ..   ....++.|++|.|+  |+++++++|+++|+++..  ........+||+|||||.|||++...
T Consensus        69 ~~~~------~~---~~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           69 GARQ------GV---IGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             TCCB------CB---CCBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETTEEEEEEECTTSCEEEEEECSC
T ss_pred             CCCC------CC---CCCCceEEEEEEecHHHHHHHHHHHHhCcceeee--eccCCcEEEEEECCCCCEEEEEEeCC
Confidence            2110      11   11237789999999  999999999999999875  22223457899999999999999754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.67  E-value=4.3e-16  Score=135.44  Aligned_cols=154  Identities=13%  Similarity=0.099  Sum_probs=95.9

Q ss_pred             cccccchhhhhhhccCCCC-CCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CC-
Q 026024           47 SWFKASNRFRLLSMASSEP-KESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-  122 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~-  122 (244)
                      -+++||.++.++-...... ...+. .++......-.+..++++|+.|.|+|++++++|| ++|||++......+  .+ 
T Consensus       109 ~~~~DPdG~~iel~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~  186 (302)
T 2ehz_A          109 MKTEDPGGNPTEIFWGPRIDMSNPF-HPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGM  186 (302)
T ss_dssp             EEEECTTSCEEEEEEEECBCTTSCC-CCSSCCSSCBCCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSC
T ss_pred             EEEECCCCCEEEEEECCCccCCCCc-cCCCCcccceecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCc
Confidence            3589999999884332110 00100 0000000000145689999999999999999999 99999987543211  22 


Q ss_pred             cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHHHH
Q 026024          123 KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERF  199 (244)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~rl  199 (244)
                      .....|+..+..                 ++.+.+...  .              .+.+.+|++|.|+|+++   ++++|
T Consensus       187 ~~~~~~~~~~~~-----------------~~~~~~~~~--~--------------~~~~~~hiaf~v~d~~~v~~~~~~l  233 (302)
T 2ehz_A          187 TAELSFMHCNAR-----------------DHSIAFGAM--P--------------AAKRLNHLMLEYTHMEDLGYTHQQF  233 (302)
T ss_dssp             EEEEEEEBSSSB-----------------SCSEEECSC--C--------------CSSSEEEEEEEESSHHHHHHHHHHH
T ss_pred             ceEEEEEEeCCC-----------------CcEEEEecC--C--------------CCCceeEEEEEcCCHHHHHHHHHHH
Confidence            223445543221                 234444311  0              01367899999998664   67899


Q ss_pred             HHCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          200 ERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       200 ~~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      +++|+++...|.. +. ...++||+|||||.|||+...
T Consensus       234 ~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          234 VKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            9999999876632 22 234689999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.66  E-value=4.9e-16  Score=135.16  Aligned_cols=155  Identities=13%  Similarity=0.102  Sum_probs=95.7

Q ss_pred             cccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CC-c
Q 026024           47 SWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-K  123 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~-~  123 (244)
                      -+++||.++.++-.............++........+..++++|+.|.|+|++++++|| ++|||++......+  .+ .
T Consensus       106 ~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~  184 (305)
T 2wl9_A          106 VKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAV  184 (305)
T ss_dssp             EEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCE
T ss_pred             EEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCcc
Confidence            45899999988844321110000000000000000135678999999999999999999 99999987542211  11 1


Q ss_pred             EEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHH
Q 026024          124 FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFE  200 (244)
Q Consensus       124 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~  200 (244)
                      ....|+..+..                 ++.+.+...  .              ...+++|++|.|+|   +++++++|+
T Consensus       185 ~~~~~~~~~~~-----------------~~~~~~~~~--~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~  231 (305)
T 2wl9_A          185 GTPVFMHCNDR-----------------HHSLAFGVG--P--------------MDKRINHLMIEYTHLDDLGYAHDLVR  231 (305)
T ss_dssp             ECCEEEESSSS-----------------SCSEEECCS--C--------------CSSSEEEEEEEESSHHHHHHHHHHHH
T ss_pred             ceEEEEEcCCC-----------------ceEEEEecC--C--------------CCCCceEEEEEcCCHHHHHHHHHHHH
Confidence            12334433211                 334554321  0              01267899999998   667889999


Q ss_pred             HCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEecC
Q 026024          201 RLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       201 ~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++|+++...+.. +. ...++||+|||||.|||+...
T Consensus       232 ~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          232 QQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             HTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            999999876522 21 134689999999999999864

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.63  E-value=1.2e-15  Score=118.95  Aligned_cols=122  Identities=12%  Similarity=0.074  Sum_probs=77.2

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++.......+ .+.. + +.                      .|+|. .....
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~-~-g~----------------------~l~l~-~~~~~   72 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD-Y-GC----------------------VFDYP-SEVAV   72 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE-E-EE----------------------EESSC-TTTTS
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE-E-cc----------------------EEEEe-ccCCC
Confidence            5789999999999999999999999999864221111 1222 2 21                      13320 01110


Q ss_pred             CCCCCCCCCCCCC---CCCcceEEEE-EeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNS---EPRGFGHIGI-TVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~---~p~g~~hi~f-~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~  235 (244)
                      ...  . ...+..   .....++.+| .|+|+++++++|+++|+++..++...+++ +.+||+|||||.|||+++.
T Consensus        73 ~~~--~-~~~~~~~~~g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           73 AHL--T-PFRGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CC-----CCCSEEEEESCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             ccc--c-cccccceeeccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            000  0 000000   0001122355 99999999999999999988777544444 5789999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.63  E-value=7.7e-15  Score=129.65  Aligned_cols=129  Identities=14%  Similarity=0.113  Sum_probs=87.3

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ...++++|+.|.|+|++++++||+++|||++....... +......+++.+...               ....|.+....
T Consensus        26 ~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~~~l~l~~~~   90 (338)
T 1zsw_A           26 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS---------------PGTELSFFEIP   90 (338)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCC---------------TTSEEEEEECT
T ss_pred             CcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCC---------------CCCEEEEEECC
Confidence            34578999999999999999999999999998764211 111122233321100               03556665432


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ....      ..   ....+..|++|.|+   |+++++++|+++|+++...+.. ...+.+||+|||||.|||++...
T Consensus        91 ~~~~------~~---~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~-~G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A           91 LVGR------TY---RGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTY-ANRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             TCCB------CB---CCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEE-TTEEEEEEECTTCCEEEEEECTT
T ss_pred             CCcc------Cc---CCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCcccccccc-CCcEEEEEECCCCCEEEEEEcCC
Confidence            1110      00   11236789999998   7999999999999998765431 11257899999999999999764

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.62  E-value=6.3e-15  Score=128.38  Aligned_cols=116  Identities=20%  Similarity=0.302  Sum_probs=84.7

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ...+++|+.|.|+|++++++||+++|||++..+..  +..  .++...++.                .+..+.+...  .
T Consensus         5 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~--~~l~~~~~~----------------~~~~l~l~~~--~   62 (309)
T 3hpy_A            5 GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGR--VYFKCWDER----------------DHSCYIIREA--D   62 (309)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSC--EEEECTTCC----------------BSCSEEEEEC--S
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCe--EEEEeccCC----------------CceEEEEEeC--C
Confidence            35789999999999999999999999999987632  111  222221211                0245555321  1


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCC--CCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~--g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .               .+..|++|.|+|   +++++++|+++|+++...+..  ...+..+||+|||||.|||++...
T Consensus        63 ~---------------~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           63 T---------------AGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             S---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             C---------------CceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            0               167899999986   999999999999998876642  233457899999999999999654

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.62  E-value=9.8e-15  Score=131.00  Aligned_cols=116  Identities=21%  Similarity=0.245  Sum_probs=85.4

Q ss_pred             CCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           81 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        81 ~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      |++..++|+||.|.|+|++++++||+++|||+++.+.+   .  . +++...+..               .+..+.+...
T Consensus        11 P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~--~-~~lr~~~~~---------------~~~~l~l~~~   69 (365)
T 4ghg_A           11 PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---N--Q-IYLRSFEEF---------------IHHNLVLTKG   69 (365)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--E-EEEECTTCC---------------SSCSEEEEEC
T ss_pred             CCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---C--E-EEEEeCCCC---------------cceEEEeccC
Confidence            44567999999999999999999999999999987632   1  2 333332210               1345666431


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC--CCcceEEEEECCCCCEEEEEec
Q 026024          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       161 ~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~--g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                        ..               .|+.|++|.|.   |+++++++|+++|+++...+..  ...+..+||+|||||.|||+..
T Consensus        70 --~~---------------~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           70 --PV---------------AALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             --SS---------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             --CC---------------CCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence              11               27789999997   5889999999999999876532  1224578999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.62  E-value=1e-14  Score=128.83  Aligned_cols=153  Identities=11%  Similarity=0.081  Sum_probs=96.5

Q ss_pred             ccccccchhhhhhhccCCCC--CC-CCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC
Q 026024           46 TSWFKASNRFRLLSMASSEP--KE-SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM  122 (244)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  122 (244)
                      .-+++||.++.++-......  .. .+. .+..  .+ .....++++|+.|.|+|++++++||+++|||++.....    
T Consensus       140 ~~~f~DPdG~~iel~~~~~~~~~~~~p~-~~~~--~~-~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----  211 (338)
T 1zsw_A          140 ALQFEDAEGLRLVLLVSNGEKVEHWETW-EKSE--VP-AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----  211 (338)
T ss_dssp             EEEEECTTCCEEEEEECTTCCCTTCCCC-TTCS--SC-GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----
T ss_pred             EEEEECCCCCEEEEEEcCCccccccCcC-cCCC--CC-ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----
Confidence            44678999999884433211  00 110 0000  01 22446799999999999999999999999999987642    


Q ss_pred             cEEEEEeec-CCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHH
Q 026024          123 KFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACER  198 (244)
Q Consensus       123 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~r  198 (244)
                      .+ ..|... ++.                ....+.+. . ....      ...+   ..++.|++|.|+   |+++++++
T Consensus       212 ~~-~~~~~~~~g~----------------~~~~~~~~-~-~~~~------~~~~---~~~~~hiaf~v~~~~dv~~~~~~  263 (338)
T 1zsw_A          212 QE-AIFQSIKGEA----------------FGEIVVKY-L-DGPT------EKPG---RGSIHHLAIRVKNDAELAYWEEQ  263 (338)
T ss_dssp             SE-EEEESSTTCS----------------TTCEEEEE-C-CSSB------CBCC---BTCEEEEEEEESSHHHHHHHHHH
T ss_pred             Ce-EEEEecCCCC----------------ceEEEEec-c-CCCC------CCCC---CCceEEEEEEeCCHHHHHHHHHH
Confidence            22 223221 110                01223332 1 1100      0011   136789999998   79999999


Q ss_pred             HHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          199 FERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       199 l~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      |+++|+++. ++........+||+|||||.|||++..
T Consensus       264 l~~~G~~~~-~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          264 VKQRGFHSS-GIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHTTCCCC-CCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHCCCcee-eeeecCceEEEEEECCCCCEEEEEEcC
Confidence            999999985 443333345799999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.62  E-value=1.5e-14  Score=128.15  Aligned_cols=116  Identities=21%  Similarity=0.322  Sum_probs=86.3

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++++|+.|.|+|++++++||+++|||++..+..   .  .+++...++.                ....+.+...  
T Consensus         7 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~~----------------~~~~l~l~~~--   63 (339)
T 3lm4_A            7 FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYEDP----------------YPWSLKITEA--   63 (339)
T ss_dssp             GSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTCS----------------SSCSEEEEEC--
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCCC----------------CceEEEEeeC--
Confidence            456899999999999999999999999999987632   1  2333332221                1344555322  


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..               .|+.|++|.|+|   +++++++|+++|+++...+.....+..+||+|||||.|||+....
T Consensus        64 ~~---------------~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (339)
T 3lm4_A           64 PE---------------AGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAE  125 (339)
T ss_dssp             SS---------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCBC
T ss_pred             CC---------------CCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEeee
Confidence            10               267899999997   999999999999999877643333457899999999999997643

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.60  E-value=5.2e-15  Score=128.55  Aligned_cols=116  Identities=17%  Similarity=0.254  Sum_probs=83.5

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..++++|+.|.|+|++++++||+++|||++..+..  .+.   .++...+..               ....+.+..  ..
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~~---------------~~~~l~~~~--~~   61 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEV---------------DKFSLVLRE--AD   61 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTCC---------------BSCSEEEEE--CS
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCCC---------------CceEEEEcc--CC
Confidence            35789999999999999999999999999987642  121   233321100               022233321  11


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCC-C-CCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-G-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~-~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .               .+..|++|.|   +|+++++++++++|+++...+. . ...+..+||+|||||.|||++...
T Consensus        62 ~---------------~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           62 E---------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             S---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             C---------------CCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence            0               1668999999   7999999999999999987764 2 223457889999999999999643

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.60  E-value=1.1e-14  Score=116.44  Aligned_cols=127  Identities=13%  Similarity=0.046  Sum_probs=79.9

Q ss_pred             CCceEEEEEEEEcCC--HHHHHHHHHhccCCEEEEeeeCC-------CCcEEEEEeecCCCCCCCCCCccceeeecCCCc
Q 026024           83 TNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA  153 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
                      ...+.-.++.|.|+|  +++|++||+++||+++.....++       .+.+....+..                   ++.
T Consensus        20 ~~~~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~g~   80 (166)
T 1xy7_A           20 HLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNL-------------------AGS   80 (166)
T ss_dssp             CCCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEE-------------------TTE
T ss_pred             CCCCceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEE-------------------CCe
Confidence            345667799999999  99999999999999987543111       11111111221                   133


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC--CcceEEEEECCCCCEEEE
Q 026024          154 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEI  231 (244)
Q Consensus       154 ~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g--~~~~~~~~~DPdG~~IEi  231 (244)
                      .|.+.... ...  .. +...+.  ..+ .||+|.|+|+++++++|+++|++ ..++.+.  ++++.++|+||+||.|+|
T Consensus        81 ~l~l~~~~-~~~--~~-~~~~~~--~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l  152 (166)
T 1xy7_A           81 SFVVCDVS-SLP--GF-STAKSE--GSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIF  152 (166)
T ss_dssp             EEEEEEGG-GST--TC-CCCCTT--SCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEE
T ss_pred             EEEEeCCC-ccc--CC-ccccCC--CCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEE
Confidence            45553211 110  00 010000  113 39999999999999999999999 8887654  446789999999999999


Q ss_pred             EecCC
Q 026024          232 FDLKT  236 (244)
Q Consensus       232 ~e~~~  236 (244)
                      ++...
T Consensus       153 ~~~~~  157 (166)
T 1xy7_A          153 AEKKT  157 (166)
T ss_dssp             EC---
T ss_pred             EeecC
Confidence            98643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.60  E-value=9.1e-15  Score=126.42  Aligned_cols=112  Identities=13%  Similarity=0.180  Sum_probs=83.2

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++|+|+.|.|+|++++++||+++|||++..+..  +  .  .++..++.                 ...+.+...  . 
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~--~--~~~~~~~~-----------------~~~l~~~~~--~-   55 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N--G--DLFRIDSR-----------------AWRIAVQQG--E-   55 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEESSSB-----------------SCSEEEEEC--T-
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C--e--EEEEeCCC-----------------cEEEEEecC--C-
Confidence            4689999999999999999999999999987632  2  1  23333221                 233444221  1 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                    ..++.|++|.|+   |+++++++|+++|+++...+..    ....+.+||+|||||.|||++...
T Consensus        56 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           56 --------------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             --------------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             --------------CCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence                          126789999998   9999999999999998876532    123457899999999999999754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.58  E-value=2.2e-14  Score=127.80  Aligned_cols=136  Identities=18%  Similarity=0.260  Sum_probs=91.5

Q ss_pred             CCceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeee--CCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEe
Q 026024           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~  158 (244)
                      ...++++|++|.|+  |++++++||+++|||++....+  .+.......++..++                 +...|+|.
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~-----------------g~~~l~l~  216 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS-----------------GAVTLTLI  216 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT-----------------SCCEEEEE
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC-----------------CCEEEEEe
Confidence            45689999999999  9999999999999999986532  122223344554322                 14678886


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC-------------CCc-----ceEEE
Q 026024          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-------------GKL-----KGVAF  220 (244)
Q Consensus       159 ~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~-------------g~~-----~~~~~  220 (244)
                      +............+...+ ...|++||+|.|+|+++++++|+++|+++...|..             ..+     .+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~-~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~  295 (357)
T 2r5v_A          217 EPDRNADPGQIDEFLKDH-QGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLA  295 (357)
T ss_dssp             EECTTSBCCHHHHHHHHH-TSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEE
T ss_pred             eecCCCCCchhHHHHHhc-CCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEE
Confidence            543211000000000000 11388999999999999999999999998877621             001     13789


Q ss_pred             EECCCCCEEEEEecCC
Q 026024          221 IKDPDDYWIEIFDLKT  236 (244)
Q Consensus       221 ~~DPdG~~IEi~e~~~  236 (244)
                      ++||||++|||++..-
T Consensus       296 ~~Dp~G~llqi~t~~~  311 (357)
T 2r5v_A          296 DEDHGGQLFQIFTAST  311 (357)
T ss_dssp             EEETTEEEEEEEBCCC
T ss_pred             ecCCCceEEEEEccCC
Confidence            9999999999998543

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.58  E-value=1.1e-14  Score=125.65  Aligned_cols=112  Identities=16%  Similarity=0.246  Sum_probs=82.4

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++..+..  + .   .++..++.                 ...+.+...  . 
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~-~---~~l~~~~~-----------------~~~l~~~~~--~-   55 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D-A---ALYRADQR-----------------AWRIAVQPG--E-   55 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEESSSB-----------------SCSEEEEEC--T-
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C-e---EEEEcCCc-----------------eEEEEEccC--C-
Confidence            3689999999999999999999999999987632  2 1   22333221                 222333211  1 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                    ..+..|++|.|+   |+++++++|+++|+++...+..    ....+.+||+|||||.|||++...
T Consensus        56 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           56 --------------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             --------------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             --------------CCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence                          026689999998   9999999999999998876631    123457889999999999998754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.58  E-value=4.1e-14  Score=124.32  Aligned_cols=116  Identities=17%  Similarity=0.217  Sum_probs=85.9

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++++|+.|.|+|++++++||+++|||++..+.   +.  ..++...++.                .+..|.+...  
T Consensus        13 ~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~--~~~l~~~~~~----------------~~~~l~l~~~--   69 (323)
T 1f1u_A           13 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN--TIYLRSLEEF----------------IHHNLVLRQG--   69 (323)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS--EEEEECTTCC----------------SSCSEEEEEC--
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CC--EEEEEecCCC----------------CcEEEEEEEC--
Confidence            45789999999999999999999999999988753   11  2233222211                0345666432  


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCC-CC-CcceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-GG-KLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~-~g-~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..               .++.|++|.|   +|+++++++|+++|+++...+. .. ..++.++|+|||||.|||++...
T Consensus        70 ~~---------------~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           70 PI---------------AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             SS---------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             CC---------------CCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence            00               1668999999   7899999999999999988765 22 23457889999999999998754

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.57  E-value=2.6e-14  Score=123.56  Aligned_cols=119  Identities=16%  Similarity=0.133  Sum_probs=82.3

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC--cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+.|+.|.|+|++++++||+++||+++..... +.+  .+..+..+  +                  .....+.......
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~~~~~~~~~~--g------------------~~~~~l~~~~~~~   90 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGGGVYSMATLN--G------------------EAVAAIAPMPPGA   90 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEET--T------------------EEEEEEEECCSCC
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCccCEEEEEeC--C------------------eeeEeeccCCCCC
Confidence            58999999999999999999999999876543 122  33322221  1                  1223333221110


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEEEEecCCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                        +    ..     ..+..+++|.|+|+++++++++++|+++..++... ..++.++|+|||||.|||++....
T Consensus        91 --~----~~-----~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~~  153 (282)
T 3oxh_A           91 --P----EG-----MPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANRH  153 (282)
T ss_dssp             --------------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESSC
T ss_pred             --C----CC-----CCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcccc
Confidence              0    00     01346899999999999999999999998776442 245678999999999999997653

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.56  E-value=2.7e-14  Score=121.97  Aligned_cols=114  Identities=14%  Similarity=0.193  Sum_probs=82.2

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++++|+.|.|+|++++++||+++|||++..+..    .+  +++..+                   ...|.|.....
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g-------------------~~~l~l~~~~~   76 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLG-------------------VSQIQFRAAAD   76 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEET-------------------TEEEEEEECCT
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeC-------------------CEEEEEEECCC
Confidence            445789999999999999999999999999887632    12  334332                   34566654211


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEec-CCC-----CCcceEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKK-PDG-----GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~-p~~-----g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .           +    .+..|++|.|+  |+++++++|+++ +++..+ +..     ......+||+|||||.|||++.
T Consensus        77 ~-----------~----~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~  140 (252)
T 3pkv_A           77 G-----------T----KPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISR  140 (252)
T ss_dssp             T-----------C----CCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred             C-----------C----CCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEe
Confidence            1           0    14579999985  699999999999 988652 211     2234578999999999999997


Q ss_pred             CCC
Q 026024          235 KTI  237 (244)
Q Consensus       235 ~~~  237 (244)
                      ...
T Consensus       141 ~~~  143 (252)
T 3pkv_A          141 QQA  143 (252)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            653

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.56  E-value=1.7e-14  Score=124.82  Aligned_cols=110  Identities=16%  Similarity=0.201  Sum_probs=80.8

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEE-eeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK-RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      .++++|+.|.|+|++++++||+++|||++.. +.   +..   .++..++.                 ...+.+...  .
T Consensus         3 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~---~~~~~~~~-----------------~~~l~l~~~--~   57 (300)
T 2zyq_A            3 IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGA---LYLRMDDF-----------------PARLVVVPG--E   57 (300)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSC---EEEESSSS-----------------SCSEEEEEC--S
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCe---EEEEeCCC-----------------cEEEEEecC--C
Confidence            4689999999999999999999999999876 32   111   23333221                 234555321  0


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEec
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                     ..+..|++|.|+|   +++++++|+++|+++...+..    ......+||+|||||.|||++.
T Consensus        58 ---------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           58 ---------------HDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             ---------------SCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             ---------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence                           0267899999974   899999999999998766532    1234578899999999999997

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.55  E-value=1.4e-13  Score=123.41  Aligned_cols=151  Identities=15%  Similarity=0.148  Sum_probs=100.9

Q ss_pred             cccccchhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEE
Q 026024           47 SWFKASNRFRLLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL  126 (244)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~  126 (244)
                      =++.||.+++++-.........+    .....+.......+|+|+.|.|.|++++.+||++ |||++......+++....
T Consensus       116 ~~f~DPdG~~iEl~~~~~~~~~~----~~~~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~  190 (365)
T 4ghg_A          116 LRVEDPLGFPYEFFFETTHVERL----HMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYA  190 (365)
T ss_dssp             EEEECTTSCEEEEECCBCCCCCC----TTCTTTCCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEE
T ss_pred             EEEECCCCCEEEEEEEeeccccc----cccccccccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeE
Confidence            45899999998843322111110    1111112234567899999999999999999965 999998776655555566


Q ss_pred             EEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHH---HHHHHHHCC
Q 026024          127 YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLG  203 (244)
Q Consensus       127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~---~~~rl~~~G  203 (244)
                      .|+.++..                 ++.+.+...  .               ..+++|++|+|+|+++   ++++|+++|
T Consensus       191 ~f~~~~~~-----------------hH~la~~~~--~---------------~~~lhHvaf~v~d~d~v~~~~d~l~~~g  236 (365)
T 4ghg_A          191 AWMHRKGT-----------------VHDTALTGG--N---------------GPRLHHVAFSTHEKHNIIQICDKMGALR  236 (365)
T ss_dssp             EEEESSSS-----------------SCSEEEEES--S---------------BSEEEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             EeeecCCc-----------------ccceeeecC--C---------------CCceeEEEEecCCHHHHHHHHHHHHhCC
Confidence            77776432                 566666432  1               1278999999997665   567888999


Q ss_pred             Ce--EEecC-CCCCc-ceEEEEECCCCCEEEEEecCC
Q 026024          204 VE--FAKKP-DGGKL-KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       204 v~--v~~~p-~~g~~-~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +.  +...| ..+.. ..++||+||+||+||+.....
T Consensus       237 ~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          237 ISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             CGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             CCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            85  34444 22222 236899999999999987543

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.53  E-value=4.2e-14  Score=122.88  Aligned_cols=111  Identities=17%  Similarity=0.264  Sum_probs=82.0

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++|+.|.|+|++++++||+++|||++.....  + ..  .++..++.                 +..|.|...  . 
T Consensus         4 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~~--~~~~~~~~-----------------~~~l~l~~~--~-   58 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D-DR--IYLRMDRW-----------------HHRIVLHAD--G-   58 (305)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T-TE--EEEECSSB-----------------SCSEEEECS--S-
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C-Ce--EEEEeCCC-----------------eEEEEEEEC--C-
Confidence            4689999999999999999999999999886211  2 21  23333221                 245666421  0 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                    ..+..|++|.|+   |+++++++|+++|+++...+..    ......+||+|||||.|||++.
T Consensus        59 --------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           59 --------------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             --------------CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             --------------CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence                          026689999997   6999999999999998876532    1224578999999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.52  E-value=7.1e-14  Score=121.39  Aligned_cols=113  Identities=18%  Similarity=0.204  Sum_probs=82.0

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..++++|+.|.|+|++++++||+++|||++..+..  +..   .++..+..                 +..+.|...  .
T Consensus         6 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~---~~~~~~~~-----------------~~~l~l~~~--~   61 (302)
T 2ehz_A            6 AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDR---FYLRMDYW-----------------HHRIVVHHN--G   61 (302)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SSE---EEEESSSB-----------------SCSEEEESS--C
T ss_pred             cccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Ccc---eEEEeCCC-----------------ceEEEEecC--C
Confidence            35789999999999999999999999999986521  111   22322211                 334555321  1


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCC----CcceEEEEECCCCCEEEEEecC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g----~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                     ..++.|++|.|+   |+++++++|+++|+++...+...    ..++.+||+|||||.|||++..
T Consensus        62 ---------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           62 ---------------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             ---------------CSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             ---------------CCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence                           026689999995   79999999999999988766321    2345789999999999999863

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.51  E-value=1.5e-13  Score=120.19  Aligned_cols=115  Identities=15%  Similarity=0.116  Sum_probs=84.6

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..++++|+.|.|+|++++++||+++|||++..+..    ..  .++..++..               .+..|.|....  
T Consensus         5 ~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~--~~l~~~~~~---------------~~~~l~l~~~~--   61 (310)
T 3b59_A            5 RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NN--AWFKAQGAD---------------EHHVVQLRRAD--   61 (310)
T ss_dssp             CEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEECTTSC---------------CSCSEEEEECS--
T ss_pred             ecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----Ce--EEEEECCCC---------------CCEEEEEEECC--
Confidence            45789999999999999999999999999887531    22  233322100               03556664321  


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCC---CCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~---g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                     ..+..|++|.|   +|+++++++|+++|+++...+..   ...+..++|+|||||.|||++...
T Consensus        62 ---------------~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           62 ---------------ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             ---------------SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             ---------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence                           01667999999   68999999999999998776632   223457889999999999998754

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.50  E-value=5.5e-13  Score=114.51  Aligned_cols=117  Identities=11%  Similarity=0.032  Sum_probs=79.7

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      ....++.|.|.|++++++||+++|||++......+ +.+  ..+..++..               ....+.+...  +. 
T Consensus       182 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~---------------~~~~~~~~~~--~~-  240 (301)
T 2zw5_A          182 TLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWS---------------AGPRFRLAAV--PG-  240 (301)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSS---------------SSSEEEEEEC--CC-
T ss_pred             cceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCc---------------cccccccccC--CC-
Confidence            34458899999999999999999999988544322 222  233322100               0122333111  10 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC-CHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd-Dvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                             ..+    ....+++|.|+ |+++++++++++|+++..++...+++ ..++|+|||||.|||.++
T Consensus       241 -------~~~----~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          241 -------PGP----VEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             -------SSC----CCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -------cCC----CCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence                   000    12358999999 99999999999999998877554443 678999999999999985

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.49  E-value=1.7e-12  Score=101.72  Aligned_cols=119  Identities=13%  Similarity=0.080  Sum_probs=79.2

Q ss_pred             eEEEEEEEEcC-CHHHHHHHHHhccCCEEEEeeeCCC------------CcEEEEEeecCCCCCCCCCCccceeeecCCC
Q 026024           86 YFMQQTMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPE------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKP  152 (244)
Q Consensus        86 ~~l~Hv~L~V~-Dle~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  152 (244)
                      |++ +..|.|. |+++|++||+++||+++.....+++            +......+..                   .+
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~~   62 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVV-------------------GS   62 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEE-------------------TT
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEE-------------------CC
Confidence            554 5889999 9999999999999999886543221            1111111111                   12


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCE
Q 026024          153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYW  228 (244)
Q Consensus       153 ~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~  228 (244)
                      ..|.+... .+..  .   ..    ...| .+|+|.|+|   +++++++|+ +|+++..++.+.+++ ++++|+||+||.
T Consensus        63 ~~l~~~d~-~~~~--~---~~----~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~  130 (149)
T 1u6l_A           63 FALMASDN-HPAY--P---YE----GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVA  130 (149)
T ss_dssp             EEEEEEEC-CTTS--C---CC----CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCE
T ss_pred             EEEEEEcC-CCcc--C---CC----CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCE
Confidence            33433321 1100  0   00    0124 489999998   889999985 899999888776666 578899999999


Q ss_pred             EEEEecCC
Q 026024          229 IEIFDLKT  236 (244)
Q Consensus       229 IEi~e~~~  236 (244)
                      |+|.+...
T Consensus       131 w~l~~~~~  138 (149)
T 1u6l_A          131 WMVNCEQD  138 (149)
T ss_dssp             EEEEESCC
T ss_pred             EEEEEecc
Confidence            99998644

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.48  E-value=1e-12  Score=118.30  Aligned_cols=129  Identities=19%  Similarity=0.170  Sum_probs=90.9

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ..++++||.|.|+|++++++||+++|||+++.+...+  ......++++.+                   ...++|....
T Consensus        19 ~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~   79 (381)
T 1t47_A           19 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVI   79 (381)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEES
T ss_pred             cCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-------------------CEEEEEecCC
Confidence            4589999999999999999999999999998764321  112344444432                   4567776532


Q ss_pred             CCCCCCC---CCCC--CCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC---CCcc-eEEEEECCCCCEEEEE
Q 026024          162 GTESDPD---FKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       162 ~~~~~~~---~~~~--~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~---g~~~-~~~~~~DPdG~~IEi~  232 (244)
                      .+.. +.   ...+  ..|    .|..|++|.|+|+++++++++++|+++..+|..   +.+. .+++|+||+|+.++|+
T Consensus        80 ~~~~-~~~~~~~~~~~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv  154 (381)
T 1t47_A           80 KPAT-PWGHFLADHVAEHG----DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLV  154 (381)
T ss_dssp             SCCS-HHHHHHHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEE
T ss_pred             CCCC-cchhHHHHHHHhcC----CceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEE
Confidence            2211 00   0000  012    278899999999999999999999999877742   2222 4678999999999999


Q ss_pred             ecCC
Q 026024          233 DLKT  236 (244)
Q Consensus       233 e~~~  236 (244)
                      ++..
T Consensus       155 ~~~~  158 (381)
T 1t47_A          155 DRTG  158 (381)
T ss_dssp             EEEE
T ss_pred             ecCC
Confidence            9743

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.44  E-value=7.6e-12  Score=96.34  Aligned_cols=116  Identities=6%  Similarity=0.054  Sum_probs=77.3

Q ss_pred             EEEEEEEEcC--CHHHHHHHHHhcc-CCEEEEeeeCCC------CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE
Q 026024           87 FMQQTMFRIK--DPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (244)
Q Consensus        87 ~l~Hv~L~V~--Dle~a~~FY~~vL-G~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL  157 (244)
                      ++. +.|.|.  |+++|++||+++| |+++.....+++      +......+..+                   +..+.+
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------g~~~~~   65 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHC   65 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEE
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC-------------------CEEEEE
Confidence            343 678887  9999999999999 999875322211      22211222211                   223333


Q ss_pred             eecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          158 THNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       158 ~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                      ........      ...+     ....++|.|+|   +++++++++ +|.++..++.+.+++ +.++++||+||.|+|..
T Consensus        66 ~~~~~~~~------~~~~-----~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~  133 (136)
T 1u7i_A           66 IDSHVRHA------FDFT-----PAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  133 (136)
T ss_dssp             EEESSCCS------CCCC-----TTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             ECCCCCCC------CCCC-----CceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEe
Confidence            22110000      1101     22489999999   999999999 999999998776665 57889999999999987


Q ss_pred             c
Q 026024          234 L  234 (244)
Q Consensus       234 ~  234 (244)
                      +
T Consensus       134 ~  134 (136)
T 1u7i_A          134 A  134 (136)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.43  E-value=4.2e-12  Score=112.97  Aligned_cols=127  Identities=15%  Similarity=0.136  Sum_probs=88.2

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++||.|.|+|++++++||+++|||+++.+....++.+  +++..+                   ...++|.....+.
T Consensus         3 i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~~--~~~~~g-------------------~~~l~l~~~~~~~   61 (357)
T 2r5v_A            3 NFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRS--IALRQG-------------------QVTLVLTEPTSDR   61 (357)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEEE--EEEEET-------------------TEEEEEEEESSTT
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCceE--EEEEeC-------------------CEEEEEeCCCCCC
Confidence            4789999999999999999999999999987654222222  233221                   4567775422211


Q ss_pred             CCC-CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC--CCcceEEEEECCCCCEEEEEecCCC
Q 026024          165 SDP-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       165 ~~~-~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~--g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      ... .+. ...+    .++.|++|.|+|+++++++++++|+++..++..  ......++|+||+|+.++|+++...
T Consensus        62 ~~~~~~~-~~~g----~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~  132 (357)
T 2r5v_A           62 HPAAAYL-QTHG----DGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGT  132 (357)
T ss_dssp             SHHHHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSS
T ss_pred             CHHHHHH-HhcC----CeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccC
Confidence            100 000 0012    278899999999999999999999999876632  1112467899999999999997543

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.41  E-value=1.7e-12  Score=116.94  Aligned_cols=134  Identities=15%  Similarity=0.239  Sum_probs=90.6

Q ss_pred             CCceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeee-----CCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEE
Q 026024           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI  155 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  155 (244)
                      ....+++|++|.|+  |++++++||+++|||++....+     .+.......++....                 +...|
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------g~v~i  242 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKF  242 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEE
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC-----------------CcEEE
Confidence            45679999999999  9999999999999999886632     222233334443221                 14567


Q ss_pred             EEeecCCCCCCCC---CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-----------------
Q 026024          156 ELTHNWGTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-----------------  215 (244)
Q Consensus       156 eL~~~~~~~~~~~---~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-----------------  215 (244)
                      +|.+.........   +.....+    .|++||||.|+|+++++++|+++|+++...|.....                 
T Consensus       243 ~l~~~~~~~~~s~~~~~l~~~~g----~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~  318 (381)
T 1t47_A          243 PINEPALAKKKSQIDEYLEFYGG----AGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLR  318 (381)
T ss_dssp             EEEEECCSSSCCHHHHHHHHHTS----CEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHH
T ss_pred             EEecCCcCCCccHHHHHHHHhCC----CCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHH
Confidence            7765431111000   0000112    388999999999999999999999999887632110                 


Q ss_pred             -ceEEEEECCCCCEEEEEecCCC
Q 026024          216 -KGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       216 -~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                       .+++|-+||+|++++|+...-.
T Consensus       319 ~~~il~d~d~~g~llqift~~~~  341 (381)
T 1t47_A          319 ELKILADRDEDGYLLQIFTKPVQ  341 (381)
T ss_dssp             HHTCEEEECSSCEEEEEEBCCSS
T ss_pred             HhCeEEeeCCCCeEEEEeccCCC
Confidence             1257778999999998876543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.40  E-value=3e-12  Score=116.93  Aligned_cols=135  Identities=18%  Similarity=0.147  Sum_probs=92.0

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC--CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ..++++||.|.|+|++++++||+++|||+++.+.+.+  ...+..+++..+                   ...++|....
T Consensus        22 ~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-------------------~~~l~L~~~~   82 (424)
T 1sqd_A           22 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPY   82 (424)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEEC
T ss_pred             cCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-------------------CEEEEEecCC
Confidence            4578999999999999999999999999998775422  223444555432                   4567776542


Q ss_pred             CCCC---------CCCCCCCCCC------CCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCC
Q 026024          162 GTES---------DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPD  225 (244)
Q Consensus       162 ~~~~---------~~~~~~~~~g------~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPd  225 (244)
                      .+..         ......+...      ...+.|+.||+|.|+|+++++++++++|+++..+|... ......++++|+
T Consensus        83 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~G  162 (424)
T 1sqd_A           83 SPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYG  162 (424)
T ss_dssp             CGGGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEET
T ss_pred             CCcccccccccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCC
Confidence            1110         0000001000      00013889999999999999999999999998877432 113467788999


Q ss_pred             CCEEEEEecCCC
Q 026024          226 DYWIEIFDLKTI  237 (244)
Q Consensus       226 G~~IEi~e~~~~  237 (244)
                      |++++|+++...
T Consensus       163 g~~~~lvd~~g~  174 (424)
T 1sqd_A          163 DVVLRYVSYKAE  174 (424)
T ss_dssp             TEEEEEEEECCC
T ss_pred             CcEEEEEecCCC
Confidence            999999998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.32  E-value=1.7e-11  Score=111.70  Aligned_cols=136  Identities=13%  Similarity=0.069  Sum_probs=92.2

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC--CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ...++++||.|.|+|++++++||+++|||+++.+...+.  .....+++..+                   ...|+|...
T Consensus        27 ~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-------------------~~~l~L~~~   87 (418)
T 1sp8_A           27 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAP   87 (418)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             ccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-------------------CEEEEEecC
Confidence            446899999999999999999999999999887753221  23455555532                   466777654


Q ss_pred             CCCCC---CCCCCCCCCC------CCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEE
Q 026024          161 WGTES---DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIE  230 (244)
Q Consensus       161 ~~~~~---~~~~~~~~~g------~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IE  230 (244)
                      .....   ......|...      ...+.|..||+|.|+|+++++++++++|+++..+|... ....+.++++|+|..++
T Consensus        88 ~~~~~~~~~~p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~  167 (418)
T 1sp8_A           88 YAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLR  167 (418)
T ss_dssp             CCSSCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEE
T ss_pred             CCCcccccccccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEE
Confidence            22100   0000000000      00013889999999999999999999999998877321 11235677899999999


Q ss_pred             EEecCCC
Q 026024          231 IFDLKTI  237 (244)
Q Consensus       231 i~e~~~~  237 (244)
                      |+++...
T Consensus       168 lvd~~~~  174 (418)
T 1sp8_A          168 YVSYPDG  174 (418)
T ss_dssp             EEECCTT
T ss_pred             EEccCCC
Confidence            9998643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=1e-11  Score=110.72  Aligned_cols=133  Identities=13%  Similarity=0.214  Sum_probs=87.1

Q ss_pred             CCceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCC--CcE--EEEEeecCCCCCCCCCCccceeeecCCCcEEE
Q 026024           83 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKF--SLYFLGYEDTASAPADPVDRTVWTFGKPATIE  156 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~le  156 (244)
                      ....+|+|++|.|+  |++++++||+++|||++....+.++  ...  ...++..                   +...|+
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~i~  214 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-------------------GMIRIP  214 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-------------------SSCEEE
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC-------------------CCEEEE
Confidence            34578999999999  9999999999999999987653221  111  1222221                   246788


Q ss_pred             Eeec-CCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEe-cCC---------CCCcc---------
Q 026024          157 LTHN-WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-KPD---------GGKLK---------  216 (244)
Q Consensus       157 L~~~-~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~-~p~---------~g~~~---------  216 (244)
                      |.+. ..... + ...+.. .....|++||||.|+|+++++++|+++|+++.. .|.         .+..+         
T Consensus       215 L~~~~~~~~~-~-~~~~~~-~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~  291 (357)
T 1cjx_A          215 LNEESSKGAG-Q-IEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQAR  291 (357)
T ss_dssp             EEEECTTCCS-H-HHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHH
T ss_pred             EeeecCCCCC-h-HHHhHH-hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHc
Confidence            8654 11110 0 000000 001137899999999999999999999999887 551         11111         


Q ss_pred             eEEEEEC----CCCCEEEEEecCCC
Q 026024          217 GVAFIKD----PDDYWIEIFDLKTI  237 (244)
Q Consensus       217 ~~~~~~D----PdG~~IEi~e~~~~  237 (244)
                      +++|-+|    |+|++++|+...-.
T Consensus       292 ~il~d~d~~~~~~g~llqift~~~~  316 (357)
T 1cjx_A          292 GILLDGSSVEGDKRLLLQIFSETLM  316 (357)
T ss_dssp             TCEEEEEEETTEEEEEEEEEBCCCB
T ss_pred             CeEEecCCCCCCCCeEEEEeccCCC
Confidence            2477788    88999888876543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.27  E-value=1.1e-10  Score=105.63  Aligned_cols=132  Identities=12%  Similarity=0.117  Sum_probs=92.4

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC-c-EEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-K-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ...++++||.|.|+|++++++||+++|||+++.....+.+ . ...+++..+                   ...++|..+
T Consensus         7 ~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G-------------------~i~~~L~~p   67 (393)
T 3isq_A            7 GRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG-------------------KIVFVLSSA   67 (393)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC-------------------CEEEEEecC
Confidence            4568999999999999999999999999999876443211 1 223334322                   467777653


Q ss_pred             CCCCCCCCCCCC--CCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC---CCc-ceEEEEECCCCCEEEEEec
Q 026024          161 WGTESDPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL-KGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       161 ~~~~~~~~~~~~--~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~---g~~-~~~~~~~DPdG~~IEi~e~  234 (244)
                      ..+...+ ...+  ..|    .|..|++|.|+|+++++++++++|++++.+|..   +.. ..++.|++|.|..+.|+++
T Consensus        68 ~~p~s~~-~a~fl~~hG----~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           68 LNPWNKE-MGDHLVKHG----DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             SSTTCHH-HHHHHHHHC----SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCCCchH-HHHHHHhcC----CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            2221100 0000  012    278999999999999999999999999988842   222 2467799999999999997


Q ss_pred             CCCC
Q 026024          235 KTIG  238 (244)
Q Consensus       235 ~~~~  238 (244)
                      ....
T Consensus       143 ~~y~  146 (393)
T 3isq_A          143 MNYI  146 (393)
T ss_dssp             ESCC
T ss_pred             ccCc
Confidence            6543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.26  E-value=1.5e-11  Score=112.32  Aligned_cols=107  Identities=11%  Similarity=0.284  Sum_probs=73.5

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL  157 (244)
                      ....+|+|++|.|+|++++++||+++|||++..+.+.++     ..+...++...+                 +...|+|
T Consensus       198 ~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~~~l~l  260 (424)
T 1sqd_A          198 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPI  260 (424)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEE
T ss_pred             CCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-----------------CcEEEEE
Confidence            345789999999999999999999999999987764322     123334444322                 2567787


Q ss_pred             eecCCC-CCCCCCCCC---CCCCCCCCcceEEEEEeCCHHHHHHHHHH----CCCeEEecC
Q 026024          158 THNWGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  210 (244)
Q Consensus       158 ~~~~~~-~~~~~~~~~---~~g~~~p~g~~hi~f~VdDvd~~~~rl~~----~Gv~v~~~p  210 (244)
                      .+.... ........|   ..|    .|++||||.|+|+++++++|++    +|+++...|
T Consensus       261 ~e~~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          261 NEPVHGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             EEECCC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhhhcCC----CCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            665311 010000011   123    2899999999999999999999    899999865

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.26  E-value=1.5e-10  Score=89.88  Aligned_cols=117  Identities=6%  Similarity=-0.011  Sum_probs=74.4

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhcc-CCEEEEeeeCCC------CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEe
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vL-G~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~  158 (244)
                      +++...-+.+.|.++|++||+++| |+++.....+.+      +.....-+..+                   +..+.+.
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~-------------------~~~~m~~   64 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAI   64 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC-------------------CEEEEEE
Confidence            445555555669999999999999 999875433221      12212222211                   2222221


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       159 ~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                       ...+.       .  +    .. ..|++.|+|   +++++++|. .|+++..++.+..++ +..+|+||+|+.|+|...
T Consensus        65 -d~~~~-------~--~----~~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           65 -DANSG-------T--E----LP-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             -C--------------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             -CCCCC-------C--C----ce-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence             11110       0  0    01 378899987   888899998 799999988776665 578999999999999986


Q ss_pred             CCC
Q 026024          235 KTI  237 (244)
Q Consensus       235 ~~~  237 (244)
                      ...
T Consensus       129 ~~~  131 (139)
T 1tsj_A          129 EEG  131 (139)
T ss_dssp             C--
T ss_pred             ccc
Confidence            543

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.25  E-value=2.6e-11  Score=110.60  Aligned_cols=107  Identities=13%  Similarity=0.276  Sum_probs=73.4

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC-----cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL  157 (244)
                      ....+|+|++|.|+|++++++||+++|||++....+.++.     .....++..+.                 +...|+|
T Consensus       195 ~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~i~l~l  257 (418)
T 1sp8_A          195 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPL  257 (418)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEE
T ss_pred             CCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC-----------------CcEEEEE
Confidence            3467899999999999999999999999999877643221     22334444322                 2467777


Q ss_pred             eecCCC-CCCCCCCCC---CCCCCCCCcceEEEEEeCCHHHHHHHHHH----CCCeEEecC
Q 026024          158 THNWGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  210 (244)
Q Consensus       158 ~~~~~~-~~~~~~~~~---~~g~~~p~g~~hi~f~VdDvd~~~~rl~~----~Gv~v~~~p  210 (244)
                      .+.... ........+   ..|    .|++||+|.|+|+++++++|++    +|+++...|
T Consensus       258 ~e~~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          258 NEPVHGTKRRSQIQTFLDHHGG----PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             EEECCCSSSCCHHHHHHHHHTS----SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             eecccccCCCcchhhhhhccCC----CCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            664311 110000001   123    3899999999999999999999    799999875

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.21  E-value=5.4e-10  Score=89.86  Aligned_cols=116  Identities=16%  Similarity=0.135  Sum_probs=78.3

Q ss_pred             EEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC--------------CcEEEEEeecCCCCCCCCCCccceeeecCCCcE
Q 026024           89 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT  154 (244)
Q Consensus        89 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  154 (244)
                      ....|.+.|.++|++||+++||++++....+.+              +......+..                   ++..
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i-------------------~g~~   87 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEV-------------------LGVK   87 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEE-------------------TTEE
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEE-------------------CCEE
Confidence            466788889999999999999999876544311              1122222222                   1344


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEe--------CCHHHHHHHHHHCC-CeEEecCCCCCcc-eEEEEECC
Q 026024          155 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--------DDVYKACERFERLG-VEFAKKPDGGKLK-GVAFIKDP  224 (244)
Q Consensus       155 leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~V--------dDvd~~~~rl~~~G-v~v~~~p~~g~~~-~~~~~~DP  224 (244)
                      |.+....+..       +..++    + ..+++.|        +|+++++++|.+.| +++..++.+..++ +..+|+||
T Consensus        88 lm~~D~~g~~-------~~~~~----~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~Dp  155 (172)
T 3l20_A           88 VLCSDSFGRA-------DKINN----G-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDK  155 (172)
T ss_dssp             EEEEECTTCC-------CCCCS----S-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECT
T ss_pred             EEEECCCCCC-------CCCCC----c-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECC
Confidence            5554322111       11111    2 3577777        58999999999999 7999988766665 57889999


Q ss_pred             CCCEEEEEecC
Q 026024          225 DDYWIEIFDLK  235 (244)
Q Consensus       225 dG~~IEi~e~~  235 (244)
                      +||.|+|....
T Consensus       156 fG~~W~i~~~~  166 (172)
T 3l20_A          156 YGVRWMLHGQD  166 (172)
T ss_dssp             TSCEEEEEEEC
T ss_pred             CCCEEEEEeCC
Confidence            99999998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.19  E-value=5.1e-10  Score=86.82  Aligned_cols=114  Identities=5%  Similarity=0.073  Sum_probs=74.4

Q ss_pred             EEEEEcC-CHHHHHHHHHhccC-CEEEEeeeCC------CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           90 QTMFRIK-DPKVSLDFYSRVLG-MSLLKRLDFP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        90 Hv~L~V~-Dle~a~~FY~~vLG-~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ...|.+. |.++|++||+++|| .++.....++      ++......+..                   ++..|.+....
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i-------------------~g~~lm~~d~~   72 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTL-------------------NGQEFMCIDSY   72 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEE-------------------TTEEEEEEECS
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEE-------------------CCEEEEEEcCC
Confidence            4567777 89999999999999 5665432221      22222222222                   13445443221


Q ss_pred             CCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          162 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       162 ~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      ...      ++..++    + ..|+|.|+|   +++++++|. .|.++..++.+.+++ +..+++||+|+.|.|.-.
T Consensus        73 ~~~------~~~~~~----~-~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           73 VNH------NFTFTP----A-MSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             SCC------SCCCCT----T-SCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             CCC------CCCCCC----C-EEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            110      011111    2 479999999   999999995 688999888766665 578899999999999753

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.12  E-value=3.5e-10  Score=100.71  Aligned_cols=123  Identities=14%  Similarity=0.096  Sum_probs=83.4

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..++++||.|.|+|++++.+|| ++|||+++.+..  ...+  +++..+                   ...+.+....+.
T Consensus         9 ~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~--~~~~--~l~~~g-------------------~~~l~l~~~~~~   64 (357)
T 1cjx_A            9 GLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHR--SKNV--HLYRQG-------------------EINLILNNEPNS   64 (357)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEES--SSSE--EEEEET-------------------TEEEEEECCSSS
T ss_pred             ccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC--CeeE--EEEecC-------------------CEEEEEECCCCc
Confidence            4689999999999999999999 899999987643  2222  222221                   345555421110


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      . ...+. ...|    .++.|++|.|+|+++++++++++|+++...+..........+++|+|..++|+++..
T Consensus        65 ~-~~~~~-~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           65 I-ASYFA-AEHG----PSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             H-HHHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             h-hhhhh-hhcC----CeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCCC
Confidence            0 00000 0112    378999999999999999999999998776632111134668999999999998754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.10  E-value=1.6e-10  Score=104.43  Aligned_cols=107  Identities=14%  Similarity=0.263  Sum_probs=74.2

Q ss_pred             CCceEEEEEEEEcCC--HHHHHHHHHhccCCEEEEeee---C--CCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEE
Q 026024           83 TNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLD---F--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI  155 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~~---~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  155 (244)
                      ....+++|+++.|+|  ++++++||+++|||++....+   .  +.......++...+                 +...|
T Consensus       169 ~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~-----------------g~v~i  231 (393)
T 3isq_A          169 CSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIKM  231 (393)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT-----------------SSCEE
T ss_pred             CCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC-----------------CCEEE
Confidence            345789999999998  999999999999999887643   1  12233334443221                 14678


Q ss_pred             EEeecCCCCCCCC---CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          156 ELTHNWGTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       156 eL~~~~~~~~~~~---~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      +|.+.........   +-....|    .|++||||.|+|+++++++|+++|++++..|
T Consensus       232 ~L~ep~~~~~~s~I~~fL~~~~G----~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          232 PINEPAPGKKKSQIQEYVDYNGG----AGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             EEEEEECCSBCCHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             EEecCCCCCCCCHHHHHHHHcCC----CCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            8876532111100   0000122    3899999999999999999999999999876

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.02  E-value=3.3e-09  Score=89.08  Aligned_cols=120  Identities=17%  Similarity=0.155  Sum_probs=77.2

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      ..+...+..|+|+|.+++++||+++|||++..+..      ..+.++.+..                 ...|.|-+.+..
T Consensus         7 ~~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~-----------------~~~L~lEEsp~~   63 (244)
T 3e0r_A            7 NQIVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG-----------------LEKLVLEEAPSM   63 (244)
T ss_dssp             CCEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC-----------------CEEEEEEECCTT
T ss_pred             cceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC-----------------cceEEEEeCCCc
Confidence            34667789999999999999999999999988743      2455664321                 334555442211


Q ss_pred             CCCCCCCCCCCCCCCCCcceEE---EEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHI---GITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  239 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi---~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~~  239 (244)
                      ..      .     .-.|.-|+   ++.|++-+++-.-|.. +.++.. ...+.++..+|+.||+||.|||........
T Consensus        64 ~~------~-----~~~Glkh~a~i~i~vp~~~el~~lL~~-~~~~~~-~~~gdhgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           64 RT------R-----KVEGRKKLARLIVKVENPLEIEGILSK-TDSIHR-LYKGQNGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             TC------B-----CCCSSCSEEEEEEEESSHHHHHHHHTT-CSCCSE-EEECSSSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             cc------c-----cccccceeeeEEEEcCCHHHHHHHHhc-cccccc-ccccCCcEEEEEECCCCCeEEEEEcCCHHH
Confidence            10      0     01266677   5999986665544433 544321 112333446999999999999998766554

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.24  E-value=2.6e-05  Score=61.83  Aligned_cols=104  Identities=12%  Similarity=0.056  Sum_probs=66.4

Q ss_pred             EEEEEcC-CHHHHHHHHHhcc-CCEEEEeeeCC-------CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           90 QTMFRIK-DPKVSLDFYSRVL-GMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        90 Hv~L~V~-Dle~a~~FY~~vL-G~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ...|.+. |.+++++||+++| |.++.....++       ++.....-+..+                   +..+.+...
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~-------------------g~~~m~~d~   68 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-------------------GIPCLGLNG   68 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-------------------TEEEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC-------------------CEEEEEECC
Confidence            4567777 9999999999999 99887533221       122222222221                   234444321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       161 ~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                       .+    .   +...    .+ ..|++.|+|   +++++++|.+.|.++.      .+   ..++||.|+.|.|..+
T Consensus        69 -~p----~---~~~~----~~-~sl~v~~~d~~e~d~~~~~L~~~Gg~v~------~~---G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           69 -GP----A---FRHS----EA-FSFQVATDDQAETDRLWNAIVDNGGEES------AC---GWCRDKWGISWQITPR  123 (163)
T ss_dssp             -CT----T---CCCC----TT-EEEEEEESSHHHHHHHHHHHHHTTCEEC------ST---TEEECTTSCEEEEEEH
T ss_pred             -CC----C---cCCC----Cc-eEEEEEeCCHHHHHHHHHHHHhCCCEEE------EE---EEEECCCCCEEEEEeE
Confidence             11    1   1111    13 378899987   7888999988888877      22   2689999999999875

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.63  E-value=0.00012  Score=71.96  Aligned_cols=52  Identities=15%  Similarity=0.193  Sum_probs=43.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEecCC
Q 026024          183 GHIGITVDDVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       183 ~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .|+.|.++|++++.+.|.+.+.++-.-|.+ ++  ..+|+.||+||+|+|.+..+
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~--~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP--FEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC--EEECCSSCCEEEECC-CCSS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC--ceEEeECCCCCEEEEeccCC
Confidence            399999999999999999999887766642 32  36899999999999999765

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.33  E-value=0.00053  Score=58.73  Aligned_cols=96  Identities=14%  Similarity=0.145  Sum_probs=60.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccC-----CEEEEeeeCCCCc--EEEEEeecCCCCCCCCCCccceeeecCCCcEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLG-----MSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATI  155 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG-----~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  155 (244)
                      .+.++++|+.+.|.+++        .||     |.+.....-+..+  ..++++                     .+..|
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~f---------------------dg~YL   70 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYI---------------------NENYI   70 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEEC---------------------SSSEE
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEee---------------------CCEEE
Confidence            46789999999999884        567     8876644323222  223333                     26799


Q ss_pred             EEeecCCCCC--------CCCCCCCCCC---CCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEe
Q 026024          156 ELTHNWGTES--------DPDFKGYHNG---NSEPRGFGHIGITVDDVYKACERFERLGVEFAK  208 (244)
Q Consensus       156 eL~~~~~~~~--------~~~~~~~~~g---~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~  208 (244)
                      ||+.....+.        .+.+ .+...   .....|+.++++.++|+++..++++++|+.+..
T Consensus        71 ElIai~~~~~~~~~~~~~~~~~-~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           71 ELLDVENNEKLKKMAKTIEGGV-AFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             EEEEESCHHHHHHHTTSTGGGT-CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             EEEeecCcccccccccccCccc-hHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            9987543211        0100 01000   112249999999999999999999999997653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.71  E-value=0.0021  Score=53.84  Aligned_cols=47  Identities=15%  Similarity=0.157  Sum_probs=35.2

Q ss_pred             cceEEEEEeC--CHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          181 GFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       181 g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      |+..+-|.|+  |+.++.++|++.|.-+ ..-     .+++.+.||.|+.|-|.+
T Consensus       195 gLe~l~~~v~~~dl~~l~~~L~~~g~~i-dkk-----~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          195 DLSMLKFLVNELDIASLRQKFESTEYFI-PKS-----EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SEEEEEEEESSCCHHHHHHHTTTSCEEC-CTT-----CCEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEeCHHHHHHHHHHHHhCCceE-ccc-----CCEEEEECCCCCEEEEEE
Confidence            6677888886  6889999999887622 222     345778999999987764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.41  E-value=0.029  Score=47.05  Aligned_cols=120  Identities=18%  Similarity=0.138  Sum_probs=72.7

Q ss_pred             EEEEEEEEcC--CHHHHHHHHHhccCCEEEEe--ee----CCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEe
Q 026024           87 FMQQTMFRIK--DPKVSLDFYSRVLGMSLLKR--LD----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (244)
Q Consensus        87 ~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~--~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~  158 (244)
                      .+.|+++.|.  |+++..+..++.  .++...  ..    ...+ ...+++...+                  +..+||.
T Consensus        80 ~~~hiaf~V~~~dld~~~~rL~~~--v~~~~~~~~~~~~~~~~g-~~~~~f~DPd------------------Gn~iEl~  138 (252)
T 3pkv_A           80 PFYHIAINIAANHFQEGKAWLSGF--GELLTENDEDQAYFPFFN-AYSCYVEDPS------------------GNIIELI  138 (252)
T ss_dssp             CCCEEEEEECTTCHHHHHHHHTTS--SCCCCBTTBSCEEETTTT-EEEEEEECTT------------------CCEEEEE
T ss_pred             CeeEEEEEecHHHHHHHHHHHHhc--ceEeccCCccccccccCC-eEEEEEECCC------------------CCEEEEE
Confidence            3779999875  567776666554  333221  00    1112 2344444333                  6789998


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       159 ~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      ....... ....++.  .....|+.|+.+.|+|+++..+.++..|++......  ....+.+.-| +|.+|.+-.
T Consensus       139 ~~~~~~~-~~~~~~~--~~~i~glghV~L~v~d~~~~~~fl~~LG~~~~~~~~--~~~~f~~~G~-~g~~i~v~~  207 (252)
T 3pkv_A          139 SRQQAAP-VLDKPFS--ADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQI--EPAGLNFIGD-QDLFLLLGP  207 (252)
T ss_dssp             EESSSSC-CCCSCCC--GGGCCEEEEEEEECSCHHHHHHHHHHTTCCCCGGGC--CTTSCEEEEE-TTEEEEEEC
T ss_pred             EeCCCCc-cccCCCC--HHHCcEeeeEEEEeCCHHHHHHHHHHcCCCcccCCC--ChheEEEcCC-CcEEEEEcC
Confidence            7543211 0111111  123469999999999999999999779998876542  2344566788 888777744

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=93.63  E-value=0.24  Score=35.92  Aligned_cols=55  Identities=22%  Similarity=0.337  Sum_probs=40.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHHCCCeEEecCC--CCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~--~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +++|+++.|+|++++.+..+..|.++.....  .......+++.. +|..||+++...
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            6789999999999999988888998765421  122224455554 678899998643

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=93.41  E-value=0.24  Score=36.68  Aligned_cols=57  Identities=21%  Similarity=0.275  Sum_probs=43.3

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-C------CcceEEEEECCCCCEEEEEecCC
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG-G------KLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g------~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .++.|++|.|.|++++.+..++ .|.++...... .      ..+..+++.-.+|..|+|++...
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            3778999999999999999987 79998763211 0      12234677778889999998754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=93.25  E-value=0.27  Score=36.31  Aligned_cols=54  Identities=20%  Similarity=0.412  Sum_probs=40.2

Q ss_pred             cceEEEEEeCCHHHHHHHHHHCCCeEEecCC-C-----------CCcceEEEEECCCC-CEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFERLGVEFAKKPD-G-----------GKLKGVAFIKDPDD-YWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~-~-----------g~~~~~~~~~DPdG-~~IEi~e~  234 (244)
                      ++.|+++.|.|++++.+..++.|.++..... .           ......++++-++| ..|||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            6789999999999999888889998874321 1           11234567777777 78999874

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=92.90  E-value=0.31  Score=34.85  Aligned_cols=55  Identities=20%  Similarity=0.282  Sum_probs=39.2

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+++.|.|+++..+..++ .|.++...... ......+++.. +|..+++++...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEecCC
Confidence            678999999999999999988 89987653211 11123455544 678899988643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=92.15  E-value=0.64  Score=32.48  Aligned_cols=52  Identities=29%  Similarity=0.528  Sum_probs=40.0

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+.+.|.|+++..+..++ .|.++....  +.  ...++..++|..+++.+...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~--~~--~~~~~~~~~~~~l~l~~~~~   55 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR--GN--AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE--TT--TEEEEECTTCCEEEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC--CC--cEEEEEcCCCcEEEEEeCCC
Confidence            567999999999999998887 799887643  11  24666777788899987643

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=91.92  E-value=0.54  Score=34.41  Aligned_cols=56  Identities=7%  Similarity=0.111  Sum_probs=41.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCCcceEEEEECCCC-----CEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDD-----YWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~~~~~~~~~DPdG-----~~IEi~e~~~  236 (244)
                      ++.|+.+.|.|++++.+..++ .|.++..... .......+++..+++     ..|+|++...
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            778999999999999998875 7998875431 111123567777775     7899998643

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=91.81  E-value=0.43  Score=34.05  Aligned_cols=52  Identities=25%  Similarity=0.300  Sum_probs=37.7

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEe
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e  233 (244)
                      +++|+++.|.|+++..+..++ .|.++...... ......+++... +..++|++
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-TEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-CeEEEEEe
Confidence            778999999999999999976 89998754321 111223555554 45899998

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=91.66  E-value=0.41  Score=36.33  Aligned_cols=55  Identities=20%  Similarity=0.279  Sum_probs=40.0

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|++|.|.|++++.+..++ .|.++...... ......+++.. .|..|||++...
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~~~   64 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEPLS   64 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEESS
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeECC
Confidence            789999999999999999998 89988764321 11223455554 467899998643

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=90.07  E-value=1.4  Score=32.43  Aligned_cols=53  Identities=15%  Similarity=0.254  Sum_probs=38.9

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEE-ECCCCCEEEEEecC
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFI-KDPDDYWIEIFDLK  235 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~-~DPdG~~IEi~e~~  235 (244)
                      .++.|+.|.|.|+++..+..++ .|.++......+.   ..++ .+..+..|+|.+..
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~   81 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR---WNFLWVSGRAGMVVLQEEK   81 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTT---EEEEEETTTTEEEEEEECC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCc---EEEEEecCCCcEEEEeccC
Confidence            3788999999999999999976 7999877642222   2333 34457889998863

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=89.92  E-value=0.56  Score=35.24  Aligned_cols=56  Identities=21%  Similarity=0.265  Sum_probs=39.2

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC---------------CCcceEEEEECCCCCEEEEEecCC
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG---------------GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~---------------g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .+++|+++.|.|++++.+..++ .|.++......               .....++++.. .|..|||++...
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            4789999999999999999987 89876532110               01123455544 478999998744

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=89.75  E-value=1  Score=32.68  Aligned_cols=54  Identities=17%  Similarity=0.284  Sum_probs=38.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+.+.|.|++++.+..++ .|.++.......... ..+++ . +|..|+|++...
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~-~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVL-P-GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEEC-T-TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEE-c-CCCEEEEEeCCC
Confidence            568999999999999998876 799987544222111 12344 3 788999998743

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=88.83  E-value=2.2  Score=30.38  Aligned_cols=54  Identities=17%  Similarity=0.246  Sum_probs=38.2

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCCcceEEEEECCC---CCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~~~~~~~~~DPd---G~~IEi~e~  234 (244)
                      .+.|+.+.|.|+++..+..++ .|.++..... .......+++.-++   |..|++.+.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            457999999999999999987 8999875432 11111245555444   788999874

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=88.23  E-value=1.3  Score=31.30  Aligned_cols=56  Identities=13%  Similarity=0.128  Sum_probs=40.3

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .+.|+++.|.|++++.+..++ .|.++...... ......+|+..++|..|+|++...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   60 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTD   60 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETT
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCC
Confidence            357999999999999998865 69987654211 111234566767799999998754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=88.10  E-value=1.3  Score=31.58  Aligned_cols=55  Identities=16%  Similarity=0.019  Sum_probs=38.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCC-CCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPd-G~~IEi~e~~  235 (244)
                      ++.|+.+.|.|++++.+..++ .|.++......+.....+.+..++ +..|++.+..
T Consensus        13 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           13 YVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGG
T ss_pred             ceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCc
Confidence            788999999999999999865 899987644211122334555554 4568887754

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=88.09  E-value=1  Score=31.75  Aligned_cols=53  Identities=19%  Similarity=0.154  Sum_probs=36.9

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ++.|+++.|.|+++..+..++ .|.++...... ......+++.-+++ .|+|++.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            568999999999999999987 89998754211 11112234555556 8999875

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=86.92  E-value=1.2  Score=32.45  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=37.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ++.|+.|.|.|++++.+..++.|.++......+   ..+.+.-++|..|+|.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~---~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSA---PHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGC---SEEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCC---ceEEEEcCCCeEEEEecC
Confidence            568999999999999998888898876543211   134445567888999873

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=86.41  E-value=2.7  Score=30.68  Aligned_cols=55  Identities=18%  Similarity=0.152  Sum_probs=39.2

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCC---CCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPD---DYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPd---G~~IEi~e~~  235 (244)
                      ++.|+.|.|.|+++..+..++ .|.++...... ......+++.-++   +..|+|++..
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            678999999999999999976 79998754311 1111235666554   5899998864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=85.47  E-value=4.2  Score=34.29  Aligned_cols=35  Identities=6%  Similarity=0.247  Sum_probs=31.2

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEee
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL  117 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~  117 (244)
                      .+...|.++.|.+.|++++++.|+++||++.....
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            35679999999999999999999999999987653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=84.66  E-value=2.4  Score=31.58  Aligned_cols=51  Identities=10%  Similarity=0.062  Sum_probs=38.2

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+.+.|.|++++.+..++ .|.++....  .   ..+++.-++|..++|++...
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~---~~~~~~~~~g~~l~l~~~~~   57 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESS--P---TFAMFVMKTGLRLGLWAQEE   57 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEEC--S---SEEEEECTTSCEEEEEEGGG
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccC--C---CEEEEEcCCCcEEEEecCCc
Confidence            568999999999999988877 798876543  1   23566666889999987643

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=84.40  E-value=3.4  Score=31.65  Aligned_cols=55  Identities=18%  Similarity=0.195  Sum_probs=39.2

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecCC-CCCcceEEEEECCC------------------CCEEEEEec
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD------------------DYWIEIFDL  234 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~-~g~~~~~~~~~DPd------------------G~~IEi~e~  234 (244)
                      .++.|+++.|.|+++..+..++ .|.++..... .+.....+++..++                  |..|+|++.
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            3778999999999999999987 7999875432 11111235556553                  679999875

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=83.96  E-value=2  Score=30.93  Aligned_cols=50  Identities=10%  Similarity=-0.021  Sum_probs=37.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++.|+.+.|.|+++..+..++ .|.++.....     ..+.+...+|..+.|.+..
T Consensus        13 ~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           13 TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP-----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHTCCCSEECS-----SEEEEECSTTCEEEEESSS
T ss_pred             eeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC-----CEEEEEcCCCcEEEEEeCC
Confidence            668999999999999888876 7887654321     2244555678888888764

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=83.88  E-value=2.2  Score=30.81  Aligned_cols=51  Identities=12%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             cceEEEEEeCCHHHHHHHHHHCCCeEEec-CCCCCcceEEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~-p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .+.|+.+.|.|+++..+..++.|.++... ...+.   .+++...+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~---~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGS---EVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----C---CEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCC---EEEEEeCCCeEEEEEEC
Confidence            56899999999999988887799887765 22112   24554346777888654

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=83.45  E-value=3.6  Score=31.48  Aligned_cols=54  Identities=20%  Similarity=0.163  Sum_probs=39.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCC-CCcceEEEEECCCC------------------CEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD------------------YWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~-g~~~~~~~~~DPdG------------------~~IEi~e~  234 (244)
                      .++|++|.|.|+++..+...+ .|.++...... ......+|+..+++                  ..||++..
T Consensus        34 ~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           34 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            678999999999999999964 79998764321 11223566777764                  78999764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=83.38  E-value=4.1  Score=28.71  Aligned_cols=49  Identities=18%  Similarity=0.238  Sum_probs=36.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++.|+.+.|.|++++.+..++ .|.++.....  .   .+++.- +|..+++.+..
T Consensus        10 ~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~~-~~~~~~l~~~~   59 (133)
T 3ey7_A           10 HLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA--G---RIALEF-GHQKINLHQLG   59 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T---EEEEEE-TTEEEEEEETT
T ss_pred             ccCEEEEEECCHHHHHHHHHHccCceEEEecC--C---eEEEEc-CCEEEEEEcCC
Confidence            788999999999999999987 7999887541  1   133332 46778887753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=83.28  E-value=4.2  Score=29.83  Aligned_cols=50  Identities=16%  Similarity=0.183  Sum_probs=37.3

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+.|.|.|+++..+..++ .|.++.....     ...++. -+|..|+|.+...
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-----~~~~l~-~~~~~l~l~~~~~   73 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ-----NRKALI-FGAQKINLHQQEM   73 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETT-----TEEEEE-ETTEEEEEEETTB
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC-----CeEEEE-eCCeEEEEeccCC
Confidence            778999999999999999998 8999887642     123333 2457788887543

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=82.89  E-value=3.3  Score=30.55  Aligned_cols=48  Identities=8%  Similarity=0.184  Sum_probs=36.7

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      ++.|+.|.|.|++++.+..++ .|.++....  +   ..+++.. +|..|+|++.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~---~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--P---EIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S---SEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C---CEEEEEc-CCEEEEEEec
Confidence            567999999999999999887 798876543  1   2355554 6888999875

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=82.82  E-value=3  Score=30.82  Aligned_cols=51  Identities=12%  Similarity=0.130  Sum_probs=37.5

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ++.|+.|.|.|++++.+..++ .|.++....  .   ..+++.-.+|..|+|++...
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~---~~~~~~~~~~~~l~l~~~~~   76 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS--P---TFSLFVLANGMKLGLWSRHT   76 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T---TEEEEECTTSCEEEEEETTS
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C---CeEEEEcCCCcEEEEEeCCC
Confidence            668999999999999998886 798775432  1   13455555688899987643

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=80.66  E-value=7.5  Score=28.55  Aligned_cols=49  Identities=16%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             cceEEEEEeCCHHHHHHHH----HHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          181 GFGHIGITVDDVYKACERF----ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl----~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      ++.|++|.|.|+++..+..    ...|.++......+    ..|+.  +|..|+|++..
T Consensus        20 ~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~----~~~~~--g~~~l~l~~~~   72 (146)
T 3ct8_A           20 MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG----KSYKH--GKTYLVFVQTE   72 (146)
T ss_dssp             SCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTE----EEEEE--TTEEEEEEECC
T ss_pred             ceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCC----ceEec--CCeEEEEEEcC
Confidence            6789999999999998887    45899987654221    23555  67789998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	244
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-40
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-16
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-14
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	4e-13
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-12
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-11
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	1e-09
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-08
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	8e-08
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	4e-07
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	3e-06
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	6e-06
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	8e-06
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-05
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	4e-05
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	8e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	9e-05
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-04
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.001
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	0.004

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 8e-40
 Identities = 97/168 (57%), Positives = 121/168 (72%), Gaps = 1/168 (0%)

Query: 73  PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE 132
               +  D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YE
Sbjct: 9   LSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYE 68

Query: 133 DTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDV 192
           D    P +  ++  W   + AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DV
Sbjct: 69  DKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDV 127

Query: 193 YKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 240
           Y AC+RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   +  +
Sbjct: 128 YSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATL 175

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 70.5 bits (171), Expect = 4e-16
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 27/155 (17%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                   
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY---------------GPET 50

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
           + A IELT+NWG +       Y           HI ++VD+  +ACE+  + G    ++ 
Sbjct: 51  EEAVIELTYNWGVDKYELGTAYG----------HIALSVDNAAEACEKIRQNGGNVTREA 100

Query: 211 --DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 243
               G    +AF++DPD Y IE+ + K  G+  G+
Sbjct: 101 GPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN 135

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 21/137 (15%), Positives = 31/137 (22%), Gaps = 3/137 (2%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             F   D       +S  LGM    + D                                
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSL 73

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               I+ T      S          +S   G   + I V+D   A       G   +  P
Sbjct: 74  SAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPP 133

Query: 211 -DGGKLKGVAFIKDPDD 226
               +   +A +K   D
Sbjct: 134 IVLNEAVTIAEVKLYGD 150

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 66.1 bits (160), Expect = 2e-14
 Identities = 18/154 (11%), Positives = 35/154 (22%), Gaps = 29/154 (18%)

Query: 88  MQQTMFRIKDP----KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 143
            Q    RI  P       + FY   L +  +         +     G             
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD-------- 56

Query: 144 RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 203
                        L              + +                ++     + + +G
Sbjct: 57  -----------YHLEFTQYEGGSTAPVPHPDS-----LLVFYVPNAVELAAITSKLKHMG 100

Query: 204 VEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 237
            +  +  +     G   I+DPD + I   + K I
Sbjct: 101 YQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGI 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 62.8 bits (151), Expect = 4e-13
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 28/146 (19%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
           TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY                   
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP----------------- 49

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                       T  +  +            +GHI I V+DV +      +  V    + 
Sbjct: 50  --------EMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED 101

Query: 211 DGGKLKGVAFIKDPDDYWIEIFDLKT 236
           + G +   AF+ DPD Y+IE+ + KT
Sbjct: 102 ESGFM---AFVVDPDGYYIELLNEKT 124

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 60.5 bits (145), Expect = 3e-12
 Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 11/146 (7%)

Query: 88  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 147
           M      ++    ++ F+   +G++L  R +    +++    G        A      + 
Sbjct: 10  MDNVSIVVESLDNAISFFEE-IGLNLEGRANVE-GEWAGRVTGLGSQCVEIAM-----MV 62

Query: 148 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 207
           T    + IEL+      +  D   +        G+  +  TV+D+ +   R  + G E  
Sbjct: 63  TPDGHSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELV 119

Query: 208 KKP-DGGKLKGVAFIKDPDDYWIEIF 232
            +         + +I+  +   I + 
Sbjct: 120 GEVVQYENSYRLCYIRGVEGILIGLA 145

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 57.7 bits (138), Expect = 2e-11
 Identities = 19/145 (13%), Positives = 36/145 (24%), Gaps = 19/145 (13%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             +   D   +  +Y    G   L R + PE       +                     
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM---------------APAAKL 55

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                ++        +     +   ++   G  H+   VDD+          GV+     
Sbjct: 56  TEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE 115

Query: 211 --DGGKLKGVAFI--KDPDDYWIEI 231
              G     + F+  K      IE+
Sbjct: 116 PKLGTGGNRINFMHPKSGKGVLIEL 140

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 53.7 bits (128), Expect = 1e-09
 Identities = 20/144 (13%), Positives = 35/144 (24%), Gaps = 9/144 (6%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 D   +   +S  LG  L  R D      +   L            +        
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS------GSLSFLFTAPY 70

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                  T    + S    + +   +        + + V D   A       G   A  P
Sbjct: 71  AHGADAATAALPSFSAAAARRFAADH--GLAVRAVALRVADAEDAFRASVAAGARPAFGP 128

Query: 211 -DGGKLKGVAFIKDPDDYWIEIFD 233
            D G+   +A ++   D  +    
Sbjct: 129 VDLGRGFRLAEVELYGDVVLRYVS 152

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 21/146 (14%), Positives = 35/146 (23%), Gaps = 23/146 (15%)

Query: 93  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 152
           F + + K +  +YS   GM L+                  +                   
Sbjct: 13  FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN-----------------GS 55

Query: 153 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 210
           A   LT      +        +      G   + I V D   A       G     +P  
Sbjct: 56  ARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYE 115

Query: 211 ---DGGKLKGVAFIKDPDDYWIEIFD 233
              + G +  +A I         + D
Sbjct: 116 LKDEHGTVV-LAAIATYGKTRHTLVD 140

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 48.1 bits (113), Expect = 8e-08
 Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 27/144 (18%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                K+   +  FY  VLG+  +K     +     +    + T                
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG--------------- 54

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFA 207
                         S  +                IG+ V          ERFE+  V+ +
Sbjct: 55  --------SPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHS 106

Query: 208 KKPDGGKLKGVAFIKDPDDYWIEI 231
           +         + F +D +   + +
Sbjct: 107 EMTTYANRPALQF-EDAEGLRLVL 129

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 45.7 bits (107), Expect = 4e-07
 Identities = 17/143 (11%), Positives = 36/143 (25%), Gaps = 31/143 (21%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
             F ++D +        V     +   D  +                       +   F 
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSL--------------------SREKFF 47

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
               I +    G +       +              I   D  +  ER  +LG++     
Sbjct: 48  LIGDIWVAIMQGEKLAERSYNHI----------AFKIDDADFDRYAERVGKLGLDMRPPR 97

Query: 211 DGGKLKG-VAFIKDPDDYWIEIF 232
              + +G   +  D D++  E+ 
Sbjct: 98  PRVEGEGRSIYFYDDDNHMFELH 120

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 131 YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 190
            E      AD  +     F   +   +          +F+              I I V+
Sbjct: 20  LEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGI----------IIHIEVE 69

Query: 191 DVYKACERFERLGVEFAKKPDGGKLKG-VAFIKDPDDYWIEIFDLK 235
           DV +  +R   LG++    P           ++ P    ++ + +K
Sbjct: 70  DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK 115

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 42.7 bits (100), Expect = 6e-06
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 9/105 (8%)

Query: 129 LGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT 188
           +G+   A+  +  V   ++  G+   I L  N    S   +    +G         +   
Sbjct: 30  MGFTKVATHRSKNV--HLYRQGE---INLILNNEPNSIASYFAAEHGP----SVCGMAFR 80

Query: 189 VDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 233
           V D  KA  R   LG +      G     +  IK      + + D
Sbjct: 81  VKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLID 125

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 19/142 (13%), Positives = 31/142 (21%), Gaps = 37/142 (26%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D   S+ FY  +LG  L  R                                  
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEAR---------------------------------- 33

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                              +  + G +        GI   D  +   +    GV   K+ 
Sbjct: 34  -WDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQN 92

Query: 211 DGGKLKGVAFIKDPDDYWIEIF 232
                    +  DPD + +E  
Sbjct: 93  RSEG--DSFYFLDPDGHRLEAH 112

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 38/144 (26%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
               + D + S+ F+  +LG++L  R +                                
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLT-------------------------- 41

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAK 208
                              +       +   + H   TV  +D     +R E+ GV   K
Sbjct: 42  --------CGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWK 93

Query: 209 KPDGGKLKGVAFIKDPDDYWIEIF 232
           +          +  DPD + +E+ 
Sbjct: 94  QNKSEG--ASFYFLDPDGHKLELH 115

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 40.7 bits (94), Expect = 4e-05
 Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 32/144 (22%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
            +    +   + D +++VLG  L +++          FL                     
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK---------------- 52

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                   H+      P+    H+             T +D+ +A +            P
Sbjct: 53  -------AHDVAFIHHPEKGRLHH-------VSFHLETWEDLLRAADLISMTDTSIDIGP 98

Query: 211 DGGKLKGV--AFIKDPDDYWIEIF 232
               L      +  DP     E+F
Sbjct: 99  TRHGLTHGKTIYFFDPSGNRNEVF 122

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 39.9 bits (93), Expect = 8e-05
 Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 101 SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN 160
             +FY ++      +  D       L                 + +        I L   
Sbjct: 21  WANFYEKLFNFREARYFDIKGEYTGLTS---------------KAMSAPDGMIRIPLNEE 65

Query: 161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAF 220
               +    +     N E  G  H+    DD+ K  +  +++G+ F   P     + +  
Sbjct: 66  SSKGAGQIEEFLMQFNGE--GIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEG 123

Query: 221 IKDPDDYWIE 230
                   ++
Sbjct: 124 RLPDHGEPVD 133

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.8 bits (89), Expect = 9e-05
 Identities = 20/142 (14%), Positives = 35/142 (24%), Gaps = 38/142 (26%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
                 +P  +  FY  +LGM +     +                               
Sbjct: 6   ANIATPEPARAQAFYGDILGMPVAMDHGWIVT------------------------HASP 41

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
             A  +++      S  D                + I VD+  +   R  + G+     P
Sbjct: 42  LEAHAQVSFAREGGSGTDVP-------------DLSIEVDNFDEVHARILKAGLPIEYGP 88

Query: 211 -DGGKLKGVAFIKDPDDYWIEI 231
                     F++DP    I I
Sbjct: 89  VTEAWGVQRLFLRDPFGKLINI 110

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 16/144 (11%), Positives = 31/144 (21%), Gaps = 36/144 (25%)

Query: 91  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 150
              R+ D   +L+ Y  +LG+  + R D   +                            
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYL-------------------------- 44

Query: 151 KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 210
                     W                     G   +  D + +        G    + P
Sbjct: 45  --------KAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLP 96

Query: 211 DGGKLKG--VAFIKDPDDYWIEIF 232
            G           + P  +  E++
Sbjct: 97  AGELNSCGRRVRFQAPSGHHFELY 120

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 35.7 bits (81), Expect = 0.001
 Identities = 13/141 (9%), Positives = 29/141 (20%), Gaps = 31/141 (21%)

Query: 92  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 151
           +   +D   +++F++  LG S +   D                        D        
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVED------------------------DFAGVVRDD 44

Query: 152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 211
                        +  D     N  +     G   +  +        F         +  
Sbjct: 45  -------VTLFISAVQDQVVPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIV 97

Query: 212 GGKLKGVAFIKDPDDYWIEIF 232
                    ++DP    +   
Sbjct: 98  EQPWGREFALRDPAGNCVHFV 118

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 34.2 bits (77), Expect = 0.004
 Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 14/85 (16%)

Query: 159 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV-----------EFA 207
                         H G      +    + +DD+ +   + + +G+              
Sbjct: 35  MILQRGDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPE 94

Query: 208 KKPDGGKLKGVAFIKDPDDYWIEIF 232
            +  GG    +A + DPD   + + 
Sbjct: 95  LQGWGGT---MAALVDPDGTLLRLI 116

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.93
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.87
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.85
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.84
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.82
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.82
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.8
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.78
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.78
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.77
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.77
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.75
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.75
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.74
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.74
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.73
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.73
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.72
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.7
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.67
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.64
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.62
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.59
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.55
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.37
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.18
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.13
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.13
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.11
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.11
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.75
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.74
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.31
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.02
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.62
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	94.56
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	91.24
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	90.97
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	90.71
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	89.93
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	89.21
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	87.71
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	84.34
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	83.29
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	83.07

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-25  Score=177.61  Aligned_cols=164  Identities=59%  Similarity=1.132  Sum_probs=115.6

Q ss_pred             CCCCCCCCCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEE
Q 026024           76 HTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI  155 (244)
Q Consensus        76 ~~~~~~~~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  155 (244)
                      ++.|++.+..++++|++|.|+|+++|++||+++|||++......+...+...+++.+...........+..+........
T Consensus        12 ~~~~~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (176)
T d1qipa_          12 CSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATL   91 (176)
T ss_dssp             CCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEE
T ss_pred             hcCCCCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccce
Confidence            45567778899999999999999999999999999999988776767777777765443222221112222222233333


Q ss_pred             EEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          156 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       156 eL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .+........... ...........|+.|+++.++|+++++++|+++|+++..++..+....++||+|||||+|||+|+.
T Consensus        92 ~~~~~~~~~~~~~-~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          92 ELTHNWGTEDDET-QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             EEEEETTGGGCTT-CCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             eEEEeeccccccC-cCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            3322222111000 012222223358899999999999999999999999999998777667789999999999999998


Q ss_pred             CCCCC
Q 026024          236 TIGKI  240 (244)
Q Consensus       236 ~~~~~  240 (244)
                      ++-.+
T Consensus       171 ~~~~~  175 (176)
T d1qipa_         171 KMATL  175 (176)
T ss_dssp             TGGGC
T ss_pred             CCCcc
Confidence            87654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.87  E-value=2.4e-21  Score=149.24  Aligned_cols=131  Identities=15%  Similarity=0.222  Sum_probs=92.5

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-----------CCcEEEEEeecCCCCCCCCCCccceeeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGK  151 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  151 (244)
                      ...++++|++|.|+|++++++||++ |||++..+....           +....+.++...+                 +
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~   66 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------G   66 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------S
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc-----------------c
Confidence            5679999999999999999999998 999998765321           2233444554332                 1


Q ss_pred             CcEEEEeecCCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC-CcceEEEEECCCCCEEE
Q 026024          152 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIE  230 (244)
Q Consensus       152 ~~~leL~~~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g-~~~~~~~~~DPdG~~IE  230 (244)
                      ...++|+..........   .........|+.|++|.|+|+++++++|+++|+++..++... ...+.+|++|||||+||
T Consensus        67 ~~~~~l~~~~~~~~~~~---~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iE  143 (149)
T d1ss4a_          67 HSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIG  143 (149)
T ss_dssp             SCEEEEEEEEESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEE
T ss_pred             ceEEEEEeeccccCccc---ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEE
Confidence            45666654322221110   111112234889999999999999999999999998777432 22357899999999999


Q ss_pred             EEec
Q 026024          231 IFDL  234 (244)
Q Consensus       231 i~e~  234 (244)
                      |+|+
T Consensus       144 l~e~  147 (149)
T d1ss4a_         144 LAEE  147 (149)
T ss_dssp             EEEE
T ss_pred             EEEc
Confidence            9986

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.9e-20  Score=138.98  Aligned_cols=129  Identities=39%  Similarity=0.722  Sum_probs=88.6

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+++|++|.|+|+++|++||+++|||++......+...+....+......               .....+.........
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   65 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceee---------------ecccccccccccccc
Confidence            78999999999999999999999999998877655555444444332110               012222222211111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCC--CcceEEEEECCCCCEEEEEecCCCCC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKTIGK  239 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g--~~~~~~~~~DPdG~~IEi~e~~~~~~  239 (244)
                            ..    ...+..|+++.+++++.+.++++++|+.+..++...  ....++||+|||||.|||+|.+...+
T Consensus        66 ------~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          66 ------YE----LGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             ------CC----CCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             ------cc----ccccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence                  11    123678999999999999999999999998876432  23357889999999999999876554

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=1e-20  Score=140.89  Aligned_cols=114  Identities=16%  Similarity=0.183  Sum_probs=85.4

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+|+|+.|.|+|+++|++||+++||+++....+    .+.  .+..+                   ...|.|........
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~--~~~~g-------------------~~~l~l~~~~~~~~   55 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFA--QFTIG-------------------SHCLMLSQNHLVPL   55 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEE--EEEET-------------------TEEEEEESSCSSSC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeE--EEEEc-------------------CceeeeeecccCCC
Confidence            789999999999999999999999999866532    232  23322                   45666654322111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~  235 (244)
                            ...    +.| .+++|.|+|+++++++++++|+++..+|...+++ +.+||+|||||.|||++.+
T Consensus        56 ------~~~----~~~-~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          56 ------ENF----QSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             ------CCC----CSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             ------CCC----Ccc-eEEEEEECCHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence                  111    123 4899999999999999999999999887655544 4799999999999999864

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=7.6e-20  Score=139.87  Aligned_cols=121  Identities=15%  Similarity=0.191  Sum_probs=87.8

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      .|++.|+|++++++||+++|||++..+...+. .+..++++..+.                 ...+++....+...    
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~----   69 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DYHLEFTQYEGGST----   69 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS-----------------SEEEEEEEETTCCC----
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC-----------------ceeeeccccccccc----
Confidence            56777899999999999999999987765332 355666665432                 45666665443321    


Q ss_pred             CCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCCC
Q 026024          170 KGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG  238 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~~  238 (244)
                        ..    .+.+.+|++|.|+|   +++++++|+++|+++..++......+.+||+|||||+|||++.+.+.
T Consensus        70 --~~----~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~~~  135 (137)
T d1twua_          70 --AP----VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGIS  135 (137)
T ss_dssp             --CC----CCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCCCC
T ss_pred             --cc----ccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCCCc
Confidence              11    12356799999976   78899999999999987664323335689999999999999887653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.82  E-value=2.7e-20  Score=142.22  Aligned_cols=138  Identities=15%  Similarity=0.202  Sum_probs=94.6

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++|+||+|.|+|+++|++||+++||+++......+.......+....             .+.......+++.+...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~el~~~~~   69 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA-------------AKLTEHMTQVQVMAPLN   69 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS-------------SSCCTTCCEEEEEEESS
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeece-------------eccccccchhhhhhhhc
Confidence            35689999999999999999999999999998776655444333333221             11122367888876533


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC-CCCCcc-eEEEE--ECCCCCEEEEEecC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLK-GVAFI--KDPDDYWIEIFDLK  235 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p-~~g~~~-~~~~~--~DPdG~~IEi~e~~  235 (244)
                      .......  .........|++||||.|+|+++++++|+++|++++.++ ..+..+ .++|+  +||||++|||+|..
T Consensus        70 ~~~~~~~--~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          70 DESTVAK--WLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTSHHHH--HHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             ccCcccc--cccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            3221100  000111234899999999999999999999999987543 333333 35566  79999999999964

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=3.6e-19  Score=140.18  Aligned_cols=119  Identities=14%  Similarity=0.215  Sum_probs=86.4

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++++||+|.|+|++++++||+++|||++..+...+.......++.....                 .....+...  . 
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--~-   62 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHH--P-   62 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEEC--S-
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc-----------------ccccccccc--C-
Confidence            58999999999999999999999999999887765555544444443221                 122222111  1 


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCCHH---HHHHHHHHCCCeEEecCCC-CC-cceEEEEECCCCCEEEEEecCC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdDvd---~~~~rl~~~Gv~v~~~p~~-g~-~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                                   .+.+.+|++|.+.+++   +++++|++.|+++...+.. +. ....+||+|||||.|||+....
T Consensus        63 -------------~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          63 -------------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             -------------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence                         1136789999998655   7889999999998876643 22 2357999999999999998644

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=2.3e-19  Score=137.80  Aligned_cols=127  Identities=14%  Similarity=0.116  Sum_probs=86.8

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      .-+|+||+|.|+|++++++||+++|||++..+....+ ......+++.....               ....+.+......
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~~   68 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGS---------------PGTELSFFEIPLV   68 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCC---------------TTSEEEEEECTTC
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccc---------------eeeEEeecccccc
Confidence            3569999999999999999999999999987754332 22333334432210               1344555432211


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..      ...   ...+++|++|.|+|   ++++.++|++.|+.+.... .......+||+|||||.|||++...
T Consensus        69 ~~------~~~---~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          69 GR------TYR---GTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMT-TYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             CB------CBC---CBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSE-EETTEEEEEEECTTCCEEEEEECTT
T ss_pred             cC------Ccc---CCCceeEEEEecCCchhHHHHhhhhhccceeeeCcc-ccCCeEEEEEECCCCCEEEEEEeCC
Confidence            11      111   12368999999998   7788999999999874433 2233457899999999999999755

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.80  E-value=1.3e-19  Score=133.24  Aligned_cols=108  Identities=14%  Similarity=0.199  Sum_probs=80.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      |+|+||.|.|+|++++++||+++|||++..+..   ..+  +++..++                  +..+.+....... 
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~------------------~~~~~~~~~~~~~-   57 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDND------------------GFILTLMKGKEVQ-   57 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTT------------------CCEEEEEECSSCC-
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Ccc--eeeeecc------------------eeeeeeeeeeccc-
Confidence            789999999999999999999999999987643   222  3333221                  4566665432111 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEE
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  232 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~  232 (244)
                                   ..+..|++|.|+|   +++++++++++|+++...+..  .++.+|++|||||.|||.
T Consensus        58 -------------~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          58 -------------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA--HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -------------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEEC---CEEEEEEETTTEEEEEE
T ss_pred             -------------ccccceeeeeeccccchhhhhhhHHHcCCccccCCCC--ceEEEEEECCCCCEEEEE
Confidence                         1256799999986   778999999999997665532  245689999999999985

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=1.1e-17  Score=125.64  Aligned_cols=122  Identities=37%  Similarity=0.661  Sum_probs=85.0

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      -||+||+|.|+|+++|++||+++|||++..+...+...+...........               ...............
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccc---------------cccccccccccCccc
Confidence            37999999999999999999999999998877655444433333322110               011111111111111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                            ...    ..+..++++.++++++.++++...++++...+..   ...+||+|||||+|||++..
T Consensus        67 ------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          67 ------YKH----DEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES---GFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             ------CCC----CSSEEEEEEEESCHHHHHHHHHHTTCCEEEECSS---SSEEEEECTTSCEEEEEEHH
T ss_pred             ------ccC----CCccceeeeehhhHHHHHHHHHHcCCceeeCCCC---cEEEEEECCCCCEEEEEECC
Confidence                  111    1266789999999999999999999998877632   24689999999999999964

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.78  E-value=1.8e-18  Score=130.33  Aligned_cols=117  Identities=15%  Similarity=0.166  Sum_probs=81.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC-cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .+|+|++|.|+|++++++||+++|||++....+.... .....++..                   ....+++.......
T Consensus         3 ~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~   63 (130)
T d1r9ca_           3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLI-------------------GDIWVAIMQGEKLA   63 (130)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEE-------------------TTEEEEEEECCCCS
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEec-------------------CCEEEeeccccccc
Confidence            4799999999999999999999999999877543321 111222222                   13455554321110


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeC--CHHHHHHHHHHCCCeEEecCCC-CCcceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~Vd--Dvd~~~~rl~~~Gv~v~~~p~~-g~~~~~~~~~DPdG~~IEi~e~~  235 (244)
                                    ..+..|++|.|+  |+++++++++++|+++..++.. ...++.+||+|||||+|||....
T Consensus        64 --------------~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          64 --------------ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             --------------SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             --------------ccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence                          125579999885  7999999999999998766532 33345789999999999998753

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=4.3e-18  Score=135.14  Aligned_cols=118  Identities=11%  Similarity=0.067  Sum_probs=81.4

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      ...|+||.|.|+|++++++||+++|||+++.+.+    .+..+++..+..                 ...+.+.......
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~-----------------~~~~~~~~~~~~~   68 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA-----------------FGEIVVKYLDGPT   68 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS-----------------TTCEEEEECCSSB
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc-----------------ceEEEeccccccc
Confidence            4579999999999999999999999999988742    233333322211                 2333332221111


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .          .....+++||+|.|+|   +++++++++++|+++.... +..+.+.+||+|||||+|||+..
T Consensus        69 ~----------~~~~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~-~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          69 E----------KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGII-DRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             C----------BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCE-ECSSEEEEEEECTTCCEEEEEEE
T ss_pred             c----------ccCccccceEEEEeCChHHHHHHHHHHHhcCCCccccc-cCCCEEEEEEECCCCcEEEEEEC
Confidence            1          1112378899999975   8889999999999875333 23334568999999999999874

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.77  E-value=1.2e-18  Score=132.34  Aligned_cols=109  Identities=14%  Similarity=0.197  Sum_probs=81.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      -.|+||+|.|+|++++++||+++|||++..+..  +    ..++..++.                 ++.+.+...  .. 
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~l~~~--~~-   56 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQG--EV-   56 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--TT-
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC--c----ceEEeecCC-----------------ceEEEEecC--CC-
Confidence            469999999999999999999999999987642  1    234444331                 455666431  11 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCC----CCcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~----g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                    .++.|++|.|.   |+++++++|+++|+++...+..    ....+.+||+|||||.|||+..
T Consensus        57 --------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          57 --------------DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             --------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             --------------CCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence                          26789999995   5788999999999999876632    1223578999999999999853

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.77  E-value=8.8e-18  Score=129.70  Aligned_cols=114  Identities=18%  Similarity=0.230  Sum_probs=83.5

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ...++|+||.|.|+|++++++||+++|||++..+..    .+ ..+.+.+..                ....+.+...  
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~-~~~~~~~~~----------------~~~~~~~~~~--   68 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NT-IYLRSLEEF----------------IHHNLVLRQG--   68 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SE-EEEECTTCC----------------SSCSEEEEEC--
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cc-eeeeccccc----------------ccceeecccc--
Confidence            457999999999999999999999999999987632    12 233322211                0233333221  


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCCCc--ceEEEEECCCCCEEEEEec
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g~~--~~~~~~~DPdG~~IEi~e~  234 (244)
                      .               ..+++|++|.+.   |+++++++|+++|+++...+.....  +..+||+|||||.|||+..
T Consensus        69 ~---------------~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          69 P---------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             S---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             C---------------CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            1               126789999996   6899999999999999876643322  3478999999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.75  E-value=2.1e-17  Score=126.20  Aligned_cols=113  Identities=20%  Similarity=0.290  Sum_probs=79.8

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      ..|+||+|.|+|++++++||+++|||++..+..    ..  .++..+                   ...+.+........
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~   57 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TG--AYLTCG-------------------DLWVCLSYDEARQY   57 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TE--EEEEET-------------------TEEEEEEECTTCCC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cc--cccccc-------------------cccceeeccccccc
Confidence            579999999999999999999999999987642    12  222221                   12233322221111


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEe--CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~V--dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .+    .     ...+..|++|.+  +|+++++++|+++|+++...+..  .++.+||+|||||.|||...
T Consensus        58 ~~----~-----~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~~--~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          58 VP----P-----QESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CC----G-----GGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEEC
T ss_pred             CC----C-----cCCccceeeeechHHHHHHHHHHHHHCCCeEeecCCC--CceEEEEECCCCCEEEEEEC
Confidence            00    0     112557888888  58999999999999999877643  34568999999999999764

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.75  E-value=1.3e-17  Score=127.88  Aligned_cols=117  Identities=18%  Similarity=0.311  Sum_probs=80.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ++.|+|+||.|.|+|++++++||+++|||++..+..  ...+  ........                ....+.+...  
T Consensus         3 ~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--~~~~--~~~~~~~~----------------~~~~~~~~~~--   60 (145)
T d1mpya1           3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGRV--YLKAWTEV----------------DKFSLVLREA--   60 (145)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSCE--EEECTTCC----------------BSCSEEEEEC--
T ss_pred             cCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--cCcc--ceeccccc----------------ceeecccccc--
Confidence            357999999999999999999999999999887643  2222  11111110                1233334221  


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEe---CCHHHHHHHHHHCCCeEEecCCCC-C-cceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGG-K-LKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~V---dDvd~~~~rl~~~Gv~v~~~p~~g-~-~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ..               .+..|+++.+   +|+++++++|+++|+++...+... + .+..+||+|||||.|||+....
T Consensus        61 ~~---------------~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          61 DE---------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             SS---------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             Cc---------------ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            10               1445777766   479999999999999987766432 2 2357999999999999997533

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=4.2e-18  Score=129.56  Aligned_cols=109  Identities=17%  Similarity=0.252  Sum_probs=82.1

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      .+|+||+|.|+|++++++||+++|||++..+..  +    ..++..++.                 ++.+.+...  .. 
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~~~~~--~~-   56 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQR-----------------AWRIAVQPG--EL-   56 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--TT-
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecccc--c----eeeeeeeec-----------------ceeeeeecc--CC-
Confidence            579999999999999999999999999987642  1    234544331                 344555321  11 


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeC---CHHHHHHHHHHCCCeEEecCCCC----CcceEEEEECCCCCEEEEEec
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~Vd---Dvd~~~~rl~~~Gv~v~~~p~~g----~~~~~~~~~DPdG~~IEi~e~  234 (244)
                                    .++.|++|.|+   |++++.++++++|+++...+...    ...+.+||+|||||.|||+..
T Consensus        57 --------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          57 --------------DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             --------------CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             --------------CCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence                          26789999995   68889999999999998766321    123468999999999999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=6.4e-18  Score=132.38  Aligned_cols=119  Identities=19%  Similarity=0.163  Sum_probs=83.0

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC---CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEee
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  159 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~  159 (244)
                      |+...|+|++|.|+|++++++||+++|||++......+   +......++..+..                 ++.+.+..
T Consensus         6 ~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~h~~a~~~   68 (156)
T d1kw3b2           6 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA   68 (156)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             CCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc-----------------cceeeecc
Confidence            78889999999999999999999999999987654321   22233445544321                 44455432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCC-EEEEEec
Q 026024          160 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDY-WIEIFDL  234 (244)
Q Consensus       160 ~~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~-~IEi~e~  234 (244)
                      ..                .+.+++|++|+|+|   +.+++++|+++|+.+..+...+.. ..++|++||||| .+|+.-.
T Consensus        69 ~~----------------~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          69 FP----------------IPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             CS----------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             CC----------------CCCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            11                11378999999975   566789999999875443332222 347999999998 5898664

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=2.3e-17  Score=131.61  Aligned_cols=116  Identities=16%  Similarity=0.217  Sum_probs=84.5

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  164 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~  164 (244)
                      .++|+||+|.|+|++++++|| ++|||++..+...+.+....+|+..+..                 ++.+.+.....  
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~~~--   62 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGGNG--   62 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEESSB--
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc-----------------ccceecccccC--
Confidence            479999999999999999999 7899999887766655555666665432                 45566543210  


Q ss_pred             CCCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeE--EecCC-CCCc-ceEEEEECCCCCEEEEEecC
Q 026024          165 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF--AKKPD-GGKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       165 ~~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v--~~~p~-~g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                                     .+++|++|.+.+   +++++++|+++|+..  ...|. .+.. ..++||+|||||+|||+...
T Consensus        63 ---------------~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          63 ---------------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             ---------------SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ---------------CCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence                           277899999985   556678999999854  33332 2222 23689999999999998754

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=6.2e-18  Score=123.40  Aligned_cols=106  Identities=17%  Similarity=0.221  Sum_probs=74.9

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  169 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~  169 (244)
                      ++.|.|+|++++++||+++|||++....+    .+. .+...+                   .....+.... ...    
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~-~~~~~~-------------------~~~~~~~~~~-~~~----   55 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIV-THASPL-------------------EAHAQVSFAR-EGG----   55 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEE-EEEEEE-------------------EEEEEEEEES-SSB----
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----cee-Eecccc-------------------ccceeeeccc-ccC----
Confidence            68899999999999999999999887632    232 222211                   1111221111 110    


Q ss_pred             CCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          170 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       170 ~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                        .      ..+..|++|.|+|+++++++++++|+++..+|...+++ +.+|++|||||+|||+
T Consensus        56 --~------~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          56 --S------GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             --T------TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             --C------CCceeEEEEEecCHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence              0      01345999999999999999999999998877554443 5789999999999996

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.6e-18  Score=132.14  Aligned_cols=135  Identities=12%  Similarity=0.078  Sum_probs=94.1

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC--cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      ..-++++||+|.|+|+++|++||+++|||+++.....+..  ....+.+..+                   ...++|...
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~   67 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG-------------------KIVFVLCSA   67 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC-------------------cEEEEEEec
Confidence            3457899999999999999999999999999877653322  2222333321                   456677554


Q ss_pred             CCCCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC---CCcc-eEEEEECCCCCEEEEEecCC
Q 026024          161 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKLK-GVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       161 ~~~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~---g~~~-~~~~~~DPdG~~IEi~e~~~  236 (244)
                      ......+... +.  ...+.|++||||.|+|+++++++|+++|++++.+|..   +... .+++++.|+|..+||+|+..
T Consensus        68 ~~~~~~~~~~-~~--~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          68 LNPWNKEMGD-HL--VKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             SSTTCHHHHH-HH--HHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             cCCCCchhhh-hh--hhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            3322111000 00  0012488999999999999999999999999988742   2211 36788999899999999987


Q ss_pred             CCC
Q 026024          237 IGK  239 (244)
Q Consensus       237 ~~~  239 (244)
                      .+.
T Consensus       145 ~~g  147 (149)
T d1sqia1         145 YTG  147 (149)
T ss_dssp             CCS
T ss_pred             CcC
Confidence            654

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.73  E-value=7e-17  Score=122.28  Aligned_cols=109  Identities=18%  Similarity=0.245  Sum_probs=77.1

Q ss_pred             eEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 026024           86 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  165 (244)
Q Consensus        86 ~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~  165 (244)
                      -+|+||+|.|+|++++++||+++||+++..+.+  .  ..  ++..+                   ...+..........
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~~--~~~~~-------------------~~~~~~~~~~~~~~   57 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--GA--YLELG-------------------SLWLCLSREPQYGG   57 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--EE--EEEET-------------------TEEEEEEECTTCCC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc--c--ee--eeecC-------------------CeEEEEeeeccccc
Confidence            469999999999999999999999999987743  1  21  22211                   23444433221110


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEe--CCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~V--dDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                                  ...+..|++|.+  +|+++++++|+++|+++...+..  .++.+||+|||||.|||..
T Consensus        58 ------------~~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~--~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          58 ------------PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             ------------CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS--SSCEEEEECTTCCEEEEES
T ss_pred             ------------cccccccchhccccchHHHHHHHHHHCCCcCccCCCc--ceeEEEEECCCCCEEEEEE
Confidence                        011445666666  59999999999999998776532  2456899999999999976

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.73  E-value=4e-18  Score=128.29  Aligned_cols=121  Identities=19%  Similarity=0.222  Sum_probs=79.7

Q ss_pred             EEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCC-C
Q 026024           87 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-S  165 (244)
Q Consensus        87 ~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~-~  165 (244)
                      ||+|++|.|+|++++++||++ |||.+......+  .+.....+  +                  ...+.+....... .
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~~~~~~~--~------------------~~~~~~~~~~~~~~~   58 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PHTEAVLD--G------------------GIRLAWDTVETVRSY   58 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SEEEEECG--G------------------GCEEEEEEHHHHHHH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cceeeecc--c------------------eeeeeeccccccccc
Confidence            689999999999999999976 899876654322  22111111  1                  2334432211000 0


Q ss_pred             CCCCCCCCCCCCCCCcceEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEEEEecC
Q 026024          166 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       166 ~~~~~~~~~g~~~p~g~~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .+.   .  ....+.+..|++|.|+|   +++++++++++|+++..++....+ .+.+||+|||||+|||+++-
T Consensus        59 ~~~---~--~~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          59 DPE---W--QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             CTT---C--CCCCSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCC---C--CCCccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            000   0  01111245699999986   777899999999999988865444 35789999999999999863

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.72  E-value=3.3e-18  Score=134.49  Aligned_cols=135  Identities=17%  Similarity=0.092  Sum_probs=93.8

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC--CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ..+++||+|.|+|+++|++||+++|||+++.....+.  .....+.+..+                   ...++|.....
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-------------------~~~i~l~~~~~   65 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIK   65 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-------------------CEEEEEeccCC
Confidence            5789999999999999999999999999987654332  22333444332                   46677765432


Q ss_pred             CCCCC--CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCC---CCc-ceEEEEECCCCCEEEEEecCC
Q 026024          163 TESDP--DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL-KGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       163 ~~~~~--~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~---g~~-~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      .....  ...++..  ..+.|+.||||.|+|+++++++|+++|+++..+|..   +.+ ...+++++|+|..++|+|+..
T Consensus        66 ~~~~~~~~~~~~~~--~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          66 PATPWGHFLADHVA--EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             CCSHHHHHHHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCccccccchhhh--cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            21100  0000000  011388999999999999999999999999987742   211 236899999999999999866


Q ss_pred             CCCC
Q 026024          237 IGKI  240 (244)
Q Consensus       237 ~~~~  240 (244)
                      .+..
T Consensus       144 ~~g~  147 (163)
T d1t47a1         144 YDGP  147 (163)
T ss_dssp             ECSS
T ss_pred             CCCc
Confidence            5544

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=1.1e-16  Score=126.09  Aligned_cols=137  Identities=16%  Similarity=0.071  Sum_probs=89.1

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCc--EEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      ...+++||+|.|+|++++++||+++|||+++.+...+...  .....++.+                   ...+.+....
T Consensus         9 ~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~v~~~~~   69 (167)
T d1sqda1           9 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPY   69 (167)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEEC
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC-------------------CeeEEEeccc
Confidence            3468999999999999999999999999998876533221  222222221                   1222222111


Q ss_pred             CCCCCCC-----CCCCCCCC----------CCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCC-cceEEEEECCC
Q 026024          162 GTESDPD-----FKGYHNGN----------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPD  225 (244)
Q Consensus       162 ~~~~~~~-----~~~~~~g~----------~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~-~~~~~~~~DPd  225 (244)
                      .......     ........          ....|+.||||.|+|+++++++|+++|+++..+|.... ..++++++++.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~g  149 (167)
T d1sqda1          70 SPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYG  149 (167)
T ss_dssp             CGGGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEET
T ss_pred             cccccccccccccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccC
Confidence            1000000     00000000          00138999999999999999999999999999885533 23578999999


Q ss_pred             CCEEEEEecCCCCC
Q 026024          226 DYWIEIFDLKTIGK  239 (244)
Q Consensus       226 G~~IEi~e~~~~~~  239 (244)
                      +..++|++++...+
T Consensus       150 d~~~~~v~r~~~~~  163 (167)
T d1sqda1         150 DVVLRYVSYKAEDT  163 (167)
T ss_dssp             TEEEEEEEECCC--
T ss_pred             CcEEEEEecCCCcc
Confidence            99999999976544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.67  E-value=2.6e-16  Score=124.75  Aligned_cols=137  Identities=13%  Similarity=0.040  Sum_probs=91.3

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCC--cEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      -+.++++||+|.|+|++++++||+++|||+++.+......  .+....++.+                   ...+.+...
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~   69 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAP   69 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEE
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC-------------------CeeeEEeec
Confidence            4568999999999999999999999999999877654322  2222233321                   233333221


Q ss_pred             CCCCCCCC--CCCCCCC-------CCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCc-ceEEEEECCCCCEEE
Q 026024          161 WGTESDPD--FKGYHNG-------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIE  230 (244)
Q Consensus       161 ~~~~~~~~--~~~~~~g-------~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~-~~~~~~~DPdG~~IE  230 (244)
                      ........  ..+....       ...+.|+.||||+|+|+++++++|+++|+++..+|..... .++++++.|.+.+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~  149 (172)
T d1sp8a1          70 YAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLR  149 (172)
T ss_dssp             CCSSCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEE
T ss_pred             cCCCchhhhcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEE
Confidence            11110000  0000000       0012488999999999999999999999999998854322 357889999888899


Q ss_pred             EEecCCCC
Q 026024          231 IFDLKTIG  238 (244)
Q Consensus       231 i~e~~~~~  238 (244)
                      |+|+..-.
T Consensus       150 lve~~~~~  157 (172)
T d1sp8a1         150 YVSYPDGA  157 (172)
T ss_dssp             EEECCTTG
T ss_pred             EEecCCCC
Confidence            99987643

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.64  E-value=2e-15  Score=111.95  Aligned_cols=105  Identities=17%  Similarity=0.289  Sum_probs=72.6

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCC
Q 026024           92 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  171 (244)
Q Consensus        92 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~~  171 (244)
                      .|.|+|+++|++||++ |||++.....    .+.....+                     ...+.+........      
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~---------------------~~~~~~~~~~~~~~------   54 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG---------------------DLMLEFFAHPGLDP------   54 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET---------------------TEEEEEEECTTCCG------
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc---------------------eecccccccccccc------
Confidence            4999999999999987 9999987532    22222111                     34445543322111      


Q ss_pred             CCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEec-------CCCCCc-ceEEEEECCCCCEEEEEecC
Q 026024          172 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-------PDGGKL-KGVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       172 ~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~-------p~~g~~-~~~~~~~DPdG~~IEi~e~~  235 (244)
                      .       ....++++.|+|+++++++++++|+++...       +....+ .+.+||+|||||+|||+|.+
T Consensus        55 ~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          55 L-------ASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             G-------GCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             C-------CCCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            0       123589999999999999999998887543       322223 35789999999999999964

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.62  E-value=2.6e-15  Score=111.12  Aligned_cols=105  Identities=11%  Similarity=0.023  Sum_probs=74.2

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  170 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~~~~  170 (244)
                      ..|.|+|+++|++||+++|||++..+.+    .+  .++..+                   +..+.+.......      
T Consensus         9 pvL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~~~~~------   57 (122)
T d1jifa_           9 PVLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG-------------------DIRLHISRTEHQI------   57 (122)
T ss_dssp             EEEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCHH------
T ss_pred             EEEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee-------------------eeeeeeecccccc------
Confidence            3599999999999999999999887632    22  223221                   4566665432111      


Q ss_pred             CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC--------CCCCcceEEEEECCCCCEEEEEec
Q 026024          171 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP--------DGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       171 ~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p--------~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                              +....++.+.++|+++++++++++++.....+        ....+++.+|++|||||+|||...
T Consensus        58 --------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          58 --------VADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             --------HHTTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             --------ccceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence                    01335899999999999999999987664332        122334679999999999999864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.59  E-value=2.3e-14  Score=105.22  Aligned_cols=107  Identities=10%  Similarity=0.067  Sum_probs=73.6

Q ss_pred             EEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 026024           88 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  167 (244)
Q Consensus        88 l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~~~~~  167 (244)
                      -.+..|.|+|+++|++||+++|||++..+..    .+.....+                     ...+.+.......   
T Consensus         5 ~~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~---------------------~~~l~~~~~~~~~---   56 (120)
T d1xrka_           5 SAVPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD---------------------DVTLFISAVQDQV---   56 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET---------------------TEEEEEEECSCTT---
T ss_pred             eEEEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc---------------------cceeecccccccc---
Confidence            3456699999999999999999999987642    22222221                     3455554322111   


Q ss_pred             CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeE--------EecCCCCCcceEEEEECCCCCEEEEEe
Q 026024          168 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF--------AKKPDGGKLKGVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       168 ~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v--------~~~p~~g~~~~~~~~~DPdG~~IEi~e  233 (244)
                                 +.+..++.+.+++++..++++.+.+.+.        ..++.+..+++.+||+|||||.|||+.
T Consensus        57 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          57 -----------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             -----------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             -----------CCCCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence                       1244689999999999998888665443        334434445568999999999999986

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=2e-14  Score=108.79  Aligned_cols=118  Identities=9%  Similarity=-0.025  Sum_probs=73.4

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcE-------EEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           90 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-------SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        90 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      ++.|.|.|+++|++||+++||++++.+...+++..       ....+..                   ++..+.+.....
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~-------------------~~~~~~~~~~~~   70 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNL-------------------AGSSFVVCDVSS   70 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEE-------------------TTEEEEEEEGGG
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEE-------------------CCeeeecccccc
Confidence            45667779999999999999999887654332211       0111111                   123333332211


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEe
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  233 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e  233 (244)
                      .....  .+..     .....+|++.|+|+++++.+++++|++++.++...+++ +.++|+||+||.|+|.|
T Consensus        71 ~~~~~--~~~~-----~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          71 LPGFS--TAKS-----EGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             STTCC--CCCT-----TSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             ccccc--cCCC-----CCcceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            11000  0011     11235999999999999999999999999988665444 57899999999999976

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.37  E-value=4e-13  Score=104.12  Aligned_cols=124  Identities=15%  Similarity=0.052  Sum_probs=84.0

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      +...++||.+.|+|++++.+||++ |||+.+.+...  ..  +..++.                     ..+.++.+...
T Consensus         6 g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~--~~--~~l~~~---------------------G~i~ll~~~~~   59 (150)
T d1cjxa1           6 GLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS--KN--VHLYRQ---------------------GEINLILNNEP   59 (150)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS--SS--EEEEEE---------------------TTEEEEEECCS
T ss_pred             ccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc--eE--EEEEec---------------------CcEEEEecCCC
Confidence            456899999999999999999976 99999877532  22  222221                     12333332221


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      .. + ...+...  .+.|++||+|+|+|+++++++++++|++++..+.......+..+++|+|.+|.|+++..-
T Consensus        60 ~s-~-~~~~~~~--hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          60 NS-I-ASYFAAE--HGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             SS-H-HHHHHHH--HSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             CC-H-hHhHHhh--CCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCCC
Confidence            11 0 0001000  124899999999999999999999999988766332222357789999999999998653

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.18  E-value=2.1e-11  Score=98.73  Aligned_cols=105  Identities=17%  Similarity=0.294  Sum_probs=69.2

Q ss_pred             ceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeCCCCcEEE--EEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           85 GYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSL--YFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        85 ~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      -.+++||++.|+  |+++++.||+++|||+.....+.++....+  ..+...+                 ....+.+...
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~-----------------~~~~~~l~~~   65 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-----------------GMIRIPLNEE   65 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-----------------SSCEEEEEEE
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc-----------------cccceecccC
Confidence            357999999998  999999999999999998776543332222  2222211                 1334444333


Q ss_pred             CCCCCCC--CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          161 WGTESDP--DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       161 ~~~~~~~--~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      .......  .+.....|    .|++||||.|+|+.+++++|+++|++++..|
T Consensus        66 ~~~~~sqi~~fl~~~~g----~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          66 SSKGAGQIEEFLMQFNG----EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             CTTCCSHHHHHHHHHTS----SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCccHHHHHHHhcCC----CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            2211100  00001112    3899999999999999999999999998765

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.7e-10  Score=93.70  Aligned_cols=107  Identities=14%  Similarity=0.275  Sum_probs=67.1

Q ss_pred             CCceEEEEEEEEcCC--HHHHHHHHHhccCCEEEEeeeCCC-----CcEEEEEeecCCCCCCCCCCccceeeecCCCcEE
Q 026024           83 TNGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI  155 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  155 (244)
                      .+-.+++||++.|++  +++++.||+++|||+.....+..+     .......+...+                 +...+
T Consensus        20 ~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~-----------------~~i~~   82 (210)
T d1sqia2          20 CNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIKM   82 (210)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT-----------------SCCEE
T ss_pred             CCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC-----------------ccccc
Confidence            445679999999998  999999999999999775432111     111112222111                 23455


Q ss_pred             EEeecCCCCCCC---CCCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          156 ELTHNWGTESDP---DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       156 eL~~~~~~~~~~---~~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      .|..........   .+.....|    .|++||||.|+|+.++.++|+++|+++...|
T Consensus        83 ~lne~~~~~~~sqi~~fl~~~~G----~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2          83 PINEPAPGRKKSQIQEYVDYNGG----AGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             EEEECC-----CHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             cccccCCCCcccHHHHHHhhcCC----CCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            554321111100   00001122    3899999999999999999999999999777

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.13  E-value=1e-10  Score=94.22  Aligned_cols=105  Identities=13%  Similarity=0.239  Sum_probs=67.6

Q ss_pred             ceEEEEEEEEcC--CHHHHHHHHHhccCCEEEEeeeC-----CCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE
Q 026024           85 GYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDF-----PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (244)
Q Consensus        85 ~~~l~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL  157 (244)
                      -..++||++.|+  ++++++.||+++|||+.......     +.......-+...+                 ....+.+
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~-----------------~~v~l~l   66 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKFPI   66 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEEEE
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc-----------------cccceee
Confidence            357999999998  99999999999999998765321     12222222222111                 1344444


Q ss_pred             eecCCCCCCCC---CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCCCeEEecC
Q 026024          158 THNWGTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  210 (244)
Q Consensus       158 ~~~~~~~~~~~---~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~Gv~v~~~p  210 (244)
                      ...........   +-....|    .|++||||.|+|+.++.++|+++|++++..|
T Consensus        67 ne~~~~~~~s~i~~FL~~~~g----~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          67 NEPALAKKKSQIDEYLEFYGG----AGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             EEECCSSSCCHHHHHHHHHTS----CEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             cccCccccccchhhhhhhcCC----CcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            32211110000   0001111    3899999999999999999999999999888

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.11  E-value=3.2e-09  Score=79.80  Aligned_cols=129  Identities=12%  Similarity=-0.010  Sum_probs=74.9

Q ss_pred             eEEEEEEEEcC-CHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceee--ecCCCcEEEEeecCC
Q 026024           86 YFMQQTMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW--TFGKPATIELTHNWG  162 (244)
Q Consensus        86 ~~l~Hv~L~V~-Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~leL~~~~~  162 (244)
                      |+| ...|... |.++|++||+++||+++.......+........         .........  ....+..+.+... .
T Consensus         2 ~~i-~pyl~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~---------~~~~~~i~ha~l~i~g~~~~~~d~-~   70 (137)
T d1u6la_           2 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIP---------ADWKDKIMHARLVVGSFALMASDN-H   70 (137)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----C---------CSSCCCEEEEEEEETTEEEEEEEC-C
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCC---------CCCCCeEEEEEEEEcCeEEEeccc-C
Confidence            444 2334555 999999999999999998776544322111100         000000000  0001222322211 1


Q ss_pred             CCCCCCCCCCCCCCCCCCcceEEEEEeCCHH--HHHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEecC
Q 026024          163 TESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  235 (244)
Q Consensus       163 ~~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd--~~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~~  235 (244)
                      ...     +...     .+..++++.+++.|  +.+.++.++|++++.++.+.+++ +.++|+||+|+.|+|...+
T Consensus        71 ~~~-----~~~~-----~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          71 PAY-----PYEG-----IKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             TTS-----CCCC-----CCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             Ccc-----cccC-----CCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEecC
Confidence            110     0111     13358899988654  55777788999999999776766 4688999999999997653

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.11  E-value=1e-10  Score=96.05  Aligned_cols=110  Identities=11%  Similarity=0.199  Sum_probs=67.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCC-----CCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL  157 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL  157 (244)
                      .+-.+++||++.|+|++++++||+++|||+...+....     ........+...+                 +...+.+
T Consensus         5 ~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~-----------------g~v~~~l   67 (224)
T d1sp8a2           5 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPL   67 (224)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEE
T ss_pred             CCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC-----------------Cccceee
Confidence            45578999999999999999999999999988765322     1222222332211                 2455666


Q ss_pred             eecCCCCCCCC-CCCCCCCCCCCCcceEEEEEeCCHHHHHHHHHHCC----CeEEecC
Q 026024          158 THNWGTESDPD-FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKP  210 (244)
Q Consensus       158 ~~~~~~~~~~~-~~~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~G----v~v~~~p  210 (244)
                      .+...+..... ...+-. .....|++||||.|+|+++++++|+++|    +++...|
T Consensus        68 ~E~~~~~~~~s~i~~FL~-~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          68 NEPVHGTKRRSQIQTFLD-HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             EEECCCSSSCCHHHHHHH-HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             eeecCCCCCccHHHHHHH-hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            54322211000 000000 0011389999999999999999999875    5555544

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.75  E-value=2.9e-08  Score=81.30  Aligned_cols=103  Identities=9%  Similarity=0.234  Sum_probs=64.0

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCC-----CcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEe
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT  158 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~  158 (244)
                      +-.+|+||++.|+|++++.+||+++||+.........+     .......+...                 .+...+.+.
T Consensus        19 gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~-----------------~g~v~~~l~   81 (230)
T d1sqda2          19 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN-----------------DEMVLLPIN   81 (230)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT-----------------TSCSEEEEE
T ss_pred             CcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCC-----------------CcccceeEE
Confidence            45679999999999999999999999998877653221     11111112211                 124566665


Q ss_pred             ecCCCCCC-CCCC---CCCCCCCCCCcceEEEEEeCCHHHHHHHHHHC----CCeEE
Q 026024          159 HNWGTESD-PDFK---GYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFA  207 (244)
Q Consensus       159 ~~~~~~~~-~~~~---~~~~g~~~p~g~~hi~f~VdDvd~~~~rl~~~----Gv~v~  207 (244)
                      +....... ....   ....|    .|.+||||.|+|+.++.++|+++    |+++.
T Consensus        82 E~~~~~~~~sqi~~FL~~~~G----~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          82 EPVHGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             EECCC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             eecCCCCCcchHHHHHhhccC----CceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            43222110 0000   01122    38999999999999999999986    55554

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.74  E-value=4e-07  Score=68.06  Aligned_cols=112  Identities=8%  Similarity=0.051  Sum_probs=66.4

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEEEeee-C------CCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           91 TMFRIKDPKVSLDFYSRVLGMSLLKRLD-F------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        91 v~L~V~Dle~a~~FY~~vLG~~~~~~~~-~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      +.+.-.|.++|++||+++||.+.+.+.. .      +.+.....-|..                   .+..+.+......
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i-------------------~~~~i~~~d~~~~   70 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRL-------------------GDQSVHCIDSHVR   70 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEE-------------------TTEEEEEEEESSC
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEE-------------------CCEEEEEecCCCC
Confidence            3444458999999999999987655431 1      111221122221                   1334444322111


Q ss_pred             CCCCCCCCCCCCCCCCCcceEEEEEeCCHHHH--HHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEE
Q 026024          164 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA--CERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  232 (244)
Q Consensus       164 ~~~~~~~~~~~g~~~p~g~~hi~f~VdDvd~~--~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~  232 (244)
                      ..      ...+     +...+++.+++.|..  +.+..+.|.+++.++.+..++ +...++||+|+.|.|.
T Consensus        71 ~~------~~~~-----~~~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          71 HA------FDFT-----PAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CS------CCCC-----TTEEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             CC------CCCC-----CceEEEEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            10      1111     235788888865443  455557788999888766555 4678999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.31  E-value=8.5e-06  Score=60.20  Aligned_cols=50  Identities=10%  Similarity=-0.012  Sum_probs=36.7

Q ss_pred             EEEEEeCCHHH---HHHHHHHCCCeEEecCCCCCcc-eEEEEECCCCCEEEEEec
Q 026024          184 HIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       184 hi~f~VdDvd~---~~~rl~~~Gv~v~~~p~~g~~~-~~~~~~DPdG~~IEi~e~  234 (244)
                      ++++.+++.++   ++++| +.|.+++.++.+..++ ....++||.|+.|.|..+
T Consensus        75 s~~v~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          75 SLFVTVKDTIEMERLFNGL-KDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CEEEECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEeccCCHHHHHHHHHHh-ccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            67888887665   44555 4566888887665554 356799999999999764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.02  E-value=0.02  Score=42.79  Aligned_cols=43  Identities=12%  Similarity=-0.001  Sum_probs=31.9

Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEEecCCCCCcceEEEEECCCCCEEEEEec
Q 026024          183 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       183 ~hi~f~VdD---vd~~~~rl~~~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~  234 (244)
                      .+|.+.++|   +++++++|.+.| ++..+     .+   .++|+.|..|.|+.+
T Consensus        74 ~sl~l~~d~~eE~d~~f~~LsegG-~~~~~-----~G---~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          74 FSFQVATDDQAETDRLWNAIVDNG-GEESA-----CG---WCRDKWGISWQITPR  119 (156)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTT-CEECS-----TT---EEECTTSCEEEEEEH
T ss_pred             eEEEEecCCHHHHHHHHHHHhccC-CCCCC-----Ce---EEECCCCCEEEeChH
Confidence            489999986   666788887766 33332     22   589999999999976

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.62  E-value=0.082  Score=37.58  Aligned_cols=59  Identities=17%  Similarity=0.218  Sum_probs=41.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeec
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  160 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~  160 (244)
                      .....++|+++.|.|+++..+..++ .|.++........+.+...|+...+                  +..|||++.
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPd------------------G~~iEl~e~  147 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVE------------------GILIGLAEE  147 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGG------------------GCEEEEEEE
T ss_pred             CCCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCC------------------CCEEEEEEc
Confidence            3456799999999999999999976 8998865432223344455665433                  678898764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=94.56  E-value=0.091  Score=35.51  Aligned_cols=53  Identities=26%  Similarity=0.494  Sum_probs=42.3

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEECCCCCEEEEEecCCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  237 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~DPdG~~IEi~e~~~~  237 (244)
                      |++||.+.|+|+++..+..++ .|.++......    ..+|+.++++..+.+.+....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   56 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN----AFAVMRDNDGFILTLMKGKEV   56 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT----TEEEEECTTCCEEEEEECSSC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC----cceeeeecceeeeeeeeeecc
Confidence            678999999999999988887 79998765522    246778888999999886543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.24  E-value=0.38  Score=35.00  Aligned_cols=60  Identities=5%  Similarity=-0.026  Sum_probs=41.0

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  163 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~~  163 (244)
                      +..+.|++|.|.|++++.+...+ .|.+.+.....-.+.....++..-                  ++..++|++..+.
T Consensus       102 ~~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~------------------gd~~~~~v~r~~~  161 (167)
T d1sqda1         102 GLGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLY------------------GDVVLRYVSYKAE  161 (167)
T ss_dssp             CSEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEE------------------TTEEEEEEEECCC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEcc------------------CCcEEEEEecCCC
Confidence            35799999999999999999976 799887664322333444443321                  1567788876543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.26  Score=35.20  Aligned_cols=53  Identities=15%  Similarity=0.152  Sum_probs=35.0

Q ss_pred             cceEEEEEeCCHHHHHHHHH-HCCCeEEecCC--CCCcce-EEEEECCCCCEEEEEec
Q 026024          181 GFGHIGITVDDVYKACERFE-RLGVEFAKKPD--GGKLKG-VAFIKDPDDYWIEIFDL  234 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~-~~Gv~v~~~p~--~g~~~~-~~~~~DPdG~~IEi~e~  234 (244)
                      +++||+|.|.|++++.+... ..|.+......  .+.... .+.+.+ ++..+++.+.
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   67 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-GKIVFVLCSA   67 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-TTEEEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-CcEEEEEEec
Confidence            78999999999999999886 47999875432  122222 233443 3456666654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=90.71  E-value=0.4  Score=34.78  Aligned_cols=56  Identities=9%  Similarity=0.245  Sum_probs=38.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCC--CCCcceEEEEECCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~--~g~~~~~~~~~DPdG~~IEi~e~~~  236 (244)
                      +++|++|.|.|++++.+..++ .|.++.....  .+......++..-.+..++|.+...
T Consensus         7 ~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~   65 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK   65 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESS
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCC
Confidence            789999999999999999986 7998875331  1222222333334566688877543

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=89.93  E-value=0.45  Score=33.21  Aligned_cols=48  Identities=23%  Similarity=0.342  Sum_probs=34.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcceEEEEE-CCCCCEEEEEe
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIK-DPDDYWIEIFD  233 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~~~~~~~-DPdG~~IEi~e  233 (244)
                      ++.||+|.|+|++++.+..++ .|.++......     .++++ |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~-----~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN-----GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT-----EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc-----ceEEeecCCceEEEEec
Confidence            678999999999999999998 69998875521     23443 33344555544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=89.21  E-value=0.57  Score=34.38  Aligned_cols=59  Identities=10%  Similarity=-0.024  Sum_probs=41.0

Q ss_pred             ceEEEEEEEEcCCHHHHHHHHHhccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 026024           85 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  162 (244)
Q Consensus        85 ~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~~  162 (244)
                      +..+.|++|.|.|++++.+-.++ .|.++........+...+.++...                  ++..++|++..+
T Consensus        97 g~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~------------------g~~~~~lve~~~  155 (172)
T d1sp8a1          97 GLAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELY------------------GDVVLRYVSYPD  155 (172)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEE------------------TTEEEEEEECCT
T ss_pred             CCceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECC------------------CCcEEEEEecCC
Confidence            46899999999999999999965 899887664322233445554421                  146788887644

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=87.71  E-value=1.1  Score=30.89  Aligned_cols=56  Identities=7%  Similarity=0.119  Sum_probs=37.4

Q ss_pred             cceEEEEEeCCHHHHHHHHHH-CCCeEEecCCCCCcc-eEEEEE-----CCCCCEEEEEecCC
Q 026024          181 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIK-----DPDDYWIEIFDLKT  236 (244)
Q Consensus       181 g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p~~g~~~-~~~~~~-----DPdG~~IEi~e~~~  236 (244)
                      +++||++.|+|++++.+..++ .|.+..........+ ...+..     ...+..+|+++...
T Consensus         7 ~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~   69 (145)
T d1jc4a_           7 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   69 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             EEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhc
Confidence            789999999999999998887 688876543222211 122222     24466888888643

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=84.34  E-value=6.1  Score=29.49  Aligned_cols=32  Identities=6%  Similarity=-0.030  Sum_probs=27.8

Q ss_pred             CCceEEEEEEEEcCCHHHHHHHHHhccCCEEE
Q 026024           83 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLL  114 (244)
Q Consensus        83 ~~~~~l~Hv~L~V~Dle~a~~FY~~vLG~~~~  114 (244)
                      -..+.++|++|+|.+.+.+.+|-+..+-+...
T Consensus        39 l~~~~~DHialR~n~~~~A~~w~~~l~~~G~l   70 (190)
T d1k4na_          39 ITPLTADHISLRCHQNATAERWRRGFEQCGEL   70 (190)
T ss_dssp             CTTCEEEEEEEECSCHHHHHHHHHHHTTTEEE
T ss_pred             chhccCcEEEEeeCCHHHHHHHHHHHHHhchh
Confidence            34689999999999999999999999877544

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=83.29  E-value=1.1  Score=32.70  Aligned_cols=31  Identities=19%  Similarity=0.392  Sum_probs=27.6

Q ss_pred             CcceEEEEEeCCHHHHHHHHHH-CCCeEEecC
Q 026024          180 RGFGHIGITVDDVYKACERFER-LGVEFAKKP  210 (244)
Q Consensus       180 ~g~~hi~f~VdDvd~~~~rl~~-~Gv~v~~~p  210 (244)
                      .|++||+|.|.|+++..+..++ .|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            4899999999999999999998 799988765

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=83.07  E-value=1.6  Score=30.33  Aligned_cols=59  Identities=5%  Similarity=-0.025  Sum_probs=35.1

Q ss_pred             CceEEEEEEEEcCCHHHHHHHHHh--ccCCEEEEeeeCCCCcEEEEEeecCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 026024           84 NGYFMQQTMFRIKDPKVSLDFYSR--VLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  161 (244)
Q Consensus        84 ~~~~l~Hv~L~V~Dle~a~~FY~~--vLG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~leL~~~~  161 (244)
                      +.-.++|+++.|.|.+.-.+|+..  -.|..+....... +.. ..|+...+                  +..|||+...
T Consensus        74 ~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~-~~~-~~yf~DPd------------------G~~iEl~~~~  133 (144)
T d1zswa1          74 GTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYA-NRP-ALQFEDAE------------------GLRLVLLVSN  133 (144)
T ss_dssp             CBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEET-TEE-EEEEECTT------------------CCEEEEEECT
T ss_pred             CCCceeEEEEecCCchhHHHHhhhhhccceeeeCccccC-CeE-EEEEECCC------------------CCEEEEEEeC
Confidence            345689999999996655555433  4677664433322 222 34444333                  6899998654


Q ss_pred             C
Q 026024          162 G  162 (244)
Q Consensus       162 ~  162 (244)
                      +
T Consensus       134 ~  134 (144)
T d1zswa1         134 G  134 (144)
T ss_dssp             T
T ss_pred             C
Confidence            3