Citrus Sinensis ID: 026033

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MSEGAMAVVKPEMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYARKRKELKEREKLKNVEVEEEHVDERSVDDLLSFINGGNGGIYEKYSSFFSASLTVFPMHQVFNSVLVDLT
cccccccccccccccEEEEEEccccEEEccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccEEEEccccccccHHHHHHHHHHcccc
*************KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKL***********IRLLNRLY**************************SVDDLLSFINGGNGGIYEKYSSFFSASLTVFPMHQVFNSVLVDLT
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MSEGAMAVVKPEMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLxxxxxxxxxxxxxxxxxxxxxEVEEEHVDERSVDDLLSFINGGNGGIYEKYSSFFSASLTVFPMHQVFNSVLVDLT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
SKP1-like protein 21 Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.probableQ8LF97

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2P1M, chain A
Confidence level:very confident
Coverage over the Query: 31-41,58-74,106-150
View the alignment between query and template
View the model in PyMOL