Citrus Sinensis ID: 026039


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPARPAKKKKKN
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEcccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHHHHHHcccccccccccccccc
*GPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF***************
xxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxx
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MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAIVFVFVFIFNIIGDALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPAQAAGAVGGALAIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGVLTFLITFAVLVIMLKGPQSNILKTWLVAVATVVLIVTGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVFPPPAPARPAKKKKKN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Aquaporin SIP1-1 Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.probableQ5VR89
Probable aquaporin SIP1-2 Water channel required to facilitate the transport of water across cell membrane.probableQ9FK43
Aquaporin SIP1-2 Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.probableQ9ATM2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IYZ, chain A
Confidence level:very confident
Coverage over the Query: 2-230
View the alignment between query and template
View the model in PyMOL