Citrus Sinensis ID: 026072

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
ccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHcccccccccc
cccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHccccccccccc
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLvtsstpateltVEERNLLSVAYKNVIGSLRAAWRIISSIEQkeegrkneeHVSLVKDYRSKVESELSDVCGSILKLldshlvpsatagesKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDialtdlapthpirlgLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
mgtptreqyVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSieqkeegrkneehvslVKDYRSKVESELSDVCGSILKLLdshlvpsatageskvfYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
********YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI*************************ELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT**********
****TRE*YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII*****************LVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAI*********SYKDSTLIMQLLRDNLTLW***********
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ***********SLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
*****REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS*********
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MGTPTREQYVYxxxxxxxxxxxxxxxxxxxxxVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQIDEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query244 2.2.26 [Sep-21-2011]
P48348248 14-3-3-like protein GF14 yes no 0.991 0.975 0.857 1e-122
P48349248 14-3-3-like protein GF14 no no 0.995 0.979 0.857 1e-121
O49996249 14-3-3-like protein D OS= N/A no 0.995 0.975 0.856 1e-120
P93206249 14-3-3 protein 1 OS=Solan N/A no 0.995 0.975 0.848 1e-119
P93207252 14-3-3 protein 10 OS=Sola N/A no 0.983 0.952 0.847 1e-117
Q96451247 14-3-3-like protein B (Fr yes no 0.979 0.967 0.834 1e-116
Q6ZKC0256 14-3-3-like protein GF14- yes no 0.959 0.914 0.785 1e-106
Q9SP07259 14-3-3-like protein OS=Li N/A no 0.967 0.911 0.775 1e-106
P93208254 14-3-3 protein 2 OS=Solan N/A no 0.954 0.917 0.789 1e-105
O65352259 14-3-3-like protein OS=He N/A no 0.991 0.934 0.755 1e-105
>sp|P48348|14338_ARATH 14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2 Back     alignment and function desciption
 Score =  439 bits (1128), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/245 (85%), Positives = 230/245 (93%), Gaps = 3/245 (1%)

Query: 3   TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
           T +R+QYVY+AKLAEQAERYEEMV+FM+ LV+ +TPA ELTVEERNLLSVAYKNVIGSLR
Sbjct: 4   TLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLR 63

Query: 63  AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
           AAWRI+SSIEQKEE RKNEEHVSLVKDYRSKVE+ELS +C  IL+LLDSHL+PSATA ES
Sbjct: 64  AAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASES 123

Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
           KVFYLKMKGDY+RYLAEFK GDERK AAE+TM++YKAAQD+A+ DLAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNF 183

Query: 183 SVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 239
           SVFYYEILNSSEKAC+MAKQ   EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE
Sbjct: 184 SVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 243

Query: 240 QIDEA 244
           Q+DEA
Sbjct: 244 QMDEA 248
Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
Arabidopsis thaliana (taxid: 3702)
>sp|P48349|14336_ARATH 14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1 Back     alignment and function description
>sp|O49996|1433D_TOBAC 14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P93206|14331_SOLLC 14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2 Back     alignment and function description
>sp|P93207|14310_SOLLC 14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2 Back     alignment and function description
>sp|Q96451|1433B_SOYBN 14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKC0|14333_ORYSJ 14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1 Back     alignment and function description
>sp|Q9SP07|1433_LILLO 14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1 Back     alignment and function description
>sp|P93208|14332_SOLLC 14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2 Back     alignment and function description
>sp|O65352|1433_HELAN 14-3-3-like protein OS=Helianthus annuus PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
297797573248 hypothetical protein ARALYDRAFT_496774 [ 0.991 0.975 0.861 1e-121
30698122248 14-3-3-like protein GF14 kappa [Arabidop 0.991 0.975 0.857 1e-121
309952069248 14-3-3-like protein GF14 Lambda [Eutrema 0.995 0.979 0.861 1e-121
302122826252 14-3-3f protein [Gossypium hirsutum] 0.979 0.948 0.880 1e-120
18416277248 14-3-3-like protein GF14 lambda [Arabido 0.995 0.979 0.857 1e-119
297811151248 hypothetical protein ARALYDRAFT_909000 [ 0.995 0.979 0.853 1e-119
17352487248 GF14 Kappa isoform [Arabidopsis thaliana 0.991 0.975 0.844 1e-118
3912949249 RecName: Full=14-3-3-like protein D gi|2 0.995 0.975 0.856 1e-118
255545912254 14-3-3 protein, putative [Ricinus commun 0.979 0.940 0.863 1e-118
224081971254 predicted protein [Populus trichocarpa] 0.979 0.940 0.863 1e-118
>gi|297797573|ref|XP_002866671.1| hypothetical protein ARALYDRAFT_496774 [Arabidopsis lyrata subsp. lyrata] gi|297312506|gb|EFH42930.1| hypothetical protein ARALYDRAFT_496774 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/245 (86%), Positives = 229/245 (93%), Gaps = 3/245 (1%)

Query: 3   TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
           T  R+QYVY+AKLAEQAERYEEMV+FM+ LV+ +TPA ELTVEERNLLSVAYKNVIGSLR
Sbjct: 4   TLNRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLR 63

Query: 63  AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
           AAWRI+SSIEQKEE RKNEEHVSLVKDYRSKVESELS +C  IL+LLDSHL+PSATA ES
Sbjct: 64  AAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVESELSSICSGILRLLDSHLIPSATASES 123

Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
           KVFYLKMKGDY+RYLAEFK GDERK AAE+TM++YKAAQD+A+ DLAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNF 183

Query: 183 SVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 239
           SVFYYEILNSSEKAC+MAKQ   EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE
Sbjct: 184 SVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 243

Query: 240 QIDEA 244
           Q+DEA
Sbjct: 244 QMDEA 248

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|30698122|ref|NP_851274.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] gi|12643286|sp|P48348.2|14338_ARATH RecName: Full=14-3-3-like protein GF14 kappa; AltName: Full=General regulatory factor 8 gi|5802794|gb|AAD51783.1|AF145300_1 14-3-3 protein GF14 kappa [Arabidopsis thaliana] gi|15293125|gb|AAK93673.1| putative 14-3-3 protein GF14kappa grf8 [Arabidopsis thaliana] gi|19310701|gb|AAL85081.1| putative 14-3-3 protein GF14kappa [Arabidopsis thaliana] gi|21537301|gb|AAM61642.1| 14-3-3 protein GF14kappa (grf8) [Arabidopsis thaliana] gi|332010669|gb|AED98052.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|309952069|gb|ADO95308.1| 14-3-3-like protein GF14 Lambda [Eutrema salsugineum] Back     alignment and taxonomy information
>gi|302122826|gb|ADK93079.1| 14-3-3f protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|18416277|ref|NP_568229.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] gi|1345595|sp|P48349.1|14336_ARATH RecName: Full=14-3-3-like protein GF14 lambda; AltName: Full=14-3-3-like protein AFT1; AltName: Full=14-3-3-like protein RCI2; AltName: Full=General regulatory factor 6 gi|5802790|gb|AAD51781.1|AF145298_1 14-3-3 protein GF14 lambda [Arabidopsis thaliana] gi|953221|gb|AAA74737.1| 14-3-3-like protein 1 [Arabidopsis thaliana] gi|1549404|gb|AAB08482.1| GF14 lambda [Arabidopsis thaliana] gi|15450385|gb|AAK96486.1| AT5g10450/F12B17_200 [Arabidopsis thaliana] gi|16974483|gb|AAL31245.1| AT5g10450/F12B17_200 [Arabidopsis thaliana] gi|332004158|gb|AED91541.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297811151|ref|XP_002873459.1| hypothetical protein ARALYDRAFT_909000 [Arabidopsis lyrata subsp. lyrata] gi|297319296|gb|EFH49718.1| hypothetical protein ARALYDRAFT_909000 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|17352487|gb|AAA79700.2| GF14 Kappa isoform [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3912949|sp|O49996.1|1433D_TOBAC RecName: Full=14-3-3-like protein D gi|2689477|gb|AAC49893.1| 14-3-3 isoform d [Nicotiana tabacum] gi|42491260|dbj|BAD10942.1| 14-3-3 protein [Nicotiana tabacum] gi|44917145|dbj|BAD12173.1| 14-3-3 d-1 protein [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|255545912|ref|XP_002514016.1| 14-3-3 protein, putative [Ricinus communis] gi|223547102|gb|EEF48599.1| 14-3-3 protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224081971|ref|XP_002306545.1| predicted protein [Populus trichocarpa] gi|118481637|gb|ABK92760.1| unknown [Populus trichocarpa] gi|222855994|gb|EEE93541.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
TAIR|locus:2122323318 GRF1 "AT4G09000" [Arabidopsis 0.971 0.745 0.755 4.3e-93
TAIR|locus:2076904265 GRF7 "AT3G02520" [Arabidopsis 0.963 0.886 0.753 2.4e-92
TAIR|locus:2146147268 GRF5 "AT5G16050" [Arabidopsis 0.963 0.876 0.744 3.9e-92
TAIR|locus:2032060259 GRF2 "general regulatory facto 0.971 0.915 0.743 3.9e-92
UNIPROTKB|Q06967260 GF14F "14-3-3-like protein GF1 0.959 0.9 0.768 1e-91
TAIR|locus:2177386255 GRF3 "general regulatory facto 0.975 0.933 0.728 9.3e-91
FB|FBgn0020238262 14-3-3epsilon "14-3-3epsilon" 0.959 0.893 0.692 5.6e-84
DICTYBASE|DDB_G0269138252 fttB "14-3-3-like protein" [Di 0.942 0.912 0.694 9.1e-84
ZFIN|ZDB-GENE-030131-779255 ywhae1 "tyrosine 3-monooxygena 0.963 0.921 0.688 1.9e-83
SGD|S000002506273 BMH2 "14-3-3 protein, minor is 0.967 0.864 0.687 2.8e-82
TAIR|locus:2122323 GRF1 "AT4G09000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 185/245 (75%), Positives = 214/245 (87%)

Query:     1 MGTP----TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56
             M TP     R+++VY+AKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKN
Sbjct:     1 MATPGASSARDEFVYMAKLAEQAERYEEMVEFMEK-VAKAVDKDELTVEERNLLSVAYKN 59

Query:    57 VIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPS 116
             VIG+ RA+WRIISSIEQKEE R N++HVSL++DYRSK+E+ELSD+C  ILKLLD+ LVP+
Sbjct:    60 VIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPA 119

Query:   117 ATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRL 176
             A +G+SKVFYLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA ++LAPTHPIRL
Sbjct:   120 AASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRL 179

Query:   177 GLALNFSVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLW 233
             GLALNFSVFYYEILNS ++AC +AKQ   EAIAELDTLGEESYKDSTLIMQLLRDNLTLW
Sbjct:   180 GLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLW 239

Query:   234 TSDMQ 238
             TSDMQ
Sbjct:   240 TSDMQ 244
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0009507 "chloroplast" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2076904 GRF7 "AT3G02520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146147 GRF5 "AT5G16050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032060 GRF2 "general regulatory factor 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q06967 GF14F "14-3-3-like protein GF14-F" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2177386 GRF3 "general regulatory factor 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0020238 14-3-3epsilon "14-3-3epsilon" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269138 fttB "14-3-3-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-779 ywhae1 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
SGD|S000002506 BMH2 "14-3-3 protein, minor isoform" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q964511433B_SOYBNNo assigned EC number0.83470.97950.9676yesno
Q964501433A_SOYBNNo assigned EC number0.73750.96720.9182nono
P426531433A_VICFANo assigned EC number0.77080.96310.9003N/Ano
P4265214334_SOLLCNo assigned EC number0.72950.98360.9230N/Ano
P921771433E_DROMENo assigned EC number0.69290.95900.8931yesno
O653521433_HELANNo assigned EC number0.75510.99180.9343N/Ano
Q4141814331_SOLTUNo assigned EC number0.75840.94260.8880N/Ano
Q434701433B_HORVUNo assigned EC number0.75100.97540.9083N/Ano
Q4364314332_SOLTUNo assigned EC number0.73140.96720.9291N/Ano
P4910614331_MAIZENo assigned EC number0.77310.95900.8965N/Ano
Q9630014337_ARATHNo assigned EC number0.74680.97130.8943nono
Q6EUP414335_ORYSJNo assigned EC number0.76890.95900.8931nono
P34730BMH2_YEASTNo assigned EC number0.69450.95080.8498yesno
P529081433_CHLRENo assigned EC number0.75100.95490.8996N/Ano
P622621433E_SHEEPNo assigned EC number0.69060.94260.9019N/Ano
P622601433E_RATNo assigned EC number0.69060.94260.9019yesno
P9321114336_SOLLCNo assigned EC number0.76440.97540.9224N/Ano
Q0696714336_ORYSJNo assigned EC number0.76890.95900.9nono
P932591433_MESCRNo assigned EC number0.75730.96310.8901N/Ano
P4264414333_ARATHNo assigned EC number0.73220.96310.9215nono
P4264514335_ARATHNo assigned EC number0.74470.96310.8768nono
P4264314331_ARATHNo assigned EC number0.74590.98360.8988nono
P546321433_DICDINo assigned EC number0.69190.94670.9166yesno
Q2R2W214334_ORYSJNo assigned EC number0.74790.96720.8905nono
Q7XTE814332_ORYSJNo assigned EC number0.76030.97540.9083nono
P933431433C_TOBACNo assigned EC number0.77080.96310.9038N/Ano
P933421433A_TOBACNo assigned EC number0.74380.96720.9254N/Ano
P9378414335_SOLTUNo assigned EC number0.76440.97540.9224N/Ano
Q9SP071433_LILLONo assigned EC number0.7750.96720.9111N/Ano
Q84J5514331_ORYSJNo assigned EC number0.71600.97540.9015nono
P4834914336_ARATHNo assigned EC number0.85770.99590.9798nono
P4834814338_ARATHNo assigned EC number0.85710.99180.9758yesno
P462661433_PEANo assigned EC number0.75830.96310.9038N/Ano
P622591433E_MOUSENo assigned EC number0.69060.94260.9019yesno
Q0152514332_ARATHNo assigned EC number0.75100.95490.8996nono
Q0152614332_MAIZENo assigned EC number0.77310.95900.8965N/Ano
O499981433F_TOBACNo assigned EC number0.74680.97540.9224N/Ano
P9321014335_SOLLCNo assigned EC number0.73550.97130.9294N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.78570.95900.9140yesno
O499961433D_TOBACNo assigned EC number0.8560.99590.9759N/Ano
O499971433E_TOBACNo assigned EC number0.76150.96310.8639N/Ano
O499951433B_TOBACNo assigned EC number0.77630.95900.9176N/Ano
P9320814332_SOLLCNo assigned EC number0.78900.95490.9173N/Ano
P9320914333_SOLLCNo assigned EC number0.75830.96310.9038N/Ano
P4607714334_ARATHNo assigned EC number0.75510.97130.8876nono
P622581433E_HUMANNo assigned EC number0.69060.94260.9019yesno
P9320614331_SOLLCNo assigned EC number0.8480.99590.9759N/Ano
P9320714310_SOLLCNo assigned EC number0.84770.98360.9523N/Ano
P293051433A_HORVUNo assigned EC number0.76150.96310.8969N/Ano
P293071433_OENEHNo assigned EC number0.76370.95490.8961N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__2590__AT5G65430.1
annotation not avaliable (248 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-144
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-135
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-131
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-121
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-118
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 1e-118
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 1e-113
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 1e-96
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 4e-94
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 2e-92
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 5e-87
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 1e-82
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 3e-82
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information 
 Score =  402 bits (1035), Expect = e-144
 Identities = 171/237 (72%), Positives = 196/237 (82%), Gaps = 6/237 (2%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE+ VYLAKLAEQAERY++MV+ M  +V       EL+VEERNLLSVAYKNVIG+ RA+W
Sbjct: 1   REELVYLAKLAEQAERYDDMVEAMKKVVELKE---ELSVEERNLLSVAYKNVIGARRASW 57

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISSIEQKEE + NE+ V L+K+YR KVE EL ++C  IL+LLD HL+P A++ ESKVF
Sbjct: 58  RIISSIEQKEESKGNEKKVKLIKEYRKKVEEELINICNDILELLDKHLIPKASSPESKVF 117

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           YLKMKGDYYRYLAEF  GDERK AA+  + +YKAA +IA  +L PTHPIRLGLALNFSVF
Sbjct: 118 YLKMKGDYYRYLAEFASGDERKEAADKALEAYKAALEIAEKELPPTHPIRLGLALNFSVF 177

Query: 186 YYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 239
           YYEILNS EKAC +AKQ   EAIAELDTL EESYKDSTLIMQLLRDNLTLWTSD +E
Sbjct: 178 YYEILNSPEKACELAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDEEE 234

Length = 236
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 244
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 95.41
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 94.71
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 90.76
PF1286294 Apc5: Anaphase-promoting complex subunit 5 89.93
PF04781111 DUF627: Protein of unknown function (DUF627); Inte 86.08
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 81.8
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-91  Score=584.54  Aligned_cols=235  Identities=71%  Similarity=1.089  Sum_probs=228.4

Q ss_pred             CCCCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhhhccCc
Q 026072            1 MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN   80 (244)
Q Consensus         1 ~~~~~re~~i~~Aklaeq~ery~Dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~r~l~~ie~k~~~~~~   80 (244)
                      |.+ .||+.+|+|+|++||+||+||++-||.++.  .+ .+|+.+|||||||||||+||+||+|||++++++||++++++
T Consensus         1 Ms~-~rE~svylAkLaeqAERYe~MvenMk~vas--~~-~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~   76 (268)
T COG5040           1 MST-SREDSVYLAKLAEQAERYEEMVENMKLVAS--SG-QELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGN   76 (268)
T ss_pred             CCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cc-chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCC
Confidence            554 599999999999999999999999999997  54 99999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccchhhhhhccchhHHHHHHHHHHHHHHH
Q 026072           81 EEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA  160 (244)
Q Consensus        81 ~~~~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A  160 (244)
                      ..++.+|+.|+++|++||..||++|+.+|+++|||.+++.|++|||+|||||||||+|||..|+.++++.+.+.++|+.|
T Consensus        77 ~~qv~lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~A  156 (268)
T COG5040          77 THQVELIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAA  156 (268)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCchhHHHHhHHHHHHHHHhCCHHHHHHHHHH---HHHHhhhhcCCcchHhHHHHHHHHHhhHhhhhhcc
Q 026072          161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM  237 (244)
Q Consensus       161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yEi~~~~~~A~~iak~---~Ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e~  237 (244)
                      .++|...||||||||||||||||||||||+|++++||.+||+   +||++||+|+|++|+|+|+||||||||||+|+++.
T Consensus       157 seiA~teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLSEEsYkDSTLIMQLLRDNLTLWTSd~  236 (268)
T COG5040         157 SEIATTELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDA  236 (268)
T ss_pred             HHHhhccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhhhhhhcchHHHHHHHHhcceeeeccc
Confidence            999999999999999999999999999999999999999999   99999999999999999999999999999999875


Q ss_pred             cc
Q 026072          238 QE  239 (244)
Q Consensus       238 ~~  239 (244)
                      +.
T Consensus       237 e~  238 (268)
T COG5040         237 EY  238 (268)
T ss_pred             cc
Confidence            43

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
3axy_C240 Structure Of Florigen Activation Complex Consisting 1e-107
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 1e-105
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 1e-105
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 1e-104
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 1e-103
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 2e-90
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 8e-90
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 2e-89
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 2e-82
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 2e-80
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 7e-80
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 7e-80
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 8e-80
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 8e-80
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 2e-79
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 6e-79
2o02_A230 Phosphorylation Independent Interactions Between 14 1e-78
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 7e-78
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 2e-76
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 2e-76
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 8e-76
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 1e-75
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 1e-75
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 3e-75
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 4e-75
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 7e-75
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 7e-75
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 8e-75
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 8e-75
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 8e-75
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 8e-75
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 1e-74
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 4e-74
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 7e-74
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 1e-71
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 2e-13
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure 
Iteration: 1

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/239 (78%), Positives = 213/239 (89%), Gaps = 4/239 (1%)
Query: 1   MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
           +G+ +RE+ VY+AKLAEQAERYEEMV++M+  V  +    ELTVEERNLLSVAYKNVIG+
Sbjct: 3   LGSMSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGA 61
Query: 61  LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
            RA+WRI+SSIEQKEEGR NEEHV+L+K+YR K+E+ELS +C  ILKLLDSHLVPS+TA 
Sbjct: 62  RRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAA 121
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
           ESKVFYLKMKGDY+RYLAEFK G ERK AAE+TM++YKAAQDIAL DLAPTHPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLAL 181
Query: 181 NFSVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
           NFSVFYYEILNS +KAC +AKQ   EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 182 NFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
2npm_A260 14-3-3 domain containing protein; cell regulator p 6e-99
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 2e-94
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 3e-94
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 1e-93
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 1e-93
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 3e-93
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 3e-93
2o8p_A227 14-3-3 domain containing protein; signaling protei 7e-84
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
 Score =  288 bits (737), Expect = 6e-99
 Identities = 145/234 (61%), Positives = 181/234 (77%), Gaps = 4/234 (1%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE  VY+AKLAEQAERY+EM K+M  +V +   + ELTVEERNLLSVAYKN +GS R++W
Sbjct: 28  RESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSW 87

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISS+EQKE  R  E+   +   YRSKVE+EL+D+C  IL +LD HL+P+AT+ +SKVF
Sbjct: 88  RIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVF 147

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           Y KMKGDY+RY++EF  GD ++++AE+ + +YK A  +A  DL PTHPIRLGLALNFSVF
Sbjct: 148 YFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVF 206

Query: 186 YYEILNSSEKACTMAKQE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
           +YEILN    A  MAK+    AI +LD L E+ YKDSTLIMQLLRDNLTLWT+D
Sbjct: 207 HYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 95.45
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 94.97
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 94.83
3qww_A433 SET and MYND domain-containing protein 2; methyltr 94.72
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 93.51
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 93.06
3u3w_A293 Transcriptional activator PLCR protein; ternary co 92.66
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 92.51
3qww_A433 SET and MYND domain-containing protein 2; methyltr 91.61
3q15_A378 PSP28, response regulator aspartate phosphatase H; 90.54
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 90.18
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 89.9
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 89.34
3ulq_A383 Response regulator aspartate phosphatase F; tetrat 89.13
3q15_A 378 PSP28, response regulator aspartate phosphatase H; 88.57
3u4t_A272 TPR repeat-containing protein; structural genomics 87.61
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 87.51
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 85.71
2pl2_A217 Hypothetical conserved protein TTC0263; TPR, prote 85.14
3u3w_A293 Transcriptional activator PLCR protein; ternary co 84.88
4g1t_A472 Interferon-induced protein with tetratricopeptide 83.8
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 83.45
4abn_A 474 Tetratricopeptide repeat protein 5; P53 cofactor, 82.56
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 82.03
4i17_A228 Hypothetical protein; TPR repeats protein, structu 81.64
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-94  Score=632.98  Aligned_cols=236  Identities=58%  Similarity=0.918  Sum_probs=220.5

Q ss_pred             CCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhhhccCchh
Q 026072            3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE   82 (244)
Q Consensus         3 ~~~re~~i~~Aklaeq~ery~Dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~r~l~~ie~k~~~~~~~~   82 (244)
                      |.+|++++|+||||+||||||||+.+||++++  .+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus         1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~~-~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~   77 (248)
T 3uzd_A            1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--LN-EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK   77 (248)
T ss_dssp             -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred             CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence            35799999999999999999999999999998  75 9999999999999999999999999999999999998888888


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chHhHHhhhccccchhhhhhccchhHHHHHHHHHHHHHHH
Q 026072           83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA  160 (244)
Q Consensus        83 ~~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A  160 (244)
                      +++.++.||++|++||..+|++|+++||++|||.++++  +++|||+|||||||||+|||..|++|+.++++|+++|++|
T Consensus        78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A  157 (248)
T 3uzd_A           78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA  157 (248)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCchhHHHHhHHHHHHHHHhCCHHHHHHHHHH---HHHHhhhhcCCcchHhHHHHHHHHHhhHhhhhhcc
Q 026072          161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM  237 (244)
Q Consensus       161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yEi~~~~~~A~~iak~---~Ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e~  237 (244)
                      +++|+++||||||+|||||||||||||||+|+|++||.+||+   +||+++|+++|++|+|+|+||||||||||+|+++.
T Consensus       158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~  237 (248)
T 3uzd_A          158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ  237 (248)
T ss_dssp             HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccC
Confidence            999999999999999999999999999999999999999999   99999999999999999999999999999999987


Q ss_pred             cccc
Q 026072          238 QEQI  241 (244)
Q Consensus       238 ~~~~  241 (244)
                      ++++
T Consensus       238 ~~~~  241 (248)
T 3uzd_A          238 QDDD  241 (248)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7655
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 244
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 1e-116
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 1e-110
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 7e-95
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 2e-88
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  330 bits (847), Expect = e-116
 Identities = 181/234 (77%), Positives = 209/234 (89%), Gaps = 4/234 (1%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE+ VY+AKLAEQAERYEEMV+FM+  V++S  + ELTVEERNLLSVAYKNVIG+ RA+W
Sbjct: 4   REENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASW 62

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C  ILKLLD+ L+PSA +G+SKVF
Sbjct: 63  RIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVF 122

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           YLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVF 182

Query: 186 YYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
           YYEILNS ++AC +AKQ   EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 183 YYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 85.5
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 82.9
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=8.5e-87  Score=581.00  Aligned_cols=232  Identities=78%  Similarity=1.152  Sum_probs=219.5

Q ss_pred             CcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhhhccCchhh
Q 026072            4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH   83 (244)
Q Consensus         4 ~~re~~i~~Aklaeq~ery~Dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~r~l~~ie~k~~~~~~~~~   83 (244)
                      ++|++++|+|||++|||||+||+.+||++++. .++++||.|||||||+||||+||++|+|||+|++++++++..|++.+
T Consensus         2 ~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~-~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~~   80 (236)
T d1o9da_           2 TAREENVYMAKLAEQAERYEEMVEFMEKVSNS-LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH   80 (236)
T ss_dssp             CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred             CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChHH
Confidence            58999999999999999999999999999982 22389999999999999999999999999999999999988888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhccccchhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 026072           84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI  163 (244)
Q Consensus        84 ~~~i~~yk~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~  163 (244)
                      ++.+++||++|++||..+|++|+++||++|+|.+++++++|||+|||||||||+|||..|+++++++++|.++|++|+++
T Consensus        81 ~~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~~  160 (236)
T d1o9da_          81 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI  160 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCchhHHHHhHHHHHHHHHhCCHHHHHHHHHH---HHHHhhhhcCCcchHhHHHHHHHHHhhHhhhhhc
Q 026072          164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ---EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  236 (244)
Q Consensus       164 a~~~L~pt~p~rLgL~LN~SVF~yEi~~~~~~A~~iak~---~Ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~e  236 (244)
                      |+.+||||||+||||+||||||||||+|++++||++|++   +|++++|++++++|+|+++|||||||||++|++|
T Consensus       161 a~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l~ee~~~ds~~i~qLLrdNl~lW~~e  236 (236)
T d1o9da_         161 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  236 (236)
T ss_dssp             HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred             HHhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHhcCC
Confidence            998999999999999999999999999999999999999   8999999999999999999999999999999975
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure