Citrus Sinensis ID: 026091
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 243 | 2.2.26 [Sep-21-2011] | |||||||
| P51106 | 354 | Dihydroflavonol-4-reducta | N/A | no | 0.991 | 0.680 | 0.462 | 4e-61 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.991 | 0.692 | 0.446 | 5e-60 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.991 | 0.694 | 0.442 | 1e-59 | |
| P51102 | 382 | Dihydroflavonol-4-reducta | no | no | 0.991 | 0.630 | 0.466 | 1e-59 | |
| P14720 | 380 | Dihydroflavonol-4-reducta | N/A | no | 0.962 | 0.615 | 0.463 | 4e-58 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.991 | 0.715 | 0.442 | 1e-57 | |
| P51108 | 357 | Dihydroflavonol-4-reducta | N/A | no | 0.979 | 0.666 | 0.497 | 1e-57 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.958 | 0.647 | 0.451 | 9e-57 | |
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.967 | 0.720 | 0.465 | 5e-56 | |
| P51105 | 366 | Dihydroflavonol-4-reducta | N/A | no | 0.979 | 0.650 | 0.432 | 3e-55 |
| >sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 160/242 (66%), Gaps = 1/242 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M+ KG V VTG +GF+GSWL+M+LL GY+VR TVR DP L LP A ERL
Sbjct: 1 MDGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVEKTKPLLELPGAKERLS 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
I+ ADL+ SF+ AIAGCTGV HVA P+D ++PE +I+ V G + I+++C ++GT
Sbjct: 60 IWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKR+V+TSSA +V+ + D+ WSD+DY R++ + G Y +SK LAE+AA+E+A
Sbjct: 120 VKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYAS 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+GLD ++IIP+ V GPF+ + S+ LA++ GN YS+L + +VH+DD+ A
Sbjct: 180 ENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMT 239
Query: 241 FF 242
F
Sbjct: 240 FL 241
|
Hordeum vulgare (taxid: 4513) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9 |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 162/242 (66%), Gaps = 1/242 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M E VCVTG +GFIGSWL+MRLL+HGY+VR TVR DP ++ + L +LP+A L
Sbjct: 1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL + SFD AI GC+GV HVA P+D K+PE +I+ ++G + ILK+C K+ T
Sbjct: 60 LWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+++V+TSSA TV+ + DE+ WSDV++ R + + G Y +SKTLAE+AA ++A+
Sbjct: 120 VRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAK 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+ +D +TIIP+ V GPF+ P + S+ L+ ++ N Y ++ VH+DD+ +HI
Sbjct: 180 ENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHI 239
Query: 241 FF 242
+
Sbjct: 240 YL 241
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 162/242 (66%), Gaps = 1/242 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M E VCVTG +GFIGSWL+MRLL+HGY+VR TVR DP ++ + L +LP+A L
Sbjct: 1 MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL + SFD AI GC+GV HVA P+D ++PE +I+ ++G + ILK+C K+ T
Sbjct: 60 LWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+++V+TSSA TV+ + DE+ WSDV++ R + + G Y +SKTLAE+AA ++A+
Sbjct: 120 VRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAK 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+ +D +TIIP+ V GPF+ P + S+ L+ ++ N Y ++ VH+DD+ +HI
Sbjct: 180 ENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHI 239
Query: 241 FF 242
+
Sbjct: 240 YL 241
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 157/242 (64%), Gaps = 1/242 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M +K VCVTG +GFIGSWL+MRLL+ GY VR TVR DP + + L +LP A L
Sbjct: 1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR-DPGNLKKVQHLLDLPNAKTLLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL+ S+D AI GC GV HVA P+D K+PE +I+ V+G +GI+K+C+K+ T
Sbjct: 60 LWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+R V+TSSA TV+ ++ DE WSD+++I + G Y +SKTLAE+AA +FAE
Sbjct: 120 VRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E GLD ++IIP+ V GPFI + S+ L+ + N YS++ VH+DD+ AHI
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHI 239
Query: 241 FF 242
F
Sbjct: 240 FL 241
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2 | Back alignment and function description |
|---|
Score = 224 bits (571), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 148/235 (62%), Gaps = 1/235 (0%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG GFIGSWL+MRLL+ GY+V TVR DPE K+ + L LP+A L ++ ADL
Sbjct: 18 VCVTGAAGFIGSWLVMRLLERGYNVHATVR-DPENKKKVKHLLELPKADTNLTLWKADLT 76
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SFD AI GC GV HVA P+D K+PE +I+ V G + I++SC K+ TVKR+V+T
Sbjct: 77 VEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFT 136
Query: 128 SSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLV 187
SSA T+ + D+T WSD+D+I + G Y SK LAE+AA+E A++ +D +
Sbjct: 137 SSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFI 196
Query: 188 TIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242
+IIP V GPFI P S+ L+++ GN Y ++ VH+DD+ AHIF
Sbjct: 197 SIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFL 251
|
Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 156/242 (64%), Gaps = 1/242 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M + VCVTG +GFIGSWL+MRLL+ +VR TVR DP + + L +LP+A L
Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVR-DPTNVKKVKHLLDLPKAETHLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL + SFD AI GCTGV HVA P+D K+PE +I+ + G +GI+KSC + T
Sbjct: 60 LWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+R+V+TSSA TV+ + + DE+ WSD+++ R + Y +SKTLAE+AA ++A+
Sbjct: 120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+ +D +TIIP+ V GPFI + S+ L+ + GN YS++ VH+DD+ AHI
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 241 FF 242
+
Sbjct: 240 YL 241
|
Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 161/239 (67%), Gaps = 1/239 (0%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
EKG V VTG +GF+GSWL+M+LL GY+VR TVR DP L +LP A+ERL I+
Sbjct: 9 EKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVGKTKPLMDLPGATERLSIWK 67
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
ADL SF AI GCTGV HVA P+D K+PE +I+ V G I I+++C ++GTV+R
Sbjct: 68 ADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRR 127
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
+V+TSSA TV+ + + DE W+DVD+ R++ + G Y +SKTLAE+AAL +A EHG
Sbjct: 128 IVFTSSAGTVNLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHG 187
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242
LDLVTIIP+ V GPFI + S+ LA++ GN YS+L + ++H+DD+ A IF
Sbjct: 188 LDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFL 246
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 154/235 (65%), Gaps = 2/235 (0%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +GFIGSWLIMRLL+ GY+VR TVR DP+ + + L +LP A L ++ ADL+
Sbjct: 25 VCVTGASGFIGSWLIMRLLERGYTVRATVR-DPDNTKKVQHLLDLPNAKTNLTLWKADLH 83
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SFDAA+ GCTGV H+A P+D K+PE +I+ ++G + ILKSC+K+ ++RVV+T
Sbjct: 84 EEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA-KLRRVVFT 142
Query: 128 SSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLV 187
SS TV+ + DET WS +D+IR + + G Y +SK LAE+AA ++A E+ L+ +
Sbjct: 143 SSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFI 202
Query: 188 TIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242
+IIP V GPFI P + S+ L+ + Y+++ VH+DD+ +HIF
Sbjct: 203 SIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFL 257
|
Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (553), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 157/243 (64%), Gaps = 8/243 (3%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M++ KG+VCVTG +GF+ SWL+ RLL GY V TVR DP ++ L+ L L A ERL+
Sbjct: 1 MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR-DPGNEKKLAHLWKLEGAKERLR 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
+ ADL SFD AI GC GV H A+P+ PEE I++ A+ GT+ +L+SC K+ +
Sbjct: 60 LVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNPS 119
Query: 121 VKRVVYTSSASTVHFSGKDVD---MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
+KRVV TSS+STV D D LDE+ W+ V+ ++ +W Y LSKTLAE+AA +
Sbjct: 120 LKRVVLTSSSSTVRIR-DDFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQAAWK 175
Query: 178 FAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVAR 237
F+EE+G+DLVT++PSF+ GP + P L + L ++ G E++ + VHIDDVAR
Sbjct: 176 FSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVAR 235
Query: 238 AHI 240
HI
Sbjct: 236 THI 238
|
Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 153/243 (62%), Gaps = 5/243 (2%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
E+ VCVTG GFIGSWL+MRLL+ GY V TVR DP + + L LP+A L++
Sbjct: 3 EDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVR-DPGDLKKVKHLLELPKAQTNLKL 61
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
+ ADL SFD AI GC GV H+A P+D K+PE II+ + G + I++SC+K+ TV
Sbjct: 62 WKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTV 121
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI--RKLDIWGKSYKLSKTLAERAALEFA 179
K++V+TSSA TV+ K + + DE+ WSD+D+I +K+ W Y +SKTLAE+AA +
Sbjct: 122 KKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAAWDAT 179
Query: 180 EEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAH 239
+ + + ++IIP+ V GPFI S+ L+++ GN YS++ VH+DD+ H
Sbjct: 180 KGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECH 239
Query: 240 IFF 242
I+
Sbjct: 240 IYL 242
|
Gerbera hybrida (taxid: 18101) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 243 | ||||||
| 224063846 | 327 | predicted protein [Populus trichocarpa] | 0.995 | 0.740 | 0.648 | 3e-94 | |
| 225453897 | 327 | PREDICTED: dihydroflavonol-4-reductase [ | 0.995 | 0.740 | 0.636 | 7e-92 | |
| 147769574 | 327 | hypothetical protein VITISV_025424 [Viti | 0.995 | 0.740 | 0.632 | 8e-92 | |
| 225453895 | 327 | PREDICTED: dihydroflavonol-4-reductase [ | 0.995 | 0.740 | 0.623 | 4e-91 | |
| 296089142 | 665 | unnamed protein product [Vitis vinifera] | 0.995 | 0.363 | 0.648 | 4e-90 | |
| 225453889 | 335 | PREDICTED: dihydroflavonol-4-reductase i | 0.995 | 0.722 | 0.648 | 4e-90 | |
| 225453893 | 351 | PREDICTED: dihydroflavonol-4-reductase-l | 0.991 | 0.686 | 0.639 | 6e-89 | |
| 255570805 | 326 | cinnamoyl-CoA reductase, putative [Ricin | 0.983 | 0.733 | 0.645 | 6e-89 | |
| 224087435 | 328 | predicted protein [Populus trichocarpa] | 0.995 | 0.737 | 0.646 | 6e-89 | |
| 124360310 | 283 | NAD-dependent epimerase/dehydratase [Med | 0.995 | 0.855 | 0.614 | 5e-87 |
| >gi|224063846|ref|XP_002301290.1| predicted protein [Populus trichocarpa] gi|222843016|gb|EEE80563.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 197/242 (81%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME +KG+VCVTGGTGF+ SWLIMRLL+HGYSV TT+R DPE KRD+SFLT+LP ASE+LQ
Sbjct: 1 MEGDKGKVCVTGGTGFLASWLIMRLLEHGYSVHTTIRPDPEHKRDVSFLTSLPEASEKLQ 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
IF ADL++P SF+ AI GC GV HVA P+D KEPEEV++QRA+ GT+GILK+CL S T
Sbjct: 61 IFQADLSDPNSFEVAIKGCIGVFHVATPVDFESKEPEEVVVQRAIDGTLGILKACLNSMT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS + V F+ DVD +DE++W+DV+Y++ L + Y +SKTL E+ ALEFA+
Sbjct: 121 VKRVVYTSSGAAVVFNDSDVDTMDESYWTDVEYVKALKSFAGPYFISKTLTEKRALEFAD 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
EHG DLV+IIPSF+ GPFIC + GSV +LAMV+G +++Y LLN+SMVH+DDVARAHI
Sbjct: 181 EHGFDLVSIIPSFINGPFICSKFPGSVHTSLAMVLGEQQKYGTLLNMSMVHVDDVARAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453897|ref|XP_002278913.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089144|emb|CBI38847.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 154/242 (63%), Positives = 194/242 (80%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKGRVCVTGGTGFI SWL+M+LL HGYSV T+RS P+ K+D+S+LTNLP ASE+L+
Sbjct: 1 MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
I+NADL++P SF+AAI GC GV HVA PID EPEE + +R+V GT+GILK+CL S T
Sbjct: 61 IYNADLSDPSSFEAAIEGCIGVFHVAHPIDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS S V ++ K D+ DE+ WSDVD+++ L+ WG SY +SKT+ ERAAL+FA
Sbjct: 121 VKRVVYTSSTSAVEYNDKGGDIKDESSWSDVDFLKALNYWGLSYMISKTMTERAALDFAH 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
EHGLDLVT+IPSFV GPFICP+ GSV LA+V+G+++ Y L+++SMVH+DDV AHI
Sbjct: 181 EHGLDLVTVIPSFVVGPFICPRFPGSVNAALALVLGDQQHYHFLMSVSMVHVDDVCSAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147769574|emb|CAN76937.1| hypothetical protein VITISV_025424 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 153/242 (63%), Positives = 195/242 (80%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKGRVCVTGGTGFI SWL+M+LL HGYSV T+RS P+ K+D+S+LTNLP ASE+L+
Sbjct: 1 MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
I+NADL++P SF+AAI GC GV HVA P+D EPEE + +R+V GT+GILK+CL S T
Sbjct: 61 IYNADLSDPSSFEAAIEGCNGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS+S V ++ K ++ DE+ WSDVD+++ L+ WG SY +SKT ERAAL+FA
Sbjct: 121 VKRVVYTSSSSAVEYNDKGGNIKDESSWSDVDFLKALNYWGXSYMISKTXTERAALDFAH 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
EHGLDLVT+IPSFV GPFICP+ GSV LA+V+G++++Y +L+NISMVH+DD AHI
Sbjct: 181 EHGLDLVTVIPSFVVGPFICPRFPGSVNTALALVLGDQQQYHILMNISMVHVDDACSAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453895|ref|XP_002278887.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089143|emb|CBI38846.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 196/242 (80%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKGRVCVTGGTGFI SWL+M+LL HGYSV T+RS P+ K+D+S+LTNLP ASE+L+
Sbjct: 1 MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
I+NADL++P SF+AAI GC GV HVA P+D EPEE + +R+V GT+GILK+CL S T
Sbjct: 61 IYNADLSDPSSFEAAIEGCIGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS + V + K D+ DE+ W+DVD+++ L+ WG+SY +SKT+ ER+AL+FA+
Sbjct: 121 VKRVVYTSSTAAVVLNDKGGDIKDESSWTDVDFLKALNYWGQSYMISKTITERSALDFAQ 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
EHGLDLVT+ PSFV GPFICP+ GSV LA+V+G++++Y +L+NISMVH+DDV AHI
Sbjct: 181 EHGLDLVTVTPSFVVGPFICPRFPGSVNTALALVLGDQQQYHVLMNISMVHVDDVCSAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089142|emb|CBI38845.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 188/242 (77%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKG+VCVTGGTGFI SWLIM+LL HGYSV T+RS P+ K+D+ +LTNLP ASERLQ
Sbjct: 1 MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPQIKKDIRYLTNLPGASERLQ 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
IF ADL+ P+SFDAAI GC GV HVA P+D EP+E +I+R+V GT+GILK CLKS T
Sbjct: 61 IFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCLKSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS + V ++ KD D++DE+ WSD+D I + G SY +SKT ERAALEFAE
Sbjct: 121 VKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAALEFAE 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
+HGLDLV++IPSFV GPFICP GSV LAM++GN+ Y L N SMVH+DDVA AHI
Sbjct: 181 QHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVASAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453889|ref|XP_002278819.1| PREDICTED: dihydroflavonol-4-reductase isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 188/242 (77%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKG+VCVTGGTGFI SWLIM+LL HGYSV T+RS P+ K+D+ +LTNLP ASERLQ
Sbjct: 1 MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPQIKKDIRYLTNLPGASERLQ 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
IF ADL+ P+SFDAAI GC GV HVA P+D EP+E +I+R+V GT+GILK CLKS T
Sbjct: 61 IFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCLKSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSS + V ++ KD D++DE+ WSD+D I + G SY +SKT ERAALEFAE
Sbjct: 121 VKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAALEFAE 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
+HGLDLV++IPSFV GPFICP GSV LAM++GN+ Y L N SMVH+DDVA AHI
Sbjct: 181 QHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVASAHI 240
Query: 241 FF 242
F
Sbjct: 241 FL 242
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453893|ref|XP_002278874.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 154/241 (63%), Positives = 188/241 (78%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
E EKGRVCVTGGTGFI SWLIM+LL HGYSV T+RS P K+D+S++TNLP ASE+LQI
Sbjct: 26 ENEKGRVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPGSKKDISYITNLPGASEKLQI 85
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
FNADL+ P SF+ A+ GC GV HVA P+D +EPEE + +R+V GT+ ILK+CL S TV
Sbjct: 86 FNADLSEPHSFEPALEGCIGVFHVAHPVDFEAREPEETVTRRSVEGTLAILKACLNSKTV 145
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
KRVVYTSSAS V F+ KD DM DE+ WSDV++IR L + Y +SKT ERAALEFAE+
Sbjct: 146 KRVVYTSSASAVVFNDKDEDMKDESSWSDVEFIRSLGSFAGPYMISKTETERAALEFAEK 205
Query: 182 HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241
HGLDLVT++PSFV GPF+CP L GSV+ L M+ G +++Y L+N SMVH+DDVA AHIF
Sbjct: 206 HGLDLVTLLPSFVVGPFLCPFLPGSVQMALTMIKGIQDQYQNLMNTSMVHVDDVASAHIF 265
Query: 242 F 242
Sbjct: 266 L 266
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570805|ref|XP_002526355.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223534314|gb|EEF36026.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 155/240 (64%), Positives = 191/240 (79%), Gaps = 1/240 (0%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
E+ +V VTGGTG++ SWLIMRLLDHGYSV TT+R DPEQKRD++FLT+LP AS++L+IF+
Sbjct: 2 EENKVAVTGGTGYVASWLIMRLLDHGYSVHTTIRPDPEQKRDITFLTSLPGASDKLKIFH 61
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
ADL++P SFD AI GC GV HVA P H +EPEEV+ ++A+ GTIGILK CL S TVK
Sbjct: 62 ADLSDPNSFDDAIKGCIGVFHVATPTPGHYTEEPEEVVTRKAIDGTIGILKVCLNSKTVK 121
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
RVVYTSS S V F+ K+ ++DE+FWSDVDYI+ L+ + Y +SKTLAE+ ALEFAEEH
Sbjct: 122 RVVYTSSTSAVDFNDKNAQVMDESFWSDVDYIKALNSFASPYWVSKTLAEKKALEFAEEH 181
Query: 183 GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242
GLDLVT+IPSFV GPFICP L SV LAM+ G + Y++L N SMVH+DD+ARAHIF
Sbjct: 182 GLDLVTVIPSFVVGPFICPNLPASVEAALAMIFGKSDLYNLLRNTSMVHVDDLARAHIFL 241
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224087435|ref|XP_002308165.1| predicted protein [Populus trichocarpa] gi|222854141|gb|EEE91688.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/243 (64%), Positives = 191/243 (78%), Gaps = 1/243 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME EKGRVCVTGGTGF+ SWLIM+LL+ GYSV TTVR PE KRD+SFLT+LP SERL+
Sbjct: 1 MEGEKGRVCVTGGTGFVASWLIMKLLEQGYSVNTTVRPHPEHKRDVSFLTSLPGGSERLE 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAP-IDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119
IF ADL+ P FD AI GC GV HVA+P +D EPEEV+IQRA GT+GILK+CL S
Sbjct: 61 IFYADLSEPSGFDVAIKGCIGVFHVASPTLDFGNGEPEEVVIQRATDGTLGILKACLNSK 120
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
TVKRVV TSSAS V F+G V+M+DE +WSDVDYI+ ++ Y +SKTL E+ ALEFA
Sbjct: 121 TVKRVVLTSSASAVAFNGSGVEMMDEAYWSDVDYIKASNLPIGPYFISKTLTEKRALEFA 180
Query: 180 EEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAH 239
+EHGLDLVT+ P+++ GPFICP + SV +LAMV+G+RE+Y +L+N M+HIDDVARAH
Sbjct: 181 QEHGLDLVTLAPTYIHGPFICPNMPSSVHISLAMVLGDREQYGLLINAPMLHIDDVARAH 240
Query: 240 IFF 242
IF
Sbjct: 241 IFL 243
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|124360310|gb|ABN08323.1| NAD-dependent epimerase/dehydratase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 192/244 (78%), Gaps = 2/244 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME+ KGRVCVTGGTGFIGSW+I RLL+ GY+V TTVRS+P QK+D+SFLT+LP AS++LQ
Sbjct: 1 MEKGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRSNPGQKKDVSFLTDLPNASQKLQ 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
IFNADL+NPESF+AAI GC GV H A P+D KEPEE++I+R + G +GILK+C S T
Sbjct: 61 IFNADLSNPESFNAAIEGCIGVFHTATPVDFELKEPEEIVIKRTIDGALGILKACKNSKT 120
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
VKRVVYTSSAS V K+V+++DE++WSDV+ +R L + SY +SKTLAE+A LEF E
Sbjct: 121 VKRVVYTSSASAVCMQNKEVEVMDESYWSDVNNLRTLKPFAWSYAVSKTLAEKAVLEFGE 180
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG--NREEYSMLLNISMVHIDDVARA 238
+HGLD+VT++P+FV GPFICP+L SV +LA + G N+ ++ MVH+DDVARA
Sbjct: 181 QHGLDIVTLLPTFVVGPFICPKLPSSVHSSLAFLFGGINKNPLMLVSRTGMVHVDDVARA 240
Query: 239 HIFF 242
HIF
Sbjct: 241 HIFL 244
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 243 | ||||||
| TAIR|locus:2050882 | 364 | BEN1 [Arabidopsis thaliana (ta | 0.983 | 0.656 | 0.522 | 7.5e-57 | |
| TAIR|locus:2165427 | 382 | DFR "dihydroflavonol 4-reducta | 0.987 | 0.628 | 0.431 | 5.8e-50 | |
| TAIR|locus:2122093 | 326 | DRL1 "dihydroflavonol 4-reduct | 0.967 | 0.720 | 0.432 | 7.7e-48 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.954 | 0.713 | 0.413 | 3.3e-40 | |
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.930 | 0.693 | 0.417 | 3.3e-40 | |
| TAIR|locus:2195733 | 340 | BAN "BANYULS" [Arabidopsis tha | 0.954 | 0.682 | 0.371 | 3.7e-39 | |
| TAIR|locus:2201272 | 321 | TKPR2 "tetraketide alpha-pyron | 0.930 | 0.704 | 0.382 | 5.5e-38 | |
| TAIR|locus:2012315 | 322 | AT1G09510 [Arabidopsis thalian | 0.934 | 0.704 | 0.381 | 3e-37 | |
| TAIR|locus:2051018 | 321 | CRL2 "CCR(Cinnamoyl coA:NADP o | 0.934 | 0.707 | 0.4 | 4.9e-37 | |
| TAIR|locus:2131734 | 354 | AT4G27250 [Arabidopsis thalian | 0.971 | 0.666 | 0.374 | 2.1e-36 |
| TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 128/245 (52%), Positives = 158/245 (64%)
Query: 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNLPRASERLQI 61
+E G VCVTGG+GF+ SWLIMRLL GYSVR TVR++ E K+D+S+LT LP ASERLQI
Sbjct: 35 DETGLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASERLQI 94
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
F ADLN PESF AI GC V HVA P+D + E EE + +R V G +GILKSCL + TV
Sbjct: 95 FTADLNEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVTKRTVQGLMGILKSCLDAKTV 154
Query: 122 KRVVYTSSASTVHFSGKDVD---MLDETFWSDVDYIR--KLDIWGKSYKLSKTXXXXXXX 176
KR YTSSA TV +SG + +DE+ WSDV+ R K SY +SK
Sbjct: 155 KRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSKMAAETAAL 214
Query: 177 XXXXXHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVA 236
+GL++VT++ V GPFI L SV +LAM+ GN +E + +MVHIDDVA
Sbjct: 215 EFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFGNYKEKYLFDTYNMVHIDDVA 274
Query: 237 RAHIF 241
RA IF
Sbjct: 275 RAMIF 279
|
|
| TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 104/241 (43%), Positives = 146/241 (60%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M +K VCVTG +GFIGSWL+MRLL+ GY VR TVR DP + + L +LP A L
Sbjct: 1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR-DPGNLKKVQHLLDLPNAKTLLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL+ S+D AI GC GV HVA P+D K+PE +I+ V+G +GI+K+C+K+ T
Sbjct: 60 LWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXX 180
V+R V+TSSA TV+ ++ DE WSD+++I + G Y +SKT
Sbjct: 120 VRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179
Query: 181 XHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
GLD ++IIP+ V GPFI + S+ L+ + N YS++ VH+DD+ AHI
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHI 239
Query: 241 F 241
F
Sbjct: 240 F 240
|
|
| TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 105/243 (43%), Positives = 146/243 (60%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M++ KG+VCVTG +GF+ SWL+ RLL GY V TVR DP ++ L+ L L A ERL+
Sbjct: 1 MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR-DPGNEKKLAHLWKLEGAKERLR 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
+ ADL SFD AI GC GV H A+P+ PEE I++ A+ GT+ +L+SC K+ +
Sbjct: 60 LVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNPS 119
Query: 121 VKRVVYTSSASTVHFSGKDVDM---LDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXX 177
+KRVV TSS+STV D D LDE+ W+ V+ ++ +W Y LSKT
Sbjct: 120 LKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQAAWK 175
Query: 178 XXXXHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVAR 237
+G+DLVT++PSF+ GP + P L + L ++ G E++ + VHIDDVAR
Sbjct: 176 FSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVAR 235
Query: 238 AHI 240
HI
Sbjct: 236 THI 238
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 100/242 (41%), Positives = 138/242 (57%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
EEEK VCVTG +G+I SW++ LL GY+V+ +VR DP R L L A ERL++
Sbjct: 4 EEEK-TVCVTGASGYIASWIVKLLLLRGYTVKASVR-DPNDPRKTEHLLALEGAEERLKL 61
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
F A+L SFD+AI GC GV H A+P K+P+ ++ AV GTI +L SCLK+ +V
Sbjct: 62 FKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLKTSSV 121
Query: 122 KRVVYTSSASTVHFSGKD---VDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXX 178
KRVV TSS + V F+G ++DET+++D DY R +W Y LSKT
Sbjct: 122 KRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLW---YVLSKTLAENAAWKF 178
Query: 179 XXXHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ L LV+I P+ V GP + P L S L+++ G + + V++ DVA A
Sbjct: 179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTFPNA--TFGWVNVKDVANA 236
Query: 239 HI 240
HI
Sbjct: 237 HI 238
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| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 99/237 (41%), Positives = 135/237 (56%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +G+I SWL+ LL GY+V+ +VR DP + L +L A ERL +F ADL
Sbjct: 10 VCVTGASGYIASWLVKFLLSRGYTVKASVR-DPSDPKKTQHLVSLEGAKERLHLFKADLL 68
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SFD+AI GC GV H A+P K+P+ +I AV GT+ +L SC K+ +VKRVV T
Sbjct: 69 EQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVT 128
Query: 128 SSASTVHFSGK----DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXXXHG 183
SS + V ++GK DV + DET++SD + +W Y LSKT G
Sbjct: 129 SSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMW---YVLSKTLAEDAAWKLAKEKG 184
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
LD+VTI P+ V GP + P L S L ++ G + + L+ V++ DVA AHI
Sbjct: 185 LDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPN--LSFGWVNVKDVANAHI 239
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| TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 91/245 (37%), Positives = 145/245 (59%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+ CV GGTG + S LI LL GY V TTVR DPE ++ ++ L L + L+IF ADL
Sbjct: 12 KACVIGGTGNLASILIKHLLQSGYKVNTTVR-DPENEKKIAHLRKLQELGD-LKIFKADL 69
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ +SF+++ +GC + HVA PI+ ++PE+ +I+ A+ G I +LKSCLKS +VKRV+Y
Sbjct: 70 TDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIY 129
Query: 127 TSSASTV---HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXXXHG 183
TSSA+ V + SG + M +E W+DV+++ + + Y +SK +
Sbjct: 130 TSSAAAVSINNLSGTGIVMNEEN-WTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENK 188
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN-------REEYSMLLNISMVHIDDVA 236
++LVT+IP+ + G + S+ +++ + G +E + +IS VH+DD+A
Sbjct: 189 INLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLA 248
Query: 237 RAHIF 241
RAH+F
Sbjct: 249 RAHLF 253
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| TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 90/235 (38%), Positives = 131/235 (55%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTGGTGFI S++I LL+ G++VRTTVR+ P + + FL A +RL+I ADL
Sbjct: 6 VTGGTGFIASYIIKSLLELGHTVRTTVRN-PRDEEKVGFLWEFQGAKQRLKILQADLTVE 64
Query: 70 ESFDAAIAGCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYT 127
SFD A+ G GV H A+P+ + +E ++ + GT ++ SC KS T+KR+V T
Sbjct: 65 GSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKRIVLT 124
Query: 128 SSASTVH--FSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXXXHGLD 185
SS S++ F + L+E+ WSD +Y ++ ++W Y +KT GLD
Sbjct: 125 SSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLW---YGYAKTLGEREAWRIAEEKGLD 181
Query: 186 LVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
LV + PSFV GP + P+ ++ LA+ G EY + VHIDDV AH+
Sbjct: 182 LVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNF-TVGFVHIDDVVAAHV 235
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| TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 90/236 (38%), Positives = 134/236 (56%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +G++ SW++ LL GY+VR TVR DP ++ L L A E+L++F ADL
Sbjct: 8 VCVTGASGYVASWIVKLLLLRGYTVRATVR-DPSDEKKTEHLLALDGAKEKLKLFKADLL 66
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SF+ AI GC V H A+P+ + +P+ +I AV GT+ +LK+C K +VKRV+ T
Sbjct: 67 EEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVIVT 126
Query: 128 SSASTVHFSGKDV---DMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXXXHGL 184
SS + V F + D++DE+ +SD ++ + +W Y LSKT GL
Sbjct: 127 SSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLW---YALSKTLAEDEAWRFAKEKGL 183
Query: 185 DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
DLV I P V GP + P L SV + ++ G ++ + + + +V + DVA AHI
Sbjct: 184 DLVVINPGLVLGPLLKPSLTFSVNVIVELITG-KDNF-INKDFRLVDVRDVALAHI 237
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| TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 96/240 (40%), Positives = 135/240 (56%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+KG+VCVTG GF+GSW++ LL Y V TVR DP ++ + L L +A ++L++F
Sbjct: 5 QKGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVR-DPGNEK-YAHLKKLDKAGDKLKLFK 62
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHG-KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
ADL N S +AIAGC+GV HVA P+ PE +I AV GT+ +LK+C+++ VK
Sbjct: 63 ADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEA-KVK 121
Query: 123 RVVYTSSASTVHFSG--KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTXXXXXXXXXXX 180
RVVY SS S V + +LDET WSD DY +K + W Y LSKT
Sbjct: 122 RVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENW---YSLSKTRAESEAFEFAK 178
Query: 181 XHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS--MVHIDDVARA 238
GLDLV++ P+ V GP + + +L ++ +E Y N +V + DVA+A
Sbjct: 179 RTGLDLVSVCPTLVLGPVLQQHTVNA--SSLVLLKLLKEGYESRNNQERHLVDVRDVAQA 236
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| TAIR|locus:2131734 AT4G27250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/259 (37%), Positives = 148/259 (57%)
Query: 2 EEEK-GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
EE K CVTG +G+IGSWL+ LL GY+V T+R + + + + + +ERL+
Sbjct: 6 EESKTATYCVTGASGYIGSWLVKSLLQRGYTVHATLRDLAKSE----YFQSKWKENERLR 61
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPI--DIHGKEP------EEVIIQRAVSGTIGIL 112
+F ADL + SFD A+ GC GV HVAA + DI + +I+ A+ G +L
Sbjct: 62 LFRADLRDDGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVL 121
Query: 113 KSCLKSGTVKRVVYTSSASTVHFSGKDVDM---LDETFWSDVDYIRKLDIWGKSYKLSKT 169
SCLKS +VKRVV+TSS ST+ ++ M +DET + VD++ K G Y LSK
Sbjct: 122 SSCLKSKSVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKL 181
Query: 170 XXXXXXXXXXXXHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML--LN- 226
G+DLV++I + V+GPF+ P + SV+ L+ + G+ + +++L +N
Sbjct: 182 VSEEEAFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPITGDSKLFAILSAVNK 241
Query: 227 ----ISMVHIDDVARAHIF 241
I++VHI+D+ RAH+F
Sbjct: 242 RMGSIALVHIEDICRAHLF 260
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pm.C_LG_II0668 | hypothetical protein (327 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 243 | |||
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 1e-118 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 3e-91 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 2e-71 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 4e-71 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 2e-70 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 7e-66 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 1e-64 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 5e-52 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 3e-46 | |
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 4e-41 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 3e-36 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 4e-36 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-33 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-33 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 1e-29 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 6e-26 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 1e-23 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 2e-20 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 4e-20 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-19 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 7e-18 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 8e-18 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 5e-17 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-14 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 3e-14 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 6e-14 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-13 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 1e-13 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 2e-13 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 7e-13 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 2e-12 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 4e-12 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-11 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 5e-11 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 5e-11 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 7e-11 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 3e-10 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 3e-10 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 4e-10 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 6e-10 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 2e-09 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 2e-09 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 5e-09 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 9e-09 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-08 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 1e-08 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 2e-08 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 2e-08 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 2e-08 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 2e-08 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 6e-08 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 7e-08 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 1e-07 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 4e-07 | |
| cd08947 | 224 | cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio | 4e-07 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 1e-06 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 4e-06 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 1e-05 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 2e-05 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 2e-05 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 3e-05 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 4e-05 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 5e-05 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 9e-05 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 9e-05 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 1e-04 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 2e-04 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 3e-04 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 5e-04 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 9e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 0.001 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 0.001 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 0.001 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 0.001 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 0.002 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 0.003 | |
| TIGR03589 | 324 | TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd | 0.003 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 0.003 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 0.003 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 0.004 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-118
Identities = 121/236 (51%), Positives = 167/236 (70%), Gaps = 7/236 (2%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +GFIGSWL+ RLL GY+VR TVR DP ++ ++ L L A ERL++F ADL
Sbjct: 1 VCVTGASGFIGSWLVKRLLQRGYTVRATVR-DPGDEKKVAHLLELEGAKERLKLFKADLL 59
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+ SFDAAI GC GV HVA+P+D ++PEE +I+ AV GT+ +L++C K+ +VKRVV+T
Sbjct: 60 DYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119
Query: 128 SSASTVHFS--GKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
SS + V ++ + ++DE+ WSD+D+ +K +W Y LSKTLAE+AA EFAEE+GLD
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLW---YALSKTLAEKAAWEFAEENGLD 176
Query: 186 LVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241
LVT+ PS V GPF+ P L S + L+++ GN E Y +++VH+DDVA AHI
Sbjct: 177 LVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGS-LALVHVDDVADAHIL 231
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 3e-91
Identities = 115/241 (47%), Positives = 161/241 (66%), Gaps = 1/241 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M +K VCVTG +GFIGSWL+MRLL+ GY+VR TVR DP + + L +LP A+ RL
Sbjct: 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL SFD AI GCTGV HVA P+D K+PE +I+ V+G + I+K+C K+ T
Sbjct: 60 LWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+R+V+TSSA TV+ + DE WSD+D+ R+ + G Y +SKTLAE+AA ++A
Sbjct: 120 VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+GLD ++IIP+ V GPFI + S+ L+++ GN YS++ VH+DD+ AHI
Sbjct: 180 ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI 239
Query: 241 F 241
F
Sbjct: 240 F 240
|
Length = 351 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 2e-71
Identities = 104/239 (43%), Positives = 142/239 (59%), Gaps = 15/239 (6%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +G+I SWL+ LL GY+V+ TVR DP + L L A ERL +F A+L
Sbjct: 7 VCVTGASGYIASWLVKLLLQRGYTVKATVR-DPNDPKKTEHLLALDGAKERLHLFKANLL 65
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SFD+ + GC GV H A+P +P+ +I AV GT+ +L+SC K +VKRVV T
Sbjct: 66 EEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVT 125
Query: 128 SSASTVHFSGK----DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
SS + V ++GK DV ++DET++SD + + +W Y LSKTLAE AA +FA+E+G
Sbjct: 126 SSMAAVAYNGKPLTPDV-VVDETWFSDPAFCEESKLW---YVLSKTLAEEAAWKFAKENG 181
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM--VHIDDVARAHI 240
+D+VTI P+ V GP + P L S L ++ G N S V + DVA AHI
Sbjct: 182 IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGA----QTFPNASYRWVDVRDVANAHI 236
|
Length = 322 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 4e-71
Identities = 106/249 (42%), Positives = 157/249 (63%), Gaps = 17/249 (6%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
K CV GGTGF+ S LI LL GY+V TTVR DPE ++ ++ L L + L+IF A
Sbjct: 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR-DPENQKKIAHLRALQELGD-LKIFGA 66
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
DL + ESF+A IAGC V HVA P++ ++PE +I+ A+ G +LK+C K+ +VKRV
Sbjct: 67 DLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRV 126
Query: 125 VYTSSASTV---HFSGKDVDMLDETFWSDVDYIR--KLDIWGKSYKLSKTLAERAALEFA 179
+ TSSA+ V SG + +++E W+DV+++ K WG Y SKTLAE+AA +FA
Sbjct: 127 ILTSSAAAVSINKLSGTGL-VMNEKNWTDVEFLTSEKPPTWG--YPASKTLAEKAAWKFA 183
Query: 180 EEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR------EEYSMLL-NISMVHI 232
EE+ +DL+T+IP+ + GP + + S+ ++++ GN + ML +IS+ H+
Sbjct: 184 EENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHV 243
Query: 233 DDVARAHIF 241
+DV RAHIF
Sbjct: 244 EDVCRAHIF 252
|
Length = 338 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 217 bits (553), Expect = 2e-70
Identities = 92/241 (38%), Positives = 137/241 (56%), Gaps = 11/241 (4%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
V VTG +GF+ S ++ +LL+ GY VR TVR DP + + ++ L +L RL++ ADL
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVR-DPSKVKKVNHLLDLDAKPGRLELAVADLT 59
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+ +SFD I GC GV HVA P+ K+P EVI + A+ GT+ LK+ + +VKR V T
Sbjct: 60 DEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVI-KPAIGGTLNALKAAAAAKSVKRFVLT 118
Query: 128 SSASTVHFSGKDVD--MLDETFWSDVDYIR--KLDIWGKSYKLSKTLAERAALEFAEEHG 183
SSA +V +V+ +LDE W+ ++ K W Y SKTLAE+AA +FA+E+
Sbjct: 119 SSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV--YAASKTLAEKAAWKFADENN 176
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI---SMVHIDDVARAHI 240
+DL+T+IP+ G + S ++++ GN L I VH+ D+ AHI
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHI 236
Query: 241 F 241
Sbjct: 237 G 237
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 7e-66
Identities = 104/258 (40%), Positives = 154/258 (59%), Gaps = 22/258 (8%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
E G CVTG TG+IGSWL+ LL GY+V T+R DP + L L+ + +RL++
Sbjct: 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR-DPA--KSLHLLSKW-KEGDRLRL 62
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEE--------VIIQRAVSGTIGILK 113
F ADL SFD A+ GC GV HVAA ++ +I A+ GT+ +LK
Sbjct: 63 FRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLK 122
Query: 114 SCLKSGTVKRVVYTSSASTVHF---SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTL 170
SCLKS TVKRVV+TSS ST+ +G+ ++DET + +D++ G Y LSK L
Sbjct: 123 SCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLL 182
Query: 171 AERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL----- 225
E AA ++A+E+G+DLV++I + V GPF+ P + S++ L+ + G+ + +S+L
Sbjct: 183 TEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSR 242
Query: 226 --NISMVHIDDVARAHIF 241
+I++VHI+D+ AHIF
Sbjct: 243 MGSIALVHIEDICDAHIF 260
|
Length = 353 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 1e-64
Identities = 85/241 (35%), Positives = 122/241 (50%), Gaps = 11/241 (4%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V VTG TGFI S ++ +LL GY VR TVRS + L L ++RL+ D
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRS-LSKSAKLKALLKAAGYNDRLEFVIVDD 59
Query: 67 -NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
P ++D A+ G VIHVA+P G + E+ +I AV GT+ +L++ +G+VKRVV
Sbjct: 60 LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVV 119
Query: 126 YTSSASTVHFSGKDVD---MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
TSS + V D + E W+D+ + + Y SKTLAE+AA EF +E+
Sbjct: 120 LTSSVAAV-GDPTAEDPGKVFTEEDWNDLTISKSNGLDA--YIASKTLAEKAAWEFVKEN 176
Query: 183 --GLDLVTIIPSFVTGPFICPQ-LAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAH 239
+L+TI P +V GP + L S ++ G L V + DVA AH
Sbjct: 177 KPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAH 236
Query: 240 I 240
+
Sbjct: 237 V 237
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 5e-52
Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 9/236 (3%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +G+I SW++ LL GY+V+ TVR D ++ L L A ERL++F ADL
Sbjct: 8 VCVTGASGYIASWIVKLLLLRGYTVKATVR-DLTDRKKTEHLLALDGAKERLKLFKADLL 66
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
SF+ AI GC V H A+P+ K+P+ +I A+ GTI +L +C ++ +VKRV+ T
Sbjct: 67 EESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126
Query: 128 SSASTVHFSGKDV---DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
SS + V F + D++DETF+SD R+ W Y LSK LAE AA EFA+++G+
Sbjct: 127 SSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW---YPLSKILAENAAWEFAKDNGI 183
Query: 185 DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
D+V + P F+ GP + P L SV + + G + V + DVA AHI
Sbjct: 184 DMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYR--FVDVRDVALAHI 237
|
Length = 322 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-46
Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 10/237 (4%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG +G+I SW++ LL GY++ TVR DP+ ++ L L A ERL++F ADL
Sbjct: 8 VCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLL 66
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGK-EPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ SF+ AI GC V H A+P+ I K +P+ +I AV+GTI +L++C K +VKRV+
Sbjct: 67 DEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVIL 126
Query: 127 TSSASTVHFSGKDV---DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
TSS + V + D++DETF+++ + + W Y LSKTLAE AA FA+++
Sbjct: 127 TSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW---YVLSKTLAEDAAWRFAKDNE 183
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
+DL+ + P VTGP + P L SV + +M + ++ + V + DVA AH+
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSV-AVIVELMKGKNPFNTTHH-RFVDVRDVALAHV 238
|
Length = 325 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 143 bits (361), Expect = 4e-41
Identities = 88/238 (36%), Positives = 141/238 (59%), Gaps = 17/238 (7%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VCVTG G+I SW++ LL+ GY+V+ TVR +P+ ++ + L L ERL + ADL
Sbjct: 13 VCVTGAGGYIASWIVKILLERGYTVKGTVR-NPDDPKN-THLRELEGGKERLILCKADLQ 70
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+ E+ AAI GC GV H A+P+ +PE+ +++ AV+G ++ + ++ VKRVV T
Sbjct: 71 DYEALKAAIDGCDGVFHTASPVT---DDPEQ-MVEPAVNGAKFVINAAAEA-KVKRVVIT 125
Query: 128 SSASTVHFS-GKDVD-MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
SS V+ +D + ++DE+ WSD+D+ + W Y K +AE+AA E A+E G+D
Sbjct: 126 SSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW---YCYGKMVAEQAAWETAKEKGVD 182
Query: 186 LVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHID--DVARAHIF 241
LV + P V GP + P + S+ L + G+ + Y+ N++ ++D DVA AH+
Sbjct: 183 LVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA---NLTQAYVDVRDVALAHVL 237
|
Length = 342 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 3e-36
Identities = 92/241 (38%), Positives = 124/241 (51%), Gaps = 32/241 (13%)
Query: 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
+V VTG TGF+GS ++ LL+ G VR VR D L L ++I D
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTS----DRRNLEGLD-----VEIVEGD 51
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
L +P S A+AGC + HVAA + +PEE + V GT +L++ L++G V+RVV
Sbjct: 52 LRDPASLRKAVAGCRALFHVAADYRLWAPDPEE-MYAANVEGTRNLLRAALEAG-VERVV 109
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
YTSS +T+ G D DET S +D D+ G YK SK LAE+AALE A E GL
Sbjct: 110 YTSSVATLGVRG-DGTPADETTPSSLD-----DMIG-HYKRSKFLAEQAALEMAAEKGLP 162
Query: 186 LVTIIPSFVTGPF-ICPQLAGSV-----RGTLAMVMGNREEYSMLLNISMVHIDDVARAH 239
+V + PS GP I P G + G + + LN+ VH+DDVA H
Sbjct: 163 VVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTG------LNL--VHVDDVAEGH 214
Query: 240 I 240
+
Sbjct: 215 L 215
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 4e-36
Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
+E VCV +G++G WL+ RLL GY+V V+ + E + + L ERL+
Sbjct: 2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEI-RGLSCEEERLK 60
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
+F+ D + S A+ GC+G+ P + +E ++ V +L++C ++ T
Sbjct: 61 VFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSY-DEKMVDVEVRAAHNVLEACAQTDT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDM---LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
+++VV+TSS + V + ++ +DE WSD ++ RK +W + L+KTL+E+ A
Sbjct: 120 IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW---HALAKTLSEKTAWA 176
Query: 178 FAEEHGLDLVTIIPSFVTGP 197
A + G+++V+I + GP
Sbjct: 177 LAMDRGVNMVSINAGLLMGP 196
|
Length = 297 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 1e-33
Identities = 81/241 (33%), Positives = 108/241 (44%), Gaps = 42/241 (17%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTG TGF+GS L+ LL GY VR VRS D L LP +++ DL +
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRALVRS----GSDAVLLDGLP-----VEVVEGDLTDA 53
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129
S AA+ GC V H+AA + K+ +E + + V GT +L + L++G V+RVV+TSS
Sbjct: 54 ASLAAAMKGCDRVFHLAAFTSLWAKDRKE-LYRTNVEGTRNVLDAALEAG-VRRVVHTSS 111
Query: 130 ASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTI 189
+ + +DET + Y SK LAE LE A E GLD+V +
Sbjct: 112 IAALGGPPDGR--IDETTPWNERPFPND------YYRSKLLAELEVLEAAAE-GLDVVIV 162
Query: 190 IPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN----------ISMVHIDDVARAH 239
PS V GP G T + LN S V + DVA H
Sbjct: 163 NPSAVFGP-------GDEGPTSTGLD-----VLDYLNGKLPAYPPGGTSFVDVRDVAEGH 210
Query: 240 I 240
I
Sbjct: 211 I 211
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 3e-33
Identities = 67/243 (27%), Positives = 96/243 (39%), Gaps = 28/243 (11%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ VTGG GFIGS L+ RLL G+ VR R LS + DL
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVE----------FVVLDL 51
Query: 67 NNPESFDAAIAGC-TGVIHVAAPIDIHGKEPEE--VIIQRAVSGTIGILKSCLKSGTVKR 123
+ + D G VIH+AA + + + V GT+ +L++ +G VKR
Sbjct: 52 TDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKR 110
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
V+ SS S V + +DE Y +SK AE+ +A +G
Sbjct: 111 FVFASSVSVV-YGDPPPLPIDED--------LGPPRPLNPYGVSKLAAEQLLRAYARLYG 161
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY-----SMLLNISMVHIDDVARA 238
L +V + P V GP P L+ V + E V++DDVA A
Sbjct: 162 LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA 221
Query: 239 HIF 241
+
Sbjct: 222 LLL 224
|
Length = 314 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 30/248 (12%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS--DPEQKRDLSFLTNLPRASERLQIFNAD 65
VCVTGG F+G ++ RLL HGYSVR V + D E+ R++ + R+++ + A+
Sbjct: 56 VCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMAN 115
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHG-----KEPEEVIIQRAVSGTIGILKSCLKSGT 120
L PES A GC GV H +A +D G K E+ + + + ++++C+++ +
Sbjct: 116 LTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASEN----VIEACVRTES 171
Query: 121 VKRVVYTSSASTV----HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAAL 176
V++ V+TSS ++ ++DE WSD + R +W Y L K AE+AA
Sbjct: 172 VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW---YALGKLKAEKAAW 228
Query: 177 EFAEEHGLDLVTIIPSFVTGPFICPQLAGSVR----GTLAMVMGNREEYSMLLNISMVHI 232
A GL L TI P+ VTGP G R T+A + G +E + L ++ +
Sbjct: 229 RAARGKGLKLATICPALVTGP-------GFFRRNSTATIAYLKGAQEMLADGL-LATADV 280
Query: 233 DDVARAHI 240
+ +A AH+
Sbjct: 281 ERLAEAHV 288
|
Length = 367 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 6e-26
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ VTGGTGFIGS L+ RLL GY V R + R++ DL
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRS----------ESLNTGRIRFHEGDLT 50
Query: 68 NPESFDAAIAGC--TGVIHVAA--PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+P++ + +A VIH+AA + ++P + I+ V GT+ +L++ ++G VKR
Sbjct: 51 DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPAD-FIRANVLGTLRLLEAARRAG-VKR 108
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
V+ SS+ + + E + L Y +K AER +A +G
Sbjct: 109 FVFASSSEV--YGDVADPPITED-----TPLGPLS----PYAAAKLAAERLVEAYARAYG 157
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM----VHIDDVARAH 239
L V + V GP V L + + +L + + +++DDVARA
Sbjct: 158 LRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAI 217
Query: 240 IF 241
+
Sbjct: 218 LL 219
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-23
Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 10 VTGGTGFIGSWLIMRLLDHG--YSVRT-TVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
VTGG GF+G ++ LL G VR +R PE D S + + D+
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFS-------KLQVITYIEGDV 54
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ + A+ G VIH AA ID+ GK + I++ V GT +L +C+K+G V+ +VY
Sbjct: 55 TDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLVY 113
Query: 127 TSSASTV--HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE---FAEE 181
TSS V + G+ + DET Y SK LAE+ L+ +
Sbjct: 114 TSSMEVVGPNSYGQPIVNGDET-------TPYESTHQDPYPESKALAEKLVLKANGSTLK 166
Query: 182 HGLDLVT--IIPSFVTGPFICPQLAGSVR-----GTLAMVMGNREEYSMLLNISMVHIDD 234
+G L T + P+ + G P L + G G++ S V++ +
Sbjct: 167 NGGRLYTCALRPAGIFGEG-DPFLFPFLVRLLKNGLAKFRTGDKNVLS-----DRVYVGN 220
Query: 235 VARAHI 240
VA AHI
Sbjct: 221 VAWAHI 226
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 2e-20
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
V VTGG+GF G L+ +LL+ G VR+ + P + N ++ D
Sbjct: 1 SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN-------IEFLKGD 53
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ + + A++G V H AA + P ++ + V GT +L +C + G V++ V
Sbjct: 54 ITDRNDVEQALSGADCVFHTAAI--VPLAGPRDLYWEVNVGGTQNVLDACQRCG-VQKFV 110
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
YTSS+S + F G+++ DET + + Y +K +AE LE L
Sbjct: 111 YTSSSSVI-FGGQNIHNGDET-------LPYPPLDSDMYAETKAIAEIIVLEANGRDDLL 162
Query: 186 LVTIIPSFVTGP---FICPQLAGSV-RGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
+ P+ + GP + P L +G + V G + ++ ++A AHI
Sbjct: 163 TCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGNNL-----VDFTYVHNLAHAHI 216
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 4e-20
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 43/247 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR-SDPEQKRDLSFLTNLPRASERLQIFNAD 65
V GG+GF+G L+ +LL G TV D +L P +S R+Q D
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRG---NPTVHVFDIRPTFEL-----DPSSSGRVQFHTGD 52
Query: 66 LNNPESFDAAI--AGCTGVIHVAAPIDIHGKEPE---EVIIQRAVSGTIGILKSCLKSGT 120
L +P+ + A G V H A+P HG + +V +Q GT ++++C K G
Sbjct: 53 LTDPQDLEKAFNEKGPNVVFHTASP--DHGSNDDLYYKVNVQ----GTRNVIEACRKCG- 105
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK-LDIWGKSYKLSKTLAERAALEF- 178
VK++VYTSSAS V F+G+D+ DE+ Y K D +Y +K LAE+ L+
Sbjct: 106 VKKLVYTSSASVV-FNGQDIINGDESL----PYPDKHQD----AYNETKALAEKLVLKAN 156
Query: 179 AEEHGLDLVTIIPSFVTGP---FICPQLAGSVR-GTLAMVMGNREEYSMLLNIS-MVHID 233
E GL + P+ + GP + P L + + G +G+ N+ +++
Sbjct: 157 DPESGLLTCALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGN------NLFDFTYVE 210
Query: 234 DVARAHI 240
+VA AHI
Sbjct: 211 NVAHAHI 217
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 2e-19
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 57/237 (24%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ VTGG GFIGS L+ RLL+ G+ V R D + +
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLD--------------------VVVHL--- 37
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
AA+ V A D P+E + V GT+ +L++ K+G VKR VY
Sbjct: 38 ------AALV------GVPASWD----NPDE-DFETNVVGTLNLLEAARKAG-VKRFVYA 79
Query: 128 SSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLV 187
SSAS V+ S + + +ET R L Y +SK AE + E +GL +V
Sbjct: 80 SSAS-VYGSPEGLPEEEET------PPRPLS----PYGVSKLAAEHLLRSYGESYGLPVV 128
Query: 188 TIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM----VHIDDVARAHI 240
+ + V GP V + ++ + +H+DDV RA +
Sbjct: 129 ILRLANVYGP-GQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAIL 184
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 7e-18
Identities = 68/250 (27%), Positives = 97/250 (38%), Gaps = 61/250 (24%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+V VTG GFIG L+ +LL G VR VR+ N + A+L
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN----------AENAEPSVVL-----AEL 45
Query: 67 NNPESFDAAIAGCTGVIHVAAPI---DIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+ +SF G V+H+AA + + G +P + T + ++ + G VKR
Sbjct: 46 PDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG-VKR 104
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSD-VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
V+ SS V+ G DET D Y SK AERA LE
Sbjct: 105 FVFLSSVK-VNGEGTVGAPFDETDPPAPQDA----------YGRSKLEAERALLELGASD 153
Query: 183 GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM--------------GNREEYSMLLNIS 228
G+++V + P V GP VRG A +M NR S
Sbjct: 154 GMEVVILRPPMVYGP--------GVRGNFARLMRLIDRGLPLPPGAVKNRR--------S 197
Query: 229 MVHIDDVARA 238
+V +D++ A
Sbjct: 198 LVSLDNLVDA 207
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 8e-18
Identities = 74/257 (28%), Positives = 102/257 (39%), Gaps = 56/257 (21%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
RV VTGG GFIGS L+ RLL+ G+ V D +LS NLP ++
Sbjct: 1 RVLVTGGAGFIGSHLVERLLERGHEVIVL---D-----NLSTGKKENLPEVKPNVKFIEG 52
Query: 65 DLNNPESFDAAIAGCTGVIHVAA----PIDIHGKEPE---EVIIQRAVSGTIGILKSCLK 117
D+ + E + A G V H AA P I +P EV V GT+ +L++ K
Sbjct: 53 DIRDDELVEFAFEGVDYVFHQAAQASVPRSIE--DPIKDHEV----NVLGTLNLLEAARK 106
Query: 118 SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAAL 176
+G VKR VY SS+S + DE D+ S Y +SK E
Sbjct: 107 AG-VKRFVYASSSSV--YGDPPYLPKDE------DHP----PNPLSPYAVSKYAGELYCQ 153
Query: 177 EFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM------- 229
FA +GL V++ V GP P G A V+ L
Sbjct: 154 VFARLYGLPTVSLRYFNVYGPRQDPN------GGYAAVIPIF-IERALKGEPPTIYGDGE 206
Query: 230 -----VHIDDVARAHIF 241
+++DV A++
Sbjct: 207 QTRDFTYVEDVVEANLL 223
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 5e-17
Identities = 64/195 (32%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V VTG GFIGS L RLL G+ VR L N +R + D+
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVR--ALDIYNSFNSWGLLDNAVH--DRFHFISGDV 56
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
+ + + C V H+AA I I P ++ V GT+ +L++ KRV
Sbjct: 57 RDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSY-VETNVFGTLNVLEAACVLY-RKRV 114
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAALEFAEEHG 183
V+TS+ S V+ + +DV +DE + YI K +S Y SK A+R A + G
Sbjct: 115 VHTST-SEVYGTAQDV-PIDED--HPLLYINK----PRSPYSASKQGADRLAYSYGRSFG 166
Query: 184 LDLVTIIPSFVT-GP 197
L VTII F T GP
Sbjct: 167 LP-VTIIRPFNTYGP 180
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 2e-14
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+V V G TG +G ++ LLD GY VR VR DP Q L + ++ DL
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVR-DPSQAEKL--------EAAGAEVVVGDL 51
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ ES AA+ G VI A G E V G I ++ + K+G VKR V
Sbjct: 52 TDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYD----GNINLIDAAKKAG-VKRFVL 106
Query: 127 TSS 129
SS
Sbjct: 107 VSS 109
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 3e-14
Identities = 56/254 (22%), Positives = 98/254 (38%), Gaps = 41/254 (16%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN-- 67
VTGGTGF+G L+ RLL++G+ V VRS+ + + ++R+++ DL
Sbjct: 3 VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEA-HERIEEAGLEADRVRVLEGDLTQP 61
Query: 68 ----NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+ + VIH AA D + P E + + GT +L+ + +R
Sbjct: 62 NLGLSAAASRELAGKVDHVIHCAASYDF--QAPNEDAWRTNIDGTEHVLELAARLDI-QR 118
Query: 124 VVYTSSASTVHFSGKDVDML--DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
Y S+A V ++++ + Y+ SK AE+ A +
Sbjct: 119 FHYVSTAY--------VAGNREGNIRETELNPGQNFKNP---YEQSKAEAEQLVRAAATQ 167
Query: 182 HGLDLVTIIPSFVTGPFICPQLAGSVRG-----TLAMVMGNREEYS-MLLN----ISMVH 231
+ L PS V G G + L ++ + M N +++V
Sbjct: 168 --IPLTVYRPSIVVG----DSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVP 221
Query: 232 IDDVARA--HIFFT 243
+D VA A ++
Sbjct: 222 VDYVADAIVYLSKK 235
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 6e-14
Identities = 62/259 (23%), Positives = 94/259 (36%), Gaps = 45/259 (17%)
Query: 10 VTGGTGFIGSWLIMRLLD--HGYSVRTTVR-SDPEQKRD-------LSFLTNLPRASERL 59
+TG TGF+G L+ +LL + VR D E + L + +A ER+
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60
Query: 60 QIFNADLNNP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILK 113
DL+ P E F +IH AA ++ EP + V GT +L+
Sbjct: 61 IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAA--TVNFVEPYSDLRATNVLGTREVLR 118
Query: 114 SCLKSGTVKRVVYTSSA---STVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTL 170
K + S+A ++ + + L Y SK L
Sbjct: 119 LA-KQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPAL-----LGGLPNGYTQSKWL 172
Query: 171 AERAALEFAEEHGLDLVTIIPSFVTGP----------FICPQLAGSV-RGTLAMVMGNRE 219
AE+ E A GL +V PS +TG F L G G L ++G+ +
Sbjct: 173 AEQLVREAAG--GLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPD 230
Query: 220 EYSMLLNISMVHIDDVARA 238
+ +V +D VA A
Sbjct: 231 A-----RLDLVPVDYVANA 244
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 1e-13
Identities = 53/238 (22%), Positives = 81/238 (34%), Gaps = 37/238 (15%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ VTG G +G L RL V D + + +++ D+
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPR-VIGVDGLDRRRPPG---------SPPKVEYVRLDIR 50
Query: 68 NPESFDA-AIAGCTGVIHVAAPIDIHGKEPEEVIIQRA-VSGTIGILKSCLKSGTVKRVV 125
+P + D V+H+A I + R V GT +L +C +G V RVV
Sbjct: 51 DPAAADVFREREADAVVHLAF---ILDPPRDGAERHRINVDGTQNVLDACAAAG-VPRVV 106
Query: 126 YTSSASTVHFSGKDVDMLDETF----WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
TSS + + L E + Y R K E+ EF
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRD-----------KAEVEQLLAEFRRR 155
Query: 182 H-GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
H L++ + P+ + GP + V G + +H DDVARA
Sbjct: 156 HPELNVTVLRPATILGPGTRNTTRDFLSPRRLPVPGGFD-----PPFQFLHEDDVARA 208
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-13
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 30/245 (12%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTGG GF+G +I LL+ ++ D +L + + D+ +
Sbjct: 4 VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKDL 63
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129
A G + VIH AA +D+ G E + + V+GT +L++C+++ VKR+VYTSS
Sbjct: 64 SFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNN-VKRLVYTSS 122
Query: 130 ASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE---FAEEHGLDL 186
+ K ++ V+ D Y SK LAE L + G L
Sbjct: 123 IEVAGPNFK-----GRPIFNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGYL 177
Query: 187 VT--IIPSFVTG---PFI------CPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDV 235
VT + P ++ G F+ G + + N +V++ +V
Sbjct: 178 VTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFPRIKGSGVN----------PLVYVGNV 227
Query: 236 ARAHI 240
A AHI
Sbjct: 228 AWAHI 232
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-13
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 32/200 (16%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-----LTNLPRA-SERLQI 61
V VTG GFIGS L+ L+ GY VR V + SF L P +++++
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAFVLYN-------SFNSWGWLDTSPPEVKDKIEV 53
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
D+ +P+S A+ GC V H+AA I I + + + V+GT+ +L++ G
Sbjct: 54 VTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDLG- 112
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAALEFA 179
V++VV+TS+ S V+ + + V +DE K + G+S Y SK A++ AL F
Sbjct: 113 VEKVVHTST-SEVYGTAQYVP-IDE----------KHPLQGQSPYSASKIGADQLALSF- 159
Query: 180 EEHGLDL-VTIIPSFVT-GP 197
+ VTII F T GP
Sbjct: 160 -YRSFNTPVTIIRPFNTYGP 178
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 7e-13
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 33/158 (20%)
Query: 10 VTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN 68
V G TG G ++ LL G+ VR R DP + A+ +++ DL++
Sbjct: 3 VFGATGKQGGSVVRALLKDPGFKVRALTR-DPSSPAAKA------LAAPGVEVVQGDLDD 55
Query: 69 PESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128
PES +AA+ G GV V G E E I + ++ + ++G V+ V++S
Sbjct: 56 PESLEAALKGVYGVFLV-TDFWEAGGEDE---IAQG----KNVVDAAKRAG-VQHFVFSS 106
Query: 129 SAST-------VHFSGKDVDMLDETFWSDVDYIRKLDI 159
HF K +YIR +
Sbjct: 107 VPDVEKLTLAVPHFDSK---------AEVEEYIRASGL 135
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 2e-12
Identities = 41/230 (17%), Positives = 64/230 (27%), Gaps = 58/230 (25%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
V G TG G L+ LL G+ V R+ + + + DL +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSKA------------PAPGVTPVQKDLFDL 50
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129
A+AG V+ + + G +L + ++G V+R+V S+
Sbjct: 51 ADLAEALAGVDAVVDAFGA---RPDDSD---------GVKHLLDAAARAG-VRRIVVVSA 97
Query: 130 AST-VHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVT 188
A G F Y +K AE GLD
Sbjct: 98 AGLYRDEPGTFRLDDAPLF--------------PPYARAKAAAEEL----LRASGLDWTI 139
Query: 189 IIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ P + G+ S + DVA A
Sbjct: 140 VRPGALFDEEGETYEIGTEGDPAGE--------------SSISRADVAAA 175
|
Length = 182 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 4e-12
Identities = 58/245 (23%), Positives = 88/245 (35%), Gaps = 65/245 (26%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V V G TGFIG +++ RL G V R + R L + +L ++ DL
Sbjct: 2 VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEA-YARRLLVMGDLG----QVLFVEFDL 56
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRA-------VSGTIGILKSCLKSG 119
+ ES A+ G VI++ G+ E + V G + K+ ++G
Sbjct: 57 RDDESIRKALEGSDVVINLV------GRLYE----TKNFSFEDVHVEGPERLAKAAKEAG 106
Query: 120 TVKRVVYTSSASTVHFS--GKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
V+R+ +H S G D + S Y+R SK E A E
Sbjct: 107 -VERL--------IHISALGADAN-------SPSKYLR-----------SKAEGEEAVRE 139
Query: 178 FAEEHGLDLVTII-PSFVTGP---FICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHID 233
E TI+ PS V G F+ ++G + V++
Sbjct: 140 AFPEA-----TIVRPSVVFGREDRFLNRFAKLLAFLPFPPLIGGGQTK-----FQPVYVG 189
Query: 234 DVARA 238
DVA A
Sbjct: 190 DVAEA 194
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-11
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 32/253 (12%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD--HGYSVRTTVRSDPEQKRDLSFLTNLPR-------ASE 57
V +TG TGF+G++L++ LLD V VR+ ++ +++
Sbjct: 2 NVLLTGATGFLGAYLLLELLDRSDA-KVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60
Query: 58 RLQIFNADLNNP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGI 111
R+++ DL P ++ +IH AA ++ P + V GT +
Sbjct: 61 RVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAA--LVNHVFPYSELRGANVLGTAEV 118
Query: 112 LKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLA 171
L+ +G K + Y SS S + F Y SK +A
Sbjct: 119 LRLAA-TGKPKPLHYVSSISV--GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVA 175
Query: 172 ERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGS------VRGTLAMVMGNREEYSMLL 225
E+ E A + GL + P ++TG L V G L + + EYS+
Sbjct: 176 EKLVRE-AGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSL-- 232
Query: 226 NISMVHIDDVARA 238
M+ +D VARA
Sbjct: 233 --DMLPVDHVARA 243
|
Length = 382 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
RV + GG GFIGS L+ LL+ G VR RS P + L + D
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLG----------GVDYIKGDY 50
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVI-IQRAVSGTIGILKSCLKSGTVKRVV 125
N ++A+ G VIH+A+ + ++ IQ V+ T+ +L++C +G + +++
Sbjct: 51 ENRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAG-IGKII 109
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
+ SS TV + + + E+ D + SY +SK E+ + +GLD
Sbjct: 110 FASSGGTV-YGVPEQLPISES-----DPTLPI----SSYGISKLAIEKYLRLYQYLYGLD 159
Query: 186 LVTIIPSFVTGPFICPQLAGSVRGTLAMVMG---NREEYSMLLNISMV----HIDDVARA 238
+ S GP Q +G + + + E + + + +IDD+ A
Sbjct: 160 YTVLRISNPYGPG---QRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEA 216
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 5e-11
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPR-ASERLQIFN 63
+V VTGG G+IGS ++ LL+ GY V V D +LS LPR R++ +
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEAGYDV---VVLD-----NLSNGHREALPRIEKIRIEFYE 52
Query: 64 ADLNNPESFDAAIA--GCTGVIHVAAPIDIHGKEPEEVII-----QRAVSGTIGILKSCL 116
D+ + + D A VIH AA + E V V GT+ +L++
Sbjct: 53 GDIRDRAALDKVFAEHKIDAVIHFAALKAV----GESVQKPLKYYDNNVVGTLNLLEAMR 108
Query: 117 KSGTVKRVVYTSSAST 132
G VK V++SSA+
Sbjct: 109 AHG-VKNFVFSSSAAV 123
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 7e-11
Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 56/246 (22%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL-----QI 61
+V VTG TGFIGS ++ L+ G+ V RSD + +L Q+
Sbjct: 2 KVFVTGATGFIGSAVVRELVAAGHEVVGLARSD--------------AGAAKLEAAGAQV 47
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQ--RAVSGTIGILKSCLKSG 119
DL + + A A VIH+A H + + R I L L+ G
Sbjct: 48 HRGDLEDLDILRKAAAEADAVIHLAF---THDFDNFAQACEVDRRA---IEALGEALR-G 100
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
T K ++YTS + +G + + ++ ++E AALE A
Sbjct: 101 TGKPLIYTSGIWLLGPTGGQEEDEEAPD-------------DPPTPAARAVSEAAALELA 147
Query: 180 EEHGLDLVTIIPSFVTGP----FICPQLAGSVRGTLAMVMG---NREEYSMLLNISMVHI 232
E V +P V G F+ +A + ++ +G NR VH
Sbjct: 148 ERGVRASVVRLPPVVHGRGDHGFVPMLIAIAREKGVSAYVGDGKNR--------WPAVHR 199
Query: 233 DDVARA 238
DD AR
Sbjct: 200 DDAARL 205
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 3e-10
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ VTGG GFIGS L+ RLL+ G V D + ++ + DL
Sbjct: 1 RILVTGGAGFIGSHLVDRLLEEGNEVVVV---DNLSSGRRENI-EPEFENKAFRFVKRDL 56
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPE-EVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ A V H+AA D+ + ++ ++ V T +L++ +G VKR+V
Sbjct: 57 LDTADKVAKK-DGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRIV 114
Query: 126 YTSSASTV 133
+ SS STV
Sbjct: 115 FASS-STV 121
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-10
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
V +TGG G+ G L L G V P+Q LP E ++ AD+
Sbjct: 2 VLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQ--------ELP---EGIKFIQADVR 50
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEP--EEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ + A+AG V H+A+ + G+E E+I + V GT I++ C++ V R++
Sbjct: 51 DLSQLEKAVAGVDCVFHIAS-YGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVPRLI 108
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
YTS+ + + F G+ + DE+ + Y+ LD+ Y +K++AE+ L+ A L
Sbjct: 109 YTSTFNVI-FGGQPIRNGDES----LPYL-PLDLHVDHYSRTKSIAEQLVLK-ANNMPLP 161
Query: 186 -----LVTII--PSFVTGP---FICPQLAGSV-RGTLAMVMGNREEYSMLLNISMVHIDD 234
L T P+ + GP P++ + +G V G+ + + VH+D+
Sbjct: 162 NNGGVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFMFVYGDPK-----SLVEFVHVDN 216
Query: 235 VARAHI 240
+ +AHI
Sbjct: 217 LVQAHI 222
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 4e-10
Identities = 41/192 (21%), Positives = 67/192 (34%), Gaps = 33/192 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ + GGT FIG L+ LL G+ V R P E ++ D
Sbjct: 2 KILIIGGTRFIGKALVEELLAAGHDVTVFNRG-----------RTKPDLPEGVEHIVGDR 50
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
N+ ++ + + G +D P +V + K G VK+ ++
Sbjct: 51 NDRDALEELLGG----EDFDVVVDTIAYTPRQVER------ALDAFK-----GRVKQYIF 95
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SSAS G+ + + T + D + D W Y K AE E
Sbjct: 96 ISSASVYLKPGRVIT--ESTPLREPDAVGLSDPW--DYGRGKRAAEDVL---IEAAAFPY 148
Query: 187 VTIIPSFVTGPF 198
+ P ++ GP
Sbjct: 149 TIVRPPYIYGPG 160
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 6e-10
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
V VTG TG++G L+ RLL G+ VR VRS PE+ D + SER+ + DL
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRS-PEKLADRPW-------SERVTVVRGDLE 52
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+PES AA+ G ++ +H + ++ +G VKR++Y
Sbjct: 53 DPESLRAALEGIDTAYYL-----VHSMGSGGDFEEADRRAARNFARAARAAG-VKRIIYL 106
Query: 128 SS 129
Sbjct: 107 GG 108
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 59/270 (21%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTT--VR--SDPEQKRDL-------SFLTNLPRA 55
V +TG TGF+G++L+ LL + VR + L
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60
Query: 56 SERLQIFNADLNNP-------------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQ 102
R+++ DL+ P E D +IH A +++ P E +
Sbjct: 61 LSRIKVVVGDLSKPNLGLSDDDYQELAEEVDV-------IIHNGA--NVNWVYPYEELKP 111
Query: 103 RAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162
V GT +LK +G +K + + S+ S FS ++ + LD+ D + +
Sbjct: 112 ANVLGTKELLKLAA-TGKLKPLHFVSTLSV--FSAEEYNALDDEE--SDDMLESQNGLPN 166
Query: 163 SYKLSKTLAERAALEFAEEHGLDLVTII-PSFVTG----------PFICPQLAGSVRGTL 211
Y SK +AE+ E A GL V II P + G F L G ++ +
Sbjct: 167 GYIQSKWVAEKLLREAANR-GLP-VAIIRPGNIFGDSETGIGNTDDFFWRLLKGCLQLGI 224
Query: 212 AMVMGNREEYSMLLNISMVHIDDVARAHIF 241
+ G + + +D VARA +
Sbjct: 225 YPISGA--------PLDLSPVDWVARAIVK 246
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 43/240 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ +TGGTGFIG L RL G+ V R + + +T
Sbjct: 1 KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEVIT---------------W 45
Query: 67 NNPESFDAAIAGCTGVIHVA-APIDIHGKEPE--EVIIQRAVSGTIGILKSCLKSGTVKR 123
+ + G VI++A PI + I+ + T +L + +
Sbjct: 46 DGLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIEST-RVLVEAIANAPAPP 104
Query: 124 VVYTSSASTVHFSG--KDVDMLDETFWSDVDYIRKL-DIWGKSYKLSKTLAERAALEFAE 180
V SAS V + G D ++L E S D++ ++ W E+AA A
Sbjct: 105 KVLI-SASAVGYYGHSGD-EVLTENSPSGKDFLAEVCKAW-----------EKAAQP-AS 150
Query: 181 EHGLDLVTIIPSFVTGPF--ICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
E G +V + V GP P++ R L +G+ ++ +S +HIDD+ R
Sbjct: 151 ELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQW-----MSWIHIDDLVRL 205
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 5e-09
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI--FNA 64
+V VTGG G+IGS + +LL G+ V V D +LS A +LQ +
Sbjct: 2 KVLVTGGAGYIGSHTVRQLLKTGHEV---VVLD-----NLS--NGHKIALLKLQFKFYEG 51
Query: 65 DLNNPESFDAAIA--GCTGVIHVAAPIDIHGKEPEEVIIQRA-----VSGTIGILKSCLK 117
DL + A V+H AA I + E V V GT+ ++++ L+
Sbjct: 52 DLLDRALLTAVFEENKIDAVVHFAASISV----GESVQNPLKYYDNNVVGTLNLIEAMLQ 107
Query: 118 SGTVKRVVYTSSAST 132
+G VK+ +++S+A+
Sbjct: 108 TG-VKKFIFSSTAAV 121
|
Length = 329 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 9e-09
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
++ VTG TGF+G ++ LL G+ VR VR +PE + +++ D
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEA---------AAALAGGVEVVLGD 50
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAV 105
L +P+S A G GV+ ++ + G + + AV
Sbjct: 51 LRDPKSLVAGAKGVDGVLLISGL--LDGSDAFRAVQVTAV 88
|
Length = 275 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 22/136 (16%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRT---TVRSDPEQKRDLSFLTNLPRASERLQIFN 63
++ VTGG G+IGS + +LL+ G+ V E +T +
Sbjct: 1 KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT-------FVE 53
Query: 64 ADLNNPESFDAAIAG--CTGVIHVAAPIDIHGKEPEEVII-----QRAVSGTIGILKSCL 116
DL + E D VIH A I + E V + V GT+ +L++
Sbjct: 54 GDLRDRELLDRLFEEHKIDAVIHFAGLIAV----GESVQKPLKYYRNNVVGTLNLLEAMQ 109
Query: 117 KSGTVKRVVYTSSAST 132
++G VK+ +++SSA+
Sbjct: 110 QAG-VKKFIFSSSAAV 124
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-08
Identities = 63/262 (24%), Positives = 98/262 (37%), Gaps = 53/262 (20%)
Query: 8 VCVTGGTGFIGSWLIMRLLD--HGYSVRTTVRSDPEQKRDLSFLTNLPR--------ASE 57
V +TG TGF+G++L+ LL V VR+ E+ L A E
Sbjct: 2 VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLARE 61
Query: 58 RLQIFNADLNNP-------------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRA 104
R+++ DL+ P E+ D ++H A ++ E ++ A
Sbjct: 62 RIEVVAGDLSEPRLGLSDAEWERLAENVDT-------IVHNGALVN-WVYPYSE--LRGA 111
Query: 105 -VSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163
V GT +L+ SG K + Y S+ S G +D+ T G
Sbjct: 112 NVLGTREVLRLAA-SGRAKPLHYVSTISV----GAAIDLSTVTEDDATVTPPPGLAGG-- 164
Query: 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGS------VRGTLAM-VMG 216
Y SK +AE E A + GL + + P + G + S V+G LA+
Sbjct: 165 YAQSKWVAELLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP 223
Query: 217 NREEYSMLLNISMVHIDDVARA 238
E + + +D VARA
Sbjct: 224 QSPELTED----LTPVDFVARA 241
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-08
Identities = 53/200 (26%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R VTG GFIGS L RL G+ VR PE +T E DL
Sbjct: 2 RALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPE------HMTQPTDDDEFHL---VDL 52
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHG----KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
E+ A G V H+AA D+ G + VI+ +L++ +G V+
Sbjct: 53 REMENCLKATEGVDHVFHLAA--DMGGMGYIQSNHAVIMYNNTLINFNMLEAARING-VE 109
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW----GKSYKLSKTLAERAALEF 178
R ++ SSA V+ K ++ + V +R+ D W +Y K ER +
Sbjct: 110 RFLFASSA-CVYPEFKQLE-------TTVVRLREEDAWPAEPQDAYGWEKLATERLCQHY 161
Query: 179 AEEHGLDLVTIIPSFVTGPF 198
E++G++ + + GP
Sbjct: 162 NEDYGIETRIVRFHNIYGPR 181
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ +TGG GF+GS L RLL+ G+ V +KR++ L P + D+
Sbjct: 2 RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHP----NFEFIRHDV 57
Query: 67 NNPE--SFDAAIAGCTGVIHVAAPID-IHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
P D + H+A P +H + ++ V GT+ +L + G R
Sbjct: 58 TEPLYLEVDQ-------IYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA--R 108
Query: 124 VVYTSSAS-----TVHFSGKDVDMLDETFWSDVDYI--RKLDIWGKSYKLSKTLAERAAL 176
V+ S++ VH E++W +V+ I R Y K +AE +
Sbjct: 109 VLLASTSEVYGDPEVHPQ-------PESYWGNVNPIGPR------SCYDEGKRVAETLCM 155
Query: 177 EFAEEHGLDLVTIIPSFVT-GPFICP 201
+ +HG+D V I F T GP + P
Sbjct: 156 AYHRQHGVD-VRIARIFNTYGPRMHP 180
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 21/127 (16%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTG TG +G+ ++ LL SV VR +PE+ + A++ +++ D ++P
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVR-NPEKAKA--------FAADGVEVRQGDYDDP 53
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129
E+ + A G ++ ++ + + I A ++G VK +VY S+
Sbjct: 54 ETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAK-----------QAG-VKHIVYLSA 101
Query: 130 ASTVHFS 136
+ S
Sbjct: 102 SGADEDS 108
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD-----HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
RV VTG TGF GSWL + L + GYS+ DP +L L NL ++
Sbjct: 6 RVLVTGHTGFKGSWLSLWLQELGAKVIGYSL------DPPTNPNLFELANL---DNKISS 56
Query: 62 FNADLNNPESFDAAIAGCTG--VIHVAA-PI-DIHGKEPEEVIIQRAVSGTIGILKSCLK 117
D+ + + AI V H+AA P+ + K+P E + V GT+ +L++ +
Sbjct: 57 TRGDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVET-FETNVMGTVNLLEAIRE 115
Query: 118 SGTVKRVVYTSS 129
+G+VK VV +S
Sbjct: 116 TGSVKAVVNVTS 127
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLD-----HGYSVRTTVRSDPEQKRDLSFLTNLPRASER 58
+ +V VTG TGF GSWL + LL+ +GYS DP +L L NL A +
Sbjct: 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYS------LDPPTSPNLFELLNL--AKKI 54
Query: 59 LQIFNADLNNPESFDAAIAGCTG--VIHVAA-PIDIHG-KEPEEVIIQRAVSGTIGILKS 114
F D+ + AIA V H+AA P+ +P E + V GT+ +L++
Sbjct: 55 EDHF-GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLET-FETNVMGTVNLLEA 112
Query: 115 CLKSGTVKRVV 125
G+VK VV
Sbjct: 113 IRAIGSVKAVV 123
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-08
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ + G TGFIG L LL+ G+ V VR+ LS P A DL
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKR----LSKEDQEPVAVVE-----GDLR 51
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+ +S A+ G VIH+A ++ EV ++ GT +L++ K VK ++
Sbjct: 52 DLDSLSDAVQGVDVVIHLAGA-PRDTRDFCEVDVE----GTRNVLEAA-KEAGVKHFIFI 105
Query: 128 SSAS 131
SS
Sbjct: 106 SSLG 109
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 23/131 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNL-------PRASERL 59
+V +TG +GF+G L RLL SD +R L + P + R+
Sbjct: 2 KVLITGASGFVGQRLAERLL-----------SDVPNER----LILIDVVSPKAPSGAPRV 46
Query: 60 QIFNADLNNPESFDAAIAG-CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
DL P +A G V H+AA + + ++ + V GT +L++ K+
Sbjct: 47 TQIAGDLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKN 106
Query: 119 GTVKRVVYTSS 129
G R V+TSS
Sbjct: 107 GPKPRFVFTSS 117
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 4e-07
Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 19/206 (9%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD--PEQKRDLSFLTNLPRASERLQIFNA 64
RV +TGG GFIGS L L G+ V + +L++L R ++ +
Sbjct: 2 RVLITGGAGFIGSNLARFFLKQGWEV-IGFDNLMRRGSFGNLAWLKA-NREDGGVRFVHG 59
Query: 65 DLNNPESFDAAIAGCTGVIHVAA--PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
D+ N + +IH AA + P A+ GT+ +L++ +
Sbjct: 60 DIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQHAPNA 118
Query: 123 RVVYTSSASTVH--FSGKDVDMLDETFWSDVDYIRK---------LDIWGKSYKLSKTLA 171
++TS+ + V+ ET + LD Y SK A
Sbjct: 119 PFIFTST-NKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAA 177
Query: 172 ERAALEFAEEHGLDLVTIIPSFVTGP 197
++ E+ GL V +TGP
Sbjct: 178 DQYVQEYGRIFGLKTVVFRCGCLTGP 203
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 4e-07
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 20/124 (16%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+ VTG TG G +I LL G S VR VR + E+ L A + +++ D
Sbjct: 1 IAVTGATGQQGGSVIRHLLAKGASQVRAVVR-NVEKAATL--------ADQGVEVRQGDY 51
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
N PE A AG + + + P H E+ + V+ + ++G K +
Sbjct: 52 NQPELLQKAFAGASKLFIITGP---HYDNTLEIKQGKNVA------DAARRAGV-KHIYS 101
Query: 127 TSSA 130
T A
Sbjct: 102 TGYA 105
|
Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ +TGGTGFIG L RL G+ V RS P D +
Sbjct: 1 ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYK--------PWAGEDAD 52
Query: 68 NPESFDAAI--AG 78
+ E DA I AG
Sbjct: 53 SLEGADAVINLAG 65
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT---VRSDPEQKRDLSFLTNLPRASE 57
M + VTGG G+IGS +++LL GY V S E R + L +
Sbjct: 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELA--GDLGD 58
Query: 58 RLQIFNADLNNPESFDAAIAGCT--GVIHVA 86
L DL + E+ + A VIH A
Sbjct: 59 NLVFHKVDLRDKEALEKVFASTRFDAVIHFA 89
|
Length = 352 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ V G TG+ G ++ L G+ VR VR DP+ + S + +++ DL+
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVR-DPKSELAKSL------KAAGVELVEGDLD 53
Query: 68 NPESFDAAIAGCTGVI 83
+ ES A+ G V
Sbjct: 54 DHESLVEALKGVDVVF 69
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 54/208 (25%), Positives = 79/208 (37%), Gaps = 41/208 (19%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTV------RSDPEQKRDLSFLTNLPRASERLQ 60
++ VTGG GFIGS + LL+ + + E D+S +S R +
Sbjct: 2 KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVS-------SSPRYR 54
Query: 61 IFNADLNNPESFDAAIA--GCTGVIHVAAP--IDIHGKEPEEVIIQRAVSGTIGILKSCL 116
D+ + E D VIH AA +D +PE I+ V GT +L++
Sbjct: 55 FVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPF-IRTNVLGTYTLLEAAR 113
Query: 117 KSGTVKRVVYTSSAST--VHFSGKDVDMLDETFWSDVDYIRKLDIWGKS----YKLSKTL 170
K G VKR V+ ST V+ D ET + Y SK
Sbjct: 114 KYG-VKRFVHI---STDEVYGDLLDDGEFTET-------------SPLAPTSPYSASKAA 156
Query: 171 AERAALEFAEEHGLDLVTIIPSFVTGPF 198
A+ + +GL +V S GP+
Sbjct: 157 ADLLVRAYHRTYGLPVVITRCSNNYGPY 184
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 54/255 (21%), Positives = 91/255 (35%), Gaps = 55/255 (21%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTT---VRSD---PEQKR--------DLSFLTNL 52
V +TG TGF+G L+ +LL + +R ++R NL
Sbjct: 2 SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61
Query: 53 -PRASERLQIFNADLNNP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAV 105
P ++ DL+ P E I +IH AA + E + + V
Sbjct: 62 NPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTF--DERLDEALSINV 119
Query: 106 SGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS-------DVDYIRKLD 158
GT+ +L+ + +K V+ S+A + D +++E + +D + +D
Sbjct: 120 LGTLRLLELAKRCKKLKAFVHVSTA----YVNGDRQLIEEKVYPPPADPEKLIDILELMD 175
Query: 159 -------------IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG----PFICP 201
+Y +K LAER L+ L LV + PS V PF P
Sbjct: 176 DLELERATPKLLGGHPNTYTFTKALAERLVLKERG--NLPLVIVRPSIVGATLKEPF--P 231
Query: 202 QLAGSVRGTLAMVMG 216
+ G + +
Sbjct: 232 GWIDNFNGPDGLFLA 246
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-05
Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 30/188 (15%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
+ G TG GS ++ L G+ V VR LP E+L++ D+ +
Sbjct: 4 IIGATGRTGSAIVREALARGHEVTALVRDP----------AKLPAEHEKLKVVQGDVLDL 53
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129
E A+ G V I G + GT I+ S +K+ VKR++
Sbjct: 54 EDVKEALEGQDAV------ISALGTRNDLSPTTLHSEGTRNIV-SAMKAAGVKRLIVVGG 106
Query: 130 ASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTI 189
A S D T D + + L+ E GLD +
Sbjct: 107 A----GSLDDRP--KVTLVLDTLLFPP--ALRRVAE-----DHARMLKVLRESGLDWTAV 153
Query: 190 IPSFVTGP 197
P +
Sbjct: 154 RPPALFDG 161
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 4e-05
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF 62
EK R+C+TG GFI S + RL G+ + + SD K++ ++ F
Sbjct: 19 SEKLRICITGAGGFIASHIARRLKAEGHYI---IASD--WKKN-EHMSE----DMFCHEF 68
Query: 63 N-ADLNNPESFDAAIAGCTGVIHVAAPIDIHG----KEPEEVIIQRAVSGTIGILKSCLK 117
+ DL E+ G V ++AA D+ G + VI+ + +L++
Sbjct: 69 HLVDLRVMENCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMYNNTMISFNMLEAARI 126
Query: 118 SGTVKRVVYTSSA 130
+G VKR Y SSA
Sbjct: 127 NG-VKRFFYASSA 138
|
Length = 370 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN----LPRASERLQIF 62
R +TG TG GS+L LL+ GY V VR R SF T+ L +R+ +
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVR------RSSSFNTDRIDHLYINKDRITLH 54
Query: 63 NADLNNPESFDAAIA 77
DL + S AI
Sbjct: 55 YGDLTDSSSLRRAIE 69
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 9e-05
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
V G +G IG + L G+ VR RS + ++I AD +
Sbjct: 4 VLGASGPIGREVARELRRRGWDVRLVSRS---GSK--------LAWLPGVEIVAADAMDA 52
Query: 70 ESFDAAIAGCTGVIHVAAPI 89
S AA G + H A P
Sbjct: 53 SSVIAAARGADVIYHCANPA 72
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 9e-05
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 22/145 (15%)
Query: 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV---RSDPEQKRDLSFLTNLPRASERLQIF 62
G +TGG G +G L L + G R V RS P+ + L L A R+ +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERG--ARRLVLLSRSGPDAPGAAALLAELEAAGARVTVV 58
Query: 63 NADLNNPESFDAAIAGC-------TGVIHVAAPID---IHGKEPEEVIIQRA----VSGT 108
D+ + ++ A +A TGVIH A +D + PE +G
Sbjct: 59 ACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERF--AAVLAPKAAGA 116
Query: 109 IGILKSCLKSGTVKRVVYTSSASTV 133
L + V SS + V
Sbjct: 117 W-NLHELTADLPLDFFVLFSSIAGV 140
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 13/133 (9%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSV----RTTVRSDPEQKRD-LSFLTNLPRASERLQI 61
++ VTG GFIG + RLL+ G V D K L L
Sbjct: 2 KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFK----F 57
Query: 62 FNADLNNPESFD--AAIAGCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKS 118
DL + E+ VIH+AA + + E + + G + +L+ C +
Sbjct: 58 VKGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELC-RH 116
Query: 119 GTVKRVVYTSSAS 131
VK +VY SS+S
Sbjct: 117 FGVKHLVYASSSS 129
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTG TG IGS + LL+ G VR VRSD + R +E + DL++P
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAA------RGAE---VVVGDLDDP 53
Query: 70 ESFDAAIAGCTGVIHVAAPID 90
AA+AG V AP
Sbjct: 54 AVLAAALAGVDAV-FFLAPPA 73
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
V G TG +G ++ + LD GY VR VR+ R SFL ++ DL+ P
Sbjct: 5 VIGATGTLGRQIVRQALDEGYQVRCLVRN----LRKASFLKEWG-----AELVYGDLSLP 55
Query: 70 ESFDAAIAGCTGVI----------HVAAPIDIHGK 94
E+ + G T +I + A ID GK
Sbjct: 56 ETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGK 90
|
Length = 317 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTV----RS--DPEQKRDLSFLTNLPRASERLQIFN 63
VTGG G IG L L + RS PE++ L L R+ +
Sbjct: 210 VTGGAGGIGRALARALARR---YGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYIS 266
Query: 64 ADLNNPESFDAAIA-------GCTGVIHVAAPID---IHGKEPEEV--IIQRAVSGTIGI 111
AD+ + + + GVIH A + + K E+ ++ V G + +
Sbjct: 267 ADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNL 326
Query: 112 LKSCLKSGTVKRVVYTSSAS 131
+ L + V SS S
Sbjct: 327 AQ-ALADEPLDFFVLFSSVS 345
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 9e-04
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV---RSDPEQKRDLSFLTNLPRASERLQIF 62
G VTGG G +G L L + G R V RS + L L + +
Sbjct: 1 GTYLVTGGLGGLGLELARWLAERG--ARHLVLLSRSGAPDPEAEALLAELEARGAEVTVV 58
Query: 63 NADLNNPESFDAAIAGC-------TGVIHVAA 87
D+++ ++ A +A GVIH A
Sbjct: 59 ACDVSDRDAVRALLAEIRADGPPLRGVIHAAG 90
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 10 VTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPR--ASERLQIFNAD 65
VTGGTGFIG L+ RLLD +V VR + L L ++R+ D
Sbjct: 5 VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR-----LEALAAYWGADRVVPLVGD 59
Query: 66 LNNP-----ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGT 108
L P E+ A + V+H+AA D+ EE V GT
Sbjct: 60 LTEPGLGLSEADIAELGDIDHVVHLAAIYDL--TADEEAQRAANVDGT 105
|
Length = 657 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.001
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+V +TGG G IGS LI LL+ G+ V + + +R+ +LP L + +
Sbjct: 2 KVLITGGAGQIGSHLIEHLLERGHQV-VVIDNFATGRRE-----HLP-DHPNLTVVEGSI 54
Query: 67 NNPESFDAAIAGC--TGVIHVAAPIDIHGKEPEEVI--IQRAVSGTIGILKSCLKSGTVK 122
+ D V+H AA K+P++ V G ++++ K+G VK
Sbjct: 55 ADKALVDKLFGDFKPDAVVHTAAAY----KDPDDWYEDTLTNVVGGANVVQAAKKAG-VK 109
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
R++Y +A + + K M +D+ R G SY +SKT E + E
Sbjct: 110 RLIYFQTA--LCYGLK--PMQQPIR---LDHPRAPP--GSSYAISKTAGE----YYLELS 156
Query: 183 GLDLVTIIPSFVTGP 197
G+D VT + VTGP
Sbjct: 157 GVDFVTFRLANVTGP 171
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.001
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ VTGG GF+GS L+ +L+ G V +K +L L P R ++ D+
Sbjct: 122 RIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNP----RFELIRHDV 177
Query: 67 NNPESFDAAIAGCTGVIHVAAPID-IHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV- 124
P + + H+A P +H K I+ V GT+ +L G KRV
Sbjct: 178 VEPILLEV-----DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML------GLAKRVG 226
Query: 125 --VYTSSASTVHFSGKDVDM-LDETFWSDVDYIRKLDIWGKSYKLSKTLA 171
+S S V+ G ++ ET+W +V+ I + + + + ++TLA
Sbjct: 227 ARFLLTSTSEVY--GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLA 274
|
Length = 436 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS 47
+ +TGGTG IG L RL G+ V R P+ ++L
Sbjct: 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH 40
|
Length = 297 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQ---KRDLSFLTNLPRASERLQIF 62
+ VTGG G IGS L+ ++L G + R + + R+L +L+
Sbjct: 4 TILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHD----KLRFI 59
Query: 63 NADLNNPESFDAAIA--GCTGVIHVAA--PIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
D+ + E A G V H AA + PEE I+ V GT ++ + +++
Sbjct: 60 IGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEA-IKTNVLGTKNVIDAAIEN 118
Query: 119 GTVKRVVYTSS 129
G V++ V S+
Sbjct: 119 G-VEKFVCIST 128
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.003
Identities = 38/178 (21%), Positives = 57/178 (32%), Gaps = 57/178 (32%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL-----QIFNA 64
VTGG GFIGS L+ L + G D+ + NL R + +
Sbjct: 3 VTGGAGFIGSNLVKALNERG-------------ITDILVVDNL-RDGHKFLNLADLVIAD 48
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTI--------------- 109
++ + D G G + E + Q A S T
Sbjct: 49 YIDKEDFLDRLEKGAFG-------------KIEAIFHQGACSDTTETDGEYMMENNYQYS 95
Query: 110 -GILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKL 166
+L C + G +Y SSA+T F + R L+++G S L
Sbjct: 96 KRLLDWCAEKG--IPFIYASSAATYGDGE-------AGFREGRELERPLNVYGYSKFL 144
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
+TGGTG G I RLL++ + + S E K+ + + L+ F D+ +
Sbjct: 9 ITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ---WEMQQKFPAPCLRFFIGDVRDK 65
Query: 70 ESFDAAIAGCTGVIHVAAPIDIHGKE--PEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
E A+ G V+H AA + E P E I+ ++G ++ + + +G VKRVV
Sbjct: 66 ERLTRALRGVDYVVHAAALKQVPAAEYNPFEC-IRTNINGAQNVIDAAIDNG-VKRVVAL 123
Query: 128 SSASTVH 134
S+ +
Sbjct: 124 STDKAAN 130
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.003
Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 50/204 (24%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ VTG G +GS ++ L GY S DL
Sbjct: 1 KILVTGHRGLVGSAIVRVLARRGYENVVFRTSK-----------------------ELDL 37
Query: 67 NNPESFDAAIA--GCTGVIHVAAPID-IHG--KEPEEVIIQRAVSGTIGILKSCLKSGTV 121
+ E+ A VIH+AA + I P + + + ++ + + G
Sbjct: 38 TDQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLIND-NVIHAAHRFGVK 96
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW-------GKSYKLSKTLAERA 174
K V SS + +DE+ D+ + Y ++K +
Sbjct: 97 KLVFLGSSCI---YPDLAPQPIDES-----------DLLTGPPEPTNEGYAIAKRAGLKL 142
Query: 175 ALEFAEEHGLDLVTIIPSFVTGPF 198
+ +++G D ++++P+ + GP
Sbjct: 143 CEAYRKQYGCDYISVMPTNLYGPH 166
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.003
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
VTG +G + +RL G V RSD E +L + R Q AD+
Sbjct: 8 VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEA--VEALGRRAQAVQADV 65
Query: 67 NNPESFDAAIA 77
+ + +AA+A
Sbjct: 66 TDKAALEAAVA 76
|
Length = 249 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.003
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69
VTGG G IG+ + RL GY V P ++R ++L ++ D+++
Sbjct: 5 VTGGMGGIGTAICQRLAKDGYRVAANCG--PNEERAEAWLQEQGALGFDFRVVEGDVSS- 61
Query: 70 ESFDAAIAGCTGVIHVAAPIDI 91
F++ A V PID+
Sbjct: 62 --FESCKAAVAKVEAELGPIDV 81
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.004
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+C+ G GFIGS L +L+ + ++ + L +P S R+Q ++
Sbjct: 16 TICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINI 74
Query: 67 NNPESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+ + I I++AA P D + P + I + + ++K C ++ KR
Sbjct: 75 KHDSRLEGLIKMADLTINLAAICTPAD-YNTRPLDTIYSNFIDA-LPVVKYCSENN--KR 130
Query: 124 VVYTSSASTVHFSGKDVDML---DETFWSDVD-YIRKLD----IWGK------SYKLSKT 169
+++ ST GK + D D Y+ K D I+G SY +K
Sbjct: 131 LIHF---STCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQ 187
Query: 170 LAERAALEFAE--EHGLDLVTIIPSFVTGP 197
L ER L +AE E+GL+ + P GP
Sbjct: 188 LIER--LIYAEGAENGLEFTIVRPFNWIGP 215
|
Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 243 | |||
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.98 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.98 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.98 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.98 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.98 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.98 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.97 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.97 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.97 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.97 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.96 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.96 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.95 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.95 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.94 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.94 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.94 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.94 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.94 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.94 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.93 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.93 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.93 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.93 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.93 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.93 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.93 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.93 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.93 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.93 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.93 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.92 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.92 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.92 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.92 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.92 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.92 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.92 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.92 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.92 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.92 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.91 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.91 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.91 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.91 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.91 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.91 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.91 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.91 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.91 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.91 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.91 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.91 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.91 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.91 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.91 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.91 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.91 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.9 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.9 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.9 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.9 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.9 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.9 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.9 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.9 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.9 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.9 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.9 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.9 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.9 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.9 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.9 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.89 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.89 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.89 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.89 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.89 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.89 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.89 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.89 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.89 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.89 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.88 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.88 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.88 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.88 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.88 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.88 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.88 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.88 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.87 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.87 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.87 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.87 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.87 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.87 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.87 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.87 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.87 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.87 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.87 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.87 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.86 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.86 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.86 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.86 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.86 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.86 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.86 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.86 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.85 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.85 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.85 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.85 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.85 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.84 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.84 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.84 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.84 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.84 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.83 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.82 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.82 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.81 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.81 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.81 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.81 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.81 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.81 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.81 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.8 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.8 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.79 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.79 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.79 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.78 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.78 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.78 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.78 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.75 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.74 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.72 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.71 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.71 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.7 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.69 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.69 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.69 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.69 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.68 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.68 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.67 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.67 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.64 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.64 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.61 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.61 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.56 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.54 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.48 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.41 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.38 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.36 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.33 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.32 | |
| PLN00106 | 323 | malate dehydrogenase | 99.3 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.19 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.13 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 99.11 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.09 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.08 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.98 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.86 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.84 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.8 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.78 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.75 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.74 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.63 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.62 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.6 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.57 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.52 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.47 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 98.43 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.39 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.38 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.34 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 98.33 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 98.26 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.2 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.19 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 98.19 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 98.19 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.16 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 98.15 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.12 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.11 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 98.1 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 98.09 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.08 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 98.06 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.05 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 98.04 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.98 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.98 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.95 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.95 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.95 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.95 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.94 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.91 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.88 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 97.87 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.86 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.85 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.83 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.82 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.81 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.79 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.79 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.79 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.76 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.75 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.74 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.74 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.73 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.71 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.69 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.68 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.65 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.61 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.58 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.57 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.56 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.53 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.47 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 97.43 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 97.42 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.41 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.38 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.38 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.38 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.37 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.36 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.36 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.35 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.35 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.35 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.33 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.31 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.3 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.29 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.28 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.26 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.24 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 97.23 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.23 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 97.23 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.22 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.21 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.21 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.2 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.19 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.19 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.18 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.15 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.15 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.14 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.14 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.12 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.12 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.12 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.12 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.12 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.11 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.09 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.08 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.06 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.06 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.05 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.02 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 97.02 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.01 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.01 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.0 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.99 | |
| KOG1496 | 332 | consensus Malate dehydrogenase [Energy production | 96.99 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.98 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.97 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.97 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.96 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.95 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.94 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.93 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.91 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.9 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.9 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.89 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.89 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.88 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.85 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.84 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.84 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.83 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 96.83 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.82 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.81 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 96.81 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.81 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.8 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.79 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.79 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.79 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.79 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.77 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.76 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.76 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.75 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.75 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.74 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.72 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.72 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.72 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.72 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.72 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.71 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.71 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.69 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.69 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.68 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.66 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.65 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.65 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.65 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.61 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.6 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 96.6 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.6 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.59 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.59 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.57 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.55 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.54 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.53 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.53 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.51 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.51 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.51 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.49 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.49 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.49 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.48 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.47 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.45 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.44 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.44 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.42 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.42 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.41 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.41 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.39 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.39 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 96.38 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.38 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.37 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.37 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.37 |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=267.93 Aligned_cols=234 Identities=48% Similarity=0.789 Sum_probs=201.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++++|+||||+||||+|+++.|+++||+|.+.+| +++.......+..++....+++.+.+|+.|++++.+++++||.|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR-~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVR-DPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEc-CcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 5689999999999999999999999999999999 666555655666666667789999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecC---CCCcccccCCCCCchhhhhhcCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFS---GKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|+|.+......++..+.++..+.|+.|++++|++..+++|+||+||.+++... ......++|..|++.++.....
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~-- 161 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK-- 161 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH--
Confidence 99999877555556689999999999999999999999999999998888755 2245678999999988866544
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
+-|..+|..+|+...+++++.|++.+.+.|+.|+||...+..+.....+++.+.|....+. +....++|++|+|.|.+
T Consensus 162 -~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~-n~~~~~VdVrDVA~AHv 239 (327)
T KOG1502|consen 162 -LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP-NFWLAFVDVRDVALAHV 239 (327)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-CCceeeEeHHHHHHHHH
Confidence 4599999999999999999999999999999999998888766767777788777655444 33445999999999988
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
++
T Consensus 240 ~a 241 (327)
T KOG1502|consen 240 LA 241 (327)
T ss_pred HH
Confidence 76
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=265.84 Aligned_cols=241 Identities=48% Similarity=0.863 Sum_probs=175.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|-+..|+|||||||||||++++++|+++|++|++++| +.........+...+....+++++.+|++|.+.+.++++++|
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEc-CcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 5566789999999999999999999999999999999 433222222221111112368899999999999999999999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|||+|+.......++....+++|+.++.+++++|++.+.+++|||+||.++++........++|..+.+.+.......+
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT 159 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence 99999987544333454578999999999999999987646899999998777654322223567655433222222334
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
.++|+.+|.++|.+++.+++++|++++++||+++|||+........+........+....+...+.++|+|++|+|++++
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~ 239 (351)
T PLN02650 160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI 239 (351)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHH
Confidence 56899999999999999998999999999999999997654332222221122223322222234579999999999988
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
++
T Consensus 240 ~~ 241 (351)
T PLN02650 240 FL 241 (351)
T ss_pred HH
Confidence 75
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=249.67 Aligned_cols=216 Identities=24% Similarity=0.309 Sum_probs=176.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
++||||||+||||||.|..|++.|++|++++.-+....+.+.+. ..+++++|+.|.+.+.++++ ++|+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence 47999999999999999999999999999987444333332211 16899999999999999997 589999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+||.... +-.+| ..+++.|+.+|.+|+++|++++ +++|||-||+++|+.. ...|++|+.+.. |.
T Consensus 73 HFAa~~~VgESv~~P-l~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p--~~~PI~E~~~~~---------p~ 139 (329)
T COG1087 73 HFAASISVGESVQNP-LKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEP--TTSPISETSPLA---------PI 139 (329)
T ss_pred ECccccccchhhhCH-HHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCC--CCcccCCCCCCC---------CC
Confidence 99997655 33455 4999999999999999999999 9999999999987554 447899998754 67
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC-------CCCcHHHHHHHHhcCccccc----------cc
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMVMGNREEYS----------ML 224 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~ 224 (243)
|+||.||.+.|++++++++.++++++++|.+++-|...... ....++...+...|+...+. +.
T Consensus 140 NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT 219 (329)
T COG1087 140 NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGT 219 (329)
T ss_pred CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCC
Confidence 88999999999999999999999999999999999754432 24556777777766664332 13
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..||+|||.|+|++.+.+
T Consensus 220 ~iRDYIHV~DLA~aH~~A 237 (329)
T COG1087 220 CIRDYIHVDDLADAHVLA 237 (329)
T ss_pred eeeeeeehhHHHHHHHHH
Confidence 379999999999998765
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=256.09 Aligned_cols=237 Identities=41% Similarity=0.677 Sum_probs=173.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+||||||+||||++++++|+++|++|++++|+... ......+...+ ...+++++.+|++|.+.+.++++++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN-QKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC-HHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 36799999999999999999999999999999984322 11111111111 11368899999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC--CcccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK--DVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+|+.......++....+++|+.++.++++++++.+.+++||++||.++|+.... ...+++|..|..........+|.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~ 165 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT 165 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence 9999754333455546789999999999999988633889999999988764321 22346676554332222233567
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc-------ccCcCceeHHH
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM-------LLNISMVHIDD 234 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~D 234 (243)
++|+.+|.++|.+++.++++++++++++||+++|||+.....+..+..+.....+....+.+ ++.++|+|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 78999999999999999988999999999999999986544344333333333343322211 23479999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 246 ~a~a~~~~ 253 (338)
T PLN00198 246 VCRAHIFL 253 (338)
T ss_pred HHHHHHHH
Confidence 99998765
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=259.18 Aligned_cols=226 Identities=19% Similarity=0.137 Sum_probs=171.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc-C-CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN-L-PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+|+|||||||||||++|+++|+++|++|++++|...........+.. . .....+++++.+|++|.+.+.++++++|+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~ 93 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY 93 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence 468999999999999999999999999999999843322111111110 0 00123688999999999999999999999
Q ss_pred EEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 82 VIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 82 vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|||+|+.... ...++ ...+++|+.++.+++++|++.+ +++|||+||.++|+..+ ..+..|+.+. .
T Consensus 94 ViHlAa~~~~~~~~~~~-~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~--~~~~~e~~~~---------~ 160 (348)
T PRK15181 94 VLHQAALGSVPRSLKDP-IATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHP--DLPKIEERIG---------R 160 (348)
T ss_pred EEECccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCC--CCCCCCCCCC---------C
Confidence 9999997543 22344 4789999999999999999998 99999999998775432 2334454432 2
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHH-HHHhcCcccccc--ccCcCceeHHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTL-AMVMGNREEYSM--LLNISMVHIDD 234 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~v~D 234 (243)
|.++|+.+|.++|.+++.+++.++++++++||+++|||+..+. ...+++.+. ....+.+..+.+ .+.++++|++|
T Consensus 161 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D 240 (348)
T PRK15181 161 PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN 240 (348)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHH
Confidence 4567999999999999999888899999999999999976433 223455544 344455544433 56799999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 241 ~a~a~~~~ 248 (348)
T PRK15181 241 VIQANLLS 248 (348)
T ss_pred HHHHHHHH
Confidence 99998753
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=252.13 Aligned_cols=228 Identities=37% Similarity=0.633 Sum_probs=172.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+||||||+||||++++++|+++|++|++++|+ .+.... ..+........+++++.+|++|.+.+.++++++|+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~-~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN-PDDPKN-THLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-chhhhH-HHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 56899999999999999999999999999999994 322111 0111111112368899999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC--cccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD--VDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+|++.. .+....++.|+.++.+++++|++.+ +++|||+||.+.+++.+.. ...++|+.|++.+. ...|.
T Consensus 87 h~A~~~~----~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~---~~~p~ 158 (342)
T PLN02214 87 HTASPVT----DDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDF---CKNTK 158 (342)
T ss_pred EecCCCC----CCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhh---ccccc
Confidence 9999753 2345889999999999999999998 8999999997544443221 23578887644321 11245
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
+.|+.+|.++|.+++.+++++|++++++||+++|||+...........+.....+....+ +++.++|||++|+|++++.
T Consensus 159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~i~V~Dva~a~~~ 237 (342)
T PLN02214 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY-ANLTQAYVDVRDVALAHVL 237 (342)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccC-CCCCcCeeEHHHHHHHHHH
Confidence 679999999999999998888999999999999999765433333334444445544433 3667899999999999887
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 238 a 238 (342)
T PLN02214 238 V 238 (342)
T ss_pred H
Confidence 5
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=250.52 Aligned_cols=235 Identities=40% Similarity=0.629 Sum_probs=174.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|.-+.|+|||||||||||++++++|+++|++|++++|+.. .......+........+++++.+|++|.+.+.++++++|
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD 79 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence 4445689999999999999999999999999999999433 222222221111112478999999999999999999999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeee-cCCC--CcccccCCCCCchhhhhh
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVH-FSGK--DVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~-~~~~--~~~~~~e~~~~~~~~~~~ 156 (243)
+|||+|++......++....++.|+.++.+++++|++. + +++||++||.+++. +.+. ....++|+.|..+....
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~- 157 (322)
T PLN02986 80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCR- 157 (322)
T ss_pred EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhh-
Confidence 99999997544334555467899999999999999986 5 89999999987653 2211 23457788776543221
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHH
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVA 236 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 236 (243)
.+.+.|+.+|.++|.+++.+.+++|++++++||+++|||...+........+.....+.. .+ +.+.+++||++|+|
T Consensus 158 --~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~v~v~Dva 233 (322)
T PLN02986 158 --ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN-LF-NNRFYRFVDVRDVA 233 (322)
T ss_pred --ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC-CC-CCcCcceeEHHHHH
Confidence 234679999999999999999888999999999999999755432222333333333433 22 35567999999999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
++++.+
T Consensus 234 ~a~~~a 239 (322)
T PLN02986 234 LAHIKA 239 (322)
T ss_pred HHHHHH
Confidence 998765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=235.31 Aligned_cols=223 Identities=22% Similarity=0.226 Sum_probs=180.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
|++|||||+||||++++++++++.. +|+.++. ..-......+.... ..++..++++|++|.+.+.++++ ++|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk--LTYAgn~~~l~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK--LTYAGNLENLADVE-DSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec--ccccCCHHHHHhhh-cCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 4799999999999999999999864 3555554 33333444433321 23589999999999999999998 5899
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|+|+||..+. .+-.....++++|+.||.+|++++++....-||+|+||..||+.-+.+....+|.++.. |
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~---------P 148 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN---------P 148 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC---------C
Confidence 9999998775 44455569999999999999999999982249999999999877766556778888754 6
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHH-HHHHHhcCcccccc--ccCcCceeHHHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRG-TLAMVMGNREEYSM--LLNISMVHIDDVAR 237 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~i~v~Dva~ 237 (243)
.+||+.||+.++.+++.|...+|++++|.|+++-|||.+.+. ++++. +...+.|.+.++-+ .+.|+|+||+|-++
T Consensus 149 sSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ 226 (340)
T COG1088 149 SSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCR 226 (340)
T ss_pred CCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHH
Confidence 788999999999999999999999999999999999976544 55654 44667788877665 66899999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
|+..+
T Consensus 227 ai~~V 231 (340)
T COG1088 227 AIDLV 231 (340)
T ss_pred HHHHH
Confidence 97643
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=246.81 Aligned_cols=231 Identities=41% Similarity=0.637 Sum_probs=168.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.|+|||||||||||++++++|+++|++|++++|+.. .......+........+++++.+|+.|++.+.++++++|+|||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN-DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC-chhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 579999999999999999999999999999999432 2111111111111124789999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceee-e-cCCC-CcccccCCCCCchhhhhhcCCC
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTV-H-FSGK-DVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~-~-~~~~-~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|++......++....+++|+.++.++++++++. + +++|||+||.+++ + +.+. ...+++|+.+..+.... ..
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~---~~ 158 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCE---ES 158 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhh---cc
Confidence 9997654333444478999999999999999987 6 8999999998643 2 2211 22346776654332111 12
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
.+.|+.+|.++|++++.++++++++++++||+++|||............+.+...+.. .+ .++.++|+|++|+|++++
T Consensus 159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~v~Dva~a~~ 236 (322)
T PLN02662 159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TF-PNASYRWVDVRDVANAHI 236 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cC-CCCCcCeEEHHHHHHHHH
Confidence 2469999999999999998888999999999999999755432222233333433322 22 356789999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 237 ~~ 238 (322)
T PLN02662 237 QA 238 (322)
T ss_pred HH
Confidence 65
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=244.82 Aligned_cols=236 Identities=39% Similarity=0.639 Sum_probs=174.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|..++|+||||||+||||++++++|+++|++|++++|+.. .......+........+++++.+|++|.+.+.++++++|
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 79 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK-DRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE 79 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc-chhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence 5556789999999999999999999999999999988433 221111111111112468999999999999999999999
Q ss_pred EEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC---CcccccCCCCCchhhhhh
Q 026091 81 GVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK---DVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 81 ~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~---~~~~~~e~~~~~~~~~~~ 156 (243)
+|||+|+.... ...+++...++.|+.++.+++++|.+...+++||++||.+++++... ...+++|+.+..+...
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~-- 157 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA-- 157 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHh--
Confidence 99999997543 22345568899999999999999988632789999999887765321 2345788876654321
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHH
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVA 236 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 236 (243)
..+.+.|+.+|.++|.+++.+++++|++++++||+++|||+..+........+.....++.. + ..+.++|+|++|+|
T Consensus 158 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~-~~~~r~~i~v~Dva 234 (325)
T PLN02989 158 -EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-F-NTTHHRFVDVRDVA 234 (325)
T ss_pred -cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-C-CCcCcCeeEHHHHH
Confidence 11345699999999999999988889999999999999998654322222333344444332 2 24557999999999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
++++.+
T Consensus 235 ~a~~~~ 240 (325)
T PLN02989 235 LAHVKA 240 (325)
T ss_pred HHHHHH
Confidence 998765
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=241.36 Aligned_cols=217 Identities=34% Similarity=0.398 Sum_probs=160.9
Q ss_pred EEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEee
Q 026091 9 CVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 9 lvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 86 (243)
|||||+||+|++|+++|+++| ++|.+++|+..... ...+.. .+..+++++|++|.+++.++++++|+|||+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence 699999999999999999999 79999988433211 111111 1233499999999999999999999999999
Q ss_pred eccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCccc--ccCCCCCchhhhhhcCCCCchH
Q 026091 87 APIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDM--LDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 87 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~y 164 (243)
++.......+....++.|+.||.|++++|++.+ ++++||+||.+++......... .+|..+.+. .+.+.|
T Consensus 75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~-------~~~~~Y 146 (280)
T PF01073_consen 75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS-------SPLDPY 146 (280)
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccc-------cccCch
Confidence 987664445666899999999999999999999 9999999999988763222222 245543221 245679
Q ss_pred HhhHHHHHHHHHHHHH---H--cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc-cccc-cccCcCceeHHHHHH
Q 026091 165 KLSKTLAERAALEFAE---E--HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR-EEYS-MLLNISMVHIDDVAR 237 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~---~--~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~Dva~ 237 (243)
+.||..+|+++.+... + ..+.+++|||+.||||+.....+....... .+.. ..+. +....+++|++|+|.
T Consensus 147 ~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~---~g~~~~~~g~~~~~~~~vyV~NvA~ 223 (280)
T PF01073_consen 147 AESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR---SGLFLFQIGDGNNLFDFVYVENVAH 223 (280)
T ss_pred HHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHH---hcccceeecCCCceECcEeHHHHHH
Confidence 9999999999998654 1 249999999999999986555433333221 1211 1122 245679999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
|.+.+
T Consensus 224 ahvlA 228 (280)
T PF01073_consen 224 AHVLA 228 (280)
T ss_pred HHHHH
Confidence 98764
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=243.75 Aligned_cols=235 Identities=43% Similarity=0.757 Sum_probs=168.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++||||||+||||++++++|+++|++|++++| +....... +.... ...+++++.+|++|.+.+.++++++|+||
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR-DPAKSLHL--LSKWK-EGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHH--HHhhc-cCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 3579999999999999999999999999999998 44322111 11111 13468999999999999999999999999
Q ss_pred EeeeccCCC---CCChHHH-----HHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC---cccccCCCCCchh
Q 026091 84 HVAAPIDIH---GKEPEEV-----IIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD---VDMLDETFWSDVD 152 (243)
Q Consensus 84 ~~a~~~~~~---~~~~~~~-----~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~---~~~~~e~~~~~~~ 152 (243)
|+|+..... ...+... .++.|+.++.+++++|++.+.+++||++||.++|+..+.. ..+++|+.+...+
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID 164 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence 999975432 1112223 3455679999999999887437899999999887643221 1346676433222
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc---c----cc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS---M----LL 225 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~ 225 (243)
......++.++|+.+|.++|++++.+++.++++++++||+++|||+.....+..+..+.....+....+. + .+
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 244 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMG 244 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccC
Confidence 1111223456799999999999999998899999999999999998765555545544443334332221 1 12
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.++|||++|+|++++.+
T Consensus 245 ~~dfi~v~Dva~a~~~~ 261 (353)
T PLN02896 245 SIALVHIEDICDAHIFL 261 (353)
T ss_pred ceeEEeHHHHHHHHHHH
Confidence 46999999999998765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=241.57 Aligned_cols=223 Identities=22% Similarity=0.272 Sum_probs=165.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC-ChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN-NPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~v 82 (243)
||+|||||||||||++|+++|++. |++|++++| +.... ..+. ...+++++.+|+. +.+.+.++++++|+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r-~~~~~---~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~d~V 72 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDM-QTDRL---GDLV----NHPRMHFFEGDITINKEWIEYHVKKCDVI 72 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC-cHHHH---HHhc----cCCCeEEEeCCCCCCHHHHHHHHcCCCEE
Confidence 358999999999999999999986 699999998 43211 1111 1236899999997 678888899999999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
||+|+.... ...++ ...+++|+.++.+++++|++.+ +++||+||.++|+... ..+++|+.++.. ..+...|
T Consensus 73 iH~aa~~~~~~~~~~p-~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~--~~~~~ee~~~~~--~~~~~~p 145 (347)
T PRK11908 73 LPLVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCP--DEEFDPEASPLV--YGPINKP 145 (347)
T ss_pred EECcccCChHHhhcCc-HHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCC--CcCcCccccccc--cCcCCCc
Confidence 999987543 23344 4788999999999999999887 6999999998775432 234555432210 0111235
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC------CCCcHHHHH-HHHhcCccccc--cccCcCcee
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ------LAGSVRGTL-AMVMGNREEYS--MLLNISMVH 231 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~------~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~ 231 (243)
.++|+.+|.++|++++.++.+++++++++||+++|||+..+. ...++..+. ....+.+..+. +++.++|+|
T Consensus 146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~ 225 (347)
T PRK11908 146 RWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD 225 (347)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence 678999999999999999988999999999999999975432 122343333 34445544443 366899999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 226 v~D~a~a~~~~ 236 (347)
T PRK11908 226 IDDGIDALMKI 236 (347)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=243.70 Aligned_cols=232 Identities=19% Similarity=0.182 Sum_probs=164.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++|+|||||||||||++++++|+++ |++|++++|+ ......+.... .+.+..+++++.+|++|.+.+.++++++|+|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~-~~~~~~l~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY-NDKIKHLLEPD-TVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC-chhhhhhhccc-cccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 4578999999999999999999998 5999999984 32221111110 0012347999999999999999999999999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhh-------
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY------- 153 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~------- 153 (243)
||+|+.... ...++ .+.+..|+.++.+++++|++.+ ++|||+||.++|+... ..+++|+.+..++.
T Consensus 91 iHlAa~~~~~~~~~~~-~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~--~~~~~e~~p~~~~~~~~~~~e 165 (386)
T PLN02427 91 INLAAICTPADYNTRP-LDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTI--GSFLPKDHPLRQDPAFYVLKE 165 (386)
T ss_pred EEcccccChhhhhhCh-HHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCc--CCCCCcccccccccccccccc
Confidence 999997543 22233 3667889999999999998877 7999999998775432 12333333221100
Q ss_pred ------hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCC---------CCCCcHHHHHH-HHhcC
Q 026091 154 ------IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICP---------QLAGSVRGTLA-MVMGN 217 (243)
Q Consensus 154 ------~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~---------~~~~~~~~~~~-~~~~~ 217 (243)
..+...|.+.|+.+|.++|++++.+++.++++++++||+++|||+... ..+.++..+.. ...+.
T Consensus 166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (386)
T PLN02427 166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE 245 (386)
T ss_pred cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCC
Confidence 011122456799999999999999888889999999999999997531 11223333333 33444
Q ss_pred cccccc--ccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSM--LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~--~~~~~~i~v~Dva~a~~~~ 242 (243)
+..+.+ .+.++|+|++|+|++++.+
T Consensus 246 ~~~~~g~g~~~r~~i~V~Dva~ai~~a 272 (386)
T PLN02427 246 PLKLVDGGQSQRTFVYIKDAIEAVLLM 272 (386)
T ss_pred CeEEECCCCceECcEeHHHHHHHHHHH
Confidence 433332 5678999999999998765
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=246.99 Aligned_cols=235 Identities=14% Similarity=0.129 Sum_probs=163.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc------h-------hhhhhcC-CCCCCCeEEEecCCCCh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR------D-------LSFLTNL-PRASERLQIFNADLNNP 69 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~-------~~~~~~~-~~~~~~~~~~~~D~~d~ 69 (243)
++|+|||||||||||++|+++|+++|++|++++|....... . ...+... .....+++++.+|++|.
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~ 125 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF 125 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH
Confidence 57899999999999999999999999999998752111000 0 0001000 00123689999999999
Q ss_pred hhHHHHhc--cccEEEEeeeccCCC--CC--ChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEEecceeeecCCCCccc
Q 026091 70 ESFDAAIA--GCTGVIHVAAPIDIH--GK--EPEEVIIQRAVSGTIGILKSCLKSGTVK-RVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 70 ~~~~~~~~--~~d~vi~~a~~~~~~--~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~ 142 (243)
+.+.++++ ++|+|||+|+..... .. ++....+++|+.++.+++++|++.+ ++ +||++||.++|+... .+
T Consensus 126 ~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~---~~ 201 (442)
T PLN02572 126 EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPN---ID 201 (442)
T ss_pred HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCC---CC
Confidence 99999998 489999999764331 11 2234567899999999999999998 75 899999998875321 22
Q ss_pred ccCCCCCch-----hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--------------
Q 026091 143 LDETFWSDV-----DYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-------------- 203 (243)
Q Consensus 143 ~~e~~~~~~-----~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-------------- 203 (243)
++|...... +..+....|.++|+.+|.++|.+++.+++.+|++++++||+++|||+.....
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~ 281 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGV 281 (442)
T ss_pred CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccc
Confidence 333311100 0000112356789999999999999999889999999999999999754320
Q ss_pred -CCcHHH-HHHHHhcCccccc--cccCcCceeHHHHHHhhhcc
Q 026091 204 -AGSVRG-TLAMVMGNREEYS--MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 204 -~~~~~~-~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+.. +.....+++..+. +++.|+|+||+|+|++++.+
T Consensus 282 ~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~a 324 (442)
T PLN02572 282 FGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIA 324 (442)
T ss_pred hhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHH
Confidence 112222 2334445544443 36789999999999998765
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=240.57 Aligned_cols=224 Identities=20% Similarity=0.197 Sum_probs=165.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~v 82 (243)
||+|||||||||||++++++|+++|++|+++.++.... .....+.... ...+++++.+|++|.+++.+++++ +|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 46899999999999999999999998866555523211 1111111110 123688999999999999999984 8999
Q ss_pred EEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 83 IHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKS---------GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 83 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
||+||..... ..+.+...+++|+.++.+++++|++. + +++||++||.++|+.......+++|+.+.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~--- 154 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPY--- 154 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCC---
Confidence 9999975442 22334689999999999999999873 3 67999999998775432233456776542
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHH-HHHHhcCccccc--cccCcCc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGT-LAMVMGNREEYS--MLLNISM 229 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 229 (243)
.|.+.|+.+|.++|.+++.++++++++++++||+++|||+... ..++..+ .+...+.+..+. +++.++|
T Consensus 155 ------~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 226 (355)
T PRK10217 155 ------APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRDW 226 (355)
T ss_pred ------CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCeeeCc
Confidence 2457799999999999999988899999999999999997532 2233433 334444444333 3668999
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|++++.+
T Consensus 227 i~v~D~a~a~~~~ 239 (355)
T PRK10217 227 LYVEDHARALYCV 239 (355)
T ss_pred CcHHHHHHHHHHH
Confidence 9999999998765
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=237.00 Aligned_cols=224 Identities=21% Similarity=0.192 Sum_probs=166.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
++|+||||||+||||+++++.|+++|++|++++|+..........+. ...+++++.+|++|.+.+.+++++ +|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN----LAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh----hcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 46899999999999999999999999999999985432211111111 123678899999999999999985 699
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+++...+++|+.++.++++++++.+.+++||++||.++|... ....+++|..+. .|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~-~~~~~~~e~~~~---------~p 148 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND-EWVWGYRETDPL---------GG 148 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC-CCCCCCccCCCC---------CC
Confidence 9999986433 222334588999999999999999877546799999998876432 122345555432 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHc-------CccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccc-cccCcCcee
Q 026091 161 GKSYKLSKTLAERAALEFAEEH-------GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYS-MLLNISMVH 231 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~-------gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~ 231 (243)
.++|+.+|.++|.+++.+++++ +++++++||+++|||+.... ..++..+.... .+....+. +.+.++|+|
T Consensus 149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~ 227 (349)
T TIGR02622 149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRAFSSNKIVIIRNPDATRPWQH 227 (349)
T ss_pred CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence 5679999999999999987664 89999999999999964221 23344444443 44444443 477899999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 228 v~D~a~a~~~~ 238 (349)
T TIGR02622 228 VLEPLSGYLLL 238 (349)
T ss_pred HHHHHHHHHHH
Confidence 99999998754
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=228.95 Aligned_cols=226 Identities=27% Similarity=0.466 Sum_probs=165.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+|+|+|||||||||++++++|+++|++|++++|+.. .......+........+++++.+|++|.+++.+++.++|.|+
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNG-ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCch-hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 4678999999999999999999999999999999422 111111112221123468999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCC---CCcccccCCCCCchhhhhhcCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSG---KDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|.++....... .+.+.+++|+.++.++++++.+...+++||++||.+++...+ ....+++|+.|.++.+... +
T Consensus 84 ~~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~---~ 159 (297)
T PLN02583 84 CCFDPPSDYPS-YDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRK---F 159 (297)
T ss_pred EeCccCCcccc-cHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhh---c
Confidence 98765443222 345889999999999999998873388999999987654221 1234678887765544322 2
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
...|+.||..+|+++..+++++|++++++||+.+|||....... .+.+.. .....+.+++||++|+|++++
T Consensus 160 ~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~--------~~~~~~-~~~~~~~~~~v~V~Dva~a~~ 230 (297)
T PLN02583 160 KLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP--------YLKGAA-QMYENGVLVTVDVNFLVDAHI 230 (297)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh--------hhcCCc-ccCcccCcceEEHHHHHHHHH
Confidence 23599999999999999988889999999999999997543211 111111 111244568999999999988
Q ss_pred ccC
Q 026091 241 FFT 243 (243)
Q Consensus 241 ~~~ 243 (243)
.++
T Consensus 231 ~al 233 (297)
T PLN02583 231 RAF 233 (297)
T ss_pred HHh
Confidence 753
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=226.66 Aligned_cols=214 Identities=28% Similarity=0.324 Sum_probs=169.8
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc--cEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC--TGVIHV 85 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~ 85 (243)
|||||||||||++++++|+++|++|+.++|++........ ..+++++.+|+.|.+.+.+++++. |+|||+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~ 72 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK--------KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHL 72 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH--------HTTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc--------cceEEEEEeeccccccccccccccCceEEEEe
Confidence 7999999999999999999999999999995543221111 017899999999999999999865 999999
Q ss_pred eeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 86 AAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 86 a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+.... .. ......++.|+.++.++++++++.+ ++++|++||..+|... ...+++|+.+.. |.++
T Consensus 73 a~~~~~~~~~-~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~--~~~~~~e~~~~~---------~~~~ 139 (236)
T PF01370_consen 73 AAFSSNPESF-EDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDP--DGEPIDEDSPIN---------PLSP 139 (236)
T ss_dssp BSSSSHHHHH-HSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSS--SSSSBETTSGCC---------HSSH
T ss_pred eccccccccc-ccccccccccccccccccccccccc-cccccccccccccccc--cccccccccccc---------cccc
Confidence 987531 12 2345889999999999999999999 8999999998876554 445667776542 4567
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC-CCCCCCCcHHHHHH-HHhcCccccc--cccCcCceeHHHHHHhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF-ICPQLAGSVRGTLA-MVMGNREEYS--MLLNISMVHIDDVARAH 239 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~-~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~Dva~a~ 239 (243)
|+.+|...|++++.+.++++++++++||+.+|||. .......++..+.. ...+++..+. +++.++++|++|+|+++
T Consensus 140 Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 219 (236)
T PF01370_consen 140 YGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAI 219 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHH
Confidence 99999999999999998899999999999999998 22223344554444 4455555443 37789999999999999
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+.+
T Consensus 220 ~~~ 222 (236)
T PF01370_consen 220 VAA 222 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=252.71 Aligned_cols=224 Identities=20% Similarity=0.291 Sum_probs=166.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh-HHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES-FDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~ 81 (243)
++|+|||||||||||++|+++|+++ |++|++++|... .... +. ...+++++.+|++|.+. +.++++++|+
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~-~~~~---~~----~~~~~~~~~gDl~d~~~~l~~~l~~~D~ 385 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD-AISR---FL----GHPRFHFVEGDISIHSEWIEYHIKKCDV 385 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch-hhhh---hc----CCCceEEEeccccCcHHHHHHHhcCCCE
Confidence 4689999999999999999999986 799999999432 2111 10 12368999999998765 5778899999
Q ss_pred EEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 82 VIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 82 vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|||+||.... ...++ ...+++|+.++.+++++|++.+ ++|||+||.++|+.. ...+++|+.+..+ ..+...
T Consensus 386 ViHlAa~~~~~~~~~~~-~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~--~~~~~~E~~~~~~--~~p~~~ 458 (660)
T PRK08125 386 VLPLVAIATPIEYTRNP-LRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMC--TDKYFDEDTSNLI--VGPINK 458 (660)
T ss_pred EEECccccCchhhccCH-HHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCC--CCCCcCccccccc--cCCCCC
Confidence 9999997554 22333 4788999999999999999987 799999999877543 2345677765321 112223
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC------CCcHHH-HHHHHhcCccccc--cccCcCce
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL------AGSVRG-TLAMVMGNREEYS--MLLNISMV 230 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~------~~~~~~-~~~~~~~~~~~~~--~~~~~~~i 230 (243)
|.+.|+.+|.++|.+++.+++.+|++++++||+++|||+..... ...+.. +.....+.+..+. +.+.++|+
T Consensus 459 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i 538 (660)
T PRK08125 459 QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFT 538 (660)
T ss_pred CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeecee
Confidence 55689999999999999998888999999999999999754311 122333 3334444444333 36689999
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
|++|+|++++.+
T Consensus 539 ~v~Dva~a~~~~ 550 (660)
T PRK08125 539 DIRDGIEALFRI 550 (660)
T ss_pred eHHHHHHHHHHH
Confidence 999999998764
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=234.76 Aligned_cols=222 Identities=21% Similarity=0.161 Sum_probs=162.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|||||||||||++++++|.++||+|++++|...... ... ...++++.+|++|.+.+.++++++|+||
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi 90 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED---MFCHEFHLVDLRVMENCLKVTKGVDHVF 90 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc---cccceEEECCCCCHHHHHHHHhCCCEEE
Confidence 4689999999999999999999999999999999432111 000 1135788999999999999999999999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC--cccccCCCCCchhhhhhcCC
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD--VDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~ 159 (243)
|+|+.... .........++.|+.++.+++++|++.+ +++|||+||.++|+..... ..++.|+... +..
T Consensus 91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~-------p~~ 162 (370)
T PLN02695 91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAW-------PAE 162 (370)
T ss_pred EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCC-------CCC
Confidence 99986532 1111223567889999999999999998 9999999999877543211 1123443210 113
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHH-HHh-cCccccc--cccCcCceeHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLA-MVM-GNREEYS--MLLNISMVHID 233 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~-~~~-~~~~~~~--~~~~~~~i~v~ 233 (243)
|.+.|+.+|.++|.+++.+++++|++++++||+++|||+..... ......+.. ... +.+..+. +++.++|+|++
T Consensus 163 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~ 242 (370)
T PLN02695 163 PQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFID 242 (370)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHH
Confidence 56789999999999999998888999999999999999653221 122333333 222 2333332 36689999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|++++++++
T Consensus 243 D~a~ai~~~ 251 (370)
T PLN02695 243 ECVEGVLRL 251 (370)
T ss_pred HHHHHHHHH
Confidence 999998764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=231.02 Aligned_cols=225 Identities=20% Similarity=0.188 Sum_probs=164.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhh-cC-CCCCCCeEEEecCCCChhhHHHHhcc--cc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLT-NL-PRASERLQIFNADLNNPESFDAAIAG--CT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~D~~d~~~~~~~~~~--~d 80 (243)
|+|||||||||||++++++|+++|++|++++|+.... ......+. .. .....+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999943311 11111111 00 00123689999999999999999985 69
Q ss_pred EEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 81 GVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTV---KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 81 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
+|||+|+..... ..+.....+++|+.++.+++++|++.+ + ++|||+||.++|+.. ...+++|+.+..
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~--~~~~~~E~~~~~------ 151 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKV--QEIPQNETTPFY------ 151 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCC--CCCCCCCCCCCC------
Confidence 999999975542 112234777889999999999999987 5 389999999877543 223466765432
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC-CCCcHHHHH-HHHhcCcc-cc-c-cccCcCcee
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ-LAGSVRGTL-AMVMGNRE-EY-S-MLLNISMVH 231 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~-~~~~~~~~~-~~~~~~~~-~~-~-~~~~~~~i~ 231 (243)
|.++|+.||.++|.+++.+++++|++++..|+.++|||+.... ....+..+. ....+... .+ . +++.++|+|
T Consensus 152 ---p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~ 228 (343)
T TIGR01472 152 ---PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGH 228 (343)
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCcee
Confidence 5678999999999999999988899999999999999964332 222233333 33334432 22 2 367899999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 229 V~D~a~a~~~~ 239 (343)
T TIGR01472 229 AKDYVEAMWLM 239 (343)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=236.39 Aligned_cols=221 Identities=23% Similarity=0.301 Sum_probs=161.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.+||||||||||||++|+++|+++|++|++++|...........+. ...+++++.+|+.+.. +.++|+|||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~----~~~~~~~~~~Di~~~~-----~~~~D~ViH 190 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF----GNPRFELIRHDVVEPI-----LLEVDQIYH 190 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc----cCCceEEEECcccccc-----ccCCCEEEE
Confidence 4689999999999999999999999999999984321111111110 1236788899987653 457999999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.... ....+..+.+++|+.++.+++++|++.+ + ++||+||.++|+.. ...+.+|+.+.+.+.. .|.+.
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~--~~~p~~E~~~~~~~p~----~p~s~ 262 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP--LEHPQKETYWGNVNPI----GERSC 262 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCC--CCCCCCccccccCCCC----CCCCc
Confidence 9987543 2222335889999999999999999998 5 89999999887543 2235667654321111 23567
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCcccccc--ccCcCceeHHHHHHhhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYSM--LLNISMVHIDDVARAHI 240 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~ 240 (243)
|+.+|.++|++++.+++.++++++++||+++|||+........+..+. ....+.+..+.+ .+.++|+|++|+++++.
T Consensus 263 Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~ 342 (436)
T PLN02166 263 YDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLV 342 (436)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHH
Confidence 999999999999999888899999999999999975433233344333 444455544433 45799999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 343 ~~ 344 (436)
T PLN02166 343 AL 344 (436)
T ss_pred HH
Confidence 65
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=228.42 Aligned_cols=230 Identities=22% Similarity=0.275 Sum_probs=166.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|++++|+|+|||||||+|++++++|+++|++|++++|...........+.... ....+++++.+|++|++.+.++++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 66677899999999999999999999999999999874322211111111111 112468899999999999999986
Q ss_pred cccEEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 78 GCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
++|+|||+|+.... ...+.+...+++|+.++.+++++|++.+ +++||++||.++|+.. ...+++|+.+.+
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~~------ 151 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQP--EEVPCTEEFPLS------ 151 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCCC------
Confidence 58999999986543 2223445889999999999999999988 8999999998766432 334677776543
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCcccc------
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREEY------ 221 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~------ 221 (243)
|.+.|+.+|.++|.+++.++.. .+++++++|++++||+..... ...++..+.....+....+
T Consensus 152 ---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 228 (352)
T PLN02240 152 ---ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGND 228 (352)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCC
Confidence 4467999999999999988754 589999999999999753211 1122333333333332211
Q ss_pred ----ccccCcCceeHHHHHHhhhcc
Q 026091 222 ----SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ----~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+.++|+|++|+|++++.+
T Consensus 229 ~~~~~g~~~~~~i~v~D~a~a~~~a 253 (352)
T PLN02240 229 YPTKDGTGVRDYIHVMDLADGHIAA 253 (352)
T ss_pred CCCCCCCEEEeeEEHHHHHHHHHHH
Confidence 125678999999999987654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=234.63 Aligned_cols=222 Identities=22% Similarity=0.281 Sum_probs=161.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+.|||||||||||||++|+++|+++|++|++++|........... .. ...+++++.+|+.+. ++.++|+||
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~--~~--~~~~~~~i~~D~~~~-----~l~~~D~Vi 188 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH--HF--SNPNFELIRHDVVEP-----ILLEVDQIY 188 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh--hc--cCCceEEEECCccCh-----hhcCCCEEE
Confidence 457999999999999999999999999999998732211111110 00 123678899998765 345799999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+.... ....+....+++|+.++.+++++|++.+ + ++||+||..+|+.. ...+.+|+.+...+.. .+.+
T Consensus 189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~--~~~p~~E~~~~~~~P~----~~~s 260 (442)
T PLN02206 189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP--LQHPQVETYWGNVNPI----GVRS 260 (442)
T ss_pred EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCC--CCCCCCccccccCCCC----Cccc
Confidence 99997543 2222345889999999999999999998 5 89999999877543 2335566654321111 1346
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCcccccc--ccCcCceeHHHHHHhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYSM--LLNISMVHIDDVARAH 239 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~v~Dva~a~ 239 (243)
.|+.+|.++|.++..+.+.++++++++||+++|||+........+..+. +...+++..+.+ ++.++|+|++|+|+++
T Consensus 261 ~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai 340 (442)
T PLN02206 261 CYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL 340 (442)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHH
Confidence 7999999999999999888899999999999999975432223344333 444455544433 5578999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+.+
T Consensus 341 ~~a 343 (442)
T PLN02206 341 MRL 343 (442)
T ss_pred HHH
Confidence 765
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=228.35 Aligned_cols=230 Identities=32% Similarity=0.495 Sum_probs=164.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCC---CCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPR---ASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
++|+||||||+||||++++++|+++|++|++++| +......+..+..... ...+++++.+|++|.+.+.++++++|
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r-~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d 130 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD-TQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA 130 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence 5689999999999999999999999999999988 4433222222211000 01357899999999999999999999
Q ss_pred EEEEeeeccCCCC-CChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecce--eeecC-CCC-cccccCCCCCchhhh
Q 026091 81 GVIHVAAPIDIHG-KEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSAS--TVHFS-GKD-VDMLDETFWSDVDYI 154 (243)
Q Consensus 81 ~vi~~a~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~--~~~~~-~~~-~~~~~e~~~~~~~~~ 154 (243)
.|+|+|+...... ........+.|+.++.+++++|++. + ++++||+||.+ +|... +.. ...++|+.+.+.+.
T Consensus 131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~- 208 (367)
T PLN02686 131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF- 208 (367)
T ss_pred EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh-
Confidence 9999998764421 1112356788999999999999986 6 99999999964 33211 111 13466665443211
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHH
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDD 234 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 234 (243)
...|.+.|+.+|.++|.+++.+++++|++++++||+++|||+........ ......+. ..+.+++.++++||+|
T Consensus 209 --~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~---~~~~~~g~-~~~~g~g~~~~v~V~D 282 (367)
T PLN02686 209 --CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA---TIAYLKGA-QEMLADGLLATADVER 282 (367)
T ss_pred --cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh---HHHHhcCC-CccCCCCCcCeEEHHH
Confidence 12245679999999999999998888999999999999999754322221 12333332 3333456668999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 283 va~A~~~a 290 (367)
T PLN02686 283 LAEAHVCV 290 (367)
T ss_pred HHHHHHHH
Confidence 99998764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=222.89 Aligned_cols=215 Identities=31% Similarity=0.366 Sum_probs=165.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc-cEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC-TGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-d~vi~~ 85 (243)
+|||||||||||++|+++|+++|++|.+++|...... ... ..+.++.+|++|.+...+..+++ |+|||+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~ 71 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD-PLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIHL 71 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc-ccc---------cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence 4999999999999999999999999999999443221 110 36789999999999888888888 999999
Q ss_pred eeccCCCCCC--hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCC-CCchhhhhhcCCCCc
Q 026091 86 AAPIDIHGKE--PEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF-WSDVDYIRKLDIWGK 162 (243)
Q Consensus 86 a~~~~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~ 162 (243)
|+........ ....+++.|+.++.+++++|++.+ ++++||.||.++++.. ....+++|+. +.. |.+
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~-~~~~~~~E~~~~~~---------p~~ 140 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGD-PPPLPIDEDLGPPR---------PLN 140 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCC-CCCCCcccccCCCC---------CCC
Confidence 9986652221 234689999999999999999988 9999998887766655 3333677763 222 344
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCC-cHHH-HHHHHhcCc-ccccc--ccCcCceeHHHHHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAG-SVRG-TLAMVMGNR-EEYSM--LLNISMVHIDDVAR 237 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~-~~~~-~~~~~~~~~-~~~~~--~~~~~~i~v~Dva~ 237 (243)
+|+.+|.++|.+++.+...+|++++++||+++|||+....... .... +.....+.+ ..+.. ...++++|++|+++
T Consensus 141 ~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 220 (314)
T COG0451 141 PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVAD 220 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHH
Confidence 7999999999999999887899999999999999987765332 3333 223444444 33332 44578999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+++.+
T Consensus 221 ~~~~~ 225 (314)
T COG0451 221 ALLLA 225 (314)
T ss_pred HHHHH
Confidence 98765
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=223.60 Aligned_cols=226 Identities=17% Similarity=0.175 Sum_probs=166.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhcc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIAG--C 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~--~ 79 (243)
++|+||||||+||||++++++|+++|++|++++|+.... ...+..+.. ......+++++.+|++|.+.+.+++++ +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999843211 112222111 001124689999999999999999984 6
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCcc-----EEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVK-----RVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
|+|||+|+..... ..+.....+++|+.++.++++++++.+ ++ +||++||.++|+... .+++|+.+..
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~---~~~~E~~~~~--- 157 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTP---PPQSETTPFH--- 157 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCC---CCCCCCCCCC---
Confidence 9999999975431 122334778999999999999999988 64 899999988775432 2567766432
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC-CCCcHHHHHH-HHhcCcccc--c-cccCcC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ-LAGSVRGTLA-MVMGNREEY--S-MLLNIS 228 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~-~~~~~~~~~~-~~~~~~~~~--~-~~~~~~ 228 (243)
|.++|+.||.++|.+++.++++++++++..|+.++|||+.... ....+..+.. ...+.+..+ . +++.++
T Consensus 158 ------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd 231 (340)
T PLN02653 158 ------PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRD 231 (340)
T ss_pred ------CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceec
Confidence 4577999999999999999988999999999999999964432 2222333232 223433322 2 366899
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
|+|++|+|++++.+
T Consensus 232 ~i~v~D~a~a~~~~ 245 (340)
T PLN02653 232 WGFAGDYVEAMWLM 245 (340)
T ss_pred ceeHHHHHHHHHHH
Confidence 99999999998865
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=223.95 Aligned_cols=222 Identities=21% Similarity=0.216 Sum_probs=159.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVI 83 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 83 (243)
||||||||||||++++++|+++|++ |+++.|..... ....+... ....+++++.+|++|.+++.+++++ +|+||
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG--NLESLADV-SDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc--hHHHHHhc-ccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 7999999999999999999999976 55455422111 11111111 0123578899999999999999974 89999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhc--------CCccEEEEEecceeeecCCCC--------cccccCC
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKS--------GTVKRVVYTSSASTVHFSGKD--------VDMLDET 146 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~i~~Ss~~~~~~~~~~--------~~~~~e~ 146 (243)
|+|+.... ........++++|+.++.+++++|++. +.++++||+||.++|+..... ..+++|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 99997543 122334589999999999999999874 126799999999877543110 1124454
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHH-HHHHhcCccccc--c
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGT-LAMVMGNREEYS--M 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~--~ 223 (243)
.+. .|.+.|+.+|.++|.+++.+++.+|++++++||+.+|||+... ..++..+ .....+....+. +
T Consensus 159 ~~~---------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~~~g 227 (352)
T PRK10084 159 TAY---------APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKG 227 (352)
T ss_pred CCC---------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCeEEeCCC
Confidence 432 2557799999999999999988899999999999999997432 2233333 334444443332 3
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
++.++++|++|+|++++.+
T Consensus 228 ~~~~~~v~v~D~a~a~~~~ 246 (352)
T PRK10084 228 DQIRDWLYVEDHARALYKV 246 (352)
T ss_pred CeEEeeEEHHHHHHHHHHH
Confidence 6789999999999998754
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=239.98 Aligned_cols=225 Identities=20% Similarity=0.264 Sum_probs=164.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI--AGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~ 79 (243)
++|+|||||||||||++++++|+++ +++|++++|.... .....+... ....+++++.+|++|.+.+.+++ .++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~--~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC--SNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc--chhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 4689999999999999999999998 6889988873211 111111110 11347899999999999888776 579
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCc-ccccCCCCCchhhhhhc
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDV-DMLDETFWSDVDYIRKL 157 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-~~~~e~~~~~~~~~~~~ 157 (243)
|+|||+|+..... ...+..+++++|+.++.+++++|++.+.+++|||+||.++|+...... ...+|+.+.
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~-------- 153 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL-------- 153 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC--------
Confidence 9999999986542 112234788999999999999999987678999999998775432111 112333321
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCcccccc--ccCcCceeHHH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYSM--LLNISMVHIDD 234 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~i~v~D 234 (243)
.|.++|+.+|.++|.+++.++++++++++++||+++|||+.... ..+..+... ..+....+.+ .+.++|+|++|
T Consensus 154 -~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~D 230 (668)
T PLN02260 154 -LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCED 230 (668)
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHH
Confidence 24567999999999999999888899999999999999975422 334444333 3344444433 56789999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|+++..+
T Consensus 231 va~a~~~~ 238 (668)
T PLN02260 231 VAEAFEVV 238 (668)
T ss_pred HHHHHHHH
Confidence 99998764
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=219.65 Aligned_cols=208 Identities=21% Similarity=0.253 Sum_probs=147.2
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hh-HHHHhc-----c
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ES-FDAAIA-----G 78 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~-~~~~~~-----~ 78 (243)
|||||||||||++|+++|+++|++++++.|+..... .. ..++.+|+.|. +. +.++++ +
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~-~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch-HH------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence 899999999999999999999998888877333211 00 11233455544 33 333332 5
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|||+||.......++ ...++.|+.++.+++++|++.+ + ++||+||.++|+... ..+.+|+.+.
T Consensus 69 ~d~Vih~A~~~~~~~~~~-~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~--~~~~~E~~~~--------- 134 (308)
T PRK11150 69 IEAIFHEGACSSTTEWDG-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRT--DDFIEEREYE--------- 134 (308)
T ss_pred ccEEEECceecCCcCCCh-HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCC--CCCCccCCCC---------
Confidence 899999998654433333 3679999999999999999988 6 699999998775432 2345665443
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHH-HHHhcCccccc-c--ccCcCceeH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTL-AMVMGNREEYS-M--LLNISMVHI 232 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~-~~~~~~~~~~~-~--~~~~~~i~v 232 (243)
.|.++|+.+|.++|++++.++.+++++++++||+++|||+.... .......+. ....+..+.+. + ...++++|+
T Consensus 135 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v 214 (308)
T PRK11150 135 KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYV 214 (308)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeH
Confidence 24577999999999999999888899999999999999975432 222222332 33334333222 2 347899999
Q ss_pred HHHHHhhhcc
Q 026091 233 DDVARAHIFF 242 (243)
Q Consensus 233 ~Dva~a~~~~ 242 (243)
+|+|++++.+
T Consensus 215 ~D~a~a~~~~ 224 (308)
T PRK11150 215 GDVAAVNLWF 224 (308)
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-31 Score=218.14 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=154.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+||||||+||||++++++|+++| ++|++++|+.. ....+. ... ...+++++.+|++|.+.+.++++++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~-~~~~~~--~~~--~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDEL-KQWEMQ--QKF--PAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChh-HHHHHH--HHh--CCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 46899999999999999999999986 78999988432 221111 111 124689999999999999999999999
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+||.... ....+..+.+++|+.++.++++++++.+ +++||++||.... .|
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~-------------------------~p 131 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA-------------------------NP 131 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC-------------------------CC
Confidence 9999997543 1122334889999999999999999998 8999999995311 13
Q ss_pred CchHHhhHHHHHHHHHHHHH---HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc--cccc-cccCcCceeHHH
Q 026091 161 GKSYKLSKTLAERAALEFAE---EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR--EEYS-MLLNISMVHIDD 234 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~---~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~D 234 (243)
.++|+.+|.++|.+++.++. .+|++++++|||++|||+. ..+..+........ .++. +.+.++|+|++|
T Consensus 132 ~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D 206 (324)
T TIGR03589 132 INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQ 206 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHH
Confidence 35699999999999987543 4699999999999999863 23444444443232 2322 356789999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 207 ~a~a~~~a 214 (324)
T TIGR03589 207 GVNFVLKS 214 (324)
T ss_pred HHHHHHHH
Confidence 99998765
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=207.35 Aligned_cols=223 Identities=23% Similarity=0.269 Sum_probs=173.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~ 79 (243)
+.++++||||+||||++.+..+... .++.+.+.. - .-...+..+... .+..+.+++++|+.+...+..++. .+
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idk-L-~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~~~i 81 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDK-L-DYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFETEEI 81 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEee-c-ccccccchhhhh-ccCCCceEeeccccchHHHHhhhccCch
Confidence 4589999999999999999999887 355555543 1 111122222221 245688999999999999988886 58
Q ss_pred cEEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 80 TGVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 80 d~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
|.|+|+|+.... ...+++ ++.+.|+.++..|++.++..|++++|||+||..||++..... ...|.+.++
T Consensus 82 d~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~-~~~E~s~~n------- 152 (331)
T KOG0747|consen 82 DTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA-VVGEASLLN------- 152 (331)
T ss_pred hhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc-cccccccCC-------
Confidence 999999998765 445665 899999999999999999997799999999999998775322 222666543
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCcccccc--ccCcCceeHHH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYSM--LLNISMVHIDD 234 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~v~D 234 (243)
|.++|+.+|+++|..+++|..++|++++++|-++||||++.+. ..++.+.+ +..+.+.++.+ .+.|+|+|++|
T Consensus 153 --PtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD 228 (331)
T KOG0747|consen 153 --PTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVED 228 (331)
T ss_pred --CCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCcceecCcccceeeEeHHH
Confidence 7788999999999999999999999999999999999976544 45555555 33455556665 55899999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+++++..+
T Consensus 229 ~~ea~~~v 236 (331)
T KOG0747|consen 229 VSEAFKAV 236 (331)
T ss_pred HHHHHHHH
Confidence 99997643
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=215.87 Aligned_cols=217 Identities=39% Similarity=0.548 Sum_probs=163.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|+||||+||||++++++|+++|++|++++| ++..... +. ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~---~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~ 71 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-PTSDRRN---LE-----GLDVEIVEGDLRDPASLRKAVAGCRALFHV 71 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEe-cCccccc---cc-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence 37999999999999999999999999999999 4322111 11 236889999999999999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+...... ..+...++.|+.++.++++++++.+ ++++|++||.++|.... ...+.+|+.+..+. .+.+.|+
T Consensus 72 a~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~~~~------~~~~~Y~ 142 (328)
T TIGR03466 72 AADYRLWA-PDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRG-DGTPADETTPSSLD------DMIGHYK 142 (328)
T ss_pred ceecccCC-CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCC-CCCCcCccCCCCcc------cccChHH
Confidence 98654322 3345889999999999999999998 89999999998775432 23456666543211 1234699
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|.+.|++++.++++++++++++||+.+||++...... ....+.....+..+.+ .+...+++|++|+|++++.+
T Consensus 143 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~a~~~~ 217 (328)
T TIGR03466 143 RSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAY-VDTGLNLVHVDDVAEGHLLA 217 (328)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCcee-eCCCcceEEHHHHHHHHHHH
Confidence 999999999999988889999999999999997542211 1122223332222222 24557899999999998754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=217.60 Aligned_cols=224 Identities=19% Similarity=0.226 Sum_probs=161.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|+|+|||||||||++++++|+++|++|++++|...........+... .+.++.++.+|++|.+.+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh--cCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 37999999999999999999999999999887322222111111111 12357889999999999999886 589999
Q ss_pred EeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+..... ..+...+.+++|+.++.++++++++.+ +++||++||.++|+.. ...+++|+.+.. .|.+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~--~~~~~~E~~~~~--------~p~~ 147 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQ--PKIPYVESFPTG--------TPQS 147 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCC--CCCccccccCCC--------CCCC
Confidence 999865431 122335789999999999999999998 8999999998876432 234567776431 2456
Q ss_pred hHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCccc--c--------cc
Q 026091 163 SYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREE--Y--------SM 223 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~--~--------~~ 223 (243)
.|+.+|.++|++++.+++.+ +++++++|++.+||+..... ...++..+.....+.... + .+
T Consensus 148 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 227 (338)
T PRK10675 148 PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227 (338)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCC
Confidence 79999999999999987664 89999999999999753211 112233344444333211 1 12
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.++++|++|+|++++.+
T Consensus 228 ~~~~~~v~v~D~a~~~~~~ 246 (338)
T PRK10675 228 TGVRDYIHVMDLADGHVAA 246 (338)
T ss_pred cEEEeeEEHHHHHHHHHHH
Confidence 5578999999999987654
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=207.08 Aligned_cols=223 Identities=22% Similarity=0.287 Sum_probs=174.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+++|+||||.||||||||++|...||+|++++-......+.+..... ...++.+.-|+..+ ++.++|-|+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~----~~~fel~~hdv~~p-----l~~evD~Iy 96 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG----HPNFELIRHDVVEP-----LLKEVDQIY 96 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc----CcceeEEEeechhH-----HHHHhhhhh
Confidence 458999999999999999999999999999998744433333332211 23556666666544 788899999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|++.++ .........+.+|..++.+.+..|++-+ +||++.||+.+|+.. ..-+..|+.|.+....+ |..
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp--~~hpq~e~ywg~vnpig----pr~ 168 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDP--LVHPQVETYWGNVNPIG----PRS 168 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCc--ccCCCccccccccCcCC----chh
Confidence 99998776 2223335899999999999999999999 899999999988662 34566788777765554 345
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCcccccc--ccCcCceeHHHHHHhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYSM--LLNISMVHIDDVARAH 239 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~v~Dva~a~ 239 (243)
-|...|.++|.++..|.++.|+.+.|.|++++|||.-+..-...+..+. .++.+.+.++.+ .+.|+|.+++|+++++
T Consensus 169 cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegl 248 (350)
T KOG1429|consen 169 CYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGL 248 (350)
T ss_pred hhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHH
Confidence 5999999999999999999999999999999999976655555555544 556666666554 6789999999999999
Q ss_pred hccC
Q 026091 240 IFFT 243 (243)
Q Consensus 240 ~~~~ 243 (243)
+.|+
T Consensus 249 l~Lm 252 (350)
T KOG1429|consen 249 LRLM 252 (350)
T ss_pred HHHh
Confidence 8764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=214.04 Aligned_cols=220 Identities=20% Similarity=0.202 Sum_probs=162.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCc-hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDP-EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
+|+||||||+||++++++|++.| ++|+++.|... ........+. ...+++++.+|++|++++.+++++ +|+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 76 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE----DNPRYRFVKGDIGDRELVSRLFTEHQPDA 76 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc----cCCCcEEEEcCCcCHHHHHHHHhhcCCCE
Confidence 59999999999999999999987 78988876321 1111111111 123688999999999999999987 899
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+....++++|+.++.+++++|++.+...++|++||.++|+... ...+++|..+.. |
T Consensus 77 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~-~~~~~~e~~~~~---------~ 146 (317)
T TIGR01181 77 VVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLE-KGDAFTETTPLA---------P 146 (317)
T ss_pred EEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCC-CCCCcCCCCCCC---------C
Confidence 9999987543 2223345789999999999999999875223899999998765432 222456665432 4
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccc--cccCcCceeHHHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYS--MLLNISMVHIDDVAR 237 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~Dva~ 237 (243)
.+.|+.+|..+|.+++.++.+.+++++++||+.+||+..... ..+..+.. ...+....+. +++.++|+|++|+++
T Consensus 147 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~ 224 (317)
T TIGR01181 147 SSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCR 224 (317)
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHH
Confidence 567999999999999999888899999999999999965432 33444333 3334433332 256789999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
++..+
T Consensus 225 ~~~~~ 229 (317)
T TIGR01181 225 AIYLV 229 (317)
T ss_pred HHHHH
Confidence 98764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=224.69 Aligned_cols=230 Identities=21% Similarity=0.293 Sum_probs=159.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCchhhchhhhhh-c-------------CCC-----CCCCeEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPEQKRDLSFLT-N-------------LPR-----ASERLQI 61 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-~-------------~~~-----~~~~~~~ 61 (243)
+.|+|||||||||+|++++++|++.+ .+|+++.|... ......++. . .+. ...++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~-~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASD-AKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCC-CCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 46899999999999999999998764 46899999443 222221111 0 000 1258999
Q ss_pred EecCCC-------ChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeee
Q 026091 62 FNADLN-------NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVH 134 (243)
Q Consensus 62 ~~~D~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~ 134 (243)
+.+|++ +.+.++++++++|+|||+|+..+.. .+....+++|+.++.+++++|++.+.++++||+||+++|+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG 166 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD--ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG 166 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc--CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence 999998 4455778888999999999986643 3456899999999999999999874389999999999875
Q ss_pred cCCCCcccccCCCCC-----------chh---------------------hh---------hh--cCCCCchHHhhHHHH
Q 026091 135 FSGKDVDMLDETFWS-----------DVD---------------------YI---------RK--LDIWGKSYKLSKTLA 171 (243)
Q Consensus 135 ~~~~~~~~~~e~~~~-----------~~~---------------------~~---------~~--~~~~~~~y~~sK~~~ 171 (243)
.... .+.|..++ +.+ .. .+ ...+.+.|+.||.++
T Consensus 167 ~~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 167 EKSG---LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred CCCc---eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 5321 22222111 000 00 01 223456799999999
Q ss_pred HHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcH------HHHH-HHHhcCccccc--cccCcCceeHHHHHHhhhcc
Q 026091 172 ERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSV------RGTL-AMVMGNREEYS--MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 172 e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~------~~~~-~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~ 242 (243)
|.+++.++ .+++++++||++|||+...+. +.++ ..+. ....+....+. +++.++++||+|+|++++.+
T Consensus 244 E~lv~~~~--~~lpv~i~RP~~V~G~~~~p~-~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a 320 (491)
T PLN02996 244 EMLLGNFK--ENLPLVIIRPTMITSTYKEPF-PGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA 320 (491)
T ss_pred HHHHHHhc--CCCCEEEECCCEeccCCcCCC-CCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence 99998864 489999999999999986553 2221 1121 22233333333 36689999999999998764
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=215.96 Aligned_cols=203 Identities=19% Similarity=0.226 Sum_probs=151.2
Q ss_pred EEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEEee
Q 026091 9 CVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIHVA 86 (243)
Q Consensus 9 lvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a 86 (243)
||||||||||++|++.|++.|++|+++.+ .. .+|++|.+.+.++++ ++|+|||+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~-~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A 57 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT-HK----------------------ELDLTRQADVEAFFAKEKPTYVILAA 57 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec-cc----------------------cCCCCCHHHHHHHHhccCCCEEEEee
Confidence 69999999999999999999998876543 21 479999999999987 479999999
Q ss_pred eccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 87 APIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 87 ~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+.... ...++ .+.++.|+.++.+++++|++.+ ++++||+||.++|+.. ...+++|+++.+. +..|....
T Consensus 58 ~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~~~----~~~p~~~~ 129 (306)
T PLN02725 58 AKVGGIHANMTYP-ADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKF--APQPIPETALLTG----PPEPTNEW 129 (306)
T ss_pred eeecccchhhhCc-HHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCC--CCCCCCHHHhccC----CCCCCcch
Confidence 97542 12233 4789999999999999999999 8999999999876543 2356777653210 11122235
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHH----HH-HhcCcccc-c--cccCcCceeHH
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTL----AM-VMGNREEY-S--MLLNISMVHID 233 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~----~~-~~~~~~~~-~--~~~~~~~i~v~ 233 (243)
|+.+|.++|++++.+.+.++++++++||+.+|||+.... ....+..+. .. ..+.+..+ . +.+.++++|++
T Consensus 130 Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 209 (306)
T PLN02725 130 YAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD 209 (306)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence 999999999999999888899999999999999974321 112222222 22 22333332 2 35678999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|++++++.+
T Consensus 210 Dv~~~~~~~ 218 (306)
T PLN02725 210 DLADAVVFL 218 (306)
T ss_pred HHHHHHHHH
Confidence 999998765
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=212.13 Aligned_cols=194 Identities=17% Similarity=0.056 Sum_probs=146.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|+||||||+||||++++++|+++| +|++++| .. ..+.+|++|.+.+.++++ ++|+||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~-~~-------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi 59 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDV-HS-------------------TDYCGDFSNPEGVAETVRKIRPDVIV 59 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecc-cc-------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence 379999999999999999999999 7888888 32 134689999999999998 589999
Q ss_pred EeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+..... ........++.|+.++.+++++|++.+ + ++||+||..+|++. ...+++|+++.. |.+
T Consensus 60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~--~~~p~~E~~~~~---------P~~ 126 (299)
T PRK09987 60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGT--GDIPWQETDATA---------PLN 126 (299)
T ss_pred ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCC--CCCCcCCCCCCC---------CCC
Confidence 999986652 222334778999999999999999999 4 79999999987543 234677776533 567
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccccc----cCcCceeHHHHHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSML----LNISMVHIDDVAR 237 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~i~v~Dva~ 237 (243)
+|+.+|.++|++++.++ -+.+++||+++|||+.. .++..+.+... +.+..+.++ ..+.+.+++|+++
T Consensus 127 ~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~ 198 (299)
T PRK09987 127 VYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN----NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAH 198 (299)
T ss_pred HHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC----CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHH
Confidence 89999999999998753 35799999999999643 23444444443 334333333 2345566777777
Q ss_pred hhhc
Q 026091 238 AHIF 241 (243)
Q Consensus 238 a~~~ 241 (243)
++..
T Consensus 199 ~~~~ 202 (299)
T PRK09987 199 AIRV 202 (299)
T ss_pred HHHH
Confidence 7654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=203.35 Aligned_cols=226 Identities=22% Similarity=0.273 Sum_probs=173.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
.++||||||+||||+|.+-+|+++|+.|.+++-=.......+.+..+......++.++++|++|.+.++++++ ++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 5789999999999999999999999999999753333344555555544446789999999999999999998 48999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|+|+.-.. ..+++ ..++..|+.++.++++.+++++ ++.+|+.||+.+|+.. ...+++|..+.+ .|
T Consensus 82 ~Hfa~~~~vgeS~~~p-~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p--~~ip~te~~~t~--------~p 149 (343)
T KOG1371|consen 82 MHFAALAAVGESMENP-LSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLP--TKVPITEEDPTD--------QP 149 (343)
T ss_pred EeehhhhccchhhhCc-hhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCc--ceeeccCcCCCC--------CC
Confidence 999997554 34455 4899999999999999999999 9999999999987654 447888887654 25
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeC--CCCCCCC------CCcHHHHHHH---------HhcCccccc-
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG--PFICPQL------AGSVRGTLAM---------VMGNREEYS- 222 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G--~~~~~~~------~~~~~~~~~~---------~~~~~~~~~- 222 (243)
.++|+.+|.++|+++.++...++.+++.+|.++++| |...... ....+..... ..+.+.+..
T Consensus 150 ~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~d 229 (343)
T KOG1371|consen 150 TNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTID 229 (343)
T ss_pred CCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccC
Confidence 678999999999999999988899999999999999 3221111 1111111111 122222222
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
++..|++||+-|.|+..+.+
T Consensus 230 gt~vrdyi~v~Dla~~h~~a 249 (343)
T KOG1371|consen 230 GTIVRDYIHVLDLADGHVAA 249 (343)
T ss_pred CCeeecceeeEehHHHHHHH
Confidence 36789999999999987654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=205.05 Aligned_cols=192 Identities=21% Similarity=0.192 Sum_probs=149.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc--cEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC--TGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~ 84 (243)
+|||||||||||++++++|++.|++|++++|+ .+|+.+.+.+.+++++. |+|||
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~ 56 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVN 56 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999999999999882 36999999999999865 99999
Q ss_pred eeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+..... ........++.|+.++.++++++++.+ . ++|++||.++|.+. ...+++|+.+.+ |.+.
T Consensus 57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~--~~~~~~E~~~~~---------~~~~ 123 (287)
T TIGR01214 57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGE--GKRPYREDDATN---------PLNV 123 (287)
T ss_pred CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCC--CCCCCCCCCCCC---------Ccch
Confidence 99875432 222345788999999999999999988 4 89999999877542 334577776432 3467
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+++.+ +.+++++||+++||++... .+...+.... .+......+++.++++|++|+|+++..+
T Consensus 124 Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~ 196 (287)
T TIGR01214 124 YGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAAL 196 (287)
T ss_pred hhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC---CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHH
Confidence 999999999998874 6799999999999997421 2233333332 3333333346678999999999998765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=201.63 Aligned_cols=223 Identities=26% Similarity=0.346 Sum_probs=130.7
Q ss_pred EecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhh-cCC----------CCCCCeEEEecCCCCh------h
Q 026091 10 VTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLT-NLP----------RASERLQIFNADLNNP------E 70 (243)
Q Consensus 10 vtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~D~~d~------~ 70 (243)
|||||||+|++++++|++++. +|+++.|.. +.....+++. .+. ...++++++.+|++++ +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~-~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRAS-SSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SS-SHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCc-ccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 799999999999999999986 899999944 3222222231 111 0157999999999975 5
Q ss_pred hHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCC-C
Q 026091 71 SFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW-S 149 (243)
Q Consensus 71 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~-~ 149 (243)
.+.++.+++|+|||+||..+.. .+..++.+.|+.|+.++++.|.+.. .++|+|+||+. ..+... ....|... .
T Consensus 80 ~~~~L~~~v~~IiH~Aa~v~~~--~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~-v~~~~~--~~~~~~~~~~ 153 (249)
T PF07993_consen 80 DYQELAEEVDVIIHCAASVNFN--APYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAY-VAGSRP--GTIEEKVYPE 153 (249)
T ss_dssp HHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG-GTTS-T--TT--SSS-HH
T ss_pred Hhhccccccceeeecchhhhhc--ccchhhhhhHHHHHHHHHHHHHhcc-CcceEEecccc-ccCCCC--Cccccccccc
Confidence 7788888999999999987764 3445688999999999999999776 56999999943 222221 12222111 0
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CC-cHHHHHHHHh-cCcccccc--
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AG-SVRGTLAMVM-GNREEYSM-- 223 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~-~~~~~~~~~~-~~~~~~~~-- 223 (243)
..........+.+.|.+||.++|+++++.+++.|++++|+|||.|+|....... .. ....+..... +.-+....
T Consensus 154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 233 (249)
T PF07993_consen 154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP 233 (249)
T ss_dssp H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence 111111223355689999999999999998888999999999999995443332 22 2222332222 22222222
Q ss_pred ccCcCceeHHHHHHhh
Q 026091 224 LLNISMVHIDDVARAH 239 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~ 239 (243)
+...++++||.+|++|
T Consensus 234 ~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 234 DARLDLVPVDYVARAI 249 (249)
T ss_dssp -TT--EEEHHHHHHHH
T ss_pred CceEeEECHHHHHhhC
Confidence 3468999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=202.61 Aligned_cols=220 Identities=23% Similarity=0.262 Sum_probs=159.2
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 84 (243)
+||||||||+||++++++|+++|++|+++.|.............. ..+++++.+|+.+.+.+.++++ ++|+|||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~ 76 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER----ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH 76 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc----ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 589999999999999999999999998886633222212111111 1157889999999999999987 6899999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+||.... .......+.++.|+.++.++++++++.+ ++++|++||.++|+.. ...+++|+.+.. |.+.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~--~~~~~~e~~~~~---------~~~~ 144 (328)
T TIGR01179 77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEP--SSIPISEDSPLG---------PINP 144 (328)
T ss_pred CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCC--CCCCccccCCCC---------CCCc
Confidence 9997543 1122334788999999999999999988 8899999998766322 233566765432 4567
Q ss_pred HHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCC-------CCCcHHHHHHHHhcCc--ccc--------cccc
Q 026091 164 YKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMVMGNR--EEY--------SMLL 225 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~--~~~--------~~~~ 225 (243)
|+.+|..+|.+++.++.+ .+++++++||+.+||+..... ....+..+.....+.. ..+ .+.+
T Consensus 145 y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (328)
T TIGR01179 145 YGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTC 224 (328)
T ss_pred hHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCce
Confidence 999999999999998877 799999999999999854321 1122333333333221 111 1245
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.++|||++|+++++..+
T Consensus 225 ~~~~v~~~D~a~~~~~~ 241 (328)
T TIGR01179 225 VRDYIHVMDLADAHLAA 241 (328)
T ss_pred EEeeeeHHHHHHHHHHH
Confidence 67999999999998754
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=201.47 Aligned_cols=211 Identities=19% Similarity=0.200 Sum_probs=150.9
Q ss_pred EEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----cccEE
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GCTGV 82 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~v 82 (243)
|||||||||||++++++|.+.|+ +|.+++|... .. ... .. ....+..|+.+.+.++.+.+ ++|+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~-~~-~~~---~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~v 70 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRD-GH-KFL---NL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAI 70 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCC-ch-hhh---hh-----hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence 69999999999999999999997 7888876332 11 111 11 12456788888888887764 79999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+|+.......+ ....+++|+.++.+++++|++.+ + +|||+||.++|.... .+++|+.+. ..|.+
T Consensus 71 vh~A~~~~~~~~~-~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~---~~~~e~~~~--------~~p~~ 136 (314)
T TIGR02197 71 FHQGACSDTTETD-GEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGE---AGFREGREL--------ERPLN 136 (314)
T ss_pred EECccccCccccc-hHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCC---CCcccccCc--------CCCCC
Confidence 9999975543333 45889999999999999999988 5 799999998765432 234444321 12456
Q ss_pred hHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCCCCCCC--CCCcHHHHH-HHHhcCcccc--------ccccCcCc
Q 026091 163 SYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGPFICPQ--LAGSVRGTL-AMVMGNREEY--------SMLLNISM 229 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~ 229 (243)
.|+.+|..+|.+++++... .+++++++||+.+||++.... ...++..+. ....+....+ .+++.+++
T Consensus 137 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 216 (314)
T TIGR02197 137 VYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF 216 (314)
T ss_pred HHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence 7999999999999875432 368999999999999975422 223333333 3334443322 13456899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+++++..+
T Consensus 217 i~v~D~a~~i~~~ 229 (314)
T TIGR02197 217 VYVKDVVDVNLWL 229 (314)
T ss_pred EEHHHHHHHHHHH
Confidence 9999999998765
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=192.98 Aligned_cols=190 Identities=21% Similarity=0.187 Sum_probs=157.6
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 84 (243)
+|||||++|++|.+|++.|. .+++|++++|.+ .|++|++.+.++++ ++|+|||
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhhCCCEEEE
Confidence 49999999999999999887 669999999822 59999999999998 4799999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.... ..+.+....+.+|..++.++.++|++.| .++||+||..|+.+. ...++.|++.++ |.+.
T Consensus 57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~--~~~~Y~E~D~~~---------P~nv 123 (281)
T COG1091 57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGE--KGGPYKETDTPN---------PLNV 123 (281)
T ss_pred CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCC--CCCCCCCCCCCC---------Chhh
Confidence 9998776 3444456899999999999999999999 699999999876555 346788888765 6688
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC-ccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN-REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
||+||.++|..++.. +-+..|+|.+++||... ..++..+++..... ......++..+++++.|+|+++..+
T Consensus 124 YG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~l 195 (281)
T COG1091 124 YGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILEL 195 (281)
T ss_pred hhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHH
Confidence 999999999999884 45799999999999865 34466666665444 3444458888999999999998764
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=202.09 Aligned_cols=222 Identities=26% Similarity=0.296 Sum_probs=164.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++.+++||||+||+|.|++++|++.+ .+|.+++............... ...+++.+++|+.|...+...+.++ .
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~~~~-~ 78 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAFQGA-V 78 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhccCc-e
Confidence 46799999999999999999999998 8899888833211111111110 1457899999999999999999999 8
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|+|+|+...+ ....+....++.|+.||.+++++|++.+ ++++||+||.+|+.+..+ ...-+|+.+.. ..+
T Consensus 79 Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p-------~~~ 149 (361)
T KOG1430|consen 79 VVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP-IINGDESLPYP-------LKH 149 (361)
T ss_pred EEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee-cccCCCCCCCc-------ccc
Confidence 8888876544 2333456899999999999999999999 999999999999877654 23334444322 123
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc---cccCcCceeHHHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS---MLLNISMVHIDDVAR 237 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~ 237 (243)
..+|+.||..+|+++++.+...++.++++||..||||+.....+.. ..........+. .....++.++..+|-
T Consensus 150 ~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i----~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ 225 (361)
T KOG1430|consen 150 IDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKI----VEALKNGGFLFKIGDGENLNDFTYGENVAW 225 (361)
T ss_pred ccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHH----HHHHHccCceEEeeccccccceEEechhHH
Confidence 3569999999999999966556799999999999999876554333 333333332222 145678999998888
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+.+.+
T Consensus 226 ahilA 230 (361)
T KOG1430|consen 226 AHILA 230 (361)
T ss_pred HHHHH
Confidence 76543
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=201.55 Aligned_cols=188 Identities=19% Similarity=0.218 Sum_probs=140.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|+|||||||+|++++++|+++||+|++++| +.+.. ..+. ..+++++.+|++|++++.++++++|+|||+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R-~~~~~---~~l~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~ 71 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVR-NLRKA---SFLK-----EWGAELVYGDLSLPETLPPSFKGVTAIIDA 71 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-ChHHh---hhHh-----hcCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence 37999999999999999999999999999999 44222 1111 136899999999999999999999999998
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
++... .++ ..+++.|+.++.+++++|++.+ +++|||+||.+.. .. +..+|.
T Consensus 72 ~~~~~---~~~-~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~-~~-----------------------~~~~~~ 122 (317)
T CHL00194 72 STSRP---SDL-YNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAE-QY-----------------------PYIPLM 122 (317)
T ss_pred CCCCC---CCc-cchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccc-cc-----------------------CCChHH
Confidence 76422 122 3578889999999999999999 9999999985421 11 113489
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|..+|.+++. ++++++++||+.+|+...... ......+.+..+. .++.++++|++|+|+++..+
T Consensus 123 ~~K~~~e~~l~~----~~l~~tilRp~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 189 (317)
T CHL00194 123 KLKSDIEQKLKK----SGIPYTIFRLAGFFQGLISQY-------AIPILEKQPIWITNESTPISYIDTQDAAKFCLKS 189 (317)
T ss_pred HHHHHHHHHHHH----cCCCeEEEeecHHhhhhhhhh-------hhhhccCCceEecCCCCccCccCHHHHHHHHHHH
Confidence 999999987754 699999999999886421110 1111122222222 35678999999999998754
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=202.40 Aligned_cols=192 Identities=25% Similarity=0.252 Sum_probs=142.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 83 (243)
||||||||+|++|+++.+.|.++|++|+++.|. ..|++|.+.+.++++. +|+||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vi 56 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVI 56 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence 489999999999999999999999999999772 4599999999999874 89999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+||..+. .+.......+.+|+.++.+|.+.|++.+ .++||+||..|+.+. ...+++|+++.+ |.+
T Consensus 57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~--~~~~y~E~d~~~---------P~~ 123 (286)
T PF04321_consen 57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGD--KGGPYTEDDPPN---------PLN 123 (286)
T ss_dssp E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SS--TSSSB-TTS-------------SS
T ss_pred ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCC--cccccccCCCCC---------CCC
Confidence 99998664 1222345899999999999999999999 599999999987655 445678887654 668
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccccccCcCceeHHHHHHhhhc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
.||.+|.++|+.++... . +..|+|++++||+.. ..++.++..... ++......+..++++|++|+|+++..
T Consensus 124 ~YG~~K~~~E~~v~~~~---~-~~~IlR~~~~~g~~~----~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~ 195 (286)
T PF04321_consen 124 VYGRSKLEGEQAVRAAC---P-NALILRTSWVYGPSG----RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILE 195 (286)
T ss_dssp HHHHHHHHHHHHHHHH----S-SEEEEEE-SEESSSS----SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---C-CEEEEecceecccCC----CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHH
Confidence 89999999999998843 2 799999999999932 244666655553 44455555888899999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 196 l 196 (286)
T PF04321_consen 196 L 196 (286)
T ss_dssp H
T ss_pred H
Confidence 5
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=195.41 Aligned_cols=202 Identities=19% Similarity=0.186 Sum_probs=144.9
Q ss_pred EEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeE----EEecCCCChhhHHHHhc--ccc
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQ----IFNADLNNPESFDAAIA--GCT 80 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~~d~~~~~~~~~--~~d 80 (243)
||||||+|.||+.||++|++.+ .++++++| ++.....+...-.....+.++. .+.+|++|.+.+.++++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~-~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDR-DENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES--HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCC-ChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 7999999999999999999988 68999999 5543333322211001123343 46899999999999999 899
Q ss_pred EEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 81 GVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 81 ~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|+||.-+. ...+| .+++++|+.||.|++++|.+++ ++++|++||..++
T Consensus 80 iVfHaAA~KhVpl~E~~p-~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv------------------------- 132 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNP-FEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAV------------------------- 132 (293)
T ss_dssp EEEE------HHHHCCCH-HHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCS-------------------------
T ss_pred EEEEChhcCCCChHHhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccC-------------------------
Confidence 99999997554 34455 4999999999999999999999 9999999997653
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCcccccc-ccCcCceeHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSM-LLNISMVHID 233 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~i~v~ 233 (243)
.|.|.||.||..+|.++..++... +.+++++|+|+|+|.. ...++.+.+.+. +.+.++.. +..|-|+.++
T Consensus 133 ~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~ 207 (293)
T PF02719_consen 133 NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIE 207 (293)
T ss_dssp S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HH
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHH
Confidence 255789999999999999987655 6899999999999973 345777776664 44555554 7788899999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
++++.++.+
T Consensus 208 EAv~Lvl~a 216 (293)
T PF02719_consen 208 EAVQLVLQA 216 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-27 Score=198.47 Aligned_cols=206 Identities=21% Similarity=0.210 Sum_probs=163.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhcc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAG--C 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~ 79 (243)
.+|+|+||||+|.||+.+|+++++.+ .+++.++| ++........ +... ....++.++.+|++|.+.+.+++++ +
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~-~E~~~~~i~~el~~~-~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSR-DEYKLYLIDMELREK-FPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecC-chHHHHHHHHHHHhh-CCCcceEEEecccccHHHHHHHHhcCCC
Confidence 57999999999999999999999988 57888888 5443333222 2221 1246889999999999999999998 9
Q ss_pred cEEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 80 TGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 80 d~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
|+|+|+||.-+. ..+..+.+.+.+|+.||.|++++|.+.+ ++++|.+||..++.
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~------------------------ 381 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVN------------------------ 381 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccC------------------------
Confidence 999999997554 3344456999999999999999999999 99999999976542
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCcccccc-ccCcCceeHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSM-LLNISMVHID 233 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~i~v~ 233 (243)
|.|.||.||.++|.++..+++.. +.+++.+|+|+|.|.. ...++.+.+.+. |.+.++.. +..|-|..+.
T Consensus 382 -PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~ 455 (588)
T COG1086 382 -PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIP 455 (588)
T ss_pred -CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccccCCCceeEEEEHH
Confidence 55789999999999999987643 3899999999999984 345677776664 44444443 6678888888
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|.++.++.+
T Consensus 456 EAv~LVlqA 464 (588)
T COG1086 456 EAVQLVLQA 464 (588)
T ss_pred HHHHHHHHH
Confidence 888887654
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=197.98 Aligned_cols=224 Identities=21% Similarity=0.268 Sum_probs=153.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhh----cC--C--CCC-CCeEEEecCCCCh------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLT----NL--P--RAS-ERLQIFNADLNNP------ 69 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~----~~--~--~~~-~~~~~~~~D~~d~------ 69 (243)
+|+|||||||||++++++|+++| ++|++++|+.. .......+. .. . ... .+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS-EEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC-HHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 58999999999999999999998 67999999433 211111111 00 0 001 4799999999764
Q ss_pred hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 70 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+.+.++.+++|+|||+|+..+.. .+.....+.|+.++.+++++|.+.+ +++|+|+||.+++..... .+..|+.+.
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~--~~~~~~~~~ 154 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDL--STVTEDDAI 154 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCC--CCccccccc
Confidence 56777778899999999976542 3455788899999999999999988 888999999987754321 112333221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHHHHHHHHhcCcccccc-c-c
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMVMGNREEYSM-L-L 225 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~-~ 225 (243)
.. ....+.+.|+.+|.++|.+++.+.+ .|++++++|||.++|+....... ..+..+........ .++. . .
T Consensus 155 ~~----~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-~~p~~~~~ 228 (367)
T TIGR01746 155 VT----PPPGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-AYPDSPEL 228 (367)
T ss_pred cc----cccccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-CCCCCCcc
Confidence 11 1112345799999999999998654 49999999999999974333211 22222222211111 1121 2 2
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.++++|++|+|++++.+
T Consensus 229 ~~~~~~vddva~ai~~~ 245 (367)
T TIGR01746 229 TEDLTPVDYVARAIVAL 245 (367)
T ss_pred ccCcccHHHHHHHHHHH
Confidence 56899999999998764
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=192.78 Aligned_cols=225 Identities=23% Similarity=0.263 Sum_probs=158.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhc-CC-------CCCCCeEEEecCCCC------hh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTN-LP-------RASERLQIFNADLNN------PE 70 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~D~~d------~~ 70 (243)
+++|+||||||+|.+++.+|+.+- .+|+|++|. .+.+....++.+ .. .+.++++.+.+|+.. ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA-~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRA-QSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEec-CCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 479999999999999999999875 599999994 443333344432 11 357789999999984 46
Q ss_pred hHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCC--CC
Q 026091 71 SFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDET--FW 148 (243)
Q Consensus 71 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~--~~ 148 (243)
.+.++.+.+|.|||+|+..++. .|..+....|+.||..+++.|...+ .|.+.|+||.++...........+++ ++
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~ 156 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISP 156 (382)
T ss_pred HHHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccc
Confidence 8999999999999999988765 4556889999999999999998877 88999999999765443222222222 11
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCccccccccC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
.. ..-..+.++|++||+++|.++++-. +.|++++|+|||.|.|+...+.+ ..+...+.+....-...-.....
T Consensus 157 ~~----~~~~~~~~GY~~SKwvaE~Lvr~A~-~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~ 231 (382)
T COG3320 157 TR----NVGQGLAGGYGRSKWVAEKLVREAG-DRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYS 231 (382)
T ss_pred cc----cccCccCCCcchhHHHHHHHHHHHh-hcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccc
Confidence 11 1122356789999999999999965 44999999999999999774442 33333444433322221111333
Q ss_pred cCceeHHHHHHhh
Q 026091 227 ISMVHIDDVARAH 239 (243)
Q Consensus 227 ~~~i~v~Dva~a~ 239 (243)
++++.+++++.++
T Consensus 232 ~~~~p~~~v~~~v 244 (382)
T COG3320 232 LDMLPVDHVARAV 244 (382)
T ss_pred hhhCccceeeEEe
Confidence 4555555555443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=211.96 Aligned_cols=218 Identities=25% Similarity=0.244 Sum_probs=151.8
Q ss_pred CeEEEecCchhhHHHHHHHHH--HcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh------hhHHHHhc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLL--DHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP------ESFDAAIA 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~ 77 (243)
|+|||||||||||++++++|+ +.|++|++++|+ .... .+..+... ....+++++.+|++|+ +.+.++ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~-~~~~-~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRR-QSLS-RLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECc-chHH-HHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 379999999999999999999 578999999994 3221 11111110 0114789999999984 455555 8
Q ss_pred cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 78 GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
++|+|||+|+..+.. .+.....++|+.++.+++++|++.+ +++|||+||.++++... ...+|+.+..+
T Consensus 77 ~~D~Vih~Aa~~~~~--~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~---~~~~e~~~~~~------ 144 (657)
T PRK07201 77 DIDHVVHLAAIYDLT--ADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYE---GVFREDDFDEG------ 144 (657)
T ss_pred CCCEEEECceeecCC--CCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCcc---Cccccccchhh------
Confidence 899999999976543 2335788999999999999999998 89999999998764332 23444433211
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCC-----cHHHHHHHHhcCcc--cc--ccccCcC
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAG-----SVRGTLAMVMGNRE--EY--SMLLNIS 228 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~-----~~~~~~~~~~~~~~--~~--~~~~~~~ 228 (243)
..+.++|+.+|.++|.++++ ..|++++++||+.+||+........ .+..+.......+. .. ...+.++
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN 221 (657)
T ss_pred cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee
Confidence 12346799999999999875 3589999999999999865432211 11111111111111 11 1245679
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
++|++|+++++..+
T Consensus 222 ~v~vddva~ai~~~ 235 (657)
T PRK07201 222 IVPVDYVADALDHL 235 (657)
T ss_pred eeeHHHHHHHHHHH
Confidence 99999999998754
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=184.78 Aligned_cols=209 Identities=19% Similarity=0.189 Sum_probs=147.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|++|||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++++|++|.+.+.+++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK---AGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh---cCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999999944322222222222 234688899999999998887763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHH----HHHHHHHH-HhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSG----TIGILKSC-LKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|+|||+||.... ...+.+...+++|+.+ +.++++.+ ++.+ .++||++||.....+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~---------- 151 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS---------- 151 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC----------
Confidence 7999999987543 1223455678899999 55566666 5555 7899999996543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-------HHHHHHHHhc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-------VRGTLAMVMG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-------~~~~~~~~~~ 216 (243)
++...|+.+|.+.+.+++.++++ .+++++++||+.++++.....+... .......+.+
T Consensus 152 ------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T PRK13394 152 ------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML 219 (262)
T ss_pred ------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence 12345999999999999998876 4899999999999998543221110 0111111111
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ...+++++++|+++++++++
T Consensus 220 ~~-----~~~~~~~~~~dva~a~~~l~ 241 (262)
T PRK13394 220 GK-----TVDGVFTTVEDVAQTVLFLS 241 (262)
T ss_pred cC-----CCCCCCCCHHHHHHHHHHHc
Confidence 11 22348999999999988763
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=195.27 Aligned_cols=198 Identities=15% Similarity=0.091 Sum_probs=143.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~ 79 (243)
++++|+||||||+||++++++|+++|++|++++|+ ..................+++++.+|++|++++.++++ ++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE-KSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec-hhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45799999999999999999999999999999994 32211000000000112478999999999999999998 58
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|+||||++...... ...+++|+.++.++++++++.+ +++||++||.+++.
T Consensus 138 D~Vi~~aa~~~~~~----~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~------------------------- 187 (390)
T PLN02657 138 DVVVSCLASRTGGV----KDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK------------------------- 187 (390)
T ss_pred cEEEECCccCCCCC----ccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC-------------------------
Confidence 99999988533211 2457789999999999999999 99999999976431
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc--Cc-CceeHHHHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL--NI-SMVHIDDVA 236 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~i~v~Dva 236 (243)
|...|..+|...|..++. ...+++++++||+.+||+.. . .+.....+.+..+.+++ .+ ++||++|+|
T Consensus 188 p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~-----~---~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA 257 (390)
T PLN02657 188 PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG-----G---QVEIVKDGGPYVMFGDGKLCACKPISEADLA 257 (390)
T ss_pred cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH-----H---HHHhhccCCceEEecCCcccccCceeHHHHH
Confidence 123488999999998875 35799999999999998521 1 11122233333333333 23 579999999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
+++..+
T Consensus 258 ~~i~~~ 263 (390)
T PLN02657 258 SFIADC 263 (390)
T ss_pred HHHHHH
Confidence 987754
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=183.65 Aligned_cols=190 Identities=16% Similarity=0.160 Sum_probs=129.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
+.|+||||||+||||++|+++|+++|++|+...+ |+.|.+.+...++ ++|+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~---------------------------~~~~~~~v~~~l~~~~~D~ 60 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG---------------------------RLENRASLEADIDAVKPTH 60 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC---------------------------ccCCHHHHHHHHHhcCCCE
Confidence 3478999999999999999999999999864322 2334455555554 6899
Q ss_pred EEEeeeccCCC----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC----CcccccCCCCCchhh
Q 026091 82 VIHVAAPIDIH----GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK----DVDMLDETFWSDVDY 153 (243)
Q Consensus 82 vi~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~----~~~~~~e~~~~~~~~ 153 (243)
|||+||..... ......+.+++|+.++.+++++|++.+ ++ ++++||.++|.+... ...+++|++++
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p---- 134 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTP---- 134 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCC----
Confidence 99999976431 122345899999999999999999998 75 566777666643211 12235655432
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHH
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHID 233 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 233 (243)
.++.+.|+.+|.++|.+++.++ +..++|+...+|+.... . ...+.....+....+. ..+++|++
T Consensus 135 ----~~~~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~-~---~~fi~~~~~~~~~~~~---~~s~~yv~ 198 (298)
T PLN02778 135 ----NFTGSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSN-P---RNFITKITRYEKVVNI---PNSMTILD 198 (298)
T ss_pred ----CCCCCchHHHHHHHHHHHHHhh-----ccEEeeecccCCccccc-H---HHHHHHHHcCCCeeEc---CCCCEEHH
Confidence 2345789999999999999875 36678887777764221 0 1112233333332221 23799999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|++++++.+
T Consensus 199 D~v~al~~~ 207 (298)
T PLN02778 199 ELLPISIEM 207 (298)
T ss_pred HHHHHHHHH
Confidence 999998764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-26 Score=197.68 Aligned_cols=231 Identities=18% Similarity=0.198 Sum_probs=156.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhh-cC-------------CC-----CCCCeEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLT-NL-------------PR-----ASERLQI 61 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~-------------~~-----~~~~~~~ 61 (243)
+.|+|||||||||+|++|+++|++.+. +|+++.|. .......+++. .. +. ...++++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~-k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKA-KDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEec-CCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 468999999999999999999998753 68999994 32222222221 00 00 1357999
Q ss_pred EecCCCCh------hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeec
Q 026091 62 FNADLNNP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHF 135 (243)
Q Consensus 62 ~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~ 135 (243)
+.+|++++ +..+.+.+++|+|||+|+..+.. .+....+++|+.++.++++.|++.+.+++|||+||+++++.
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~--~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~ 274 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD--ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ 274 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc--cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence 99999987 46667778899999999986643 44568999999999999999998754789999999987755
Q ss_pred CCCCcccccCCCCC----------------------chhh---------h---------h----------hcCCCCchHH
Q 026091 136 SGKDVDMLDETFWS----------------------DVDY---------I---------R----------KLDIWGKSYK 165 (243)
Q Consensus 136 ~~~~~~~~~e~~~~----------------------~~~~---------~---------~----------~~~~~~~~y~ 165 (243)
.. +.+.|..++ +++. . . .+..+.+.|.
T Consensus 275 ~~---G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 275 RQ---GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred CC---CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 42 233333221 1000 0 0 1234568899
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC------CCcHHHHHHHHhcCcccccc--ccCcCceeHHHHHH
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL------AGSVRGTLAMVMGNREEYSM--LLNISMVHIDDVAR 237 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~ 237 (243)
.||..+|.++++.. .+++++|+||+.|.+....+.. ....+.......|.-..+.+ +...++|+||.+++
T Consensus 352 ~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn 429 (605)
T PLN02503 352 FTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN 429 (605)
T ss_pred HHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence 99999999999743 5899999999999442221110 00111111111222122222 55789999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+++.+
T Consensus 430 a~i~a 434 (605)
T PLN02503 430 ATLAA 434 (605)
T ss_pred HHHHH
Confidence 98765
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=177.25 Aligned_cols=226 Identities=19% Similarity=0.189 Sum_probs=175.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhcCCCC-CCCeEEEecCCCChhhHHHHhc--cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNLPRA-SERLQIFNADLNNPESFDAAIA--GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~--~~ 79 (243)
++|+.||||-||+-|++|++.|+++||+|.++.|++.. ..... .+...+.. +.+++.+.+|++|...+.++++ ++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 36899999999999999999999999999999995433 22222 33333332 3358999999999999999998 57
Q ss_pred cEEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 80 TGVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 80 d~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
|-|+|+||+.+. ++.+|. ...+++..|+.+|+++.+-.++ -.+|...||+.-|+.. ...+.+|..|..
T Consensus 80 dEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v--~~~pq~E~TPFy------ 150 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLV--QEIPQKETTPFY------ 150 (345)
T ss_pred hhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCc--ccCccccCCCCC------
Confidence 999999998765 455654 8999999999999999999873 2366666766544333 456677877654
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCccccc---cccCcCcee
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEYS---MLLNISMVH 231 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~i~ 231 (243)
|.+||+.+|..+..+...|.+.+|+-.+.=..++.-+|.+...+ .++.....+...|.+..+. .+..|||-|
T Consensus 151 ---PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~ 227 (345)
T COG1089 151 ---PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGH 227 (345)
T ss_pred ---CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccc
Confidence 77889999999999999999999998888888888888766552 3444555555666665444 277999999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
+.|.+++++.+
T Consensus 228 A~DYVe~mwlm 238 (345)
T COG1089 228 AKDYVEAMWLM 238 (345)
T ss_pred hHHHHHHHHHH
Confidence 99999998765
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=172.29 Aligned_cols=180 Identities=32% Similarity=0.418 Sum_probs=136.0
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEeee
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVAA 87 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 87 (243)
|+|+||||++|++++++|+++|++|++++| ++..... ..+++++.+|+.|++.+.++++++|+|||+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R-~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVR-SPSKAED----------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEES-SGGGHHH----------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEec-Cchhccc----------ccccccceeeehhhhhhhhhhhhcchhhhhhh
Confidence 799999999999999999999999999999 5533222 24899999999999999999999999999986
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhh
Q 026091 88 PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLS 167 (243)
Q Consensus 88 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~s 167 (243)
+... +...+.++++++++.+ +++++++||.+++...... ...+.. +....|...
T Consensus 70 ~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~--~~~~~~-----------~~~~~~~~~ 123 (183)
T PF13460_consen 70 PPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGL--FSDEDK-----------PIFPEYARD 123 (183)
T ss_dssp STTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSE--EEGGTC-----------GGGHHHHHH
T ss_pred hhcc------------cccccccccccccccc-cccceeeeccccCCCCCcc--cccccc-----------cchhhhHHH
Confidence 5332 1667889999999999 9999999998865432211 011110 011348899
Q ss_pred HHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 168 KTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 168 K~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|..+|+.++. .+++++++||+.+||+..... .... . ......++||.+|+|++++.+
T Consensus 124 ~~~~e~~~~~----~~~~~~ivrp~~~~~~~~~~~--~~~~-------~-----~~~~~~~~i~~~DvA~~~~~~ 180 (183)
T PF13460_consen 124 KREAEEALRE----SGLNWTIVRPGWIYGNPSRSY--RLIK-------E-----GGPQGVNFISREDVAKAIVEA 180 (183)
T ss_dssp HHHHHHHHHH----STSEEEEEEESEEEBTTSSSE--EEES-------S-----TSTTSHCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHh----cCCCEEEEECcEeEeCCCcce--eEEe-------c-----cCCCCcCcCCHHHHHHHHHHH
Confidence 9888887753 599999999999999963311 1000 0 113334899999999999865
|
... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=182.59 Aligned_cols=203 Identities=22% Similarity=0.188 Sum_probs=134.5
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEeee
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVAA 87 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 87 (243)
|||||||||||+++++.|+++|++|++++|+.. ...... ... ..|+.. ..+.+.++++|+|||+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----------~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPP-AGANTK----------WEG--YKPWAP-LAESEALEGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCC-CCCccc----------cee--eecccc-cchhhhcCCCCEEEECCC
Confidence 699999999999999999999999999999433 221111 001 112222 445667788999999998
Q ss_pred ccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 88 PIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSGTVK--RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 88 ~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
.... ...+....++++|+.++.++++++++.+ ++ ++++.||.++|+.. ...+++|+.+.. +..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~--~~~~~~E~~~~~---------~~~ 134 (292)
T TIGR01777 67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTS--EDRVFTEEDSPA---------GDD 134 (292)
T ss_pred CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCC--CCCCcCcccCCC---------CCC
Confidence 6542 1122345788999999999999999998 53 45556665544322 234567775321 223
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccc-cccCcCceeHHHHHHhhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYS-MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~v~Dva~a~~ 240 (243)
.|+..+...|..+... ++++++++++||+.+|||... . ...+..... .....+. +++.++++|++|+|+++.
T Consensus 135 ~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~-~----~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~ 208 (292)
T TIGR01777 135 FLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG-A----LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLIL 208 (292)
T ss_pred hHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc-h----hHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHH
Confidence 4666676777776653 456899999999999999632 1 111111111 1111122 366789999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 209 ~~ 210 (292)
T TIGR01777 209 FA 210 (292)
T ss_pred HH
Confidence 65
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-25 Score=178.61 Aligned_cols=202 Identities=20% Similarity=0.186 Sum_probs=143.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
.|++|||||+|+||++++++|+++|++|+++.| +.+....+. .. ...++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r-~~~~~~~~~---~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVR-RPDALDDLK---AR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH---Hh--ccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999 543322221 11 12468899999999998888765
Q ss_pred cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||..... +.+.+...+++|+.++.++++++ ++.+ .++||++||.+.....
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------ 142 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY------------ 142 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC------------
Confidence 379999999875431 12345678889999999999987 4445 6799999996543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCce---eCCCCCCC--CC----CcHHHHHHHHhc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFV---TGPFICPQ--LA----GSVRGTLAMVMG 216 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i---~G~~~~~~--~~----~~~~~~~~~~~~ 216 (243)
++.+.|+.+|.+.|.+++.++++ +|++++++|||.+ ||++.... .. .....+......
T Consensus 143 ----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (276)
T PRK06482 143 ----------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD 212 (276)
T ss_pred ----------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh
Confidence 12356999999999999998866 5999999999998 55432211 00 011112222222
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. +. -+.+++|++++++.+
T Consensus 213 ~~--~~-----~~~d~~~~~~a~~~~ 231 (276)
T PRK06482 213 GS--FA-----IPGDPQKMVQAMIAS 231 (276)
T ss_pred cc--CC-----CCCCHHHHHHHHHHH
Confidence 11 11 246899999998764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-25 Score=175.29 Aligned_cols=204 Identities=21% Similarity=0.211 Sum_probs=147.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||||++|++++++|+++|++|+++.|+........... ....+.+++++.+|+.|.+++.++++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEA--VEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH--HHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999999999988888544322222111 11124568999999999999888875
Q ss_pred -cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||..... ..+.+...++.|+.++.++++.+ ++.+ .+++|++||...+.+..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~---------- 151 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP---------- 151 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC----------
Confidence 469999999964431 23345678899999999998887 4456 78999999987653321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+++.++++ .+++++++|||.++|+........ ..... .......
T Consensus 152 ------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~~~~~--~~~~~~~-- 212 (249)
T PRK12825 152 ------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE---AREAK--DAETPLG-- 212 (249)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch---hHHhh--hccCCCC--
Confidence 1245999999999999888765 589999999999999864433211 11111 0111222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+++++.++
T Consensus 213 ---~~~~~~dva~~~~~~ 227 (249)
T PRK12825 213 ---RSGTPEDIARAVAFL 227 (249)
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 589999999998775
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=189.35 Aligned_cols=195 Identities=19% Similarity=0.229 Sum_probs=136.7
Q ss_pred CCCeEEEe----cCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-----hhhcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVT----GGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-----FLTNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++++|||| |||||||++++++|+++||+|++++|+... ..... .+... ...+++++.+|+.| +.+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d---~~~ 124 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSEL--SSAGVKTVWGDPAD---VKS 124 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc-hhhhccCchhhhhHh--hhcCceEEEecHHH---HHh
Confidence 56799999 999999999999999999999999994432 11110 00010 11358999999987 444
Q ss_pred Hh--ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 75 AI--AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 75 ~~--~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
++ .++|+|||+++. +..++.+++++|++.| +++|||+||.++|... ...+..|..+..
T Consensus 125 ~~~~~~~d~Vi~~~~~---------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~--~~~p~~E~~~~~-- 184 (378)
T PLN00016 125 KVAGAGFDVVYDNNGK---------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKS--DEPPHVEGDAVK-- 184 (378)
T ss_pred hhccCCccEEEeCCCC---------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCC--CCCCCCCCCcCC--
Confidence 44 468999998652 1335789999999999 9999999999876543 223445554321
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccc--cccCcCc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYS--MLLNISM 229 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~ 229 (243)
++. +|..+|.+++. .+++++++||+.+||++.... ...++.. ...+.+..+. +.+.+++
T Consensus 185 ----------p~~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~---~~~~~~~~~~~~~~i~~~g~g~~~~~~ 246 (378)
T PLN00016 185 ----------PKA-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKD---CEEWFFDRLVRGRPVPIPGSGIQLTQL 246 (378)
T ss_pred ----------Ccc-hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCc---hHHHHHHHHHcCCceeecCCCCeeece
Confidence 122 79999987754 689999999999999975432 2233332 3334444333 3557899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|++++.+
T Consensus 247 i~v~Dva~ai~~~ 259 (378)
T PLN00016 247 GHVKDLASMFALV 259 (378)
T ss_pred ecHHHHHHHHHHH
Confidence 9999999998765
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-25 Score=174.93 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=149.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|+++|++|+++.|+..........+. .+.++.++++|++|++++.++++
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~ 76 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 65667899999999999999999999999999999994332222222111 23468999999999999888775
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+++.... ...+.+...+++|+.++.++.+.+. +.+ .++|+++||.+...+.+
T Consensus 77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~------- 148 (252)
T PRK06138 77 ARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGR------- 148 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC-------
Confidence 57999999997542 2234455678999999987776653 455 67999999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcH-HHHHHHHhcCccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSV-RGTLAMVMGNREE 220 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+++.++++. |++++++|||.++++.......... .............
T Consensus 149 ---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (252)
T PRK06138 149 ---------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHP 213 (252)
T ss_pred ---------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCC
Confidence 22459999999999999998765 8999999999999985332211100 0001111111111
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+++++|+++++++++
T Consensus 214 ~~-----~~~~~~d~a~~~~~l~ 231 (252)
T PRK06138 214 MN-----RFGTAEEVAQAALFLA 231 (252)
T ss_pred CC-----CCcCHHHHHHHHHHHc
Confidence 21 5889999999988763
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=174.65 Aligned_cols=204 Identities=20% Similarity=0.177 Sum_probs=147.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|++|++++++|+++|++|++++|+..........+.. .+..+.++.+|+.|.+++.++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA---AGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 457999999999999999999999999999999943322222222221 23458899999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceee-ecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTV-HFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~-~~~~~~~~~~~e~ 146 (243)
++|+|||+++.... ...+++...++.|+.++.++++.+. +.+ .++||++||...+ .+.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~---------- 150 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGY---------- 150 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCC----------
Confidence 57999999987543 2234556789999999999998874 345 6789999997543 111
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+....|+.+|.+++.+++.++++ .|++++++||+.++|+.......... .... ....++.
T Consensus 151 ------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~~-~~~~~~~- 213 (251)
T PRK12826 151 ------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW---AEAI-AAAIPLG- 213 (251)
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH---HHHH-HhcCCCC-
Confidence 12346999999999999998765 48999999999999986443322111 1111 1112222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|+++.++
T Consensus 214 ----~~~~~~dva~~~~~l 228 (251)
T PRK12826 214 ----RLGEPEDIAAAVLFL 228 (251)
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 689999999998765
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=176.96 Aligned_cols=210 Identities=18% Similarity=0.094 Sum_probs=145.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| ++.....+ ... ...++..+.+|++|.+++.++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~l---~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR-SEAARADF---EAL--HPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC-CHHHHHHH---Hhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999 54332221 111 13468899999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+ .+++|++||.+...+.+
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~---------- 145 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP---------- 145 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC----------
Confidence 37999999997543 12234567799999999999998543 34 57899999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC---CcHHHHHHHHhcCcccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA---GSVRGTLAMVMGNREEY 221 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.|.+++.++.+ +|++++++|||.+.++....... .................
T Consensus 146 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (277)
T PRK06180 146 ------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR 213 (277)
T ss_pred ------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH
Confidence 2346999999999999988765 49999999999998874322111 11111111000000000
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.......+..++|+|++++.+
T Consensus 214 ~~~~~~~~~~~~dva~~~~~~ 234 (277)
T PRK06180 214 EAKSGKQPGDPAKAAQAILAA 234 (277)
T ss_pred HhhccCCCCCHHHHHHHHHHH
Confidence 001122567899999998765
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=176.05 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=145.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| ++..... ...+.. .+.+++++.+|+.|.+++.++++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADL-NDEAAAAAAEALQK---AGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999 4433222 122221 24578899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|+|||+|+.... .+.+.+...+++|+.++.++.+. +++.+ .++||++||...+.+.+
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~--------- 148 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA--------- 148 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC---------
Confidence 47999999986443 22344556788899986665554 44456 78999999976553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-------HHHHHHHHhc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-------VRGTLAMVMG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-------~~~~~~~~~~ 216 (243)
..+.|+.+|.+.+.+.+.++++ .+++++.+|||.++++......... .........+
T Consensus 149 -------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T PRK12429 149 -------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL 215 (258)
T ss_pred -------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh
Confidence 2345999999999999988765 4899999999999998643221110 0000000000
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. ....+++++++|+|+++++++
T Consensus 216 ~-----~~~~~~~~~~~d~a~~~~~l~ 237 (258)
T PRK12429 216 P-----LVPQKRFTTVEEIADYALFLA 237 (258)
T ss_pred c-----cCCccccCCHHHHHHHHHHHc
Confidence 0 122347999999999987763
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=174.60 Aligned_cols=206 Identities=17% Similarity=0.184 Sum_probs=148.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++++|+.|.+++.+++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG---QGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999943322222222221 234588999999999999888763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||.....+.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~----------- 153 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALAR----------- 153 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCC-----------
Confidence 7999999987543 223445678889999999999988754 4 5789999996533221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|.+.+.+++.++.+ +|++++++|||.+.++........ ....... ....+..
T Consensus 154 -----------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~-~~~~~~~-- 217 (255)
T PRK07523 154 -----------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWL-EKRTPAG-- 217 (255)
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHH-HhcCCCC--
Confidence 12245999999999999998864 589999999999999864322111 1111111 1122222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+|+++++++
T Consensus 218 ---~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 218 ---RWGKVEELVGACVFLA 233 (255)
T ss_pred ---CCcCHHHHHHHHHHHc
Confidence 6889999999988763
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=175.24 Aligned_cols=208 Identities=17% Similarity=0.172 Sum_probs=145.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||+++++.|+++|++|++++| +........ ......+.+++++.+|++|.+++.++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGAR-RVEKCEELV--DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999998 433221111 1111123468889999999999988876
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...++.|+.++.++++.+.+ .+ .++||++||...+.+.+
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~----------- 154 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRP----------- 154 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC-----------
Confidence 46999999987543 12234556789999999999888654 33 46899999976543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+...|+.+|.+.|.+++.++++. |++++++|||.+.++............+..... .+....
T Consensus 155 -----------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~----~~~~~~ 219 (274)
T PRK07775 155 -----------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWA----KWGQAR 219 (274)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHH----Hhcccc
Confidence 22459999999999999988664 899999999988766322211111111111111 011112
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+.++|++|+|++++++
T Consensus 220 ~~~~~~~~dva~a~~~~ 236 (274)
T PRK07775 220 HDYFLRASDLARAITFV 236 (274)
T ss_pred cccccCHHHHHHHHHHH
Confidence 34799999999999875
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=175.99 Aligned_cols=208 Identities=18% Similarity=0.176 Sum_probs=148.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+.|+++||||+|+||+++++.|+++|++|+++.| +........ ... ...+.++.+|++|.+++.++++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADI-KPARARLAA--LEI---GPAAIAVSLDVTRQDSIDRIVAAAVER 77 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHH--HHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999 443322221 111 2368899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG----TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+|+.... ...+++...+++|+.++.++++++.+.. .-.+||++||.....+.
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 147 (257)
T PRK07067 78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE---------- 147 (257)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC----------
Confidence 47999999986532 1234566789999999999999886542 12589999996533221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc------HHHHHHHHhcC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS------VRGTLAMVMGN 217 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~------~~~~~~~~~~~ 217 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++......... .........+.
T Consensus 148 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
T PRK07067 148 ------------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE 215 (257)
T ss_pred ------------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh
Confidence 13356999999999999988875 5899999999999998543211000 00000111112
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+ .+++++++|+|+++++++
T Consensus 216 ~~~-----~~~~~~~~dva~~~~~l~ 236 (257)
T PRK07067 216 AVP-----LGRMGVPDDLTGMALFLA 236 (257)
T ss_pred cCC-----CCCccCHHHHHHHHHHHh
Confidence 222 348999999999988764
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=173.05 Aligned_cols=209 Identities=18% Similarity=0.153 Sum_probs=149.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|....++++||||+|+||+++++.|+++|++|++++| ++..... ...+.. +.++.++++|+.|++++.++++
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR-NEEAAERVAAEILA----GGRAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 5566789999999999999999999999999999999 4432222 122111 3468899999999999988876
Q ss_pred -----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccc
Q 026091 78 -----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|+|||+|+.... .+.+.+...+++|+.++.++++.+.+ .+ .++||++||.+.+.+.+
T Consensus 76 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----- 149 (251)
T PRK07231 76 LERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRP----- 149 (251)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCC-----
Confidence 46999999986432 23345667899999998888776664 44 67899999976553321
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
+...|+.+|.+.+.+++.++++. +++++.++||.+.++..........+........ ..
T Consensus 150 -----------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~ 211 (251)
T PRK07231 150 -----------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA-TI 211 (251)
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc-CC
Confidence 23459999999999999887653 8999999999998775332211101111111111 11
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. ..+++++|+|+++++++
T Consensus 212 ~~-----~~~~~~~dva~~~~~l~ 230 (251)
T PRK07231 212 PL-----GRLGTPEDIANAALFLA 230 (251)
T ss_pred CC-----CCCcCHHHHHHHHHHHh
Confidence 12 26889999999988763
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=171.57 Aligned_cols=207 Identities=19% Similarity=0.198 Sum_probs=147.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|+.++|+|+||||+|++|+++++.|+++|++|++++|+..........+. ..+.++.++.+|+.|++++.+++++
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR---AAGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH---hcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 55556899999999999999999999999999999994332211122121 1245688999999999988887764
Q ss_pred -----ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 79 -----CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 -----~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||++|.... ...+.+...++.|+.++.++++.+. +.+ .++||++||.....+.
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~-------- 148 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGN-------- 148 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCC--------
Confidence 5999999986433 2223455778999999999988875 345 6899999997543221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++++ .+++++++||+.++++..... .....+... .....
T Consensus 149 --------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~~~-~~~~~ 209 (246)
T PRK05653 149 --------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL----PEEVKAEIL-KEIPL 209 (246)
T ss_pred --------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----hHHHHHHHH-hcCCC
Confidence 12245999999999999988765 489999999999999864321 111111111 11112
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+++++.+++
T Consensus 210 -----~~~~~~~dva~~~~~~~ 226 (246)
T PRK05653 210 -----GRLGQPEEVANAVAFLA 226 (246)
T ss_pred -----CCCcCHHHHHHHHHHHc
Confidence 36889999999987753
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=175.52 Aligned_cols=209 Identities=17% Similarity=0.113 Sum_probs=143.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|++|+++++.|+++|++|++++| +++..............+.+++++.+|++|++++.+ ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMR-NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 578999999999999999999999999999999 443322222111111113478999999999988776 43
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
.+|+|||+||.... ...+.+...+++|+.++.++++.+ ++.+ .++||++||.+.+.+.+
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~----------- 148 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFP----------- 148 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCC-----------
Confidence 46999999986543 122345567889999999888875 4455 67999999975443321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHH---HcCccEEEEccCceeCCCCCCCCC---------CcHHHHHHHHhc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAE---EHGLDLVTIIPSFVTGPFICPQLA---------GSVRGTLAMVMG 216 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~gi~~~~~rp~~i~G~~~~~~~~---------~~~~~~~~~~~~ 216 (243)
+...|+.+|.+.+.+++.++. .+|++++++|||.+.++....... ............
T Consensus 149 -----------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (280)
T PRK06914 149 -----------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK 217 (280)
T ss_pred -----------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH
Confidence 234599999999999998873 459999999999999984332110 000111111100
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. ......+++++|+|++++++
T Consensus 218 ~~----~~~~~~~~~~~dva~~~~~~ 239 (280)
T PRK06914 218 HI----NSGSDTFGNPIDVANLIVEI 239 (280)
T ss_pred HH----hhhhhccCCHHHHHHHHHHH
Confidence 00 01123679999999998875
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=172.56 Aligned_cols=208 Identities=21% Similarity=0.249 Sum_probs=143.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|++|||||+|+||+++++.|+++|++|++++| +......+..... ....+++++.+|+.|.+++.++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL-GEAGAEAAAKVAT--DAGGSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999999 4433222221111 113468899999999997766554
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+|+.... ...+.+...++.|+.++..+++.+ ++.+ .+++|++||.+.+.+.+
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~----------- 145 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASP----------- 145 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCC-----------
Confidence 47999999986543 122334567888999988888876 4455 78999999976543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-------HHHHHHHHhcCc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-------VRGTLAMVMGNR 218 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-------~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+++.++.+ .+++++.+||+.++++......... .........
T Consensus 146 -----------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 211 (255)
T TIGR01963 146 -----------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVM--- 211 (255)
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHH---
Confidence 1235999999999999888765 4899999999999998422110000 000000000
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
......++++|++|+|+++++++
T Consensus 212 --~~~~~~~~~~~~~d~a~~~~~~~ 234 (255)
T TIGR01963 212 --LPGQPTKRFVTVDEVAETALFLA 234 (255)
T ss_pred --HccCccccCcCHHHHHHHHHHHc
Confidence 01123458999999999988753
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-24 Score=170.04 Aligned_cols=205 Identities=20% Similarity=0.132 Sum_probs=142.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+ .........+. ..+.++.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~-~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELR---AAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc-hHHHHHHHHHH---hcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999994 32221222221 123467889999999988877765
Q ss_pred -cccEEEEeeeccC---C---CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPID---I---HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||... . ...+.+...+++|+.++..+++.+. +.+ .++||++||...+. .
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~-~---------- 150 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG-I---------- 150 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC-C----------
Confidence 4799999998431 1 2345566778899988876655444 445 57899999976431 1
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCC--------C-CCCcHHHHHHHH
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICP--------Q-LAGSVRGTLAMV 214 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~--------~-~~~~~~~~~~~~ 214 (243)
+..+|+.+|.+.+.+.+.++.+. |+++++++||++++|.... . .......+....
T Consensus 151 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (260)
T PRK12823 151 -------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQT 217 (260)
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHH
Confidence 11349999999999999998775 8999999999999974110 0 011112222222
Q ss_pred hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ..++. .+.+++|+|+++++++
T Consensus 218 ~~-~~~~~-----~~~~~~dva~~~~~l~ 240 (260)
T PRK12823 218 LD-SSLMK-----RYGTIDEQVAAILFLA 240 (260)
T ss_pred hc-cCCcc-----cCCCHHHHHHHHHHHc
Confidence 11 11222 5678999999998763
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-24 Score=170.43 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=143.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.++|+||||+|+||++++++|+++|++|++++|+......... .+... ....+.++.+|++|.+++..+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL--RPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh--cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999995443222211 11111 12358899999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+.- +-..++++++.... .+
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~----------- 149 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE--RP----------- 149 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc--CC-----------
Confidence 36999999986432 1223456789999999999999987531 12356665553211 10
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
.++.+.|+.+|.++|.+++.++++. +++++++||+.++||......... ......... .+.
T Consensus 150 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~-~~~---- 212 (249)
T PRK09135 150 ---------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEE---ARQAILART-PLK---- 212 (249)
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHH---HHHHHHhcC-CcC----
Confidence 1244679999999999999998775 699999999999999754322211 111111111 122
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++.++
T Consensus 213 -~~~~~~d~a~~~~~~ 227 (249)
T PRK09135 213 -RIGTPEDIAEAVRFL 227 (249)
T ss_pred -CCcCHHHHHHHHHHH
Confidence 345689999998554
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=171.35 Aligned_cols=204 Identities=20% Similarity=0.209 Sum_probs=146.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||+++++.|+++|++|++++|+..... .....+. ....++.++++|++|++++.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELR---ALGVEVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999999998543221 1111111 123478999999999988887765
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc----C--C---ccEEEEEecceeeecCCCCc
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS----G--T---VKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~---~~~~i~~Ss~~~~~~~~~~~ 140 (243)
.+|+|||+||.... .+.+.+...++.|+.++.++++++.+. . . .++|+++||...+.+.+
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 155 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP--- 155 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC---
Confidence 47999999986432 223556678999999999998887553 1 1 46799999976543331
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
+...|+.+|.+.|.+++.++++ +|+++++++||.+.++....... .........
T Consensus 156 -------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~~~ 212 (256)
T PRK12745 156 -------------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA----KYDALIAKG 212 (256)
T ss_pred -------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch----hHHhhhhhc
Confidence 2245999999999999999865 68999999999999875432211 111111111
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.. .+.+++|+++++.++
T Consensus 213 ~~~~~-----~~~~~~d~a~~i~~l 232 (256)
T PRK12745 213 LVPMP-----RWGEPEDVARAVAAL 232 (256)
T ss_pred CCCcC-----CCcCHHHHHHHHHHH
Confidence 11222 688999999988765
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=172.62 Aligned_cols=212 Identities=18% Similarity=0.205 Sum_probs=149.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..+.|+++||||+|+||++++++|+++|++|++++| ++.....+. .+....+.+++++.+|++|.+++..+++
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR-TAERLDEVA--AEIDDLGRRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH--HHHHHhCCceEEEecCCCCHHHHHHHHHHHH
Confidence 4445789999999999999999999999999999999 443222221 1111123468999999999998887775
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccC
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... .+.+.+...++.|+.++..+++++.+.. ..++||++||.....+.+
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------- 149 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-------- 149 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC--------
Confidence 47999999986432 2235566789999999999999987642 125899999976432221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC-------cHHHHHHHHh
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG-------SVRGTLAMVM 215 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~-------~~~~~~~~~~ 215 (243)
+...|+.+|.+.+.+++.++.+ +++++++++||.++++........ ..........
T Consensus 150 --------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T PRK07890 150 --------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETA 215 (258)
T ss_pred --------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHh
Confidence 2245999999999999998865 489999999999999853221100 0111111111
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .... ..+.+++|+++++++++
T Consensus 216 ~-~~~~-----~~~~~~~dva~a~~~l~ 237 (258)
T PRK07890 216 A-NSDL-----KRLPTDDEVASAVLFLA 237 (258)
T ss_pred h-cCCc-----cccCCHHHHHHHHHHHc
Confidence 1 1111 25789999999987763
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=194.26 Aligned_cols=168 Identities=25% Similarity=0.337 Sum_probs=130.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|+|||||||||++++++|+++|++|++++|+.... . ..+++++.+|++|.+.+.++++++|+|||+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~---------~~~v~~v~gDL~D~~~l~~al~~vD~VVHl 68 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W---------PSSADFIAADIRDATAVESAMTGADVVAHC 68 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c---------ccCceEEEeeCCCHHHHHHHHhCCCEEEEC
Confidence 3799999999999999999999999999999943211 0 126789999999999999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+.... .+++|+.++.+++++|++.+ +++||++||.+
T Consensus 69 Aa~~~~--------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~---------------------------------- 105 (854)
T PRK05865 69 AWVRGR--------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH---------------------------------- 105 (854)
T ss_pred CCcccc--------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------------
Confidence 975321 46889999999999999998 89999999831
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc--ccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM--LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~ 242 (243)
|.++|++++ +++++++++||+++|||+.. .++. . .........+ ...++|+|++|+|++++.+
T Consensus 106 --K~aaE~ll~----~~gl~~vILRp~~VYGP~~~----~~i~---~-ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~a 170 (854)
T PRK05865 106 --QPRVEQMLA----DCGLEWVAVRCALIFGRNVD----NWVQ---R-LFALPVLPAGYADRVVQVVHSDDAQRLLVRA 170 (854)
T ss_pred --HHHHHHHHH----HcCCCEEEEEeceEeCCChH----HHHH---H-HhcCceeccCCCCceEeeeeHHHHHHHHHHH
Confidence 666787664 36999999999999999521 1111 1 1111111111 3356899999999998754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-24 Score=169.82 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=145.5
Q ss_pred CCC-CCCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 1 MEE-EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 1 m~~-~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
|+. +.++|+||||+|+||++++++|+++|++|.++ .| +.... .....+. ..+.+++++.+|++|.+++.++++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r-~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~i~~~~~ 76 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGR-NKQAADETIREIE---SNGGKAFLIEADLNSIDGVKKLVE 76 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHH---hcCCcEEEEEcCcCCHHHHHHHHH
Confidence 443 34899999999999999999999999999876 45 43222 1111111 123468899999999999888776
Q ss_pred -------------cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCC
Q 026091 78 -------------GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 78 -------------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~ 138 (243)
++|+|||+||..... ..+.+...+++|+.++.++++.+.+.- ..+++|++||..++.+.+
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~- 155 (254)
T PRK12746 77 QLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT- 155 (254)
T ss_pred HHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC-
Confidence 479999999875431 223345677899999999999988742 135899999976543221
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM 215 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~ 215 (243)
+...|+.+|.+.+.+.+.++.+ +++++++++||.+.++........ ..+....
T Consensus 156 ---------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~- 211 (254)
T PRK12746 156 ---------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD--PEIRNFA- 211 (254)
T ss_pred ---------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC--hhHHHHH-
Confidence 2245999999999999888765 589999999999998853322111 0011111
Q ss_pred cCccccccccCcCceeHHHHHHhhhcc
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.....+. .+.+++|+|+++.++
T Consensus 212 ~~~~~~~-----~~~~~~dva~~~~~l 233 (254)
T PRK12746 212 TNSSVFG-----RIGQVEDIADAVAFL 233 (254)
T ss_pred HhcCCcC-----CCCCHHHHHHHHHHH
Confidence 1111222 678999999998765
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-24 Score=205.91 Aligned_cols=229 Identities=24% Similarity=0.253 Sum_probs=157.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC----CeEEEEEeCCchhhchhhhhhcC--------CCCCCCeEEEecCCCC----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG----YSVRTTVRSDPEQKRDLSFLTNL--------PRASERLQIFNADLNN---- 68 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~d---- 68 (243)
.++|+|||||||+|+++++.|++++ ++|+++.|.. ........+... .....+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~-~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAK-SEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcC-ChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 4789999999999999999999887 8999999943 222222222110 1112478999999974
Q ss_pred --hhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC--------
Q 026091 69 --PESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK-------- 138 (243)
Q Consensus 69 --~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~-------- 138 (243)
.+.+.++.+++|+|||+|+..+.. .+.......|+.++.+++++|++.+ +++|+|+||.+++.....
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~--~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWV--YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCc--cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhh
Confidence 456777788899999999987643 4454566789999999999999887 889999999988743210
Q ss_pred --CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHHHH
Q 026091 139 --DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMV 214 (243)
Q Consensus 139 --~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~ 214 (243)
....+.|..+... ....+.+.|+.+|.++|.++..+.+ .|++++++||+.|||+...... ..++..+.+..
T Consensus 1127 ~~~~~~~~e~~~~~~----~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443 1127 QAGGAGIPESDDLMG----SSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred hccCCCCCccccccc----ccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence 0112233322111 1112346799999999999998764 5999999999999998654432 22233333222
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..........+.++|++++|+|++++.+
T Consensus 1202 ~~~~~~p~~~~~~~~~~Vddva~ai~~~ 1229 (1389)
T TIGR03443 1202 IQLGLIPNINNTVNMVPVDHVARVVVAA 1229 (1389)
T ss_pred HHhCCcCCCCCccccccHHHHHHHHHHH
Confidence 1111111224568999999999998754
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=169.12 Aligned_cols=203 Identities=20% Similarity=0.159 Sum_probs=143.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------ 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------ 78 (243)
+|+++||||+|+||++++++|+++|++|++++| ++....... ... .+.+++++++|+.|.+++.+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r-~~~~~~~~~--~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI-DAAALAAFA--DAL--GDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999 443221111 111 134688999999999998887763
Q ss_pred -ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 -CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 -~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|+|||++|.... ...+.+...++.|+.++.++++++.+ .+ .++|+++||....... +
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--~--------- 144 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL--G--------- 144 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC--C---------
Confidence 7999999986432 12233455677899999999888743 34 5789999996432111 0
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
...|+.+|.+.+.+++.++++. |++++.++||.++++........... +...... .. .
T Consensus 145 ------------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~-~~-----~ 205 (257)
T PRK07074 145 ------------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQ-VFEELKK-WY-----P 205 (257)
T ss_pred ------------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChH-HHHHHHh-cC-----C
Confidence 0239999999999999998764 79999999999999854322111111 1111111 11 1
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
..++++++|+++++++++
T Consensus 206 ~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 206 LQDFATPDDVANAVLFLA 223 (257)
T ss_pred CCCCCCHHHHHHHHHHHc
Confidence 238999999999998764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=167.67 Aligned_cols=204 Identities=18% Similarity=0.175 Sum_probs=146.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT-NLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||+++++.|+++|++|+++.|...+.......+. .....+..++++.+|+.|.++++++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999998763322222222221 111224578899999999999888874
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL-----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|.|||+||.... ...+.+...+++|+.++.++++++. +.+ .+++|++||...+.+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------- 155 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNR-------- 155 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCC--------
Confidence 47999999997542 2233456788999999999999987 344 67999999976554321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+++.++++ .+++++++|||.+.++....... .... .... ...
T Consensus 156 --------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~--~~~~---~~~~--~~~ 214 (249)
T PRK12827 156 --------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP--TEHL---LNPV--PVQ 214 (249)
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch--HHHH---HhhC--CCc
Confidence 2245999999999999988765 48999999999999986433211 1111 1111 111
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+.+|++++++++
T Consensus 215 -----~~~~~~~va~~~~~l 229 (249)
T PRK12827 215 -----RLGEPDEVAALVAFL 229 (249)
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 456889999988765
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=159.36 Aligned_cols=200 Identities=17% Similarity=0.159 Sum_probs=147.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|.++|||||++||.+++++|++.|++|++..| +.+. ++.+.. .. ...+..+..|++|.+++.++++
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR-R~dr---L~~la~~~~--~~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAAR-REER---LEALADEIG--AGAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec-cHHH---HHHHHHhhc--cCceEEEeeccCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999 5432 233322 11 1468899999999988666654
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++|||||.... ...++|..++++|+.|..+..++... .+ ..+||.+||.++.+.++
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~--------- 148 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYP--------- 148 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCC---------
Confidence 58999999997543 45678889999999999998887654 34 46999999988665553
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC-cHHHHHHHHhcCccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG-SVRGTLAMVMGNREEYS 222 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~ 222 (243)
..+.|+.+|.+...+...+.++ ++++++.+-||.+-+......... --....+...
T Consensus 149 -------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~------- 208 (246)
T COG4221 149 -------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK------- 208 (246)
T ss_pred -------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc-------
Confidence 2356999999998888887766 489999999999966422211111 0111111111
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
...++..+|+|+++.++
T Consensus 209 ---~~~~l~p~dIA~~V~~~ 225 (246)
T COG4221 209 ---GGTALTPEDIAEAVLFA 225 (246)
T ss_pred ---cCCCCCHHHHHHHHHHH
Confidence 12689999999999875
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=167.64 Aligned_cols=205 Identities=17% Similarity=0.182 Sum_probs=146.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
+.|+++||||+|+||++++++|+++|++|+++.++.+...... .......+.++.++.+|++|++++.+++++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL--VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH--HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999987766343322221 111112234689999999999999888875
Q ss_pred --ccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+|+..... ..+.+.+.+++|+.++.++++++.+. + .+++|++||...+.+.+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------- 151 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGF---------- 151 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCC----------
Confidence 69999999875431 22456678999999999999988753 3 46899999965443221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+++.++.+. ++++++++||.+.++...... .......... .
T Consensus 152 ------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~------~ 209 (247)
T PRK12935 152 ------------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP----EEVRQKIVAK------I 209 (247)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc----HHHHHHHHHh------C
Confidence 22459999999999998887664 899999999999876432211 1111111111 1
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
..+.+++++|+++++++++
T Consensus 210 ~~~~~~~~edva~~~~~~~ 228 (247)
T PRK12935 210 PKKRFGQADEIAKGVVYLC 228 (247)
T ss_pred CCCCCcCHHHHHHHHHHHc
Confidence 1237899999999998763
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=168.94 Aligned_cols=209 Identities=19% Similarity=0.210 Sum_probs=146.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||+++++.|+++|++|++++|+..........+.... ...++.++.+|+.|++++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK-GAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc-CCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999994332222222222111 12468899999999998888876
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.. ..++|+++||...+...
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 153 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----------- 153 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------
Confidence 57999999985421 2223456788899999999988766542 13589999997653221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++.+.|+.+|.+.|.+++.++++. +++++++|||.+.++........ ........ ...+..
T Consensus 154 -----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~-~~~~~~-- 217 (276)
T PRK05875 154 -----------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES--PELSADYR-ACTPLP-- 217 (276)
T ss_pred -----------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC--HHHHHHHH-cCCCCC--
Confidence 123569999999999999988764 69999999999988754322111 11111111 111122
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+++++|+|+++.+++
T Consensus 218 ---~~~~~~dva~~~~~l~ 233 (276)
T PRK05875 218 ---RVGEVEDVANLAMFLL 233 (276)
T ss_pred ---CCcCHHHHHHHHHHHc
Confidence 6788999999988764
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=170.04 Aligned_cols=204 Identities=16% Similarity=0.131 Sum_probs=144.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+|+||||+|+||++++++|+++|++|++++| +.+...... .. ....+.++++|++|.+++.++++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~---~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR-DTATLADLA---EK--YGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---Hh--ccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999999 543322211 11 13468889999999998887765
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...++.|+.++.++++.+ ++.+ .+++|++||.+.+.+.+
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~----------- 144 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFP----------- 144 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCC-----------
Confidence 46999999997543 223456788999999998887775 4455 67999999976553321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC--CcHHHHHHH--HhcCcccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAM--VMGNREEY 221 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~--~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|++++++|||.+.++....... ......... .....
T Consensus 145 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--- 210 (275)
T PRK08263 145 -----------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ--- 210 (275)
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---
Confidence 1245999999999999988765 69999999999998875432110 111111110 00000
Q ss_pred ccccCcCc-eeHHHHHHhhhcc
Q 026091 222 SMLLNISM-VHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~-i~v~Dva~a~~~~ 242 (243)
.....+ ++++|+|++++++
T Consensus 211 --~~~~~~~~~p~dva~~~~~l 230 (275)
T PRK08263 211 --WSERSVDGDPEAAAEALLKL 230 (275)
T ss_pred --HHhccCCCCHHHHHHHHHHH
Confidence 111245 8899999998875
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=168.02 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=145.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
+.|++|||||+|+||++++++|+++|++|++++|+ . . . ..+.+++++++|++|.+++.+++++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~-~-----~---~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA-F-----L---T---QEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc-h-----h---h---hcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999994 3 0 0 1134688999999999999988764
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+++.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.....+.
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~----------- 142 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPR----------- 142 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCC-----------
Confidence 7999999987543 12345667899999999999988754 33 4689999996543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC-cH-HH----HHHHHhcCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG-SV-RG----TLAMVMGNR 218 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~-~~-~~----~~~~~~~~~ 218 (243)
++...|+.+|.+.+.+++.++.+ +|+++++++||.++++........ .. .. ..... ...
T Consensus 143 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 210 (252)
T PRK08220 143 -----------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF-KLG 210 (252)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH-hhc
Confidence 12245999999999999998876 699999999999999853221100 00 00 00111 111
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.++ ..+++++|+|+++++++
T Consensus 211 ~~~-----~~~~~~~dva~~~~~l~ 230 (252)
T PRK08220 211 IPL-----GKIARPQEIANAVLFLA 230 (252)
T ss_pred CCC-----cccCCHHHHHHHHHHHh
Confidence 122 27899999999998763
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=170.59 Aligned_cols=207 Identities=12% Similarity=0.124 Sum_probs=148.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|++|||||+|+||++++++|++.|++|++..|+... ... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA---EGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH---cCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999887763221 111 1111111 24467899999999988888775
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.- .-.+||++||..++...+
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 200 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP---------- 200 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence 47999999986421 2345677899999999999999988642 125899999987653321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+++.++++ +|+++++++||.+.++...... .. ......+ +...++.
T Consensus 201 ------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~-~~-~~~~~~~-~~~~p~~-- 263 (300)
T PRK06128 201 ------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG-QP-PEKIPDF-GSETPMK-- 263 (300)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC-CC-HHHHHHH-hcCCCCC--
Confidence 1234999999999999999876 4899999999999998643211 11 1111111 1222222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+.+|+|.++++++
T Consensus 264 ---r~~~p~dva~~~~~l~ 279 (300)
T PRK06128 264 ---RPGQPVEMAPLYVLLA 279 (300)
T ss_pred ---CCcCHHHHHHHHHHHh
Confidence 6789999999988763
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=167.25 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=146.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|+.+.|+|+||||+|+||+++++.|+++|++|+++.+++......+. ... ..++.++++|+.|.+++.+++++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA--DEL---GDRAIALQADVTDREQVQAMFATAT 75 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--HHh---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 66667899999999999999999999999999887664443222211 111 24788999999999988888763
Q ss_pred ------ccEEEEeeeccCC-----------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCC
Q 026091 79 ------CTGVIHVAAPIDI-----------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 79 ------~d~vi~~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~ 137 (243)
+|++||+|+.... ...+++...+++|+.++.++++++.+ .+ ..+++++||.......
T Consensus 76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~- 153 (253)
T PRK08642 76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPV- 153 (253)
T ss_pred HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCC-
Confidence 8999999975210 12244567899999999999998864 33 5689999985421110
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
.+...|+.+|.+.+.+++.++.+ +|++++.++||.+..+....... .......
T Consensus 154 ---------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~~~ 209 (253)
T PRK08642 154 ---------------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---DEVFDLI 209 (253)
T ss_pred ---------------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---HHHHHHH
Confidence 12345999999999999999877 47999999999998764222111 1111111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. ...++. .+.+.+|+|+++.+++
T Consensus 210 ~-~~~~~~-----~~~~~~~va~~~~~l~ 232 (253)
T PRK08642 210 A-ATTPLR-----KVTTPQEFADAVLFFA 232 (253)
T ss_pred H-hcCCcC-----CCCCHHHHHHHHHHHc
Confidence 1 222233 6899999999988764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-24 Score=171.41 Aligned_cols=211 Identities=18% Similarity=0.144 Sum_probs=144.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+++||||+|+||++++++|+++|++|++++|+.+........+. ..+.++.++.+|++|.+++.+++++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR---AEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999984332221222221 1234688899999999999888763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+||.... .+.+.+...+++|+.++.++++.+.. .+..++||++||..++.+.
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~----------- 150 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN----------- 150 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------
Confidence 6999999996432 23345667889999999999888753 3323689999997654322
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc-cccc-
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR-EEYS- 222 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~- 222 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .. ........ ..+.
T Consensus 151 -----------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~-~~~~~~~~~~~~~~ 216 (275)
T PRK05876 151 -----------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERI--RG-AACAQSSTTGSPGP 216 (275)
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhh--cC-cccccccccccccc
Confidence 13356999999877766666544 489999999999988753221000 00 00000000 0111
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+++++++|+|++++.+
T Consensus 217 ~~~~~~~~~~~dva~~~~~a 236 (275)
T PRK05876 217 LPLQDDNLGVDDIAQLTADA 236 (275)
T ss_pred ccccccCCCHHHHHHHHHHH
Confidence 12345789999999998753
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=166.65 Aligned_cols=201 Identities=18% Similarity=0.160 Sum_probs=145.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +....... ..+.. ...++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADI-NAEGAERVAKQIVA---DGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999 44322221 11111 12367889999999998887765
Q ss_pred --cccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|+|||+||.... ...+.+...+++|+.++.++++++.+.. +.+++|++||.+++..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 151 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY--------- 151 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---------
Confidence 47999999997431 1224455678899999999999887641 1469999999765421
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
.+.|+.+|.+.|.+++.+++++ +++++.++||.+.++......+. ........+.+ .
T Consensus 152 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~~--~ 211 (250)
T PRK07774 152 ----------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPK--EFVADMVKGIP--L 211 (250)
T ss_pred ----------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCH--HHHHHHHhcCC--C
Confidence 2349999999999999998774 79999999999988764432211 11111222221 2
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|++++++
T Consensus 212 ~-----~~~~~~d~a~~~~~~ 227 (250)
T PRK07774 212 S-----RMGTPEDLVGMCLFL 227 (250)
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 467889999998765
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=166.46 Aligned_cols=204 Identities=16% Similarity=0.139 Sum_probs=143.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+++++||||+|+||++++++|+++|++|+++ .| +.... +....+.. .+.++.++.+|++|++++.++++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR-SRKAAEETAEEIEA---LGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999998774 56 43222 11122221 23468899999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|+|||+||.... ...+.+...+++|+.++.++++++.+.. ..++||++||.....+.+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 149 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE---------- 149 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC----------
Confidence 37999999986432 1223344578899999999988887642 146999999965432211
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.|.+++.++.+ .|+++++++||.+.++........ .......... ..+.
T Consensus 150 ------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~~-- 212 (250)
T PRK08063 150 ------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR--EELLEDARAK-TPAG-- 212 (250)
T ss_pred ------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc--hHHHHHHhcC-CCCC--
Confidence 2245999999999999998765 589999999999988753321111 1111111111 1122
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 213 ---~~~~~~dva~~~~~~ 227 (250)
T PRK08063 213 ---RMVEPEDVANAVLFL 227 (250)
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 579999999998765
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-23 Score=165.68 Aligned_cols=207 Identities=20% Similarity=0.219 Sum_probs=146.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +......+ ..+.. .+.+++++.+|++|.++++++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL-NREAAEKVAADIRA---KGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 44332222 11221 13468999999999998888875
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+++.... .+.+.+...+++|+.++.++++++. +.+ .+++|++||.+++.+.+
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~--------- 147 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSS--------- 147 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCC---------
Confidence 47999999986432 2223445679999999999888765 345 67999999987654332
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC--cHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG--SVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+. ++++++++||.++++........ .-..+....... ...
T Consensus 148 -------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (250)
T TIGR03206 148 -------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA-IPL 213 (250)
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhc-CCc
Confidence 12359999999999999988764 89999999999998843221100 001111111111 112
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++.+++
T Consensus 214 ~-----~~~~~~dva~~~~~l~ 230 (250)
T TIGR03206 214 G-----RLGQPDDLPGAILFFS 230 (250)
T ss_pred c-----CCcCHHHHHHHHHHHc
Confidence 2 4677899999988753
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=170.43 Aligned_cols=163 Identities=19% Similarity=0.243 Sum_probs=129.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++++|+||||+|+||++++++|+++|++|++++| ++..... ..+++++++|++|.+++.+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 71 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSR-NPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARA 71 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-Chhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999 4422211 23678999999999999988874
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+||.... ...+++...+++|+.++.++++.+ ++.+ .++||++||...+...+
T Consensus 72 g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 140 (270)
T PRK06179 72 GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP---------- 140 (270)
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC----------
Confidence 6999999997543 123445688999999999988874 4556 78999999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~ 200 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...
T Consensus 141 ------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~ 184 (270)
T PRK06179 141 ------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA 184 (270)
T ss_pred ------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence 2346999999999999888655 5999999999999987543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=165.60 Aligned_cols=193 Identities=20% Similarity=0.241 Sum_probs=141.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||+++++.|+++|++|++++|+.....+....+. ....+.+.+|+.|.+++.++++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP-----ADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHh-----hcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999994432222222222 1256788899999998888776
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+++.... ...+.+.+.++.|+.++.++++++.+ .+ .+++|++||...+.+.+
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------- 149 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGP---------- 149 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCC----------
Confidence 47999999986432 12233456788999999999887753 44 78999999987543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+++.++++ ++++++.+|||.++++....... . .
T Consensus 150 ------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~------------~------~ 199 (239)
T PRK12828 150 ------------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP------------D------A 199 (239)
T ss_pred ------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC------------c------h
Confidence 2245999999999999887765 48999999999999983211100 0 0
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....+++++|+|+++.++
T Consensus 200 ~~~~~~~~~dva~~~~~~ 217 (239)
T PRK12828 200 DFSRWVTPEQIAAVIAFL 217 (239)
T ss_pred hhhcCCCHHHHHHHHHHH
Confidence 111478999999998765
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=168.01 Aligned_cols=211 Identities=19% Similarity=0.177 Sum_probs=144.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++|+........ ..+.. .+.++.++++|++|++++.++++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA---AGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999998433222111 11111 13467899999999999888775
Q ss_pred --cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 78 --GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
++|+|||+|+.......+ +...+++|+.++.++++.+.+.. ..+++|++||........ .+..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~-~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~------- 147 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMD-EDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTM------- 147 (248)
T ss_pred CCCCcEEEECCCCCCCCCCC-cceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCC-------
Confidence 479999999864332222 34778899999999999998753 135899999954321110 0111
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCcee
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVH 231 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 231 (243)
+...+|+.+|.++|.+++.++.+ +++++++++|+.+-++............ .......+. .++++
T Consensus 148 ----~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~ 215 (248)
T PRK07806 148 ----PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPG---AIEARREAA-----GKLYT 215 (248)
T ss_pred ----ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHH---HHHHHHhhh-----cccCC
Confidence 11246999999999999998765 5899999999988776322111000010 000111112 27999
Q ss_pred HHHHHHhhhccC
Q 026091 232 IDDVARAHIFFT 243 (243)
Q Consensus 232 v~Dva~a~~~~~ 243 (243)
++|+|+++++++
T Consensus 216 ~~dva~~~~~l~ 227 (248)
T PRK07806 216 VSEFAAEVARAV 227 (248)
T ss_pred HHHHHHHHHHHh
Confidence 999999998763
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=167.48 Aligned_cols=205 Identities=20% Similarity=0.212 Sum_probs=142.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.++++||||+|+||++++++|+++|++|++++| +++....+.. ... ..++.++.+|++|++++.++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~--~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV-SEAALAATAA--RLP--GAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHh--cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999 4432222111 111 1157899999999998888775
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCc-cEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTV-KRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++.+.+ .+ . ++++++||.+...+.+
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~~-------- 155 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGYP-------- 155 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCCC--------
Confidence 57999999987522 22345678899999999999887743 33 3 5688888755332221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC-------cHHHHHHHHh
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG-------SVRGTLAMVM 215 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~-------~~~~~~~~~~ 215 (243)
....|+.+|.+.|.+++.++++ .+++++++|||.++|+........ ..........
T Consensus 156 --------------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (264)
T PRK12829 156 --------------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL 221 (264)
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH
Confidence 1234999999999999998765 389999999999999864322110 0000000000
Q ss_pred cCccccccccCcCceeHHHHHHhhhcc
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. . .....+++++|+|+++.++
T Consensus 222 ~-~-----~~~~~~~~~~d~a~~~~~l 242 (264)
T PRK12829 222 E-K-----ISLGRMVEPEDIAATALFL 242 (264)
T ss_pred h-c-----CCCCCCCCHHHHHHHHHHH
Confidence 0 0 1123689999999998765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=168.05 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=125.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++| +.+... .+.. .+++++.+|++|.+++.++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~l~---~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAAR-RVDKME---DLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999999 543322 1211 257899999999999988876
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHH----HHHHhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGIL----KSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... .+.+.+...+++|+.++..++ ..+++.+ .++||++||.+...+.+
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~----------- 141 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP----------- 141 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC-----------
Confidence 58999999987543 123456678899998855554 4556666 67999999965322211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..
T Consensus 142 -----------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 142 -----------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred -----------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 1235999999999998877644 589999999999998753
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=179.95 Aligned_cols=206 Identities=18% Similarity=0.204 Sum_probs=142.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcC----C--CCCCCeEEEecCCCChhhHHHHh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNL----P--RASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~----~--~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
+.++||||||+|+||++++++|+++|++|++++| +......+ ..+... . ....+++++.+|+.|.+++.+++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R-n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 4578999999999999999999999999999999 44332221 111110 0 01235899999999999999999
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
.++|+|||++|...... .++...+++|+.++.++++++++.+ +++||++||.++..... .+..+
T Consensus 158 ggiDiVVn~AG~~~~~v-~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~------p~~~~-------- 221 (576)
T PLN03209 158 GNASVVICCIGASEKEV-FDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGF------PAAIL-------- 221 (576)
T ss_pred cCCCEEEEccccccccc-cchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCc------cccch--------
Confidence 99999999998653211 2244678899999999999999998 99999999976421110 00000
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHH
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVA 236 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 236 (243)
.....|...|..+|..+.. +|+++++||||+++++.........+ ... .....+. ..+..+|||
T Consensus 222 --~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~t~~v----~~~-~~d~~~g-----r~isreDVA 285 (576)
T PLN03209 222 --NLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNL----TLS-EEDTLFG-----GQVSNLQVA 285 (576)
T ss_pred --hhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccccccce----eec-cccccCC-----CccCHHHHH
Confidence 0123477888888887754 69999999999999874321100000 000 0111111 468899999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
++++++
T Consensus 286 ~vVvfL 291 (576)
T PLN03209 286 ELMACM 291 (576)
T ss_pred HHHHHH
Confidence 998875
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=166.91 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=147.5
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++.|+++||||+|+||++++++|+++|++|++++| ++........+ ...+.++.++.+|+++.+++.++++
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR-SAPDDEFAEEL---RALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcC-ChhhHHHHHHH---HhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999 44332222222 1224578999999999999888876
Q ss_pred ---cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 ---GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+++...++.|+.++.++.+.+.+. . .++|+++||...+.+.+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~---------- 148 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQG---------- 148 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCC----------
Confidence 47999999986432 112556678999999999998877642 2 36899999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc--HHHHHHHHhcCccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS--VRGTLAMVMGNREEYS 222 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+++.++.+ ++++++.++||.++++......... ........... .++
T Consensus 149 ------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~- 214 (258)
T PRK08628 149 ------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK-IPL- 214 (258)
T ss_pred ------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc-CCc-
Confidence 2245999999999999998764 4899999999999998532211000 00011111111 111
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...++.++|+|+++++++
T Consensus 215 ---~~~~~~~~dva~~~~~l~ 232 (258)
T PRK08628 215 ---GHRMTTAEEIADTAVFLL 232 (258)
T ss_pred ---cccCCCHHHHHHHHHHHh
Confidence 115788999999998763
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-23 Score=163.62 Aligned_cols=208 Identities=17% Similarity=0.172 Sum_probs=148.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+|+||||+|+||++++++|+++|++|++++|+.... ....+.. .+.++.++.+|+++.+++..+++
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~--~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE--TQQQVEA---LGRRFLSLTADLSDIEAIKALVDSAV 75 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHH--HHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999843211 1121222 23468999999999998887764
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+.+.+.+++|+.++.++++++.+. +..+++|++||...+.+.+
T Consensus 76 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 148 (248)
T TIGR01832 76 EEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------- 148 (248)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-------
Confidence 47999999987543 122455678899999999999987643 2135899999976553221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++++. |++++.++||.+..+........ .. ......+. .+.
T Consensus 149 ---------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~-~~~~~~~~-~~~ 210 (248)
T TIGR01832 149 ---------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-ED-RNAAILER-IPA 210 (248)
T ss_pred ---------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hH-HHHHHHhc-CCC
Confidence 11349999999999999998874 89999999999998853321111 01 11111111 111
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..++..+|+|+++++++
T Consensus 211 -----~~~~~~~dva~~~~~l~ 227 (248)
T TIGR01832 211 -----GRWGTPDDIGGPAVFLA 227 (248)
T ss_pred -----CCCcCHHHHHHHHHHHc
Confidence 27899999999988763
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-23 Score=165.29 Aligned_cols=202 Identities=16% Similarity=0.130 Sum_probs=143.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +........ ... +.++.++.+|++|.+++.++++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~-~~~~~~~~~--~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL-DRERGSKVA--KAL---GENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHH--HHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999988 432221111 111 3468899999999988876654
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|++||+||.... ...+.+...+++|+.++.++++++.+. .+.+++|++||...+.+.+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~---------- 152 (255)
T PRK05717 83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP---------- 152 (255)
T ss_pred CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------
Confidence 36999999987532 123345688999999999999998752 1136899999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
..+.|+.+|.+.+.+++.+++++ ++++++++||.+.++....... ......... ..+.
T Consensus 153 ------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~~~~~~~~~-~~~~---- 212 (255)
T PRK05717 153 ------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA---EPLSEADHA-QHPA---- 212 (255)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc---hHHHHHHhh-cCCC----
Confidence 12459999999999999998875 5999999999999975322110 111111111 1111
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|++.++.++
T Consensus 213 -~~~~~~~~va~~~~~l 228 (255)
T PRK05717 213 -GRVGTVEDVAAMVAWL 228 (255)
T ss_pred -CCCcCHHHHHHHHHHH
Confidence 1567888888887765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-23 Score=166.40 Aligned_cols=210 Identities=18% Similarity=0.167 Sum_probs=145.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +........ ... ....+++++++|++|.+++.++++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~-~~~~~~~~~--~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL-QDDLGQNVC--DSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH--HHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999998 433222111 111 123468999999999999988876
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... .+.+++...+++|+.++.++++++.+.. ..++++++||.+...+.+
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------- 163 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL--------- 163 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC---------
Confidence 58999999986432 1224466889999999999988776431 135899998866433221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC--cHHHHHH---HHhcCc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG--SVRGTLA---MVMGNR 218 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~--~~~~~~~---~~~~~~ 218 (243)
....|+.+|.+.|.+.+.++.+. |+++++++||.+.++......+. ....... ......
T Consensus 164 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T PLN02253 164 -------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN 230 (280)
T ss_pred -------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcC
Confidence 11359999999999999998764 89999999999988743221111 0011100 001111
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+ ....++++|+|+++++++
T Consensus 231 ~~l----~~~~~~~~dva~~~~~l~ 251 (280)
T PLN02253 231 ANL----KGVELTVDDVANAVLFLA 251 (280)
T ss_pred CCC----cCCCCCHHHHHHHHHhhc
Confidence 111 014578999999998764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-23 Score=164.93 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=146.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
.+|++|||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.+++.++++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999943322222222221 13467889999999998888775
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|+|||+||.... ...+++...+++|+.++.++++.+.+. + .++||++||.....+.+
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 153 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRD---------- 153 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCC----------
Confidence 37999999986432 234556678999999999988876653 3 56899999965332211
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+++.++.+ +|++++.++||.+.++........ ........ ...++.
T Consensus 154 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~-~~~p~~-- 216 (254)
T PRK08085 154 ------------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFTAWLC-KRTPAA-- 216 (254)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHHHHHH-hcCCCC--
Confidence 2245999999999999999876 489999999999999854322111 11111111 122222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+++
T Consensus 217 ---~~~~~~~va~~~~~l~ 232 (254)
T PRK08085 217 ---RWGDPQELIGAAVFLS 232 (254)
T ss_pred ---CCcCHHHHHHHHHHHh
Confidence 6789999999987763
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-23 Score=165.73 Aligned_cols=213 Identities=15% Similarity=0.094 Sum_probs=143.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
.|+|+||||+|+||++++++|+++|++|++++|+..........+... ....+++++.+|++|.+++..+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAE-YGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-cCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999433222222222111 011368899999999988887765
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++++.+.+. +.-.++|++||.....+.+
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------- 149 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------- 149 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence 46999999986443 223445677899999998888776553 3125899999865332211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCc--cc-c
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNR--EE-Y 221 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~--~~-~ 221 (243)
....|+.+|.+.+.+++.++.+ +|++++++|||.++++.... ..++....... ..+ .. +
T Consensus 150 -----------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 215 (259)
T PRK12384 150 -----------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ---SLLPQYAKKLGIKPDEVEQYY 215 (259)
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh---hhhHHHHHhcCCChHHHHHHH
Confidence 1245999999999999988754 69999999999988763221 11111110000 000 00 0
Q ss_pred -ccccCcCceeHHHHHHhhhccC
Q 026091 222 -SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 -~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.....+.+++++|+++++++++
T Consensus 216 ~~~~~~~~~~~~~dv~~~~~~l~ 238 (259)
T PRK12384 216 IDKVPLKRGCDYQDVLNMLLFYA 238 (259)
T ss_pred HHhCcccCCCCHHHHHHHHHHHc
Confidence 0112347899999999998763
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=166.95 Aligned_cols=210 Identities=15% Similarity=0.036 Sum_probs=145.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++++++||||+|+||++++++|+++|++|+++.|++..... ....+.. .+.++.++.+|+++.+++.++++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE---NGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH---cCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999888774432221 1111111 23467789999999998887765
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+.- ..++||++||..++.+.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 148 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA------------ 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC------------
Confidence 47999999986332 1122245778999999999999888652 13589999997654322
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
++.+.|+.+|.+.|.+++.++++. ++++..++||.+.++........ .....+........ .
T Consensus 149 ----------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~-~~~~~~~~~~~~~~-----~ 212 (252)
T PRK06077 149 ----------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKV-LGMSEKEFAEKFTL-----M 212 (252)
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhc-ccccHHHHHHhcCc-----C
Confidence 133569999999999999998775 79999999999988743211100 00000111111111 2
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+|+++++++
T Consensus 213 ~~~~~~~dva~~~~~~~ 229 (252)
T PRK06077 213 GKILDPEEVAEFVAAIL 229 (252)
T ss_pred CCCCCHHHHHHHHHHHh
Confidence 26899999999988753
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-23 Score=165.74 Aligned_cols=203 Identities=18% Similarity=0.158 Sum_probs=145.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+++++||||+|+||+++++.|+++|++|++++|+..........+.. .+.++.++.+|+.|.+++.++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD---HGGEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999999943322222222222 24478899999999999888876
Q ss_pred cccEEEEeeeccCCC------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDIH------GKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||..... ..+.+.+.+++|+.++.++++.+.+. + .+++|++||.+.+.+.+
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------- 145 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVP----------- 145 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCC-----------
Confidence 479999999875431 22334567999999999999988642 3 46899999976553321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+...|+.+|.+.+.+.+.++.+ +++++++++||.+.++........ .+........+
T Consensus 146 -----------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~ 205 (263)
T PRK06181 146 -----------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQ 205 (263)
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------ccccccccccc
Confidence 2245999999999999887654 489999999999988753321100 00110001112
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
...+++++|+|++++++
T Consensus 206 ~~~~~~~~dva~~i~~~ 222 (263)
T PRK06181 206 ESKIMSAEECAEAILPA 222 (263)
T ss_pred ccCCCCHHHHHHHHHHH
Confidence 23789999999998765
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=164.00 Aligned_cols=206 Identities=18% Similarity=0.177 Sum_probs=144.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +........ .+. +.++.++++|+.|.+++.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR-DPASLEAAR--AEL---GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC-CHHHHHHHH--HHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999 432221111 111 3467889999999887766654
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++|+|||+||.... ...+.+...++.|+.++.++++++.+. ....++|++||....++.+
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------- 145 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------- 145 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-------------
Confidence 47999999986443 123456678999999999999999763 1135788888755433321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC--CCCcHHHHHHHHhcCcccccccc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ--LAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
...+|+.+|.+.|.+++.++.+. |++++++|||.++++..... .......+.+..... .++.
T Consensus 146 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 212 (249)
T PRK06500 146 ---------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQAL-VPLG--- 212 (249)
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhc-CCCC---
Confidence 22469999999999999887653 89999999999999853211 111112121222111 1122
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+|+++.+++
T Consensus 213 --~~~~~~~va~~~~~l~ 228 (249)
T PRK06500 213 --RFGTPEEIAKAVLYLA 228 (249)
T ss_pred --CCcCHHHHHHHHHHHc
Confidence 4678999999988763
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=163.59 Aligned_cols=204 Identities=16% Similarity=0.158 Sum_probs=142.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||+++++.|+++|++|+++.|+..... ..+.. .++.++.+|++|++++.++++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999999998877444222 22221 157889999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... .+.+++...+++|+.++..+.+. +++.+ .+++|++||..++....
T Consensus 78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAA---------- 146 (255)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCC----------
Confidence 47999999987432 23345667889999997666554 44344 57999999976542111
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-CCcHHHHHHHHhcCcccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL-AGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (243)
+....|+.+|.+.+.+++.++.+ +|++++.++||.+-.+...... ............ ...++.
T Consensus 147 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~- 213 (255)
T PRK06463 147 -----------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFR-NKTVLK- 213 (255)
T ss_pred -----------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHH-hCCCcC-
Confidence 12245999999999999999866 4899999999999776432111 111111111111 111222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 214 ----~~~~~~~va~~~~~l~ 229 (255)
T PRK06463 214 ----TTGKPEDIANIVLFLA 229 (255)
T ss_pred ----CCcCHHHHHHHHHHHc
Confidence 5688999999988763
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-23 Score=163.74 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=145.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 81 (243)
+++++||||+|+||+++++.|+++|++|++++| +.+....+. .. .+.+++.+|+++.+.+.++++ ++|+
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~---~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~ 80 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAAR-NAAALDRLA---GE----TGCEPLRLDVGDDAAIRAALAAAGAFDG 80 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH---HH----hCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence 479999999999999999999999999999999 443222211 11 145788999999998888886 4899
Q ss_pred EEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 82 VIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 82 vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
|||+||.... ...+++...++.|+.++.++++++.+. +..++||++||...+.+.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------- 145 (245)
T PRK07060 81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP--------------- 145 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC---------------
Confidence 9999987432 223445667889999999999887764 2136899999976553321
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM 229 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (243)
....|+.+|.++|.+++.++++ ++++++.+|||.++++........... ....... .. ...+
T Consensus 146 -------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~--~~-----~~~~ 210 (245)
T PRK07060 146 -------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK-SGPMLAA--IP-----LGRF 210 (245)
T ss_pred -------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH-HHHHHhc--CC-----CCCC
Confidence 1245999999999999998865 389999999999999864322111111 1111111 11 2368
Q ss_pred eeHHHHHHhhhccC
Q 026091 230 VHIDDVARAHIFFT 243 (243)
Q Consensus 230 i~v~Dva~a~~~~~ 243 (243)
++++|+++++++++
T Consensus 211 ~~~~d~a~~~~~l~ 224 (245)
T PRK07060 211 AEVDDVAAPILFLL 224 (245)
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999998763
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=162.22 Aligned_cols=207 Identities=18% Similarity=0.214 Sum_probs=145.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||||++|++++++|+++|++|+++.|+......... ......+.++.++.+|+++.+++.++++
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV--AEIGALGGKALAVQGDVSDAESVERAVDEAK 78 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH--HHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45556899999999999999999999999999888884432211111 1111124578899999999998888765
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+|+.... ...+.+...++.|+.++.++++.+.+. + .++++++||...+.+.+
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~------- 150 (248)
T PRK05557 79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNP------- 150 (248)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCC-------
Confidence 47999999986443 122345567889999999998888764 3 56899999975443321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+++.++++ .++++++++||.+.++...... ........... ..
T Consensus 151 ---------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~----~~~~~~~~~~~-~~ 210 (248)
T PRK05557 151 ---------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP----EDVKEAILAQI-PL 210 (248)
T ss_pred ---------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC----hHHHHHHHhcC-CC
Confidence 1245999999999998887754 4899999999998766432221 11111111111 11
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+++++.++
T Consensus 211 ~-----~~~~~~~va~~~~~l 226 (248)
T PRK05557 211 G-----RLGQPEEIASAVAFL 226 (248)
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 578999999998765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=167.27 Aligned_cols=200 Identities=23% Similarity=0.295 Sum_probs=135.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC-hhhHHHHh-ccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN-PESFDAAI-AGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~-~~~d~ 81 (243)
.+|+|+||||||++|++++++|+++|++|++++| +++..... + + ...+++++.+|++| .+.+.+.+ .++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~--~---~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR-DVDKAKTS--L---P-QDPSLQIVRADVTEGSDKLVEAIGDDSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec-CHHHHHHh--c---c-cCCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence 4689999999999999999999999999999999 44322111 0 1 12368999999998 47787777 68999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+++..... ++. ..++.|..++.++++++++.+ +++||++||.++|+... ..+..+... .. .+.
T Consensus 89 vi~~~g~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~--~~~~~~~~~-------~~-~~~ 154 (251)
T PLN00141 89 VICATGFRRSF--DPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAM--GQILNPAYI-------FL-NLF 154 (251)
T ss_pred EEECCCCCcCC--CCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCc--ccccCcchh-------HH-HHH
Confidence 99998764221 222 345778889999999999988 89999999988654221 111111100 00 011
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
..|..+|..+|.+++. +|++++++||++++++...... . .......+ ..+|+.+|+|+++..
T Consensus 155 ~~~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~~~--~-------~~~~~~~~-----~~~i~~~dvA~~~~~ 216 (251)
T PLN00141 155 GLTLVAKLQAEKYIRK----SGINYTIVRPGGLTNDPPTGNI--V-------MEPEDTLY-----EGSISRDQVAEVAVE 216 (251)
T ss_pred HHHHHHHHHHHHHHHh----cCCcEEEEECCCccCCCCCceE--E-------ECCCCccc-----cCcccHHHHHHHHHH
Confidence 1245567777776654 6899999999999986422110 0 00011111 257999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 217 ~ 217 (251)
T PLN00141 217 A 217 (251)
T ss_pred H
Confidence 5
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-23 Score=164.38 Aligned_cols=206 Identities=17% Similarity=0.176 Sum_probs=145.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+..+.. ..+.. .+.++.++.+|++|+++++++++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~i~~---~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR-KAEELEEAAAHLEA---LGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 44332221 11111 23467899999999999877664
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS-----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
.+|+|||+||.... .+.+.+...++.|+.++.++++++.+. + .++||++||...+.+.+...
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~----- 160 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEV----- 160 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccc-----
Confidence 47999999986422 223455678889999999999987654 4 57999999976554332110
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.|.+++.+++++ |++++.++|+.+-++..... .....+..... .+..
T Consensus 161 -------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~-~~~~ 222 (259)
T PRK08213 161 -------------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT----LERLGEDLLAH-TPLG 222 (259)
T ss_pred -------------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh----hHHHHHHHHhc-CCCC
Confidence 123469999999999999998764 79999999999977643222 12222222211 1122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|++.++.++
T Consensus 223 -----~~~~~~~va~~~~~l 237 (259)
T PRK08213 223 -----RLGDDEDLKGAALLL 237 (259)
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 456789998887665
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=162.55 Aligned_cols=208 Identities=16% Similarity=0.123 Sum_probs=144.8
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
..++|+++||||+|+||.+++++|++.|++|++++| ++...+.+ ..+.. .+.++.++.+|+.|++++.++++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR-RQAELDQLVAEIRA---EGGEAVALAGDVRDEAYAKALVALAV 78 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 335689999999999999999999999999999999 44332222 22221 23468899999999998888876
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
.+|++||+||.... ...+++...+++|+.++..+.+.+. +.+ .+++|++||...+....
T Consensus 79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~------ 151 (254)
T PRK07478 79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGF------ 151 (254)
T ss_pred HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCC------
Confidence 47999999986431 2234567889999988887766543 444 56899999975431110
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+. |+++++++||.+-.+........ ....... ....+
T Consensus 152 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~-~~~~~ 213 (254)
T PRK07478 152 ---------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--PEALAFV-AGLHA 213 (254)
T ss_pred ---------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--HHHHHHH-HhcCC
Confidence 122459999999999999988764 79999999999988743221111 1111111 11111
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. .+...+|+|+++++++
T Consensus 214 ~~-----~~~~~~~va~~~~~l~ 231 (254)
T PRK07478 214 LK-----RMAQPEEIAQAALFLA 231 (254)
T ss_pred CC-----CCcCHHHHHHHHHHHc
Confidence 22 5678999999988763
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=166.14 Aligned_cols=207 Identities=13% Similarity=0.147 Sum_probs=148.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++|+.......... .....+.++.++.+|++|.+.+.++++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQ--RVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH--HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 458999999999999999999999999999999843322211111 111123468899999999998888775
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|+|||+|+.... ...+.+...++.|+.++.++++++.+. ....+||++||.+++.+.+
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~------------ 190 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE------------ 190 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC------------
Confidence 47999999986432 122345678999999999999998764 1135899999987654332
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+++.++.+. |++++.++||.++++....... ....... ......
T Consensus 191 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~---~~~~~~~-~~~~~~----- 251 (290)
T PRK06701 191 ----------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD---EEKVSQF-GSNTPM----- 251 (290)
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC---HHHHHHH-HhcCCc-----
Confidence 11349999999999999998774 8999999999999985432211 1111111 111122
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
..+.+++|+|+++++++
T Consensus 252 ~~~~~~~dva~~~~~ll 268 (290)
T PRK06701 252 QRPGQPEELAPAYVFLA 268 (290)
T ss_pred CCCcCHHHHHHHHHHHc
Confidence 26899999999998763
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=159.45 Aligned_cols=208 Identities=23% Similarity=0.252 Sum_probs=155.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d 80 (243)
+++|||||++|.+|+++.+.+.++|. +=.++.. +. .+|+++.++.+.+++ ++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-sk----------------------d~DLt~~a~t~~lF~~ekPt 57 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-SK----------------------DADLTNLADTRALFESEKPT 57 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-cc----------------------cccccchHHHHHHHhccCCc
Confidence 47999999999999999999998875 2111111 11 359999999999997 578
Q ss_pred EEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 81 GVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 81 ~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
.|||+|+.... ....+ .+++..|+..-.|++..|-++| +++++.+.|++.+... ...|++|+... .+++
T Consensus 58 hVIhlAAmVGGlf~N~~yn-ldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdk--t~yPIdEtmvh----~gpp 129 (315)
T KOG1431|consen 58 HVIHLAAMVGGLFHNNTYN-LDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDK--TSYPIDETMVH----NGPP 129 (315)
T ss_pred eeeehHhhhcchhhcCCCc-hHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCC--CCCCCCHHHhc----cCCC
Confidence 99999987654 23344 4899999999999999999999 9999999888866444 45677877532 2333
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHH----HHHHHHhcCccccc--c--ccCc
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVR----GTLAMVMGNREEYS--M--LLNI 227 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~----~~~~~~~~~~~~~~--~--~~~~ 227 (243)
.|-...|+.+|.++.-.-+.|.+++|..++.+-|.++|||..+-.+ ...++ .+-.+.......+. + ...|
T Consensus 130 hpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlR 209 (315)
T KOG1431|consen 130 HPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLR 209 (315)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHH
Confidence 4444579999999999999999999999999999999999765442 23333 33333333332222 2 4478
Q ss_pred CceeHHHHHHhhhccC
Q 026091 228 SMVHIDDVARAHIFFT 243 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~~ 243 (243)
+|||++|+|+++++++
T Consensus 210 qFiys~DLA~l~i~vl 225 (315)
T KOG1431|consen 210 QFIYSDDLADLFIWVL 225 (315)
T ss_pred HHhhHhHHHHHHHHHH
Confidence 9999999999998863
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-23 Score=167.21 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=146.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc-hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP-EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
.|+++||||+|+||++++++|+++|++|+++.|+.. +....+..+. ...+.++.++.+|++|.+++.++++
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII--EECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHH--HHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999998876322 1111221111 1123467889999999988887765
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... .+.+++...+++|+.++.++++++.+.- .-.+||++||.+.+.+.+
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~------------ 194 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP------------ 194 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC------------
Confidence 46999999985321 2345677889999999999999887642 125899999977553321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.++++...... .. ....... ....++.
T Consensus 195 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~-~~~~~~~-~~~~~~~---- 257 (294)
T PRK07985 195 ----------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QT-QDKIPQF-GQQTPMK---- 257 (294)
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CC-HHHHHHH-hccCCCC----
Confidence 1235999999999999999876 5999999999999998532110 00 1111111 1122222
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 258 -r~~~pedva~~~~fL~ 273 (294)
T PRK07985 258 -RAGQPAELAPVYVYLA 273 (294)
T ss_pred -CCCCHHHHHHHHHhhh
Confidence 5778999999998874
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=161.55 Aligned_cols=196 Identities=18% Similarity=0.144 Sum_probs=143.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++++++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|+++.+++.++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA---YGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH---hCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999943322222222221 23478899999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||++|.... ...+++...++.|+.++.++++.+.+ .+ .+++|++||...+.+.+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~---------- 151 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAA---------- 151 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCC----------
Confidence 58999999986432 12234567899999999999887764 34 57899999976553331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+++.++.+ +|++++++|||.+.++...... ....
T Consensus 152 ------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~----------~~~~------- 202 (239)
T PRK07666 152 ------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG----------LTDG------- 202 (239)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc----------cccc-------
Confidence 2245999999999999887754 5899999999999887432110 0000
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....++..+|+|++++.+
T Consensus 203 ~~~~~~~~~~~a~~~~~~ 220 (239)
T PRK07666 203 NPDKVMQPEDLAEFIVAQ 220 (239)
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 112467889999988764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-23 Score=163.65 Aligned_cols=202 Identities=18% Similarity=0.146 Sum_probs=145.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||+++++.|+++|++|++++| +......... . ....+..+.+|+++.+++.++++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r-~~~~~~~~~~---~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-SEDVAEVAAQ---L--LGGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH---h--hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 4432211111 1 12356789999999998888775
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++++.+.+. + .++||++||.....+.+
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------- 156 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALE---------- 156 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCC----------
Confidence 46999999987543 122445578999999999999987653 4 57999999976443321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++++ +|++++.++||.+..+........ ....... ...+..
T Consensus 157 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~~-~~~~~~-- 218 (255)
T PRK06841 157 ------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG---EKGERAK-KLIPAG-- 218 (255)
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch---hHHHHHH-hcCCCC--
Confidence 1235999999999999998876 489999999999988753221111 0111111 122222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+++|+|+++++++
T Consensus 219 ---~~~~~~~va~~~~~l~ 234 (255)
T PRK06841 219 ---RFAYPEEIAAAALFLA 234 (255)
T ss_pred ---CCcCHHHHHHHHHHHc
Confidence 6889999999988763
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-23 Score=162.80 Aligned_cols=205 Identities=16% Similarity=0.135 Sum_probs=146.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
|..++|+|+||||+|+||+++++.|+++|++|+++ .| ++... .....+.. .+.++.++.+|++|++++.++++
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI-NEEAAQELLEEIKE---EGGDAIAVKADVSSEEDVENLVEQ 76 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHH
Confidence 66678899999999999999999999999999998 77 44322 12222221 23468899999999998888776
Q ss_pred ------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccc
Q 026091 78 ------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|+|||++|.... ...+.+...+++|+.++.++++.+.+. + .+++|++||.+.+.+.+
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~----- 150 (247)
T PRK05565 77 IVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGAS----- 150 (247)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCC-----
Confidence 68999999987532 223456678999999999988877653 3 56799999976554331
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+++.++++ .|++++.++||.+.++.......... ..... ..
T Consensus 151 -----------------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~----~~~~~-~~ 208 (247)
T PRK05565 151 -----------------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDK----EGLAE-EI 208 (247)
T ss_pred -----------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHH----HHHHh-cC
Confidence 1235999999999888888765 48999999999998765332211111 11100 11
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. ..+...+|++++++++
T Consensus 209 ~~-----~~~~~~~~va~~~~~l 226 (247)
T PRK05565 209 PL-----GRLGKPEEIAKVVLFL 226 (247)
T ss_pred CC-----CCCCCHHHHHHHHHHH
Confidence 11 2567889999987765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=166.97 Aligned_cols=169 Identities=12% Similarity=0.062 Sum_probs=126.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
++|++|||||+|+||++++++|+++|++|++++| +.+... ....+. ..+.++.++.+|++|.+++++++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADV-QQDALDRAVAELR---AQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHH---hcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999 433221 212221 1234688899999999999988863
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCC-----ccEEEEEecceeeecCCCCcc
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGT-----VKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-----~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
+|+|||+||.... ...+.+...+++|+.++.++++. +.+.+. .+++|++||.+.+.+.+
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 156 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP---- 156 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence 7999999997543 22344556789999999997776 444441 15899999977654321
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-----CccEEEEccCceeCCC
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-----GLDLVTIIPSFVTGPF 198 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----gi~~~~~rp~~i~G~~ 198 (243)
+...|+.+|.+.+.+++.++.+. +++++.+.||.+..+.
T Consensus 157 ------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~ 200 (287)
T PRK06194 157 ------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI 200 (287)
T ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence 22459999999999999887764 4888889998886653
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=183.13 Aligned_cols=172 Identities=21% Similarity=0.259 Sum_probs=124.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEee
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 86 (243)
||||||||||||++++++|+++|++|++++| .+... ...+++++.+|++|.. +.++++++|+|||+|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr-~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA 68 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQ-HPHDA-----------LDPRVDYVCASLRNPV-LQELAGEADAVIHLA 68 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-Chhhc-----------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence 7999999999999999999999999999998 43211 0236889999999985 788888999999999
Q ss_pred eccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHh
Q 026091 87 APIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKL 166 (243)
Q Consensus 87 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~ 166 (243)
+.... . ..+.|+.++.|++++|++.+ + ++||+||.+ +.+ + .|.
T Consensus 69 a~~~~---~----~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~~-------~-----------------~~~- 111 (699)
T PRK12320 69 PVDTS---A----PGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GRP-------E-----------------LYR- 111 (699)
T ss_pred ccCcc---c----hhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CCC-------c-----------------ccc-
Confidence 86321 1 12579999999999999999 6 799999852 111 0 032
Q ss_pred hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 167 SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 167 sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|.++.. ++++++++|++++||++........+..+....... ....+||++|++++++.+
T Consensus 112 ---~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~-------~pI~vIyVdDvv~alv~a 173 (699)
T PRK12320 112 ---QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSA-------RPIRVLHLDDLVRFLVLA 173 (699)
T ss_pred ---HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcC-------CceEEEEHHHHHHHHHHH
Confidence 24665543 579999999999999964433223333333222111 112468999999998764
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=160.74 Aligned_cols=204 Identities=23% Similarity=0.226 Sum_probs=130.8
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-cccEEEEee
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-GCTGVIHVA 86 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~a 86 (243)
|+||||||+||++|+..|.+.||+|++++|+.+.... +... .+...+.+.+... ++|+|||+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-------------~~~~---~v~~~~~~~~~~~~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-------------NLHP---NVTLWEGLADALTLGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-------------hcCc---cccccchhhhcccCCCCEEEECC
Confidence 6899999999999999999999999999995442221 1111 1113344445555 699999999
Q ss_pred ecc-CC-CCC-ChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 87 API-DI-HGK-EPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 87 ~~~-~~-~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|.. .. .+. +..+..+++.+..|..|.++..+..+ ++.+|.-|.. +||+.. ....++|+.+..++.+
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAv-GyYG~~-~~~~~tE~~~~g~~Fl-------- 134 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAV-GYYGHS-GDRVVTEESPPGDDFL-------- 134 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceE-EEecCC-CceeeecCCCCCCChH--------
Confidence 853 32 233 44557889999999999999886542 3344444443 355553 5677888876554432
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
++.-..=|+.... ++..|.+++++|.|.|.|+....- ..+...+ +...|.+. -.+.+.++|||++|+++++.++
T Consensus 135 --a~lc~~WE~~a~~-a~~~gtRvvllRtGvVLs~~GGaL-~~m~~~f-k~glGG~~-GsGrQ~~SWIhieD~v~~I~fl 208 (297)
T COG1090 135 --AQLCQDWEEEALQ-AQQLGTRVVLLRTGVVLSPDGGAL-GKMLPLF-KLGLGGKL-GSGRQWFSWIHIEDLVNAILFL 208 (297)
T ss_pred --HHHHHHHHHHHhh-hhhcCceEEEEEEEEEecCCCcch-hhhcchh-hhccCCcc-CCCCceeeeeeHHHHHHHHHHH
Confidence 2222333554444 345699999999999999854322 2222211 12122111 1124556999999999999886
Q ss_pred C
Q 026091 243 T 243 (243)
Q Consensus 243 ~ 243 (243)
+
T Consensus 209 l 209 (297)
T COG1090 209 L 209 (297)
T ss_pred H
Confidence 3
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=161.35 Aligned_cols=204 Identities=22% Similarity=0.208 Sum_probs=145.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
.|+++||||+|+||+++++.|+++|++|++++| +++... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDG-LAAEARELAAALEA---AGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999999999988 443222 2222221 23468999999999999888874
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||++|.... .+.+++...++.|+.++.++++.+.+.. ..+++|++||...+.+.+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 151 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP----------- 151 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------
Confidence 47999999987443 2233455678899999999988876532 135999999976543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+++.++.+ .+++++.++||.+.++........ ........ ....
T Consensus 152 -----------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~-~~~~---- 212 (250)
T PRK12939 152 -----------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD---ERHAYYLK-GRAL---- 212 (250)
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh---HHHHHHHh-cCCC----
Confidence 1235999999999999988765 489999999999988753322110 11111111 1112
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+|+++++++
T Consensus 213 -~~~~~~~dva~~~~~l~ 229 (250)
T PRK12939 213 -ERLQVPDDVAGAVLFLL 229 (250)
T ss_pred -CCCCCHHHHHHHHHHHh
Confidence 26899999999988763
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=162.22 Aligned_cols=207 Identities=16% Similarity=0.161 Sum_probs=143.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|++.|++|++..+++.+.... ...+.. .+..+..+.+|+.+.+++..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh---cCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999998876434332221 111211 23467788999999876655432
Q ss_pred --------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 --------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 --------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... ...+.+...+++|+.++..+++++.+.. ...+||++||...+...+
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 153 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP------ 153 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC------
Confidence 58999999996432 1223466788899999999998877652 135999999976543221
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+++.++.+. |++++.+.||.+.++......... .. .........
T Consensus 154 ----------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~--~~-~~~~~~~~~ 214 (252)
T PRK12747 154 ----------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDP--MM-KQYATTISA 214 (252)
T ss_pred ----------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCH--HH-HHHHHhcCc
Confidence 22459999999999999988764 899999999999998533221111 01 111111111
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. ..+.+++|+|+++.+++
T Consensus 215 ~-----~~~~~~~dva~~~~~l~ 232 (252)
T PRK12747 215 F-----NRLGEVEDIADTAAFLA 232 (252)
T ss_pred c-----cCCCCHHHHHHHHHHHc
Confidence 2 26789999999998763
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-23 Score=160.67 Aligned_cols=192 Identities=19% Similarity=0.183 Sum_probs=135.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 81 (243)
||+++||||+|++|+++++.|+++ ++|++++| +......+.. . ...++++++|++|.+++.++++ ++|+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r-~~~~~~~~~~--~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 74 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR-PAERLDELAA--E----LPGATPFPVDLTDPEAIAAAVEQLGRLDV 74 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC-CHHHHHHHHH--H----hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence 679999999999999999999999 99999999 4432222111 1 1257899999999999999887 4899
Q ss_pred EEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 82 VIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILK----SCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 82 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
|||++|..... ..+.+...++.|+.+..++.+ .+++.+ +++|++||..++.+.+
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~~--------------- 137 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRANP--------------- 137 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcCC---------------
Confidence 99999875431 123355678888888555544 444444 6899999976543221
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHH-cC-ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCce
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEE-HG-LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV 230 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~g-i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (243)
+...|+.+|.+.+.+++.++.+ .+ ++++.++||.+.++..... ... .+... ....++
T Consensus 138 -------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--------~~~-~~~~~-----~~~~~~ 196 (227)
T PRK08219 138 -------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL--------VAQ-EGGEY-----DPERYL 196 (227)
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh--------hhh-hcccc-----CCCCCC
Confidence 2245999999999999988655 35 8999999998776532111 000 01111 123689
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
+++|+|++++++
T Consensus 197 ~~~dva~~~~~~ 208 (227)
T PRK08219 197 RPETVAKAVRFA 208 (227)
T ss_pred CHHHHHHHHHHH
Confidence 999999999875
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=163.40 Aligned_cols=210 Identities=15% Similarity=0.117 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+.+........+... ..+.++.++++|++|.+++.++++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD-VAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999433222222222210 123468899999999998888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|++||+||.... .+.+++...+++|+.++.++++++.+ .+ .++||++||...+.+.+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 153 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIP---------- 153 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCC----------
Confidence 47999999986432 23356778899999999998887654 33 46899999975432221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC--cHHHHHHHHhcCccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG--SVRGTLAMVMGNREEYS 222 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~ 222 (243)
...+|+.+|.+.+.+.+.++.+. |++++.++||.+-.+........ .......... ...++.
T Consensus 154 ------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 220 (260)
T PRK07063 154 ------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETL-ALQPMK 220 (260)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHH-hcCCCC
Confidence 22459999999999999998774 79999999999987743211100 0000111111 111222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 221 -----r~~~~~~va~~~~fl~ 236 (260)
T PRK07063 221 -----RIGRPEEVAMTAVFLA 236 (260)
T ss_pred -----CCCCHHHHHHHHHHHc
Confidence 5778999999998864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=162.04 Aligned_cols=197 Identities=18% Similarity=0.187 Sum_probs=142.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|++.|++|++++|+.. . ..+++++++|++|++++.++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~-~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP-S-------------YNDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc-c-------------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999432 1 1267899999999998888775
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+++...+++|+.++.++++++.+. + .++||++||...+.+.+
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 139 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTR---------- 139 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCC----------
Confidence 47999999986432 233456678899999999998877543 3 57999999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCC-------CCcHHHHHHHHhcCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQL-------AGSVRGTLAMVMGNR 218 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~-------~~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+. +++++.++||.+.++...... +.......... +..
T Consensus 140 ------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 206 (258)
T PRK06398 140 ------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREW-GEM 206 (258)
T ss_pred ------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhh-hhc
Confidence 23469999999999999998775 499999999999877422110 00000000000 111
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+. ..+..++|+|+++++++
T Consensus 207 ~~~-----~~~~~p~eva~~~~~l~ 226 (258)
T PRK06398 207 HPM-----KRVGKPEEVAYVVAFLA 226 (258)
T ss_pred CCc-----CCCcCHHHHHHHHHHHc
Confidence 112 25778999999988763
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=161.87 Aligned_cols=206 Identities=16% Similarity=0.150 Sum_probs=143.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+++++||||+|+||++++++|+++|++|+++.++++....... ......+.++.++.+|++|.+++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVV--QAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHH--HHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999998877653443222211 1111123467889999999998888876
Q ss_pred cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCcccccC
Q 026091 78 GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
.+|+|||+|+.... ...+++...++.|+.++.++++++.+.. .-+++|++||.+.+.+.+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------- 152 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG------- 152 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-------
Confidence 47999999987532 1234556789999999999988776531 0236999999765433310
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+++.++.+. |++++++||+.++|+...... .........+. .++.
T Consensus 153 --------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~---~~~~~~~~~~~-~p~~ 214 (248)
T PRK06123 153 --------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG---EPGRVDRVKAG-IPMG 214 (248)
T ss_pred --------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC---CHHHHHHHHhc-CCCC
Confidence 01249999999999999988764 899999999999998543211 11111111111 1122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|++++++++
T Consensus 215 -----~~~~~~d~a~~~~~l 229 (248)
T PRK06123 215 -----RGGTAEEVARAILWL 229 (248)
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 346789999998875
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=161.01 Aligned_cols=205 Identities=17% Similarity=0.233 Sum_probs=145.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||.+++++|++.|++|+++.|+ .........+.. .+.++.++++|+++.+++.++++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK---EGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999994 321111111211 23568999999999998888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|++||+||.... ...+.+...+++|+.++.++.+++.+ .+ .+++|++||...+.+.+
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 158 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGK---------- 158 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCC----------
Confidence 47999999986432 22345667889999998888766554 34 56899999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++++. |++++.++||.+..+........ ......... ..+..
T Consensus 159 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~~-- 221 (258)
T PRK06935 159 ------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNRNDEILK-RIPAG-- 221 (258)
T ss_pred ------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHHHHHHHh-cCCCC--
Confidence 12359999999999999998764 89999999999988753221111 011111111 11122
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+++++++++
T Consensus 222 ---~~~~~~dva~~~~~l~ 237 (258)
T PRK06935 222 ---RWGEPDDLMGAAVFLA 237 (258)
T ss_pred ---CCCCHHHHHHHHHHHc
Confidence 6888899999988764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=161.72 Aligned_cols=206 Identities=15% Similarity=0.158 Sum_probs=144.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +......+. ... +.++.++++|++|.+++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDI-DADNGAAVA--ASL---GERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 443222211 111 3468899999999998888775
Q ss_pred -cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 -GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 -~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
.+|++||+||.... ...+.+...+++|+.++.++++.+.+. ..-.+||++||.+...+.+
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------- 145 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT------------- 145 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-------------
Confidence 46999999986432 233456678899999999998876643 1136899999976543321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++............. ........++.
T Consensus 146 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~-~~~~~~~~p~~----- 210 (261)
T PRK08265 146 ---------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKA-DRVAAPFHLLG----- 210 (261)
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHH-HHhhcccCCCC-----
Confidence 1235999999999999998876 48999999999998874321111000000 01111111122
Q ss_pred CceeHHHHHHhhhccC
Q 026091 228 SMVHIDDVARAHIFFT 243 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+++
T Consensus 211 r~~~p~dva~~~~~l~ 226 (261)
T PRK08265 211 RVGDPEEVAQVVAFLC 226 (261)
T ss_pred CccCHHHHHHHHHHHc
Confidence 5678999999998764
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=159.40 Aligned_cols=209 Identities=16% Similarity=0.196 Sum_probs=147.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|..+.|+++||||+|+||++++++|+++|++|+++.|+.+..... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA---AGGRAIAVQADVADAAAVTRLFDAA 77 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 556678999999999999999999999999998888744432211 111211 24578999999999999888876
Q ss_pred -----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...++.|+.++.++++++.+.. ..++++++||.....+.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------- 147 (245)
T PRK12937 78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL---------- 147 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC----------
Confidence 47999999986432 2234456778899999999998887652 13589999986543222
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+..+.|+.+|.+.+.+++.++.+ .|++++.++||.+.++....... .. ....... ..++.
T Consensus 148 ------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~-~~~~~~~-~~~~~- 210 (245)
T PRK12937 148 ------------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS--AE-QIDQLAG-LAPLE- 210 (245)
T ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC--HH-HHHHHHh-cCCCC-
Confidence 12346999999999999988766 38999999999988774211111 11 1111111 11222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+++|+++++.+++
T Consensus 211 ----~~~~~~d~a~~~~~l~ 226 (245)
T PRK12937 211 ----RLGTPEEIAAAVAFLA 226 (245)
T ss_pred ----CCCCHHHHHHHHHHHc
Confidence 5678899999987753
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=162.43 Aligned_cols=212 Identities=17% Similarity=0.136 Sum_probs=142.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+++||||+|+||+++++.|++.|++|++++|+.+........+... .....+.++.+|++|++++.+++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKE-FKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhh-cCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999433222222222111 0123567789999999999888864
Q ss_pred --ccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 79 --CTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 --~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||+|+.... ...+.+...+++|+.++..+++++. +.+ .++||++||.+++.... . ...
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--~-~~~ 157 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPK--F-EIY 157 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhcccc--c-hhc
Confidence 7999999975321 1223456778889888777666544 445 67999999976543221 1 111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+..+. .....|+.+|.+.+.+.+.++.+ +++++++++||.++++.. ..+........ ..
T Consensus 158 ~~~~~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~--------~~~~~~~~~~~-~~ 219 (256)
T PRK09186 158 EGTSM---------TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP--------EAFLNAYKKCC-NG 219 (256)
T ss_pred ccccc---------CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC--------HHHHHHHHhcC-Cc
Confidence 11110 01135999999999999888775 489999999999887531 11111111111 11
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+|+++++++
T Consensus 220 -----~~~~~~~dva~~~~~l~ 236 (256)
T PRK09186 220 -----KGMLDPDDICGTLVFLL 236 (256)
T ss_pred -----cCCCCHHHhhhhHhhee
Confidence 26899999999998864
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=160.90 Aligned_cols=196 Identities=20% Similarity=0.218 Sum_probs=141.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+||+++||||+|++|++++++|+++|++|++++| ++.....+ ..+.. .+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVAR-SQDALEALAAELRS---TGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999 44322222 11211 23478899999999998888776
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... .+.+.+...++.|+.++.++++.+.+ .+ .+++|++||...+.+.+
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------- 150 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP--------- 150 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC---------
Confidence 37999999986432 12345567788999998888777643 34 57899999976543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++++ .|++++++|||.+-++....... ... +
T Consensus 151 -------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~-----------~~~--~-- 202 (241)
T PRK07454 151 -------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV-----------QAD--F-- 202 (241)
T ss_pred -------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccccc-----------ccc--c--
Confidence 2245999999999999887654 48999999999998875221100 000 0
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
....++..+|+|++++++
T Consensus 203 -~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 203 -DRSAMLSPEQVAQTILHL 220 (241)
T ss_pred -ccccCCCHHHHHHHHHHH
Confidence 011467899999998775
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=161.51 Aligned_cols=205 Identities=14% Similarity=0.167 Sum_probs=145.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+..+.. ..+. ..+.++..+.+|++|++++.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAAR-HLDALEKLADEIG---TSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHH---hcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 44322222 1111 123468899999999998888775
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... ...+.+...+++|+.++..+.+++.+. ++-.+++++||.+......+
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 155 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP-------- 155 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC--------
Confidence 57999999987543 223456678899999999998877543 21247999988653211100
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
.....|+.+|.+.+.+.+.++.+. |++++.++||.+-++...... . ....... ..+..
T Consensus 156 ------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~----~-~~~~~~~-~~~~~- 216 (253)
T PRK05867 156 ------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT----E-YQPLWEP-KIPLG- 216 (253)
T ss_pred ------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch----H-HHHHHHh-cCCCC-
Confidence 011359999999999999998764 899999999999887533211 1 1111111 11222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++|+
T Consensus 217 ----r~~~p~~va~~~~~L~ 232 (253)
T PRK05867 217 ----RLGRPEELAGLYLYLA 232 (253)
T ss_pred ----CCcCHHHHHHHHHHHc
Confidence 5788999999998864
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=160.67 Aligned_cols=207 Identities=16% Similarity=0.154 Sum_probs=147.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
.++|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.+++.+++++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA---AGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999943321212222222 244688999999999988887763
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|++||+++.... ...+.+...+++|+.++.++.+.+.+ .+ .+++|++||.....+.+
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~--------- 155 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARA--------- 155 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCC---------
Confidence 5999999986432 22345667899999999999876654 45 57899999975432221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+++.++.+ .+++++.++||.+.++........ ........ ......
T Consensus 156 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~-~~~~~~- 218 (256)
T PRK06124 156 -------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGPWLA-QRTPLG- 218 (256)
T ss_pred -------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHHHHH-hcCCCC-
Confidence 1245999999999999988765 389999999999999853322111 11111111 111222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+++++|+++++++++
T Consensus 219 ----~~~~~~~~a~~~~~l~ 234 (256)
T PRK06124 219 ----RWGRPEEIAGAAVFLA 234 (256)
T ss_pred ----CCCCHHHHHHHHHHHc
Confidence 6899999999998763
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=160.31 Aligned_cols=202 Identities=17% Similarity=0.143 Sum_probs=145.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|..+.|+++||||+|+||++++++|+++|++|++++| +.... ..+.+++++++|+.|.+++.+++++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r-~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~~ 70 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR-RAPET----------VDGRPAEFHAADVRDPDQVAALVDAIV 70 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-Chhhh----------hcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 4445789999999999999999999999999999999 43220 0134688999999999988888764
Q ss_pred -----ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 79 -----CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 -----~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||+||.... ...+.+...+++|+.++..+++++.+. +..++||++||.....+.+
T Consensus 71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------- 143 (252)
T PRK07856 71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP------- 143 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC-------
Confidence 5999999986432 223456678999999999999987652 1146899999976442221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+++.++.+. .++++.++||.+.++........ ........ ...+..
T Consensus 144 ---------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~-~~~~~~ 205 (252)
T PRK07856 144 ---------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD--AEGIAAVA-ATVPLG 205 (252)
T ss_pred ---------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC--HHHHHHHh-hcCCCC
Confidence 22459999999999999998774 38999999999988753221111 01111111 111222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+|+++++++
T Consensus 206 -----~~~~p~~va~~~~~L~ 221 (252)
T PRK07856 206 -----RLATPADIAWACLFLA 221 (252)
T ss_pred -----CCcCHHHHHHHHHHHc
Confidence 5678899999988763
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=159.63 Aligned_cols=198 Identities=20% Similarity=0.247 Sum_probs=139.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
|+|+||||+|+||++++++|+++|++|++++| ++.....+.. .. +.+++++.+|+.|.+++.++++ +
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQERLQELKD--EL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hh---ccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999999 5433222211 11 2368899999999998887765 5
Q ss_pred ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 ~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|.|||+||.... .+.+++...+++|+.++..+++.+. +.+ .+++|++||.+.....
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------ 141 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY------------ 141 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCC------------
Confidence 8999999986421 2334566789999999777666554 445 6799999997543211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC-CCCcHHHHHHHHhcCccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ-LAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|.+.+.+.+.++.+ .++++++++||.+.|+..... ........... +
T Consensus 142 ----------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~-------~--- 201 (248)
T PRK10538 142 ----------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--- 201 (248)
T ss_pred ----------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh-------c---
Confidence 12246999999999999998866 379999999999987642211 10000000000 0
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....++..+|+|++++++
T Consensus 202 ~~~~~~~~~dvA~~~~~l 219 (248)
T PRK10538 202 QNTVALTPEDVSEAVWWV 219 (248)
T ss_pred cccCCCCHHHHHHHHHHH
Confidence 011467899999998875
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=161.58 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=143.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++++|++|++++.++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK---DGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999943322212222221 13468889999999998888776
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++..+++.+.+. +...++|++||...+.+.+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP----------- 147 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------
Confidence 47999999986432 123445678899999988877766543 2135899999976543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHhcCc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVMGNR 218 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++....... ............ .
T Consensus 148 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 215 (256)
T PRK08643 148 -----------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK-D 215 (256)
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhc-c
Confidence 1245999999999999988875 48999999999998875321100 000000111111 1
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.... .+...+|+|+++.+|+
T Consensus 216 ~~~~-----~~~~~~~va~~~~~L~ 235 (256)
T PRK08643 216 ITLG-----RLSEPEDVANCVSFLA 235 (256)
T ss_pred CCCC-----CCcCHHHHHHHHHHHh
Confidence 1122 5678999999988763
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-22 Score=159.69 Aligned_cols=207 Identities=17% Similarity=0.219 Sum_probs=146.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
+.|+++||||+|+||++++++|++.|++|++++|+.+.... ....+.. .+.++..+.+|++|.+++.+++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA---AGRRAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999995432211 1122221 234688999999999988887763
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|++||+||.... ...+.+...+++|+.++..+++++.+ .+ .+++|++||.+.+.+.+.
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-------- 154 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG-------- 154 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC--------
Confidence 6999999997543 23455678899999999888776543 33 468999999764433210
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... ..... ..... ...++.
T Consensus 155 ------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~-~~~~~-~~~p~~- 217 (254)
T PRK06114 155 ------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQ-TKLFE-EQTPMQ- 217 (254)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHH-HHHHH-hcCCCC-
Confidence 01245999999999999998875 489999999999998853321 11111 11111 112222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+++++++++
T Consensus 218 ----r~~~~~dva~~~~~l~ 233 (254)
T PRK06114 218 ----RMAKVDEMVGPAVFLL 233 (254)
T ss_pred ----CCcCHHHHHHHHHHHc
Confidence 5778999999988764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-22 Score=157.86 Aligned_cols=200 Identities=21% Similarity=0.181 Sum_probs=144.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 78 (243)
|+.+.++|+||||+|+||++++++|+++|+ +|++++| +.+.... .+.+++++.+|+.|.+++.+++++
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r-~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~ 71 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR-DPESVTD---------LGPRVVPLQLDVTDPASVAAAAEAA 71 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEec-Chhhhhh---------cCCceEEEEecCCCHHHHHHHHHhc
Confidence 334568999999999999999999999998 9999999 4432211 134789999999999999988874
Q ss_pred --ccEEEEeeec-cCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 --CTGVIHVAAP-IDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 --~d~vi~~a~~-~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|+|||+++. ... ...+.+...+++|+.++.++++++.+ .+ .++++++||...+.+.+
T Consensus 72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~--------- 141 (238)
T PRK08264 72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP--------- 141 (238)
T ss_pred CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC---------
Confidence 7999999987 221 23355567889999999999988654 34 57899999976543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC------CCcHHHHHHHHhcC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL------AGSVRGTLAMVMGN 217 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~------~~~~~~~~~~~~~~ 217 (243)
+...|+.+|.+.+.+.+.++++. +++++++||+.+.++...... ......+...+..
T Consensus 142 -------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~~~~- 207 (238)
T PRK08264 142 -------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALEA- 207 (238)
T ss_pred -------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHHHHHHHhC-
Confidence 22459999999999999887663 899999999999887432211 0112222222222
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....++.+|+++.+..+
T Consensus 208 --------~~~~i~~~~~~~~~~~~ 224 (238)
T PRK08264 208 --------GDEEVLPDEMARQVKAA 224 (238)
T ss_pred --------CCCeEeccHHHHHHHHH
Confidence 12567777888776653
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-22 Score=165.11 Aligned_cols=190 Identities=18% Similarity=0.172 Sum_probs=131.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
.+|+++||||+|+||+++++.|+++|++|++++| +...... ...+. ....+++++.+|++|.+++.++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR-NLKKAEAAAQELG---IPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHhh---ccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999 4433222 22221 1234688999999999998888753
Q ss_pred ---ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CC-ccEEEEEecceeeecCCCCccccc
Q 026091 79 ---CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GT-VKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 ---~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||+||.... .+.+.+...+++|+.++.++++.+.+. +. .++||++||...++....+..+.+
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~ 160 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence 8999999996432 133456678999999999998877653 21 259999999765432111100011
Q ss_pred CC-CCCchh-----h-------hhhcCCCCchHHhhHHHHHHHHHHHHHHc----CccEEEEccCceeCC
Q 026091 145 ET-FWSDVD-----Y-------IRKLDIWGKSYKLSKTLAERAALEFAEEH----GLDLVTIIPSFVTGP 197 (243)
Q Consensus 145 e~-~~~~~~-----~-------~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----gi~~~~~rp~~i~G~ 197 (243)
+. ...+.+ . ....-.|...|+.||.+.+.+.+.+++++ |++++++|||.|++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 00 000000 0 00011244679999999988888887764 799999999999864
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=160.48 Aligned_cols=207 Identities=15% Similarity=0.140 Sum_probs=145.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
+.|+++||||+|+||++++++|+++|++|+++.|+..........+.. .+.++.++.+|++|.+++.+++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE---AGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 458999999999999999999999999999999943322222222222 245789999999999988888764
Q ss_pred --ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 --CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 --~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|+|||+||.... ...+.+...+++|+.++..+++++. +.+ .+++|++||...+.+.+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~--------- 152 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAP--------- 152 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCC---------
Confidence 5999999986422 1234566788899999987766543 334 56899999976553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+-++......... .......... .+..
T Consensus 153 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~-~~~~- 216 (253)
T PRK06172 153 -------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD-PRKAEFAAAM-HPVG- 216 (253)
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC-hHHHHHHhcc-CCCC-
Confidence 22459999999999999998774 799999999999887533221100 1111111111 1122
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+++.+++++
T Consensus 217 ----~~~~p~~ia~~~~~l~ 232 (253)
T PRK06172 217 ----RIGKVEEVASAVLYLC 232 (253)
T ss_pred ----CccCHHHHHHHHHHHh
Confidence 5678999999988764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=162.10 Aligned_cols=208 Identities=16% Similarity=0.155 Sum_probs=144.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
..|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++++|+.|.+++.++++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA---AGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 358999999999999999999999999999999943222222222211 23468899999999988887765
Q ss_pred -cccEEEEeeeccCC--------------------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEeccee
Q 026091 78 -GCTGVIHVAAPIDI--------------------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSAST 132 (243)
Q Consensus 78 -~~d~vi~~a~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~ 132 (243)
++|++||+||.... ...+.+...+++|+.++..+++.+. +.+ .++||++||...
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~ 164 (278)
T PRK08277 86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNA 164 (278)
T ss_pred CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchh
Confidence 57999999985322 1124466788999999887665543 344 578999999765
Q ss_pred eecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC---c
Q 026091 133 VHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG---S 206 (243)
Q Consensus 133 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~---~ 206 (243)
+.+.+ ....|+.+|.+.+.+++.++.+. |++++.++||.+.++........ .
T Consensus 165 ~~~~~----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~ 222 (278)
T PRK08277 165 FTPLT----------------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS 222 (278)
T ss_pred cCCCC----------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc
Confidence 43221 22459999999999999998775 89999999999999853221100 0
Q ss_pred HHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 207 VRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.......... ..+.. .+...+|+|+++++++
T Consensus 223 ~~~~~~~~~~-~~p~~-----r~~~~~dva~~~~~l~ 253 (278)
T PRK08277 223 LTERANKILA-HTPMG-----RFGKPEELLGTLLWLA 253 (278)
T ss_pred chhHHHHHhc-cCCcc-----CCCCHHHHHHHHHHHc
Confidence 0001111111 11222 5778999999998864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=161.87 Aligned_cols=209 Identities=15% Similarity=0.121 Sum_probs=144.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||+++++.|+++|++|++++|+ .........+.. .+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS---NGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999994 432222232222 23468899999999988887775
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
.+|++||+||.... ...+.+...+++|+.++..+++++.+.- +-++||++||.+.+.+.+
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 149 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL----------- 149 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-----------
Confidence 37999999987532 1223456788899999988877755431 125899999976543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc---Cccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG---NREEYS 222 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~ 222 (243)
....|+.+|.+.+.+++.++.+. |++++.+.||.+.++.........-....+.... ...+..
T Consensus 150 -----------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (272)
T PRK08589 150 -----------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLG 218 (272)
T ss_pred -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCC
Confidence 12459999999999999998764 7999999999998875322111000000011100 011121
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+|+++++++
T Consensus 219 -----~~~~~~~va~~~~~l~ 234 (272)
T PRK08589 219 -----RLGKPEEVAKLVVFLA 234 (272)
T ss_pred -----CCcCHHHHHHHHHHHc
Confidence 4678999999988763
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=158.17 Aligned_cols=200 Identities=19% Similarity=0.219 Sum_probs=144.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAGC 79 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~ 79 (243)
|..+.|+++||||+|+||++++++|+++|++|++++|+.. .. ...++.++.+|++++ +.+.+.+..+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~-~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~i 68 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK-PD-----------LSGNFHFLQLDLSDDLEPLFDWVPSV 68 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc-cc-----------cCCcEEEEECChHHHHHHHHHhhCCC
Confidence 6666789999999999999999999999999999998432 11 023678999999987 4444445578
Q ss_pred cEEEEeeeccC---C---CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 80 TGVIHVAAPID---I---HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 80 d~vi~~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
|+|||+||... . ...+++...+++|+.++.++++++.+. + .++||++||...+.+.+
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------------ 135 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGG------------ 135 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC------------
Confidence 99999998532 1 223456678999999999999987653 3 46899999976543221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+. |+++++++||.+.++.....+.. ....+... ...+..
T Consensus 136 ----------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~-~~~~~~---- 198 (235)
T PRK06550 136 ----------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP--GGLADWVA-RETPIK---- 198 (235)
T ss_pred ----------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc--hHHHHHHh-ccCCcC----
Confidence 12359999999999999888764 89999999999998854322211 11111111 111222
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 199 -~~~~~~~~a~~~~~l~ 214 (235)
T PRK06550 199 -RWAEPEEVAELTLFLA 214 (235)
T ss_pred -CCCCHHHHHHHHHHHc
Confidence 5788999999998763
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-22 Score=159.73 Aligned_cols=206 Identities=16% Similarity=0.122 Sum_probs=145.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||.+++++|+++|++|++++| +.+....+. ......+.+++++.+|+++.+++.++++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR-TESQLDEVA--EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 443222211 1111124578899999999998887765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh-----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK-----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++.+++.+ .+ .+++|++||.....+.
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~---------- 154 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAG---------- 154 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCC----------
Confidence 57999999986332 22345667899999999999998875 23 5789999996543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+++.++.+. +++++.++||.+.++........ ..+.....+. ....
T Consensus 155 ------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~~-- 217 (263)
T PRK07814 155 ------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN--DELRAPMEKA-TPLR-- 217 (263)
T ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC--HHHHHHHHhc-CCCC--
Confidence 123469999999999999988764 58999999999987643211000 1111111111 1122
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 218 ---~~~~~~~va~~~~~l~ 233 (263)
T PRK07814 218 ---RLGDPEDIAAAAVYLA 233 (263)
T ss_pred ---CCcCHHHHHHHHHHHc
Confidence 4678899999988763
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-22 Score=159.26 Aligned_cols=207 Identities=16% Similarity=0.165 Sum_probs=144.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+.|+++||||+|+||.+++++|+++|++|++++|+..........+.. .+..++++++|+.+.+++.++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA---AGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999943322222222211 23457889999999998887765
Q ss_pred --cccEEEEeeeccC---C---CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPID---I---HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
.+|++||+|+... . ...+.+...++.|+.++..+++++.+ .+ .++++++||...+.+.
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------- 152 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPG--------- 152 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCC---------
Confidence 3799999998532 1 23344567899999999988877643 34 5799999986543221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+++.++.+. |++++.+.||.+..+........ ....+..... .++.
T Consensus 153 -------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~-~~~~ 216 (252)
T PRK07035 153 -------------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN--DAILKQALAH-IPLR 216 (252)
T ss_pred -------------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC--HHHHHHHHcc-CCCC
Confidence 123459999999999999998764 89999999999987753322211 1111111111 1222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 217 -----~~~~~~~va~~~~~l~ 232 (252)
T PRK07035 217 -----RHAEPSEMAGAVLYLA 232 (252)
T ss_pred -----CcCCHHHHHHHHHHHh
Confidence 5778899999988763
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=160.94 Aligned_cols=203 Identities=15% Similarity=0.101 Sum_probs=144.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||++++++|+++|++|+++.|++.+..... ..+.. .+..++++.+|++|.+++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS---HGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 679999999999999999999999999998877444332221 11111 24578999999999998877765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG----TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|+|||+||.... ...+.+...+++|+.++.++++++.+.. +-++||++||.....+.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~----------- 147 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL----------- 147 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-----------
Confidence 37999999986442 2234566789999999999998876542 12589999996432111
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+++.++.+ +|++++.++||.+.++....... ....... ...+..
T Consensus 148 -----------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---~~~~~~~--~~~~~~-- 209 (256)
T PRK12743 148 -----------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---DVKPDSR--PGIPLG-- 209 (256)
T ss_pred -----------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---HHHHHHH--hcCCCC--
Confidence 12346999999999999988875 48999999999999985332111 1111111 111122
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+.+|+++++.++
T Consensus 210 ---~~~~~~dva~~~~~l 224 (256)
T PRK12743 210 ---RPGDTHEIASLVAWL 224 (256)
T ss_pred ---CCCCHHHHHHHHHHH
Confidence 467889999998765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=164.48 Aligned_cols=163 Identities=25% Similarity=0.275 Sum_probs=125.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +++... .+.. .+++++.+|++|.++++++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r-~~~~~~---~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 73 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR-KEEDVA---ALEA-----EGLEAFQLDYAEPESIAALVAQVLELS 73 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHH---HHHH-----CCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999999999999999 543322 2221 257889999999988877765
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHH----HHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSG----TIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|+|||+||.... .+.+.+...+++|+.+ +..++..+++.+ .++||++||..++.+.
T Consensus 74 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~---------- 142 (277)
T PRK05993 74 GGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM---------- 142 (277)
T ss_pred CCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC----------
Confidence 36999999986543 1223456789999998 455566666666 7899999997543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+-.+.
T Consensus 143 ------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 143 ------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred ------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 12346999999999999887644 59999999999998874
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-22 Score=160.97 Aligned_cols=168 Identities=21% Similarity=0.145 Sum_probs=126.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+.++++++||||||+||++++++|+++|++|++++| +++...... ... .+++++.+|++|++++.++++
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r-~~~~~~~~~--~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDL-DEALAKETA--AEL----GLVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh----ccceEEEccCCCHHHHHHHHHHHH
Confidence 5566789999999999999999999999999999998 543322211 111 157889999999998877765
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+.+...+++|+.++.++.+.+. +.+ .++||++||.+...+.+
T Consensus 74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 145 (273)
T PRK07825 74 ADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP------- 145 (273)
T ss_pred HHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC-------
Confidence 36999999987543 2233456788999998888777654 445 67999999976543221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++|+.+.++.
T Consensus 146 ---------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~ 187 (273)
T PRK07825 146 ---------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL 187 (273)
T ss_pred ---------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh
Confidence 2245999999988888777655 48999999999987663
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-22 Score=163.48 Aligned_cols=178 Identities=19% Similarity=0.107 Sum_probs=127.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +........ ... .+++++.+|++|.++++++++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R-~~~~~~~~~--~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR-RPDVAREAL--AGI----DGVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh----hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 3589999999999999999999999999999999 443221111 111 147899999999998888774
Q ss_pred -cccEEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|+|||+||.... ...+.+...+++|+.++..+.+.+ ++.+ ..++|++||.+...... ..+.+.
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~------~~~~~~ 170 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPI------RWDDPH 170 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCC------CccccC
Confidence 47999999996532 233556688999999977776644 3444 46999999975332111 111000
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
. ....++...|+.||.+.+.+.+.++++ +|+++++++||.+.++..
T Consensus 171 ~----~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 171 F----TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred c----cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 0 000112356999999999999888765 489999999999999864
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-22 Score=159.36 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=145.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
.+|+++||||+|+||++++++|+++|++|+++.|+..........+.. .+.++.++++|++|.+++.+++++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 458999999999999999999999999999998843322222222221 234688999999999998888753
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+||.... ...+.+...+++|+.++..+.+.+.+ .+ .++||++||.....+.+
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 154 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRE---------- 154 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCC----------
Confidence 7999999997543 23345667888999998888776654 34 57999999965432221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCC---C-cHHHHHHHHhcCccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLA---G-SVRGTLAMVMGNREE 220 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~---~-~~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++++. |++++.++||.+.++....... . ....+...... ..+
T Consensus 155 ------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 221 (265)
T PRK07097 155 ------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA-KTP 221 (265)
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh-cCC
Confidence 22459999999999999998774 8999999999999985432210 0 00001011111 111
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. .+...+|+|+++++++
T Consensus 222 ~~-----~~~~~~dva~~~~~l~ 239 (265)
T PRK07097 222 AA-----RWGDPEDLAGPAVFLA 239 (265)
T ss_pred cc-----CCcCHHHHHHHHHHHh
Confidence 11 5678899999887763
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=160.44 Aligned_cols=205 Identities=16% Similarity=0.170 Sum_probs=145.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|++.|++|++++|+.... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~--~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPE--TQAQVEA---LGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHH--HHHHHHH---cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999988843211 1111221 23468899999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+++...+++|+.++..+.+++.+. +.-.+||++||...+.+.+
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 151 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI---------- 151 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC----------
Confidence 47999999986442 234567788999999999888876543 2125899999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+-.+........ ....+.... ..+..
T Consensus 152 ------------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~p~~-- 214 (251)
T PRK12481 152 ------------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD--TARNEAILE-RIPAS-- 214 (251)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC--hHHHHHHHh-cCCCC--
Confidence 1134999999999999988875 589999999999987743221110 011111111 11222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+++
T Consensus 215 ---~~~~peeva~~~~~L~ 230 (251)
T PRK12481 215 ---RWGTPDDLAGPAIFLS 230 (251)
T ss_pred ---CCcCHHHHHHHHHHHh
Confidence 5788999999998763
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=160.93 Aligned_cols=167 Identities=20% Similarity=0.201 Sum_probs=125.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-cccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-GCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi 83 (243)
+|+||||||+|+||++++++|++.|++|++++| ++.....+.... ...+.++.++.+|++|++++.++++ ++|+||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ-IAPQVTALRAEA--ARRGLALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHH--HhcCCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 578999999999999999999999999999999 443322222111 1123468899999999999999887 799999
Q ss_pred EeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 84 HVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 84 ~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
|+||.... .+.+.+...+++|+.++.++.+. +++.+ .++||++||...+...+
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~----------------- 140 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGP----------------- 140 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCC-----------------
Confidence 99986432 22334556788898887776554 44556 57999999975432211
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
....|+.+|.+.|.+.+.++.+ +|++++++|||.+..+
T Consensus 141 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~ 181 (257)
T PRK09291 141 -----FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTG 181 (257)
T ss_pred -----CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence 2245999999999998887654 5999999999988654
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-22 Score=158.81 Aligned_cols=203 Identities=16% Similarity=0.118 Sum_probs=141.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG--- 78 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--- 78 (243)
.++|+++||||+|+||++++++|++.|++|+++.|++....... ..+.. .+.+++++.+|++|.+++.+++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA---LGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35679999999999999999999999999988877443222111 11111 234688999999999988888753
Q ss_pred ----ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCC
Q 026091 79 ----CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 ----~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|+|||+||.... ...+.+...+++|+.++.++++.+.+.. .-+++++++|...+...
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~---------- 153 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN---------- 153 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC----------
Confidence 6999999986432 2234566789999999999999877642 13478888775432111
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|.+.|.+.+.++++. +++++.++||.++..... ....+....... .+.
T Consensus 154 ------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~--~~~-- 212 (258)
T PRK09134 154 ------------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAAT--PLG-- 212 (258)
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcC--CCC--
Confidence 112359999999999999998764 499999999998775321 111122221111 111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
...+++|+|++++++
T Consensus 213 ---~~~~~~d~a~~~~~~ 227 (258)
T PRK09134 213 ---RGSTPEEIAAAVRYL 227 (258)
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 457899999998775
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-22 Score=158.63 Aligned_cols=204 Identities=13% Similarity=0.096 Sum_probs=145.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +....... ..+.. .+.++.++.+|++|.+++.++++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 43322222 11211 23468889999999998887765
Q ss_pred --cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++++... + .+++|++||.+...+.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----------- 153 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN----------- 153 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC-----------
Confidence 36999999986432 122445567899999999999988642 3 4589999997643221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+++.++.+ .|++++.+.||.+..+....... +........ ...+.
T Consensus 154 -----------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~-~~~~~-- 216 (255)
T PRK06113 154 -----------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQ-HTPIR-- 216 (255)
T ss_pred -----------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HHHHHHHHh-cCCCC--
Confidence 12245999999999999998765 48999999999998875332211 111111111 12222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+++++++++
T Consensus 217 ---~~~~~~d~a~~~~~l~ 232 (255)
T PRK06113 217 ---RLGQPQDIANAALFLC 232 (255)
T ss_pred ---CCcCHHHHHHHHHHHc
Confidence 5789999999988764
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-22 Score=159.67 Aligned_cols=203 Identities=17% Similarity=0.130 Sum_probs=141.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
|+|+||||+|+||+++++.|+++|++|++++|+..........+.. .+.++.++++|+.|.+++.++++ +
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE---AGGDGFYQRCDVRDYSQLTALAQACEEKWGG 77 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999943322222222221 24578899999999998888775 5
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|+|||+||.... .+.+.+...+++|+.++.++.+.+ ++.+ .+++|++||..++.+.+
T Consensus 78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~------------ 144 (270)
T PRK05650 78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP------------ 144 (270)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC------------
Confidence 8999999997543 122345567889988888876654 4555 67999999976543221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+ .|+++++++||.+.++......... ........+. ..
T Consensus 145 ----------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~-------~~ 206 (270)
T PRK05650 145 ----------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN-PAMKAQVGKL-------LE 206 (270)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc-hhHHHHHHHH-------hh
Confidence 2245999999999998888876 4899999999999988543321111 1111111000 01
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|+.++.+
T Consensus 207 ~~~~~~~~vA~~i~~~ 222 (270)
T PRK05650 207 KSPITAADIADYIYQQ 222 (270)
T ss_pred cCCCCHHHHHHHHHHH
Confidence 1467899999888754
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-22 Score=158.27 Aligned_cols=207 Identities=16% Similarity=0.172 Sum_probs=140.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------ 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------ 78 (243)
||+++||||+|+||++++++|+++|++|+++.+++++...... .+....+..+..+++|++|.+++.+++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV--NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH--HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999876442443221111 11111234688899999999999888764
Q ss_pred -ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCcccccC
Q 026091 79 -CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 79 -~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
+|+|||+++.... ...+.+...++.|+.++.++++.+.+.. +.++||++||...+.+.+.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~------- 151 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG------- 151 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-------
Confidence 5899999986422 1223456789999999988877655431 1357999999765433210
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|...+.+++.++.+ .+++++++||+.++++....... .... ..... ..++.
T Consensus 152 --------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~--~~~~-~~~~~-~~~~~ 213 (247)
T PRK09730 152 --------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE--PGRV-DRVKS-NIPMQ 213 (247)
T ss_pred --------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC--HHHH-HHHHh-cCCCC
Confidence 0124999999999999888755 48999999999999996432211 1111 11111 11111
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...+++|+|+++++++
T Consensus 214 -----~~~~~~dva~~~~~~~ 229 (247)
T PRK09730 214 -----RGGQPEEVAQAIVWLL 229 (247)
T ss_pred -----CCcCHHHHHHHHHhhc
Confidence 3457899999987753
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-22 Score=158.93 Aligned_cols=161 Identities=23% Similarity=0.271 Sum_probs=124.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||++++++|+++|++|++++|+.. .. ...++.++++|+.|.+++.++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~-~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP-DD-----------LPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh-hh-----------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999999999999432 11 12367899999999988876654
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+++...+++|+.++.++.+.+. +.+ .+++|++||...+...+
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~-------- 146 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP-------- 146 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC--------
Confidence 47999999985321 2334566789999999988766543 444 56899999975432210
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
.+...|+.+|.+.+.+++.++.+ .|+++++++||.+.++.
T Consensus 147 -------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 147 -------------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred -------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 02245999999999999998866 38999999999999985
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-21 Score=154.84 Aligned_cols=193 Identities=19% Similarity=0.168 Sum_probs=137.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------G 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~ 78 (243)
.|+|+||||+|+||++++++|+++|++|++++|+.. .. . ..+++.+|++|.+++.++++ +
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~-~~--------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 68 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI-DD--------F-----PGELFACDLADIEQTAATLAQINEIHP 68 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc-cc--------c-----CceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999433 10 0 22578999999998888776 5
Q ss_pred ccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|+|||+++..... ..+.+...++.|+.++.++.+++. +.+ .+++|++||.+.+ +.+
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-~~~------------ 134 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF-GAL------------ 134 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc-CCC------------
Confidence 79999999975431 234455678899999888876654 345 6799999997533 211
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+++.++++ +|++++++|||.+.++......+..-......... ....
T Consensus 135 ----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~---- 198 (234)
T PRK07577 135 ----------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS--IPMR---- 198 (234)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc--CCCC----
Confidence 1245999999999999988765 48999999999999875322211100101111111 1111
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.....+|+|++++++
T Consensus 199 -~~~~~~~~a~~~~~l 213 (234)
T PRK07577 199 -RLGTPEEVAAAIAFL 213 (234)
T ss_pred -CCcCHHHHHHHHHHH
Confidence 355789999998765
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-22 Score=163.99 Aligned_cols=199 Identities=14% Similarity=0.056 Sum_probs=140.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+..+. ...+.. .+.++.++.+|++|.++++++++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R-~~~~l~~~~~~l~~---~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLAR-GEEGLEALAAEIRA---AGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH---cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999 4433222 222221 24578899999999999888865
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... ...+.+...+++|+.++.++.+. +++.+ .++||++||...+.+.+
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~--------- 152 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIP--------- 152 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCC---------
Confidence 47999999986432 23345667888888877765554 44444 57899999987653321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ .++++++++||.+.++.... ...........
T Consensus 153 -------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~~~~- 210 (334)
T PRK07109 153 -------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVEPQP- 210 (334)
T ss_pred -------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhccccccC-
Confidence 2245999999999998887655 36999999999998874211 00011111111
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+..++|+|++++++
T Consensus 211 ----~~~~~~pe~vA~~i~~~ 227 (334)
T PRK07109 211 ----VPPIYQPEVVADAILYA 227 (334)
T ss_pred ----CCCCCCHHHHHHHHHHH
Confidence 12567899999998875
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-22 Score=158.92 Aligned_cols=206 Identities=17% Similarity=0.157 Sum_probs=140.1
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
+|+||||+|+||+++++.|+++|++|++++|+..+....+. .+.... ....+..+++|++|.+++.++++ +
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH-GEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999999999999999999995233222221 111110 01234568899999998887765 4
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHH----HHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVS----GTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|+|||+||.... ...+++...++.|+. .+..++..+++.+ .++||++||...+.+.+
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~------------ 146 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEP------------ 146 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCC------------
Confidence 6999999987543 122345567888887 6677777777766 68999999976554331
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-----CccEEEEccCceeCCCCCCCCCCcH-HHHHHHHhcCcccccc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-----GLDLVTIIPSFVTGPFICPQLAGSV-RGTLAMVMGNREEYSM 223 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----gi~~~~~rp~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+. +++++.++||.+.++.......... ........ ...+..
T Consensus 147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~- 214 (251)
T PRK07069 147 ----------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA-RGVPLG- 214 (251)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHh-ccCCCC-
Confidence 12359999999999999887662 4899999999999986432211000 00111111 111222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 215 ----~~~~~~~va~~~~~l 229 (251)
T PRK07069 215 ----RLGEPDDVAHAVLYL 229 (251)
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 567899999998875
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=158.13 Aligned_cols=206 Identities=18% Similarity=0.127 Sum_probs=142.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.+++++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASR-SQEKVDAAVAQLQQ---AGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999 4432221 122221 234678899999999988887753
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|++||+|+.... ...+.+...+++|+.++.++++++.+.- +.++|+++||..++...+
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~----------- 152 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP----------- 152 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC-----------
Confidence 6999999975322 2234556788899999999998876531 125899999975432211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC-CCCCCcHHHHHHHHhcCccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC-PQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+++.++.+ .|++++.++||.+.+.... ...+. ........ ...++
T Consensus 153 -----------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~--~~~~~~~~-~~~~~--- 215 (264)
T PRK07576 153 -----------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS--PELQAAVA-QSVPL--- 215 (264)
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC--HHHHHHHH-hcCCC---
Confidence 2245999999999999998766 4799999999998753211 11110 00111111 11122
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
..+...+|+|+++++++
T Consensus 216 --~~~~~~~dva~~~~~l~ 232 (264)
T PRK07576 216 --KRNGTKQDIANAALFLA 232 (264)
T ss_pred --CCCCCHHHHHHHHHHHc
Confidence 25778999999988763
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-22 Score=158.32 Aligned_cols=167 Identities=20% Similarity=0.215 Sum_probs=128.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
||+++||||+|+||++++++|+++|++|++++| +......+.. .. .+.+++++++|++|.+++.++++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~--~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDI-NEAGLAALAA--EL--GAGNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH--Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999 5433222211 11 13468999999999998888765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+ .+ ..+||++||....++..
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 144 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQP---------- 144 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCC----------
Confidence 35999999987543 22344567899999999999887754 33 47899999976544331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
....|+.+|.+.+.+.+.++.+ +++++++++||.+.++..
T Consensus 145 ------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~ 187 (260)
T PRK08267 145 ------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAML 187 (260)
T ss_pred ------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccc
Confidence 1235999999999999998755 489999999999987643
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=156.06 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=142.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||+++++.|+++|++|+++.|+..+... ...........++.++.+|+.|.+++.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAK--DWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHH--HHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999999994331111 1111111123468999999999998888775
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
.+|++||++|.... ...+.+...++.|+.++.++.+. +++.+ .++||++||...+.+.+
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~----------- 147 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQF----------- 147 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCC-----------
Confidence 37999999986432 23355667889999999988554 44455 67999999976543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+++.++.+ .|+++++++||.+.++...... .......... .++.
T Consensus 148 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~----~~~~~~~~~~-~~~~--- 208 (245)
T PRK12824 148 -----------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG----PEVLQSIVNQ-IPMK--- 208 (245)
T ss_pred -----------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC----HHHHHHHHhc-CCCC---
Confidence 1235999999999998888754 4899999999999987533221 1111111111 1122
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+++++.+++
T Consensus 209 --~~~~~~~va~~~~~l~ 224 (245)
T PRK12824 209 --RLGTPEEIAAAVAFLV 224 (245)
T ss_pred --CCCCHHHHHHHHHHHc
Confidence 5677899999887653
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-22 Score=160.13 Aligned_cols=209 Identities=20% Similarity=0.214 Sum_probs=145.8
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|++.|++|++++| +....+.+ ... .+.++.++++|+.|.+++.++++
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~l---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK-SAAGLQEL---EAA--HGDAVVGVEGDVRSLDDHKEAVARCV 74 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH---Hhh--cCCceEEEEeccCCHHHHHHHHHHHH
Confidence 6656789999999999999999999999999999999 44322222 111 13468899999999988877765
Q ss_pred ----cccEEEEeeeccCC-----C-CC----ChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcc
Q 026091 78 ----GCTGVIHVAAPIDI-----H-GK----EPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~-~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
.+|++||+||.... . .. +.+...+++|+.++..+++++.+.. .-+++|++||...+.+.+
T Consensus 75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 150 (262)
T TIGR03325 75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG---- 150 (262)
T ss_pred HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC----
Confidence 46999999986421 1 11 2466789999999999999887642 125799998876543221
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCC-C---CCcHHH--HHHH
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQ-L---AGSVRG--TLAM 213 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~-~---~~~~~~--~~~~ 213 (243)
....|+.+|.+.+.+.+.++.+. .++++.+.||.+..+..... . ...... ..+.
T Consensus 151 ------------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~ 212 (262)
T TIGR03325 151 ------------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDM 212 (262)
T ss_pred ------------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhh
Confidence 12359999999999999998875 49999999999988753321 0 000000 0011
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ...++. .+...+|+|+++++++
T Consensus 213 ~~-~~~p~~-----r~~~p~eva~~~~~l~ 236 (262)
T TIGR03325 213 LK-SVLPIG-----RMPDAEEYTGAYVFFA 236 (262)
T ss_pred hh-hcCCCC-----CCCChHHhhhheeeee
Confidence 11 111222 5778899999988763
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-22 Score=159.46 Aligned_cols=213 Identities=15% Similarity=0.181 Sum_probs=142.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT-NLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|+++.++.....+....+. .....+.+++++++|++|.+++.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 45899999999999999999999999998888764332222222111 111123468899999999999888775
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEE-ecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYT-SSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~-Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... ...+.+...+++|+.++..+++++.+.- ..++++++ ||.... ..+
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-~~~----------- 154 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-FTP----------- 154 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-cCC-----------
Confidence 47999999996432 2334566789999999999999887642 12467766 443211 110
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.|.+.+.++++. |+++++++||.+.++...+......... ...........
T Consensus 155 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~ 219 (257)
T PRK12744 155 -----------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY----HKTAAALSPFS 219 (257)
T ss_pred -----------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc----ccccccccccc
Confidence 12459999999999999998774 7999999999998875322211000000 00000000011
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
...+.+++|+|+++.+++
T Consensus 220 ~~~~~~~~dva~~~~~l~ 237 (257)
T PRK12744 220 KTGLTDIEDIVPFIRFLV 237 (257)
T ss_pred cCCCCCHHHHHHHHHHhh
Confidence 225889999999998864
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-21 Score=155.75 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=146.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||+++++.|+++|++|++++|+.+........+... ..+.++.++.+|+++.+++.++++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEE-FPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999433222222222111 123578899999999988777665
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...++.|+.++.++++++.+ .+ .+++|++||...+.+.+
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---------- 155 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR---------- 155 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC----------
Confidence 47999999986322 23455667899999999999888754 34 57899999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+++.++.+ +|++++.++||.+.++........ ....+.... ..++.
T Consensus 156 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~~~~~~~~~-~~~~~-- 218 (257)
T PRK09242 156 ------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--PDYYEQVIE-RTPMR-- 218 (257)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--hHHHHHHHh-cCCCC--
Confidence 2245999999999999988765 489999999999999864332211 111111111 11222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|++.++.++
T Consensus 219 ---~~~~~~~va~~~~~l 233 (257)
T PRK09242 219 ---RVGEPEEVAAAVAFL 233 (257)
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 466789999988765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=159.27 Aligned_cols=167 Identities=20% Similarity=0.252 Sum_probs=127.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------ 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------ 78 (243)
+|+++||||+|+||+++++.|+++|++|++++| +.+...... ..... ..++.++++|++|.+++.+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r-~~~~~~~~~--~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVAR-RTDALQAFA--ARLPK-AARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hhccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999999999 443322211 11211 12788999999999999887753
Q ss_pred -ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 -CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILK----SCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 -~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+||.... ...+.+...+++|+.++.++++ .+++.+ .++||++||.+.+.+.+
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~---------- 146 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLP---------- 146 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC----------
Confidence 6999999987542 1124466789999999999877 445555 67999999976553331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.
T Consensus 147 ------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 147 ------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 1235999999999999888644 58999999999999884
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=156.97 Aligned_cols=202 Identities=18% Similarity=0.175 Sum_probs=138.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +........ ... ...++++|++|.+++.++++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~--~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI-DPEAGKAAA--DEV-----GGLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH--HHc-----CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999999 433221111 111 22678999999999888876
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++..+++.+.+ .+ ..++|++||.....+.+.
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~------- 149 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT------- 149 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC-------
Confidence 46999999986432 11234667889999999888776543 34 468999998643322210
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+.+.++.+ .|+++++++||.+.++..............+.... .++.
T Consensus 150 --------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~ 213 (255)
T PRK06057 150 --------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH--VPMG 213 (255)
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc--CCCC
Confidence 1234999999888888876554 38999999999999886433221111111111111 1122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+++++.++
T Consensus 214 -----~~~~~~~~a~~~~~l 228 (255)
T PRK06057 214 -----RFAEPEEIAAAVAFL 228 (255)
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 678999999998765
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=156.72 Aligned_cols=208 Identities=19% Similarity=0.200 Sum_probs=144.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.........+.. .+.++.++++|+++.+++.++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDI-SPEIEKLADELCG---RGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 4432222222222 23468899999999998888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|+|||+||.... .+.+.+...++.|+.++.++++.+.+ .+ .+++|++||........
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 149 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVAD---------- 149 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCC----------
Confidence 46999999996432 22344556789999999999888664 33 46899999864311100
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC----CCcHHHHHHHHhcCccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL----AGSVRGTLAMVMGNREE 220 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~----~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... +............ ..+
T Consensus 150 -----------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~p 217 (263)
T PRK08226 150 -----------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK-AIP 217 (263)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc-cCC
Confidence 112359999999999999998764 899999999999987432210 0011111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+...+|+|+++++++
T Consensus 218 ~~-----~~~~~~~va~~~~~l~ 235 (263)
T PRK08226 218 LR-----RLADPLEVGELAAFLA 235 (263)
T ss_pred CC-----CCCCHHHHHHHHHHHc
Confidence 22 5678999999987763
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=153.31 Aligned_cols=171 Identities=19% Similarity=0.270 Sum_probs=132.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++++++|||||++||..+++.|+++|++|+++.| +.+..+.+. .+.+. .+..++++.+|+++++++.++.+
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR-~~~kL~~la~~l~~~--~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYNLILVAR-REDKLEALAKELEDK--TGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-cHHHHHHHHHHHHHh--hCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999 554333333 22221 24567899999999999888875
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++|||||.... .+.+...++++.|+.+...|..+.. +.+ -.+||.++|.+++.+.+
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p--------- 151 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTP--------- 151 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCc---------
Confidence 48999999986433 3345566899999998777766544 444 56999999987654432
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~ 200 (243)
....|+.||...-.+.+.+..+ +|+.++.+.||.+..+...
T Consensus 152 -------------~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 152 -------------YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence 3457999999888887777665 4899999999999998654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=157.00 Aligned_cols=205 Identities=15% Similarity=0.166 Sum_probs=144.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||+++++.|+++|++|+++.| +.+....+. .+.. ...+++++.+|+++.+++.++++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASR-RVERLKELRAEIEA---EGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 543322221 1111 13468899999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----C-------CccEEEEEecceeeecCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----G-------TVKRVVYTSSASTVHFSGKD 139 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~~~i~~Ss~~~~~~~~~~ 139 (243)
++|++||+|+.... .+.+.+...++.|+.++.++++.+... . ...++|++||...+...
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--- 160 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL--- 160 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---
Confidence 47999999986432 122456678899999999998876532 1 02589999997644221
Q ss_pred cccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc
Q 026091 140 VDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG 216 (243)
Q Consensus 140 ~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~ 216 (243)
++..+|+.+|.+.+.+++.++.+ +++++++++||+++++........ . ......+
T Consensus 161 -------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~--~-~~~~~~~ 218 (258)
T PRK06949 161 -------------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET--E-QGQKLVS 218 (258)
T ss_pred -------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh--H-HHHHHHh
Confidence 12245999999999999998776 489999999999999864322111 1 1111111
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..... .+...+|+++++.+++
T Consensus 219 -~~~~~-----~~~~p~~~~~~~~~l~ 239 (258)
T PRK06949 219 -MLPRK-----RVGKPEDLDGLLLLLA 239 (258)
T ss_pred -cCCCC-----CCcCHHHHHHHHHHHh
Confidence 11112 5777899999988763
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-22 Score=157.08 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=140.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+|+||||+|+||+++++.|+++|++|+++.+++++..... ..+.. ...++.++++|++|.+++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA---AGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999987765344332221 11111 23468999999999988877765
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-C-----CccEEEEEecceeeecCCCCccccc
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS-G-----TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-----~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+++...+++|+.++..+++.+.+. . .-.+||++||.+.+.+.+.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------ 152 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------ 152 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------
Confidence 47999999986432 123345677899999998887654432 1 0136999999765433210
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+. |++++++|||.+.++...... .. .. .... +...+.
T Consensus 153 ---------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~-~~-~~~~-~~~~~~ 213 (248)
T PRK06947 153 ---------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QP-GR-AARL-GAQTPL 213 (248)
T ss_pred ---------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CH-HH-HHHH-hhcCCC
Confidence 01249999999999999888764 899999999999998532210 10 11 1111 111112
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ....++|++++++++
T Consensus 214 ~-----~~~~~e~va~~~~~l 229 (248)
T PRK06947 214 G-----RAGEADEVAETIVWL 229 (248)
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 357789999998765
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=153.68 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=141.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
++|+|+||||+|+||++++++|+++|++|+++.|++.+..+.+. .. .+.+++.+|++|.+++.++++ ++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~--~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA--QE-----TGATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH--HH-----hCCeEEecCCCCHHHHHHHHHHhCCCc
Confidence 46899999999999999999999999999888774443222211 11 145788899999988888775 379
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
++||+||.... .+.+++...+++|+.++..++..+.+. ...+++|++||..... .+
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-~~----------------- 139 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-MP----------------- 139 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-CC-----------------
Confidence 99999986432 223456789999999999998766664 2146899999964311 00
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCcee
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVH 231 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 231 (243)
.++...|+.+|.+.+.+++.++.+ +|++++.++||.+..+...... . ....... ..... .+..
T Consensus 140 ---~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~----~-~~~~~~~-~~~~~-----~~~~ 205 (237)
T PRK12742 140 ---VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG----P-MKDMMHS-FMAIK-----RHGR 205 (237)
T ss_pred ---CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc----H-HHHHHHh-cCCCC-----CCCC
Confidence 012346999999999999988765 4799999999999887532211 1 1111111 11122 5688
Q ss_pred HHHHHHhhhccC
Q 026091 232 IDDVARAHIFFT 243 (243)
Q Consensus 232 v~Dva~a~~~~~ 243 (243)
.+|+++++.+++
T Consensus 206 p~~~a~~~~~l~ 217 (237)
T PRK12742 206 PEEVAGMVAWLA 217 (237)
T ss_pred HHHHHHHHHHHc
Confidence 999999988763
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=154.31 Aligned_cols=167 Identities=23% Similarity=0.281 Sum_probs=127.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++++++||||+|++|++++++|+++|++|++++| ++...... ..+.. ..+++++++|+.|.+++.++++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~l~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITAR-DQKELEEAAAELNN----KGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC-CHHHHHHHHHHHhc----cCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999 44332221 21211 1478999999999998888776
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+++.... ...+++...+++|+.++.++++++.+. + .+++|++||...+.+..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~---------- 148 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTNFFA---------- 148 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhccCCC----------
Confidence 57999999986543 223445578999999999998887653 3 56899999975432211
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|..+|.+.+.+.+.++.+ +|++++++||+.+.++.
T Consensus 149 ------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 149 ------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence 1235999999999998887644 48999999999998864
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=156.33 Aligned_cols=209 Identities=16% Similarity=0.137 Sum_probs=146.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||+++++.|+++|++ |++++|+..........+.. .+.++.++.+|+++++++.++++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA---LGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999998 99999843222212222211 23468889999999998888775
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||++|.... ...+.+...+++|+.++.++++.+.+. +..+++|++||...+.+.+
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------- 152 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP--------- 152 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC---------
Confidence 47999999986542 223445667899999999998877553 2135799999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC---CCCcHHHHHHHHhcCccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ---LAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.|.+.+.++.++ +++++.++||+++++..... +......+..... ....
T Consensus 153 -------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~ 218 (260)
T PRK06198 153 -------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA-ATQP 218 (260)
T ss_pred -------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh-ccCC
Confidence 12459999999999999888764 69999999999999853211 0001111111111 1112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+++++|+++++.+++
T Consensus 219 ~~-----~~~~~~~~a~~~~~l~ 236 (260)
T PRK06198 219 FG-----RLLDPDEVARAVAFLL 236 (260)
T ss_pred cc-----CCcCHHHHHHHHHHHc
Confidence 22 6789999999998763
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=155.11 Aligned_cols=169 Identities=16% Similarity=0.133 Sum_probs=126.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----CT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d 80 (243)
||+++||||+|+||.+++++|+++|++|++++|+.+........+... .+.+++++++|+.|.+++.+++++ +|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR--GAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh--cCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 468999999999999999999999999999999433222222222111 234789999999999998888763 69
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
.+||++|.... ...+.+...+++|+.++.++++++.+ .+ .++++++||.....+.+
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------------- 143 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRA-------------- 143 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCC--------------
Confidence 99999986433 12233446788999999999888765 34 57899999965332211
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|...+.+.+.++.+ +|++++.++|+.+.++.
T Consensus 144 --------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 144 --------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred --------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 1235999999999999988654 48999999999999874
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=157.64 Aligned_cols=208 Identities=13% Similarity=0.106 Sum_probs=143.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|++.|++|++++| +.+..... ..+... .+.++.++.+|++|+++++++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR-NEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 4689999999999999999999999999999999 44322221 111111 13468899999999998888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+.+. +.+ .++||++||.+...+.+
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~---------- 152 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIP---------- 152 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCC----------
Confidence 47999999986432 2345677888999888777665544 444 57999999976432211
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHhcC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVMGN 217 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~~~ 217 (243)
....|+.+|.+.+.+.+.++.+. ||+++.+.||.+..+....... ........... .
T Consensus 153 ------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 219 (263)
T PRK08339 153 ------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA-K 219 (263)
T ss_pred ------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh-c
Confidence 12349999999999999998774 8999999999998763211000 00011111111 1
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+.. .+...+|+|+++.+|+
T Consensus 220 ~~p~~-----r~~~p~dva~~v~fL~ 240 (263)
T PRK08339 220 PIPLG-----RLGEPEEIGYLVAFLA 240 (263)
T ss_pred cCCcc-----cCcCHHHHHHHHHHHh
Confidence 11222 5788999999998763
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-21 Score=154.03 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=127.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||++++++|+++|++|++++| ++...... ..+.. ...+.+++++.+|++|.+++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR-RTDRLEELKAELLA-RYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh-hCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999 44332222 11111 1113468999999999988877765
Q ss_pred -cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||..... ..+.+...+++|+.++.++++.+. +.+ .++||++||.....+.+.
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~--------- 149 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPG--------- 149 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCC---------
Confidence 479999999865431 223345678999999998888764 345 679999999765433210
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
+...|+.+|.+.+.+.+.++.+ .++++++++||.+.++.
T Consensus 150 ------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 191 (248)
T PRK08251 150 ------------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM 191 (248)
T ss_pred ------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence 1245999999999999888765 37999999999998874
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=154.73 Aligned_cols=204 Identities=16% Similarity=0.218 Sum_probs=141.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
.|+++||||+|+||++++++|+++|++|+++.+++.... ...+......+..+..+.+|+.|.+++.++++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRR--VKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999888655333211 11122211124467888999999998888765
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... .+.+++...+++|+.++.++.+.+. +.+ .+++|++||.....+.+
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------- 148 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF----------- 148 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCC-----------
Confidence 47999999987542 2334566788999999877766544 445 67999999965332211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+.+.++++ +|++++.++||.+.++......+ .......+. ...
T Consensus 149 -----------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~----~~~~~~~~~-~~~---- 208 (246)
T PRK12938 149 -----------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----DVLEKIVAT-IPV---- 208 (246)
T ss_pred -----------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh----HHHHHHHhc-CCc----
Confidence 2245999999999998888765 48999999999999885432211 111111111 111
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
..+...+|+++++.+++
T Consensus 209 -~~~~~~~~v~~~~~~l~ 225 (246)
T PRK12938 209 -RRLGSPDEIGSIVAWLA 225 (246)
T ss_pred -cCCcCHHHHHHHHHHHc
Confidence 15678899999988763
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-21 Score=154.47 Aligned_cols=200 Identities=20% Similarity=0.205 Sum_probs=141.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++++++||||+|+||++++++|+++|+.|.+..| +........ ... +.+++++.+|++|.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT-RVEKLEALA--AEL---GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHH--HHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999888877 443322211 111 2468899999999998888754
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||...+.+.+
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------- 147 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNP---------- 147 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCC----------
Confidence 47999999987432 12345667889999999999887653 23 57899999976554332
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++++ +|+++++++|+.+.++...... ......... ...+
T Consensus 148 ------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~----~~~~~~~~~-~~~~--- 207 (245)
T PRK12936 148 ------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN----DKQKEAIMG-AIPM--- 207 (245)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC----hHHHHHHhc-CCCC---
Confidence 1134999999999888887765 4899999999988776432211 111111111 1111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+.+|+++++.++
T Consensus 208 --~~~~~~~~ia~~~~~l 223 (245)
T PRK12936 208 --KRMGTGAEVASAVAYL 223 (245)
T ss_pred --CCCcCHHHHHHHHHHH
Confidence 2567899999998765
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=156.53 Aligned_cols=162 Identities=21% Similarity=0.250 Sum_probs=125.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
||+++||||+|+||+++++.|+++|++|++++| +...... +.. .+++++.+|++|.+++.++++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~---~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 71 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATAR-KAEDVEA---LAA-----AGFTAVQLDVNDGAALARLAEELEAEHG 71 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHH---HHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999 4432222 111 256889999999998887764
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|+|||+||.... ...+.+...+++|+.++.++++.+.+. + .+++|++||...+.+.+
T Consensus 72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 138 (274)
T PRK05693 72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTP------------ 138 (274)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCC------------
Confidence 47999999986432 223456678999999999999887542 3 46899999966443221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.
T Consensus 139 ----------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 ----------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred ----------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 2245999999999998887765 59999999999998764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=153.83 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=140.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||+++++.|+++|++|++++| +....... ..+.. ...++.++++|++|++++.++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR-TKEKLEEAKLEIEQ---FPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999999999 44322222 11221 13478899999999998888765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|.|||+||.... ...+.+...+++|+.++.++++++.+. +.-.+||++||...+....
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 146 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP---------- 146 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC----------
Confidence 46999999985322 223446678999999999999888542 2135899999875321110
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++......... ........ ....+.
T Consensus 147 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~~~~~~-~~~~~~- 211 (252)
T PRK07677 147 ------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEAAKRTI-QSVPLG- 211 (252)
T ss_pred ------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC-HHHHHHHh-ccCCCC-
Confidence 1134999999999999988766 3899999999999864211110000 11111111 111222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+++++.++
T Consensus 212 ----~~~~~~~va~~~~~l 226 (252)
T PRK07677 212 ----RLGTPEEIAGLAYFL 226 (252)
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 577889999988765
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=156.04 Aligned_cols=202 Identities=17% Similarity=0.175 Sum_probs=142.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+.|+++||||+|+||++++++|+++|++|++++|+.. ... ..++.++++|++|.++++++++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~-~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG-DGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc-ccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999998332 211 2367889999999998888776
Q ss_pred --cccEEEEeeeccCC--------------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCC
Q 026091 78 --GCTGVIHVAAPIDI--------------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 78 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~ 138 (243)
.+|++||+||.... ...+.+...+++|+.++..+++++.+.. ...+||++||...+.+.+
T Consensus 75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 153 (266)
T PRK06171 75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE- 153 (266)
T ss_pred cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-
Confidence 36999999986422 1234456789999999999988877542 135899999976543221
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCcee-CCCCCCCCC--------Cc
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVT-GPFICPQLA--------GS 206 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~-G~~~~~~~~--------~~ 206 (243)
....|+.+|.+.+.+++.++.+ +|+++++++||.+. .+....... ..
T Consensus 154 ---------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~ 212 (266)
T PRK06171 154 ---------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGIT 212 (266)
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCC
Confidence 1245999999999999998876 48999999999985 322111100 00
Q ss_pred HHHHHHHHhc-CccccccccCcCceeHHHHHHhhhccC
Q 026091 207 VRGTLAMVMG-NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 207 ~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.......... ...++. .+...+|+|+++.+|+
T Consensus 213 ~~~~~~~~~~~~~~p~~-----r~~~~~eva~~~~fl~ 245 (266)
T PRK06171 213 VEQLRAGYTKTSTIPLG-----RSGKLSEVADLVCYLL 245 (266)
T ss_pred HHHHHhhhcccccccCC-----CCCCHHHhhhheeeee
Confidence 1111111111 012222 6788899999998874
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=154.63 Aligned_cols=167 Identities=20% Similarity=0.212 Sum_probs=128.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----CT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d 80 (243)
|++++||||+|+||+++++.|+++|++|++++| ++...+. +.. ...++.++++|++|.+++.+++++ +|
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r-~~~~~~~---~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d 73 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGR-NQSVLDE---LHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPE 73 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC-CHHHHHH---HHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence 478999999999999999999999999999999 5433222 211 123688999999999999999875 58
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
.+||+||.... ...+.+...+++|+.++.++++++.+.- +.+++|++||.....+.+
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----------------- 136 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP----------------- 136 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC-----------------
Confidence 89999985422 1223456789999999999999988741 135799999865432221
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHH---HcCccEEEEccCceeCCCCC
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAE---EHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~---~~gi~~~~~rp~~i~G~~~~ 200 (243)
....|+.+|.+.+.+.+.++. .+|++++++|||.++++...
T Consensus 137 -----~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~ 180 (240)
T PRK06101 137 -----RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD 180 (240)
T ss_pred -----CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence 123599999999999998874 35999999999999998543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=153.51 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=146.1
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|++.|++|++++|+.. .+....+... +.++..+++|++|.+++.++++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL---GRRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999998877332 1122222221 3467889999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... ...+++...+++|+.++.++++++... +.-.++|++||...+.+.+
T Consensus 83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 153 (253)
T PRK08993 83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI--------- 153 (253)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC---------
Confidence 47999999987532 223567789999999999998877653 2125899999976543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+-.+........ ....+.... ..+..
T Consensus 154 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--~~~~~~~~~-~~p~~- 216 (253)
T PRK08993 154 -------------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--EQRSAEILD-RIPAG- 216 (253)
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--hHHHHHHHh-cCCCC-
Confidence 1124999999999999998877 589999999999988753221111 001111111 11122
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 217 ----r~~~p~eva~~~~~l~ 232 (253)
T PRK08993 217 ----RWGLPSDLMGPVVFLA 232 (253)
T ss_pred ----CCcCHHHHHHHHHHHh
Confidence 5788899999988763
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=160.20 Aligned_cols=199 Identities=16% Similarity=0.153 Sum_probs=141.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+|+++||||+|+||+++++.|+++|++|++++| +.+..+.. ..+.. .+..+.++.+|++|.++++++++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R-~~~~l~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAAR-DEEALQAVAEECRA---LGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 44333222 22222 24467889999999999888874
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++|||||.... ...+.+...+++|+.++.++.+.+. +.+ ..+||++||...+.+.+
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p--------- 151 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQP--------- 151 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCC---------
Confidence 47999999986433 2234456789999999998877654 334 46899999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+.+.++.+ .|++++.+.||.+.++....... ..+...
T Consensus 152 -------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~---------~~~~~~--- 206 (330)
T PRK06139 152 -------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN---------YTGRRL--- 206 (330)
T ss_pred -------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc---------cccccc---
Confidence 2245999999988888877665 37999999999999985322100 001110
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.....+.+.+|+|++++++
T Consensus 207 -~~~~~~~~pe~vA~~il~~ 225 (330)
T PRK06139 207 -TPPPPVYDPRRVAKAVVRL 225 (330)
T ss_pred -cCCCCCCCHHHHHHHHHHH
Confidence 0011467888888887654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=153.92 Aligned_cols=176 Identities=18% Similarity=0.124 Sum_probs=128.7
Q ss_pred CCCCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCch--------hhchhhhhhcCCCCCCCeEEEecCCCChh
Q 026091 1 MEEEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPE--------QKRDLSFLTNLPRASERLQIFNADLNNPE 70 (243)
Q Consensus 1 m~~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~ 70 (243)
|..++|+|+||||+| +||.+++++|+++|++|++++|+..+ ..............+.+++++.+|+++.+
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 556678999999995 79999999999999999999985110 11111111111122456899999999998
Q ss_pred hHHHHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeec
Q 026091 71 SFDAAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHF 135 (243)
Q Consensus 71 ~~~~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~ 135 (243)
++..+++ .+|+|||+||.... ...+.+...+++|+.++.++++++.+.. ..+++|++||...+.+
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 8877765 36999999986433 1223455778999999999998876531 1358999999764432
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
.+ ....|+.+|.+.+.+++.++.+ ++++++.++||.+..+.
T Consensus 161 ~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~ 204 (256)
T PRK12748 161 MP----------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW 204 (256)
T ss_pred CC----------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence 21 1245999999999999988766 48999999999988764
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=156.45 Aligned_cols=198 Identities=20% Similarity=0.157 Sum_probs=135.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+|+||||+|+||+++++.|+++|++|++++| +.+..+. +.. .+++.+++|+.|.+++.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r-~~~~~~~---~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 72 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACR-KPDDVAR---MNS-----LGFTGILLDLDDPESVERAADEVIALTD 72 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHhHH---HHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999 5433222 221 257889999999988777654
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGI----LKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|.+||++|.... ...+.+...++.|+.++.++ ++.+++.+ .+++|++||...+.+.
T Consensus 73 ~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~----------- 140 (256)
T PRK08017 73 NRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST----------- 140 (256)
T ss_pred CCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC-----------
Confidence 35899999986432 12334557889999988876 55556666 6799999996443221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHH---HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE---EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|...|.+.+.++. ..+++++++|||.+.++....... ............
T Consensus 141 -----------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~~~~~~~~~ 201 (256)
T PRK08017 141 -----------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ--------TQSDKPVENPGI 201 (256)
T ss_pred -----------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc--------hhhccchhhhHH
Confidence 1234599999999998876543 358999999999887653211100 000000000111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++++|+++++..+
T Consensus 202 ~~~~~~~~~d~a~~~~~~ 219 (256)
T PRK08017 202 AARFTLGPEAVVPKLRHA 219 (256)
T ss_pred HhhcCCCHHHHHHHHHHH
Confidence 223579999999988754
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-21 Score=159.38 Aligned_cols=186 Identities=19% Similarity=0.102 Sum_probs=127.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++|+..........+... ..+.+++++++|+.|.+++.++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 4689999999999999999999999999999999433222112222211 113468899999999998888765
Q ss_pred -cccEEEEeeeccCC---CCCChHHHHHHHHHHHH----HHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI---HGKEPEEVIIQRAVSGT----IGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~---~~~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|+|||+||.... ...+.+...+++|+.++ ..+++.+++.+ .++||++||.+.+..... ..++..+.
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~---~~~~~~~~ 169 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAI---HFDDLQWE 169 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCC---CccccCcc
Confidence 47999999986533 23355667899999994 45555565555 579999999764321111 11111110
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEE--EEccCceeCCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLV--TIIPSFVTGPFIC 200 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~--~~rp~~i~G~~~~ 200 (243)
. ..++...|+.||.+.+.+.+.++.+. |++++ .+.||.+.++...
T Consensus 170 ~------~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~ 219 (306)
T PRK06197 170 R------RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR 219 (306)
T ss_pred c------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence 0 01234579999999999999988764 65554 4589999887543
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=155.35 Aligned_cols=206 Identities=18% Similarity=0.178 Sum_probs=144.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+....+. ... ..++.++++|++|.+++.++++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLER-SAEKLASLR--QRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999 443322221 111 2367899999999988888765
Q ss_pred -cccEEEEeeeccCC------CCCC----hHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCccccc
Q 026091 78 -GCTGVIHVAAPIDI------HGKE----PEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+||.... ...+ .+...+++|+.++..+++++.+.- +-.++|++||.+.+.+.+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 151 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG------- 151 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-------
Confidence 47999999996431 1112 155678899999999988876531 125899999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCC-C------CcHHHHHHHHh
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQL-A------GSVRGTLAMVM 215 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~-~------~~~~~~~~~~~ 215 (243)
....|+.+|.+.+.+++.++.+. +++++.+.||.+..+...... . ...+.......
T Consensus 152 ---------------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (263)
T PRK06200 152 ---------------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA 216 (263)
T ss_pred ---------------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhh
Confidence 22359999999999999998774 599999999999887532110 0 00010111111
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...++. .+...+|+|+++++|+
T Consensus 217 -~~~p~~-----r~~~~~eva~~~~fl~ 238 (263)
T PRK06200 217 -AITPLQ-----FAPQPEDHTGPYVLLA 238 (263)
T ss_pred -cCCCCC-----CCCCHHHHhhhhhhee
Confidence 112222 6788999999998874
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=154.47 Aligned_cols=206 Identities=16% Similarity=0.186 Sum_probs=142.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|....++++||||+|+||+++++.|+++|++|++++|+..........+.. .+.++.++++|+++.+++.++++
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA---LGTEVRGYAANVTDEEDVEATFAQIA 77 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 555678999999999999999999999999999999843322222222221 24468899999999988877665
Q ss_pred ----cccEEEEeeeccCC--------------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeec
Q 026091 78 ----GCTGVIHVAAPIDI--------------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHF 135 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~--------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~ 135 (243)
.+|+|||+||.... .+.+.+...+++|+.++..+.+.+.+ ...-.+++++||.+.+ +
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~ 156 (253)
T PRK08217 78 EDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-G 156 (253)
T ss_pred HHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-C
Confidence 36999999985331 11234556788999999877664443 2213478999886533 2
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHH
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLA 212 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~ 212 (243)
.+ +...|+.+|.+.+.+++.++.+ ++++++.++|+.+.++...... +....
T Consensus 157 ~~----------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~----~~~~~ 210 (253)
T PRK08217 157 NM----------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK----PEALE 210 (253)
T ss_pred CC----------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC----HHHHH
Confidence 11 2245999999999999998865 5899999999999988543221 11111
Q ss_pred HHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 213 MVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 213 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.... ..++. .+.+++|+|+++.++
T Consensus 211 ~~~~-~~~~~-----~~~~~~~~a~~~~~l 234 (253)
T PRK08217 211 RLEK-MIPVG-----RLGEPEEIAHTVRFI 234 (253)
T ss_pred HHHh-cCCcC-----CCcCHHHHHHHHHHH
Confidence 1111 11222 578999999998875
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=153.74 Aligned_cols=210 Identities=19% Similarity=0.141 Sum_probs=142.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+..... ..+... ..+.++..+.+|++|.+++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGR-DEERLASAEARLREK-FPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999 44322221 112111 112367889999999998887765
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... ...+.+...+++|+.+...+.+.+.+ .+ .++||++||.....+.+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 154 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEP--------- 154 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCC---------
Confidence 36999999986432 22345667888898887777665443 34 46999999976432221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC------CcHHHHHHHH-hc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA------GSVRGTLAMV-MG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~------~~~~~~~~~~-~~ 216 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+..+....... .......+.. ..
T Consensus 155 -------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
T PRK07062 155 -------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARK 221 (265)
T ss_pred -------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhc
Confidence 1235999999999999888766 48999999999998874321100 0011111111 11
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...+.. .+...+|+|+++++++
T Consensus 222 ~~~p~~-----r~~~p~~va~~~~~L~ 243 (265)
T PRK07062 222 KGIPLG-----RLGRPDEAARALFFLA 243 (265)
T ss_pred CCCCcC-----CCCCHHHHHHHHHHHh
Confidence 111222 5778999999988763
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-21 Score=157.48 Aligned_cols=207 Identities=18% Similarity=0.125 Sum_probs=145.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||+++++.|++.|++|++++| +........ .... ....+..+++|++|.+++.++++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~l~~~~--~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDL-EEAELAALA--AELG-GDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 543322211 1111 13356677899999998888765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
.+|+|||+||.... ...+.+...+++|+.++.++++.+.+.- ...+||++||.+.+.+.+
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 151 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP------------ 151 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC------------
Confidence 47999999997433 2234566789999999999998876531 135899999976543321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+ +|++++++.||.+.++........ ...........+.+..
T Consensus 152 ----------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~p~~---- 216 (296)
T PRK05872 152 ----------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPWPLR---- 216 (296)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCCccc----
Confidence 2245999999999999988754 589999999999988753322111 0111111111111222
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.++..+|+|++++++
T Consensus 217 -~~~~~~~va~~i~~~ 231 (296)
T PRK05872 217 -RTTSVEKCAAAFVDG 231 (296)
T ss_pred -CCCCHHHHHHHHHHH
Confidence 578899999998765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-21 Score=152.50 Aligned_cols=207 Identities=17% Similarity=0.115 Sum_probs=142.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|+.|+++.|+...... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK---AGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999988884432221 1111211 23467889999999998888765
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+|+.... ...+.+...+++|+.++..+.+. +++.+.-+++|++||...+.+.
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~---------- 152 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW---------- 152 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC----------
Confidence 47999999986443 12344567789998888766554 4444323589999996533221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++........ ........ ...++.
T Consensus 153 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~-~~~~~~- 216 (261)
T PRK08936 153 ------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD--PKQRADVE-SMIPMG- 216 (261)
T ss_pred ------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC--HHHHHHHH-hcCCCC-
Confidence 123469999999998888887654 89999999999998864322211 11111111 111222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+++++.+++
T Consensus 217 ----~~~~~~~va~~~~~l~ 232 (261)
T PRK08936 217 ----YIGKPEEIAAVAAWLA 232 (261)
T ss_pred ----CCcCHHHHHHHHHHHc
Confidence 5778899999988763
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=151.93 Aligned_cols=201 Identities=18% Similarity=0.165 Sum_probs=142.6
Q ss_pred EEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---ccEEEE
Q 026091 9 CVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG---CTGVIH 84 (243)
Q Consensus 9 lvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vi~ 84 (243)
+||||+|+||++++++|+++|++|++++| ++...... ..+. .+.+++++.+|++|.+++.++++. +|.+||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASR-SRDRLAAAARALG----GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 59999999999999999999999999999 44322211 1111 134688999999999999999874 799999
Q ss_pred eeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 85 VAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 85 ~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
++|.... ...+.+...+++|+.++.+++++....+ .++||++||.+++... +
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~----------------------~ 132 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPS----------------------A 132 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCC----------------------C
Confidence 9986433 1234567889999999999999655444 6799999997755332 1
Q ss_pred CCchHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHh
Q 026091 160 WGKSYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 238 (243)
+.+.|+.+|.+.+.+.+.++.+. +++++.++|+.+-++.................. ...+.. .+...+|+|++
T Consensus 133 ~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~dva~~ 206 (230)
T PRK07041 133 SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAA-ERLPAR-----RVGQPEDVANA 206 (230)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHH-hcCCCC-----CCcCHHHHHHH
Confidence 33569999999999999998774 699999999998776432111111111111111 111111 45678999999
Q ss_pred hhccC
Q 026091 239 HIFFT 243 (243)
Q Consensus 239 ~~~~~ 243 (243)
+++++
T Consensus 207 ~~~l~ 211 (230)
T PRK07041 207 ILFLA 211 (230)
T ss_pred HHHHh
Confidence 88753
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=151.30 Aligned_cols=204 Identities=17% Similarity=0.129 Sum_probs=144.3
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+ +.||++++++|++.|++|++..|+ ........ +.. ...+.++++|++|.++++++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~---~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQ---KLV--DEEDLLVECDVASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHH---hhc--cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence 46899999999 799999999999999999999884 32222222 211 2367889999999988887765
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+||.... .+.+++...+++|+.++..+.+++.+.- +-.++|++||.+.....
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-------- 151 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI-------- 151 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC--------
Confidence 37999999986431 2334567788999999999988877642 12589999986532111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-++....... -....+.... ..+.
T Consensus 152 --------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--~~~~~~~~~~-~~p~ 214 (252)
T PRK06079 152 --------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--HKDLLKESDS-RTVD 214 (252)
T ss_pred --------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--hHHHHHHHHh-cCcc
Confidence 01245999999999999999876 48999999999998874322111 1111111111 1122
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++.+++
T Consensus 215 ~-----r~~~pedva~~~~~l~ 231 (252)
T PRK06079 215 G-----VGVTIEEVGNTAAFLL 231 (252)
T ss_pred c-----CCCCHHHHHHHHHHHh
Confidence 2 5788999999998764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-21 Score=150.94 Aligned_cols=200 Identities=18% Similarity=0.202 Sum_probs=141.7
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-------cc
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-------CT 80 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~d 80 (243)
|+|||++|+||++++++|+++|++|++++|+......... ......+.++.++.+|++|.+++.+++++ +|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV--EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH--HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999995432221111 11111234688999999999998888754 69
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+|||++|.... ...+.+...++.|+.++.++++.+.+. + .++|+++||.+.+++.+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~-------------- 143 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNA-------------- 143 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCC--------------
Confidence 99999997532 223455678899999999999988753 3 56999999976554332
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
....|+.+|.+.+.+.+.++++ .|+++++++|+.+.++...... ........+ ..++. .
T Consensus 144 --------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~----~~~~~~~~~-~~~~~-----~ 205 (239)
T TIGR01830 144 --------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS----EKVKKKILS-QIPLG-----R 205 (239)
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC----hHHHHHHHh-cCCcC-----C
Confidence 1245999999999998888765 4899999999998776432211 111111111 11222 5
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
+.+++|++++++++
T Consensus 206 ~~~~~~~a~~~~~~ 219 (239)
T TIGR01830 206 FGTPEEVANAVAFL 219 (239)
T ss_pred CcCHHHHHHHHHHH
Confidence 77899999988754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-21 Score=153.80 Aligned_cols=171 Identities=18% Similarity=0.242 Sum_probs=124.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch---hhhh-hcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD---LSFL-TNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
.++|+++||||+|+||+++++.|+++|++|++++|+.+..... +..+ .+....+.++.++.+|+++.+++.++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 3468999999999999999999999999999999954321110 1111 1111124468899999999998888776
Q ss_pred ------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccc
Q 026091 78 ------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+++...+++|+.++.++++++...- .-.+++++||.......
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 156 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK------- 156 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc-------
Confidence 57999999986432 2224456788899999999999887531 13578888875321110
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSF 193 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~ 193 (243)
+ .++...|+.+|.+.|.+++.++.+. +++++.+.|+.
T Consensus 157 ----~---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 157 ----W---------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred ----c---------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 0 0123469999999999999998774 89999999984
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.6e-21 Score=150.20 Aligned_cols=197 Identities=16% Similarity=0.082 Sum_probs=138.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|+..... ..+.. .+++++.+|+.|.+++.++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 579999999999999999999999999999999443221 22222 146789999999988887765
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CC--ccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GT--VKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++..+.+.+.+. .. ..++|++||.....+.+
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------- 143 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD---------- 143 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC----------
Confidence 37999999986432 123557788999999998877766553 10 25899999864321111
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+++.++.+. +++++.++||.+..+... .. ......... .++.
T Consensus 144 ------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~--~~~~~~~~~--~~~~--- 201 (236)
T PRK06483 144 ------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DA--AYRQKALAK--SLLK--- 201 (236)
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CH--HHHHHHhcc--Cccc---
Confidence 12359999999999999999875 699999999998643211 00 111111111 1222
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+++
T Consensus 202 --~~~~~~~va~~~~~l~ 217 (236)
T PRK06483 202 --IEPGEEEIIDLVDYLL 217 (236)
T ss_pred --cCCCHHHHHHHHHHHh
Confidence 4567899999998763
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=151.18 Aligned_cols=170 Identities=14% Similarity=0.155 Sum_probs=122.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.++|+||||+|+||++++++|+++| ++|++++|+.....+ ....+... ...+++++.+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA--GASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc--CCCceEEEEecCCChHHHHHHHHHHHh
Confidence 45789999999999999999999995 999999994432121 12222221 12368999999999988666554
Q ss_pred --cccEEEEeeeccCCC---CCC--hHHHHHHHHHHHHHH----HHHHHHhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDIH---GKE--PEEVIIQRAVSGTIG----ILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~---~~~--~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||++|..... ..+ +..+.+++|+.++.. +++.+++.+ .++||++||.....+.
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~---------- 153 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR---------- 153 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC----------
Confidence 589999999875431 111 122468999988876 455666666 6899999997532211
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
++...|+.||.+...+.+.++.+ +|+++++++||.+..+.
T Consensus 154 ------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~ 196 (253)
T PRK07904 154 ------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM 196 (253)
T ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecch
Confidence 12235999999998877776544 58999999999999873
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-21 Score=173.09 Aligned_cols=209 Identities=22% Similarity=0.197 Sum_probs=145.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||+++++.|+++|++|++++| +......... ..... .++.++.+|++|.+++.++++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r-~~~~~~~~~~--~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADL-DEEAAEAAAA--ELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHH--HHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999999999999 4433222211 11111 478899999999998888775
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++.+.+ .+.-++||++||..++.+.+
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~----------- 566 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP----------- 566 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC-----------
Confidence 57999999996443 23345667889999999999776653 33116899999976543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCcee-CCCCCCCCCCcHHHHHHHHhcCcc-----
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVT-GPFICPQLAGSVRGTLAMVMGNRE----- 219 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~-G~~~~~~~~~~~~~~~~~~~~~~~----- 219 (243)
....|+.+|.+.+.+++.++.+. |++++.++|+.+| +...... .+.... ....+...
T Consensus 567 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~--~~~~~~-~~~~g~~~~~~~~ 632 (681)
T PRK08324 567 -----------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG--EWIEAR-AAAYGLSEEELEE 632 (681)
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc--hhhhhh-hhhccCChHHHHH
Confidence 22459999999999999998764 6999999999998 5432111 000000 00001000
Q ss_pred ccc-cccCcCceeHHHHHHhhhcc
Q 026091 220 EYS-MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~-~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+. ....+.+++++|+|++++++
T Consensus 633 ~~~~~~~l~~~v~~~DvA~a~~~l 656 (681)
T PRK08324 633 FYRARNLLKREVTPEDVAEAVVFL 656 (681)
T ss_pred HHHhcCCcCCccCHHHHHHHHHHH
Confidence 011 12344899999999999875
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.3e-21 Score=152.98 Aligned_cols=172 Identities=22% Similarity=0.191 Sum_probs=129.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++++++||||+|+||++++++|+++|++|++++| +......... +. ....+++++.+|++|.+++.++++
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~ 76 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGR-NAEKLEALAA--RL-PYPGRHRWVVADLTSEAGREAVLARAR 76 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--HH-hcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 5666789999999999999999999999999999999 4433222211 11 123578999999999998887765
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|+|||+||.... .+.+.+...+++|+.++.++++.+.+. ...++++++||.....+.+
T Consensus 77 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 147 (263)
T PRK09072 77 EMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP--------- 147 (263)
T ss_pred hcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC---------
Confidence 47999999986432 122345678889999999998887653 1146899998865432221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+++.++.+ ++++++.+.||.+.++.
T Consensus 148 -------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~ 189 (263)
T PRK09072 148 -------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM 189 (263)
T ss_pred -------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence 1245999999999999888766 47999999999997764
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-21 Score=152.24 Aligned_cols=207 Identities=17% Similarity=0.177 Sum_probs=141.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
|+++||||+|+||.+++++|++.|++|+++.|+..........+.. .+..+.++.+|++|++++.++++ .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ---AGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999943222222222221 23468899999999999888765 3
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|+|||+|+.... .+.+.+...+++|+.++..+++.+.+ .+..+++|++||.....+.+
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 145 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------ 145 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------
Confidence 6999999986432 22344557899999999887766544 23136899999966543331
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC-------cHHHHHHHHhcCcc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG-------SVRGTLAMVMGNRE 219 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~-------~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+++.++.+. ++++++++||.+.++........ .......... ...
T Consensus 146 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 214 (254)
T TIGR02415 146 ----------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS-SEI 214 (254)
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH-hhC
Confidence 12459999999999999887664 79999999999977642211000 0000000000 011
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ..+..++|+++++.+++
T Consensus 215 ~~-----~~~~~~~~~a~~~~~l~ 233 (254)
T TIGR02415 215 AL-----GRPSEPEDVAGLVSFLA 233 (254)
T ss_pred CC-----CCCCCHHHHHHHHHhhc
Confidence 11 15788999999998764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-21 Score=153.74 Aligned_cols=167 Identities=17% Similarity=0.180 Sum_probs=122.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC----- 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----- 79 (243)
||+++||||+|+||++++++|+++|++|++++|+..... ..+.. ....+++++++|++|.+++.++++++
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKEL---TKLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHH---HHHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999432222 11111 12347889999999999998887642
Q ss_pred ------cEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccc
Q 026091 80 ------TGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 80 ------d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
..+||+||.... .+.+.+...+++|+.++..+++.+.+. +..++||++||..+....
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 148 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY------- 148 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC-------
Confidence 178999986432 233456677888988877766655432 214589999996543221
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCC
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~ 198 (243)
++...|+.+|.+.+.+++.++.+ ++++++.++||.+-++.
T Consensus 149 ---------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 193 (251)
T PRK06924 149 ---------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM 193 (251)
T ss_pred ---------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence 13356999999999999988765 37999999999987764
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=152.90 Aligned_cols=209 Identities=14% Similarity=0.131 Sum_probs=144.1
Q ss_pred CCCCCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 1 MEEEKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 1 m~~~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
|....|+++||||+ +.||++++++|++.|++|++..| +....+.+..+.... +.. ..+++|++|.++++++++
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r-~~~~~~~~~~~~~~~--~~~-~~~~~Dv~d~~~v~~~~~~ 76 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYL-NEALKKRVEPIAQEL--GSD-YVYELDVSKPEHFKSLAES 76 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHhc--CCc-eEEEecCCCHHHHHHHHHH
Confidence 66667999999997 79999999999999999999988 432222222222110 123 678999999998888875
Q ss_pred ------cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcc
Q 026091 78 ------GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+.+.+.- .-++||++||.+...+.+
T Consensus 77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~---- 152 (274)
T PRK08415 77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP---- 152 (274)
T ss_pred HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC----
Confidence 37999999996421 2335577889999999999988776642 125899999865332111
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR 218 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+..... .. ...... .....
T Consensus 153 ------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~~~-~~~~~ 211 (274)
T PRK08415 153 ------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GD-FRMILK-WNEIN 211 (274)
T ss_pred ------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-ch-hhHHhh-hhhhh
Confidence 1235999999999999999876 489999999999988632211 00 000000 00111
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.. .+...+|+|+++++++
T Consensus 212 ~pl~-----r~~~pedva~~v~fL~ 231 (274)
T PRK08415 212 APLK-----KNVSIEEVGNSGMYLL 231 (274)
T ss_pred Cchh-----ccCCHHHHHHHHHHHh
Confidence 1222 5688999999998763
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=151.54 Aligned_cols=206 Identities=14% Similarity=0.083 Sum_probs=142.4
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||++ .||++++++|++.|++|++..| +....+....+... ......+++|++|.++++++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r-~~~~~~~~~~~~~~---~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ-GEALGKRVKPLAES---LGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC-chHHHHHHHHHHHh---cCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 458999999997 9999999999999999999888 43222222222211 1123578999999998888875
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++|||||.... .+.+.+...+++|+.++.++.+++.+.- .-.+||++||.+.....+
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~------- 154 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP------- 154 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC-------
Confidence 47999999986421 2345677888999999999888766532 125899999875432211
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+..... .. ......... ...++
T Consensus 155 ---------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~-~~~~~~~~~-~~~p~ 216 (271)
T PRK06505 155 ---------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GD-ARAIFSYQQ-RNSPL 216 (271)
T ss_pred ---------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cc-hHHHHHHHh-hcCCc
Confidence 1235999999999999999877 489999999999988743211 11 011111111 11122
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++++|+
T Consensus 217 ~-----r~~~peeva~~~~fL~ 233 (271)
T PRK06505 217 R-----RTVTIDEVGGSALYLL 233 (271)
T ss_pred c-----ccCCHHHHHHHHHHHh
Confidence 2 4678899999998864
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=149.42 Aligned_cols=202 Identities=19% Similarity=0.236 Sum_probs=138.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
|++|||||+|+||++++++|+++|++|+++.|+++...... .......+.++.++.+|++|++++.++++ .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAW--LQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH--HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999988333221111 11111123478899999999988877765 3
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|.|||+||.... ...+++...++.|+.++..+.+. +++.+ .++++++||.....+..
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~------------ 145 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF------------ 145 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC------------
Confidence 7999999986432 22345567788999998886554 44455 67999999965432221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+++.++++ +|++++.++|+.+.++........ ........ ....
T Consensus 146 ----------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~-~~~~---- 206 (242)
T TIGR01829 146 ----------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRED----VLNSIVAQ-IPVG---- 206 (242)
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchH----HHHHHHhc-CCCC----
Confidence 1235999999999998888765 489999999999998854322111 11111111 1122
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+++++.++
T Consensus 207 -~~~~~~~~a~~~~~l 221 (242)
T TIGR01829 207 -RLGRPEEIAAAVAFL 221 (242)
T ss_pred -CCcCHHHHHHHHHHH
Confidence 456678888887665
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=149.71 Aligned_cols=208 Identities=18% Similarity=0.153 Sum_probs=143.9
Q ss_pred CCCeEEEecCch-hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTG-FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+| .||+++++.|+++|++|++++|+..........+... ....++.++++|+++.+++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE-LGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-cCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 358999999997 7999999999999999999888432211111212110 012368899999999998888775
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... .+.+.+...+++|+.++..+++.+.+. +.-.+++++||.......
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------- 164 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---------- 164 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------
Confidence 46999999986432 223456678889999999988876542 112578888886533221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+..+....... ....+..... ..+.
T Consensus 165 ------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~---~~~~~~~~~~-~~~~- 227 (262)
T PRK07831 165 ------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS---AELLDELAAR-EAFG- 227 (262)
T ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC---HHHHHHHHhc-CCCC-
Confidence 12245999999999999999876 58999999999999985332111 1111112111 1232
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 228 ----r~~~p~~va~~~~~l~ 243 (262)
T PRK07831 228 ----RAAEPWEVANVIAFLA 243 (262)
T ss_pred ----CCcCHHHHHHHHHHHc
Confidence 6788899999998764
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=150.92 Aligned_cols=207 Identities=15% Similarity=0.121 Sum_probs=140.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+++||+++++.|++.|++|+++.|++.+..+.. ..+.. ..+.++.++.+|++|++++.++++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQ--KYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999988877444322221 11111 123478899999999998888776
Q ss_pred --cccEEEEeeeccCC-----------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCc
Q 026091 78 --GCTGVIHVAAPIDI-----------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
++|++||+||.... ...+.+...+++|+.+...+.+.+.+ .+ .++||++||.+.....+
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--- 160 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIE--- 160 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCC---
Confidence 37999999985321 11234556788888877766555443 33 46899999965332211
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
....|+.+|.+.+.+.+.++.+. |++++.+.||.+-.+...... .. .........
T Consensus 161 -------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~-~~-~~~~~~~~~- 218 (260)
T PRK08416 161 -------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT-NY-EEVKAKTEE- 218 (260)
T ss_pred -------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc-CC-HHHHHHHHh-
Confidence 11359999999999999998874 899999999999776422111 11 111111111
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+.. .+..++|+|+++++++
T Consensus 219 ~~~~~-----r~~~p~~va~~~~~l~ 239 (260)
T PRK08416 219 LSPLN-----RMGQPEDLAGACLFLC 239 (260)
T ss_pred cCCCC-----CCCCHHHHHHHHHHHc
Confidence 11122 5788999999988763
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=166.06 Aligned_cols=205 Identities=19% Similarity=0.216 Sum_probs=146.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
..|+++||||+|+||++++++|+++|++|++++| +......+.. .. +.++..+.+|++|++++.++++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR-DAEGAKKLAE--AL---GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999999999 4433222221 11 2466789999999998888875
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
.+|++|||||.... .+.+.+...+++|+.++.++.+.+.+.- ...+||++||.+...+.+
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 409 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP------------ 409 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC------------
Confidence 37999999996421 2234567889999999999999877652 136899999976543321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++.........-.. ..... ...++.
T Consensus 410 ----------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~-~~~~~~---- 473 (520)
T PRK06484 410 ----------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRAD-FDSIR-RRIPLG---- 473 (520)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHH-HHHHH-hcCCCC----
Confidence 22459999999999999988764 899999999999987532211100000 11111 111222
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
.+..++|+|+++++++
T Consensus 474 -~~~~~~dia~~~~~l~ 489 (520)
T PRK06484 474 -RLGDPEEVAEAIAFLA 489 (520)
T ss_pred -CCcCHHHHHHHHHHHh
Confidence 5678999999988763
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=153.79 Aligned_cols=170 Identities=17% Similarity=0.184 Sum_probs=127.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||+++++.|+++|++|++++| +.+..+.. ..+.. .+.++.++.+|+.|.+++.++++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R-~~~~l~~~~~~l~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVAR-REDLLDAVADRITR---AGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 44332222 11111 13467899999999999888877
Q ss_pred --cccEEEEeeeccCCCC-------CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDIHG-------KEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||...... .+.+...+++|+.++.++++++. +.+ .+++|++||.+++....
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 186 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEAS------- 186 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC-------
Confidence 5899999998754311 12345688899999888877654 445 67999999965432110
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
+....|+.+|.+.+.+++.++.+ +|++++.++||.+-++..
T Consensus 187 --------------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~ 230 (293)
T PRK05866 187 --------------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI 230 (293)
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence 12245999999999999988766 389999999999877643
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=156.80 Aligned_cols=172 Identities=18% Similarity=0.166 Sum_probs=119.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh------cc-c
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI------AG-C 79 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------~~-~ 79 (243)
+|+||||||++|++++++|+++|++|.+++| +++... ..+++.+.+|+.|++++.+++ ++ +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R-~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~ 68 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASR-SSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI 68 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeC-CCcccc-----------CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence 5999999999999999999999999999999 443221 125677889999999999998 56 9
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|.|+|+++... +. .....+++++|++.| ++|||++||..+..+.
T Consensus 69 d~v~~~~~~~~----~~--------~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~----------------------- 112 (285)
T TIGR03649 69 SAVYLVAPPIP----DL--------APPMIKFIDFARSKG-VRRFVLLSASIIEKGG----------------------- 112 (285)
T ss_pred eEEEEeCCCCC----Ch--------hHHHHHHHHHHHHcC-CCEEEEeeccccCCCC-----------------------
Confidence 99999876421 11 123468899999999 9999999986432110
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc-cccc-cccCcCceeHHHHHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR-EEYS-MLLNISMVHIDDVAR 237 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~Dva~ 237 (243)
..+...|.++++ ..|++++++||++++++...... . ....... .... +++.++|+|++|+|+
T Consensus 113 ------~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~~---~----~~~~~~~~~~~~~g~~~~~~v~~~Dva~ 176 (285)
T TIGR03649 113 ------PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEFH---V----EAIRKENKIYSATGDGKIPFVSADDIAR 176 (285)
T ss_pred ------chHHHHHHHHHh---ccCCCEEEEeccHHhhhhccccc---c----cccccCCeEEecCCCCccCcccHHHHHH
Confidence 011223443332 14999999999999976421110 0 1111112 2212 367789999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
++..+
T Consensus 177 ~~~~~ 181 (285)
T TIGR03649 177 VAYRA 181 (285)
T ss_pred HHHHH
Confidence 97754
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=148.68 Aligned_cols=172 Identities=18% Similarity=0.188 Sum_probs=127.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 78 (243)
|..++|+|+||||+|+||+++++.|++.|++|++++| ++.....+ ..+.. ..+++++++|+.+.+++.+++++
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 75 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR-NENKLKRMKKTLSK----YGNIHYVVGDVSSTESARNVIEKA 75 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh----cCCeEEEECCCCCHHHHHHHHHHH
Confidence 5556789999999999999999999999999999999 44333222 22211 23688999999999988877653
Q ss_pred ------ccEEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 ------CTGVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 ------~d~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|.++|+++.... ...+.+...++.|+.++..+++...+.- .-.++|++||........
T Consensus 76 ~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------- 144 (238)
T PRK05786 76 AKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS----------- 144 (238)
T ss_pred HHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC-----------
Confidence 5999999975432 1113345678889999888888776641 125799999865321110
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPF 198 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~ 198 (243)
++...|+.+|.+.+.+++.++.+. |++++++||++++++.
T Consensus 145 ----------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 145 ----------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 122459999999999988887663 8999999999999974
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=148.97 Aligned_cols=199 Identities=17% Similarity=0.201 Sum_probs=141.6
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------cc
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-------GC 79 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~ 79 (243)
|+||||+|+||.++++.|+++|++|+++.|+....... ...+.. .+.+++++++|++|.+++.++++ .+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA---QGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999998844332222 122222 23468999999999998888765 36
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL-----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
|.+||++|.... ...+++...++.|+.++.++++++. +.+ .+++|++||.+.+.+.+
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~------------ 144 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNR------------ 144 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCC------------
Confidence 999999986432 2334566789999999999988652 233 46899999976554432
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++..... ........ . ..++.
T Consensus 145 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~-~-~~~~~---- 204 (239)
T TIGR01831 145 ----------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEAL-K-TVPMN---- 204 (239)
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHH-h-cCCCC----
Confidence 1235999999999988888766 489999999999988754322 11111111 1 11222
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+++++.+++
T Consensus 205 -~~~~~~~va~~~~~l~ 220 (239)
T TIGR01831 205 -RMGQPAEVASLAGFLM 220 (239)
T ss_pred -CCCCHHHHHHHHHHHc
Confidence 5678899999988863
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.6e-22 Score=154.04 Aligned_cols=196 Identities=20% Similarity=0.152 Sum_probs=147.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
-.+-|.|||||+|+++|++|.+.|.+|++--|-++.....++-..++ +.+-++..|+.|+++++++++...+|||+
T Consensus 62 iVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL----GQvl~~~fd~~DedSIr~vvk~sNVVINL 137 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL----GQVLFMKFDLRDEDSIRAVVKHSNVVINL 137 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc----cceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence 46789999999999999999999999999999766555444444443 46789999999999999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
.|---. ...+ .+.+.|..++..|.+.|++.| +.+|||+|+...-.. -.+-|-
T Consensus 138 IGrd~e--Tknf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~------------------------s~Sr~L 189 (391)
T KOG2865|consen 138 IGRDYE--TKNF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVK------------------------SPSRML 189 (391)
T ss_pred eccccc--cCCc-ccccccchHHHHHHHHHHhhC-hhheeehhhcccccc------------------------ChHHHH
Confidence 875322 2333 678899999999999999999 999999998652111 114599
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh--cCcccccc--ccCcCceeHHHHHHhhhc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM--GNREEYSM--LLNISMVHIDDVARAHIF 241 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~i~v~Dva~a~~~ 241 (243)
.+|.++|..+++-.- +.+|+||..|||.... +++.....+. +--+.+.. ...-.+|+|-|+|.+++.
T Consensus 190 rsK~~gE~aVrdafP----eAtIirPa~iyG~eDr-----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~Ivn 260 (391)
T KOG2865|consen 190 RSKAAGEEAVRDAFP----EATIIRPADIYGTEDR-----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVN 260 (391)
T ss_pred HhhhhhHHHHHhhCC----cceeechhhhcccchh-----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHH
Confidence 999999999998442 4899999999997432 1222222221 11111221 234589999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 261 A 261 (391)
T KOG2865|consen 261 A 261 (391)
T ss_pred h
Confidence 5
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-21 Score=171.00 Aligned_cols=151 Identities=18% Similarity=0.210 Sum_probs=113.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
.||||||||+||||++|+++|.++|++|.. . .+|++|.+.+...++ ++|+|
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--~-------------------------~~~l~d~~~v~~~i~~~~pd~V 432 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--G-------------------------KGRLEDRSSLLADIRNVKPTHV 432 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe--e-------------------------ccccccHHHHHHHHHhhCCCEE
Confidence 468999999999999999999999988731 1 135678888888876 68999
Q ss_pred EEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCC----CCcccccCCCCCchhhh
Q 026091 83 IHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSG----KDVDMLDETFWSDVDYI 154 (243)
Q Consensus 83 i~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~----~~~~~~~e~~~~~~~~~ 154 (243)
||+|+.... .+.......+++|+.++.+++++|++.+ + +++++||.++|.+.. ....+++|++++
T Consensus 433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~----- 505 (668)
T PLN02260 433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP----- 505 (668)
T ss_pred EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCCC-----
Confidence 999997642 1122345899999999999999999999 7 577888877664321 112356666532
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCC
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGP 197 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~ 197 (243)
.++.++|+.+|.++|.+++.+. +..++|+.++||.
T Consensus 506 ---~~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~ 540 (668)
T PLN02260 506 ---NFTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISS 540 (668)
T ss_pred ---CCCCChhhHHHHHHHHHHHhhh-----hheEEEEEEeccc
Confidence 2345789999999999998864 3667777777764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=147.26 Aligned_cols=174 Identities=13% Similarity=0.140 Sum_probs=123.4
Q ss_pred CCC-CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHh-
Q 026091 1 MEE-EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAI- 76 (243)
Q Consensus 1 m~~-~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~- 76 (243)
|+. ++|+++||||+|+||+++++.|+++|++|++++|+..........+... ......++.+|+.+ .+++.+++
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA--GHPEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc--CCCCcceEEeeecccchHHHHHHHH
Confidence 443 3589999999999999999999999999999999443222221222111 12356788899975 33444433
Q ss_pred -------ccccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCC
Q 026091 77 -------AGCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKD 139 (243)
Q Consensus 77 -------~~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~ 139 (243)
.++|.|||+||.... ...+.+...+++|+.++.++++.+.+. + ..+++++||.....+.
T Consensus 79 ~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~--- 154 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPK--- 154 (239)
T ss_pred HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCC---
Confidence 357999999996421 122345567899999999988877553 3 4689999986432111
Q ss_pred cccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc----CccEEEEccCceeCCCC
Q 026091 140 VDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH----GLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 140 ~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----gi~~~~~rp~~i~G~~~ 199 (243)
+....|+.+|.+.+.+++.++.+. +++++.++||.++++..
T Consensus 155 -------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 155 -------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred -------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 112359999999999999988774 59999999999999853
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-20 Score=150.46 Aligned_cols=225 Identities=20% Similarity=0.183 Sum_probs=143.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++|||| |+||++++++|. +|++|++++| +...... ...+.. .+.++.++++|++|.+++.++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g 75 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY-NEENLEAAAKTLRE---AGFDVSTQEVDVSSRESVKALAATAQTLG 75 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHhcC
Confidence 578999997 799999999996 7999999999 4432221 122211 23468899999999998888875
Q ss_pred cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCC---cccccCCCCCchhh
Q 026091 78 GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKD---VDMLDETFWSDVDY 153 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~---~~~~~e~~~~~~~~ 153 (243)
.+|++||+||.... .+++...+++|+.++.++++.+.+.- .-+++|++||.+........ ..........+...
T Consensus 76 ~id~li~nAG~~~~--~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (275)
T PRK06940 76 PVTGLVHTAGVSPS--QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLS 153 (275)
T ss_pred CCCEEEECCCcCCc--hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccc
Confidence 48999999997532 25577899999999999999877641 12467888876544221000 00000000000000
Q ss_pred hh---h--cCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 154 IR---K--LDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 154 ~~---~--~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
.+ + ..++...|+.||.+.+.+.+.++.+ +|++++.+.||.+.++................... ..+..
T Consensus 154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~p~~--- 229 (275)
T PRK06940 154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA-KSPAG--- 229 (275)
T ss_pred cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh-hCCcc---
Confidence 00 0 0012346999999999999988766 48999999999998875322111100011111111 11222
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++++
T Consensus 230 --r~~~peeia~~~~fL~ 245 (275)
T PRK06940 230 --RPGTPDEIAALAEFLM 245 (275)
T ss_pred --cCCCHHHHHHHHHHHc
Confidence 5789999999988764
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-20 Score=147.75 Aligned_cols=204 Identities=17% Similarity=0.092 Sum_probs=136.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
|+++||||+|.||++++++|+++|++|++++| ++.... ....+.. ..++.++++|++|.+++.++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~----~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSR-NEENLEKALKELKE----YGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh----cCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 37999999999999999999999999999999 443221 1222211 1367899999999998888875
Q ss_pred cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHH----HHh-cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKS----CLK-SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~----~~~-~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... ...+++...+..|+.++..+... +.+ .+ .++||++||.++....
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~~~--------- 145 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKEPM--------- 145 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCCCC---------
Confidence 47999999986421 11233445567787766555433 322 23 4689999997643221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC-------cHHH-HHHHH
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG-------SVRG-TLAMV 214 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~-------~~~~-~~~~~ 214 (243)
++...|+.+|.+.+.+.+.++.+. |++++.+.||.+-.+........ .... ..+..
T Consensus 146 -------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
T PRK08340 146 -------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREV 212 (259)
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHH
Confidence 122459999999999999998874 79999999999988743211000 0000 00111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ..+.. .+...+|+|+++.+|+
T Consensus 213 ~~-~~p~~-----r~~~p~dva~~~~fL~ 235 (259)
T PRK08340 213 LE-RTPLK-----RTGRWEELGSLIAFLL 235 (259)
T ss_pred hc-cCCcc-----CCCCHHHHHHHHHHHc
Confidence 11 11122 5788999999998874
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=153.59 Aligned_cols=184 Identities=20% Similarity=0.144 Sum_probs=133.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..........+... ..+.++.++.+|+.|.+++.++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA-VPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999433222222222221 113468899999999998888875
Q ss_pred -cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHh---cCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLK---SGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
.+|++||+||.... .+.+.+...+++|+.++..+.+.+.+ .+ ..++|++||.+...+.. ....+.+...
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~-~~~~~~~~~~- 168 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAI-NWDDLNWERS- 168 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCc-Cccccccccc-
Confidence 37999999997543 24466778999999998888777664 23 36899999976543321 1111111111
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~ 199 (243)
.++...|+.||.+.+.+.++++++ +|++++.+.||.+..+..
T Consensus 169 --------~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 169 --------YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred --------CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 123356999999999999998764 479999999999987643
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-20 Score=147.48 Aligned_cols=208 Identities=13% Similarity=0.081 Sum_probs=142.3
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||+ +.||++++++|++.|++|+++.|+ .+..+.+..+.... .+.++.++++|++|.++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG-ERLEKEVRELADTL-EGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc-ccchHHHHHHHHHc-CCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999997 899999999999999999998873 22222233332211 13468899999999998888775
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++|||||.... .+.+.+...+++|+.++..+.+.+.+.- +-.+||++||.....+.+
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------- 156 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ------- 156 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC-------
Confidence 37999999986421 1233456678889999888887766542 125899999975432111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+.++..... ... ......... ..+.
T Consensus 157 ---------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~p~ 218 (257)
T PRK08594 157 ---------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GGF-NSILKEIEE-RAPL 218 (257)
T ss_pred ---------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-ccc-cHHHHHHhh-cCCc
Confidence 1235999999999999998876 489999999999988632111 000 000111111 1112
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++++++
T Consensus 219 ~-----r~~~p~~va~~~~~l~ 235 (257)
T PRK08594 219 R-----RTTTQEEVGDTAAFLF 235 (257)
T ss_pred c-----ccCCHHHHHHHHHHHc
Confidence 2 5688999999988763
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-21 Score=160.99 Aligned_cols=232 Identities=24% Similarity=0.270 Sum_probs=158.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCchhhchhhhhhc-------------CCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPEQKRDLSFLTN-------------LPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~D~~ 67 (243)
..|+|||||||||+|+-++++|+... -+++++.| .....+..+++.. .+..-.++..+.||+.
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR-~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIR-AKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEe-cCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 46899999999999999999998864 47888888 5443333333321 1223468899999998
Q ss_pred Ch------hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC--C
Q 026091 68 NP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK--D 139 (243)
Q Consensus 68 d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~--~ 139 (243)
++ .+++.+.+++|+|||+||..... ++.+.....|..|+.++++.|++..+.+.++|+||+.+. .... .
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFd--e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i~ 166 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFD--EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHIE 166 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccc--hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-ccccccc
Confidence 65 46666778999999999986654 556688999999999999999999778999999998654 2211 1
Q ss_pred cccccCCC------------CCchhhhhh----c-CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 140 VDMLDETF------------WSDVDYIRK----L-DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 140 ~~~~~e~~------------~~~~~~~~~----~-~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
+.++.+.. +.+++.... + ..+.+.|..+|+.+|.++...+ .+++.+|+||+.|......+.
T Consensus 167 E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~ 244 (467)
T KOG1221|consen 167 EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPF 244 (467)
T ss_pred ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCC
Confidence 11111111 111122211 1 1356779999999999999854 689999999999999765544
Q ss_pred CCCcH------HHHHHHHhcCccccc--cccCcCceeHHHHHHhhhc
Q 026091 203 LAGSV------RGTLAMVMGNREEYS--MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 203 ~~~~~------~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~ 241 (243)
..... ..+.....|.-..+. .+..-+.|.+|.|+++++.
T Consensus 245 pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia 291 (467)
T KOG1221|consen 245 PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIA 291 (467)
T ss_pred CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHH
Confidence 22110 000011111111111 2567899999999999874
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=148.82 Aligned_cols=207 Identities=13% Similarity=0.057 Sum_probs=142.4
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCch--hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPE--QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
+.|+++||||+ +.||++++++|++.|++|++..|+... ..+.+..+.. ......++++|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE---PLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh---ccCcceEeecCcCCHHHHHHHHHHH
Confidence 56899999986 899999999999999999888763221 1122222221 12346789999999999888875
Q ss_pred -----cccEEEEeeeccC------C---CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccc
Q 026091 78 -----GCTGVIHVAAPID------I---HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 -----~~d~vi~~a~~~~------~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
.+|++|||||... . .+.+.+...+++|+.++..+.+++.+.- .-++||++||.......
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------ 155 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI------ 155 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC------
Confidence 3799999998642 1 2335567889999999999888766532 12589999996532111
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
+....|+.+|.+.+.+.+.++.+. |++++.+.||.+-.+..... ... ......... ..
T Consensus 156 ----------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~ 216 (258)
T PRK07370 156 ----------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGI-LDMIHHVEE-KA 216 (258)
T ss_pred ----------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccc-hhhhhhhhh-cC
Confidence 112459999999999999998764 79999999999988742211 000 011111111 11
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
++. .+...+|+++++.+++
T Consensus 217 p~~-----r~~~~~dva~~~~fl~ 235 (258)
T PRK07370 217 PLR-----RTVTQTEVGNTAAFLL 235 (258)
T ss_pred CcC-----cCCCHHHHHHHHHHHh
Confidence 222 5778899999988864
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-20 Score=149.51 Aligned_cols=205 Identities=16% Similarity=0.141 Sum_probs=139.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc-----hhhchhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP-----EQKRDLSFL-TNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
+.|+++||||+++||++++++|++.|++|+++.|+.+ +..+.+..+ .+....+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 4689999999999999999999999999999887431 000111111 1111224467889999999988887765
Q ss_pred -------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CC-----ccEEEEEecceeeecC
Q 026091 78 -------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GT-----VKRVVYTSSASTVHFS 136 (243)
Q Consensus 78 -------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----~~~~i~~Ss~~~~~~~ 136 (243)
.+|++||+||.... ...+.+...+++|+.++..+.+++.+. .. -.+||++||.+...+.
T Consensus 85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 164 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS 164 (286)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence 47999999997542 233557788999999999988776532 10 1489999997654332
Q ss_pred CCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHH
Q 026091 137 GKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM 213 (243)
Q Consensus 137 ~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~ 213 (243)
+ ....|+.+|.+.+.+.+.++.+ +|++++.+.|+ +..+.. ..... .
T Consensus 165 ~----------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~----~~~~~----~ 213 (286)
T PRK07791 165 V----------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT----ETVFA----E 213 (286)
T ss_pred C----------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc----hhhHH----H
Confidence 1 1235999999999999998876 58999999998 433321 11111 1
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...... .+...+...+|+|+++++++
T Consensus 214 ~~~~~~----~~~~~~~~pedva~~~~~L~ 239 (286)
T PRK07791 214 MMAKPE----EGEFDAMAPENVSPLVVWLG 239 (286)
T ss_pred HHhcCc----ccccCCCCHHHHHHHHHHHh
Confidence 111111 11113567999999988763
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-20 Score=147.73 Aligned_cols=209 Identities=14% Similarity=0.090 Sum_probs=141.1
Q ss_pred CCC-CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 1 MEE-EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 1 m~~-~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
|.. +.|+++|||| ++.||+++++.|+++|++|++..| .....+.+..+... ......+++|++|.++++++++
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYV-VDKLEERVRKMAAE---LDSELVFRCDVASDDEINQVFA 76 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-cHHHHHHHHHHHhc---cCCceEEECCCCCHHHHHHHHH
Confidence 443 3579999997 679999999999999999998877 33322333333221 1234678999999999888875
Q ss_pred -------cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEEecceeeecCCC
Q 026091 78 -------GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 78 -------~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~ 138 (243)
++|++|||||.... .+.+.+...+++|+.++..+.+.+... ..-.+||++||.+...+.+
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~- 155 (261)
T PRK08690 77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP- 155 (261)
T ss_pred HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC-
Confidence 47999999997532 112345566788998888877765442 1125899999876432221
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM 215 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~ 215 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+..... ... ........
T Consensus 156 ---------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~-~~~-~~~~~~~~ 212 (261)
T PRK08690 156 ---------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI-ADF-GKLLGHVA 212 (261)
T ss_pred ---------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC-Cch-HHHHHHHh
Confidence 1245999999999999988765 589999999999988742211 110 11111111
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+ ..++. .+..++|+|+++.+++
T Consensus 213 ~-~~p~~-----r~~~peevA~~v~~l~ 234 (261)
T PRK08690 213 A-HNPLR-----RNVTIEEVGNTAAFLL 234 (261)
T ss_pred h-cCCCC-----CCCCHHHHHHHHHHHh
Confidence 1 12222 6788999999998864
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-20 Score=147.29 Aligned_cols=170 Identities=22% Similarity=0.209 Sum_probs=123.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC--ChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN--NPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d~~~~~~~~~---- 77 (243)
+.|+++||||+|+||.+++++|++.|++|++++|+..........+... ...+++++.+|++ +.+++.++++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA--GGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999433222222222221 1235778888886 5555555543
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|+|||+|+.... ...+.+...+++|+.++.++++++. +.+ .++|+++||.....+.+
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~------- 160 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA------- 160 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC-------
Confidence 57999999986432 2234566789999999888888764 345 67999999975432221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPF 198 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+++.++.+. +++++.++|+.+.++.
T Consensus 161 ---------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~ 202 (247)
T PRK08945 161 ---------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202 (247)
T ss_pred ---------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence 12359999999999999887664 7999999999997763
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=146.27 Aligned_cols=206 Identities=15% Similarity=0.068 Sum_probs=142.3
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||+ +.||++++++|+++|++|++..| +.+..+.+..+... .....++++|++|.++++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYL-NDKARPYVEPLAEE---LDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHHHh---hccceEEecCcCCHHHHHHHHHHHHH
Confidence 46899999998 59999999999999999999988 43222222222211 1235678999999998888765
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++|||||.... .+.+.+...+++|+.++..+.+.+.+.- .-.++|++||.+.....
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~-------- 156 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV-------- 156 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC--------
Confidence 37999999986431 2235577899999999999988776542 12589999986432111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+..... ... ....+.... ..+.
T Consensus 157 --------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~p~ 219 (258)
T PRK07533 157 --------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DDF-DALLEDAAE-RAPL 219 (258)
T ss_pred --------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CCc-HHHHHHHHh-cCCc
Confidence 01235999999999999998876 489999999999988743211 111 111111111 1122
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++++++
T Consensus 220 ~-----r~~~p~dva~~~~~L~ 236 (258)
T PRK07533 220 R-----RLVDIDDVGAVAAFLA 236 (258)
T ss_pred C-----CCCCHHHHHHHHHHHh
Confidence 2 5788999999988764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=150.05 Aligned_cols=204 Identities=18% Similarity=0.177 Sum_probs=138.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
|+++||||+|+||+++++.|+++|++|++++| +.+.... ...+... ......++.+|++|.+++.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR-DADGLAQTVADARAL--GGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc--CCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999999999998 4432211 1222211 12235668899999988877765
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||++|.... .+.+.+...+++|+.++.++++++.. .+..++||++||.....+.+
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~----------- 146 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP----------- 146 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC-----------
Confidence 37999999986432 23345567899999999999998653 22136899999975432211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC----CcHHHHHHHHhcCcccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA----GSVRGTLAMVMGNREEY 221 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +++++++++||.+.++....... ..-..... ...
T Consensus 147 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~----- 209 (272)
T PRK07832 147 -----------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQK-WVD----- 209 (272)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHH-HHH-----
Confidence 1235999999888888877644 58999999999999885332100 00000000 000
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
......+..+|+|++++++
T Consensus 210 --~~~~~~~~~~~vA~~~~~~ 228 (272)
T PRK07832 210 --RFRGHAVTPEKAAEKILAG 228 (272)
T ss_pred --hcccCCCCHHHHHHHHHHH
Confidence 0011468899999998765
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=145.76 Aligned_cols=203 Identities=15% Similarity=0.103 Sum_probs=138.3
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCch-------hhchhhhh-hcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPE-------QKRDLSFL-TNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
++|+++||||+| .||++++++|+++|++|+++.|+... .......+ ......+.++.++++|++|.+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 568999999995 89999999999999999887542100 01111111 111222457889999999999888
Q ss_pred HHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCC
Q 026091 74 AAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~ 137 (243)
++++ .+|++||+||.... ...+.+...+++|+.++..+.+.+. +.+ -++||++||.....+.
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~- 162 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGPM- 162 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCCC-
Confidence 8875 36999999986432 2234566789999999888865443 333 4599999997543211
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+-++.... ......
T Consensus 163 ---------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-------~~~~~~ 214 (256)
T PRK12859 163 ---------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-------EIKQGL 214 (256)
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-------HHHHHH
Confidence 12246999999999999998866 58999999999997763211 111111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ...++. .+...+|+|++++++
T Consensus 215 ~-~~~~~~-----~~~~~~d~a~~~~~l 236 (256)
T PRK12859 215 L-PMFPFG-----RIGEPKDAARLIKFL 236 (256)
T ss_pred H-hcCCCC-----CCcCHHHHHHHHHHH
Confidence 1 111122 466789999998776
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=163.96 Aligned_cols=168 Identities=20% Similarity=0.223 Sum_probs=124.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+|+++||||+|+||++++++|+++|++|++++| +.+..... ..+... .....+..+++|++|.+++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r-~~~~~~~~~~~l~~~-~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL-NLEAAEAVAAEINGQ-FGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhh-cCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999999 44322221 111110 012357789999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++..+.+.+. +.+...+||++||...+.+.+
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~--------- 561 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK--------- 561 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC---------
Confidence 57999999996542 1223456778889888877765443 333125899999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCcee
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVT 195 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~ 195 (243)
....|+.+|.+.+.+++.++.+ +|++++.++|+.++
T Consensus 562 -------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 562 -------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 2246999999999999999876 48999999999997
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=149.12 Aligned_cols=162 Identities=21% Similarity=0.206 Sum_probs=122.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
|++++||||||+||++++++|+++|++|++++|+..... .. ..+.++.++++|+.|.+++.++++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 72 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AA---AAGERLAEVELDLSDAAAAAAWLAGDLLAAF 72 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hh---ccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 358999999999999999999999999999999433211 01 123468899999999998887542
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
.+|.+||+|+.... ...+.+...++.|+.++..+.+.+.+ .+ .++||++||...+.+.+
T Consensus 73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------ 145 (243)
T PRK07023 73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYA------ 145 (243)
T ss_pred ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCC------
Confidence 36899999986432 12344567888999997777665554 33 56999999976543221
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCC
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~ 197 (243)
+...|+.+|.+.|.+++.++.+ .+++++.++||.+-++
T Consensus 146 ----------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 ----------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 2245999999999999988765 5899999999998765
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=151.25 Aligned_cols=164 Identities=18% Similarity=0.132 Sum_probs=123.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++.+|+...... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~---~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA---AGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh---cCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999998874332221 1122221 24578899999999988888775
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC----------CccEEEEEecceeeecCCCCcc
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG----------TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
++|++||+||.... ...+++...+++|+.++.++++++...- .-.+||++||.+...+.+
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 163 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV---- 163 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC----
Confidence 47999999997543 2234566789999999999988765321 014899999976443221
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccC
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPS 192 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~ 192 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.|+
T Consensus 164 ------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 164 ------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 1234999999999999988875 58999999997
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=145.74 Aligned_cols=169 Identities=16% Similarity=0.108 Sum_probs=126.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~ 79 (243)
+.|+++||||+|+||+++++.|++.|++|++++| +...... ...+... .+.++.++.+|++|.+++.++++ ++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR-DADALEALAADLRAA--HGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 5689999999999999999999999999999999 4432222 1112111 13468899999999999888776 48
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|.+||+||.... ...+.+...+++|+.+...+++.+. +.+ -+++|++||.....+.
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~-------------- 147 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPD-------------- 147 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCC--------------
Confidence 999999986432 2334567788999999988888764 333 3589999986432111
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
+....|..+|.+.+.+.+.++.+ +|++++.++||.+.++.
T Consensus 148 --------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 148 --------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR 190 (259)
T ss_pred --------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence 01234899999999999988765 48999999999998873
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=144.33 Aligned_cols=206 Identities=12% Similarity=0.032 Sum_probs=141.3
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||++ .||++++++|+++|++|++..| +....+....+... .....++++|++|+++++++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r-~~~~~~~~~~l~~~---~g~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQ-SEVLEKRVKPLAEE---IGCNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeC-chHHHHHHHHHHHh---cCCceEEEccCCCHHHHHHHHHHHHH
Confidence 357899999997 8999999999999999998887 43222223333221 1123467899999999888875
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+|+.... .+.+.+...+++|+.++..+++.+.+.- .-.+||++||.+.....+
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------- 155 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP------- 155 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC-------
Confidence 37999999986421 2334577889999999999888765432 125899999865432111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+..... ... ......... ..++
T Consensus 156 ---------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~p~ 217 (260)
T PRK06603 156 ---------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDF-STMLKSHAA-TAPL 217 (260)
T ss_pred ---------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCc-HHHHHHHHh-cCCc
Confidence 1235999999999999998876 489999999999987642211 111 111111111 1122
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++++++
T Consensus 218 ~-----r~~~pedva~~~~~L~ 234 (260)
T PRK06603 218 K-----RNTTQEDVGGAAVYLF 234 (260)
T ss_pred C-----CCCCHHHHHHHHHHHh
Confidence 2 5788999999998874
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=146.38 Aligned_cols=168 Identities=19% Similarity=0.193 Sum_probs=129.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+|+|+||||+++||.+++..|+++|.+++.+.| ..+..+.. +.+....... ++..+++|++|.+++.++++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar-~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVAR-RARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeeh-hhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999888888 44444444 4444432222 79999999999999997764
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++|||||.... ...++.+..+++|+.|+..+.+++... + -+|||.+||.++....+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P--------- 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLP--------- 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCC---------
Confidence 58999999997553 334556679999999988887766554 4 47999999987654442
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---C--ccEEEEccCceeCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---G--LDLVTIIPSFVTGP 197 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---g--i~~~~~rp~~i~G~ 197 (243)
....|..||.+.+.+...+.++. + +.+ ++-||.|-..
T Consensus 159 -------------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te 200 (282)
T KOG1205|consen 159 -------------FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETE 200 (282)
T ss_pred -------------cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeec
Confidence 23469999999999999888775 2 333 5889998765
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=146.30 Aligned_cols=206 Identities=12% Similarity=0.043 Sum_probs=142.4
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||+ +.||.++++.|++.|++|++..| +....+.+..+... ......+++|++|.++++++++
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQ-GDALKKRVEPLAAE---LGAFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-chHHHHHHHHHHHh---cCCceEEecCCCCHHHHHHHHHHHHH
Confidence 35899999997 89999999999999999988877 43222223322211 1235678999999998888875
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+||.... .+.+.+...+++|+.++..+++.+.+.- +-.++|++||.+.....
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-------- 156 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM-------- 156 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC--------
Confidence 37999999986431 2234677899999999999998877642 13589999986432111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
|....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+..... ... ..... ......++
T Consensus 157 --------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~-~~~~~~p~ 219 (272)
T PRK08159 157 --------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDF-RYILK-WNEYNAPL 219 (272)
T ss_pred --------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Ccc-hHHHH-HHHhCCcc
Confidence 11235999999999999999876 489999999999987632211 110 11111 11111122
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++++++
T Consensus 220 ~-----r~~~peevA~~~~~L~ 236 (272)
T PRK08159 220 R-----RTVTIEEVGDSALYLL 236 (272)
T ss_pred c-----ccCCHHHHHHHHHHHh
Confidence 2 5688999999988764
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=143.64 Aligned_cols=206 Identities=16% Similarity=0.088 Sum_probs=141.4
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++|||| ++.||.+++++|++.|++|+++.| .....+.+..+.... .....+.+|++|+++++++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYV-GDRFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEcc-chHHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHHHHHH
Confidence 3589999996 689999999999999999998876 322222333222211 123468899999999988875
Q ss_pred ---cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
.+|++||+||.... .+.+++...+++|+.++..+.+++.+.- +-+++|++||.+.....
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~------- 153 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV------- 153 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC-------
Confidence 47999999986432 1234566789999999999988877642 13589999986542211
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+..... .. .......... ..+
T Consensus 154 ---------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~p 215 (260)
T PRK06997 154 ---------------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI-KD-FGKILDFVES-NAP 215 (260)
T ss_pred ---------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc-cc-hhhHHHHHHh-cCc
Confidence 11235999999999999999876 489999999999987632211 11 0111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+..++|+++++.+++
T Consensus 216 ~~-----r~~~pedva~~~~~l~ 233 (260)
T PRK06997 216 LR-----RNVTIEEVGNVAAFLL 233 (260)
T ss_pred cc-----ccCCHHHHHHHHHHHh
Confidence 22 5788999999998763
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-19 Score=142.01 Aligned_cols=215 Identities=18% Similarity=0.186 Sum_probs=150.1
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
..+|+++||||+..||+++|++|++.|++|++.+|+.+........+......+.++..+.+|+++.+..+++++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999994443222222222222235578999999998877666653
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHH-HHHHHHHHHHhcC---CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVS-GTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~-~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+. .+..+.+.+.+.- +-..++++||.+.+.....
T Consensus 86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~------ 159 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG------ 159 (270)
T ss_pred hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC------
Confidence 48999999997553 345667789999999 4666666655541 1457888888764422210
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC-CcHHHHHHH-HhcCcc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA-GSVRGTLAM-VMGNRE 219 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~-~~~~~~~~~-~~~~~~ 219 (243)
+...|+.+|.+.+++.+.++.+ +|++++++-||.+.++....... .....+.+. ......
T Consensus 160 ---------------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (270)
T KOG0725|consen 160 ---------------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV 224 (270)
T ss_pred ---------------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc
Confidence 1145999999999999999876 58999999999999986111111 111222221 122233
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+.. .+...+|+++++.+++
T Consensus 225 p~g-----r~g~~~eva~~~~fla 243 (270)
T KOG0725|consen 225 PLG-----RVGTPEEVAEAAAFLA 243 (270)
T ss_pred ccC-----CccCHHHHHHhHHhhc
Confidence 344 7889999999988763
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=144.51 Aligned_cols=203 Identities=18% Similarity=0.148 Sum_probs=134.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhH----HHHh----
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESF----DAAI---- 76 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~---- 76 (243)
++++||||+|+||+++++.|+++|++|+++.|++.+..... ..+... .+..+.++.+|++|.+++ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR--RPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc--cCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 57999999999999999999999999999877444322221 212111 123567889999998754 3333
Q ss_pred ---ccccEEEEeeeccCC------CCC----------ChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEEe
Q 026091 77 ---AGCTGVIHVAAPIDI------HGK----------EPEEVIIQRAVSGTIGILKSCLKSG---------TVKRVVYTS 128 (243)
Q Consensus 77 ---~~~d~vi~~a~~~~~------~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~S 128 (243)
.++|+||||||.... ... ..+...+++|+.++..+.+++.+.. +..+++++|
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 258999999986432 111 1355789999999999988765432 123577777
Q ss_pred cceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC
Q 026091 129 SASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG 205 (243)
Q Consensus 129 s~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~ 205 (243)
|....... ++...|+.+|.+.+.+.+.++.+ +|++++.++||.+..+.... .
T Consensus 160 s~~~~~~~----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~ 214 (267)
T TIGR02685 160 DAMTDQPL----------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---F 214 (267)
T ss_pred hhhccCCC----------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---h
Confidence 75422111 12346999999999999998776 58999999999997663211 1
Q ss_pred cHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 206 SVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
......... .++. ..+...+|+++++++++
T Consensus 215 ---~~~~~~~~~-~~~~----~~~~~~~~va~~~~~l~ 244 (267)
T TIGR02685 215 ---EVQEDYRRK-VPLG----QREASAEQIADVVIFLV 244 (267)
T ss_pred ---hHHHHHHHh-CCCC----cCCCCHHHHHHHHHHHh
Confidence 111111111 1110 14578899999988763
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-19 Score=142.46 Aligned_cols=206 Identities=16% Similarity=0.105 Sum_probs=139.9
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||++ .||+++++.|++.|++|++..|+ ....+....+.. .......+.+|++|+++++++++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAA---QLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHh---ccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 357999999985 99999999999999999988884 321122222221 12346788999999999888875
Q ss_pred ---cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
.+|++||+||.... ...+.+...+++|+.++..+.+.+...- .-.+||++||.+.....+
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~------ 154 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------ 154 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC------
Confidence 37999999986432 1123455678889999888887765431 125799999865321111
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+..... .. .......... ..+
T Consensus 155 ----------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~p 215 (262)
T PRK07984 155 ----------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEA-VTP 215 (262)
T ss_pred ----------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-Cc-hHHHHHHHHH-cCC
Confidence 1135999999999999999876 489999999999987632211 11 1111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. .+...+|+++++++++
T Consensus 216 ~~-----r~~~pedva~~~~~L~ 233 (262)
T PRK07984 216 IR-----RTVTIEDVGNSAAFLC 233 (262)
T ss_pred Cc-----CCCCHHHHHHHHHHHc
Confidence 22 6788999999998864
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.5e-20 Score=147.68 Aligned_cols=207 Identities=14% Similarity=0.081 Sum_probs=137.9
Q ss_pred eEEEecCchhhHHHHHHHHHH----cCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc---
Q 026091 7 RVCVTGGTGFIGSWLIMRLLD----HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC--- 79 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--- 79 (243)
.++||||+|+||.+++++|++ .|++|++++|+..........+... ..+..+.++.+|++|.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 689999999999999999997 7999999999433222222222210 11346888999999999888876531
Q ss_pred --------cEEEEeeeccCC----C----CCChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEEecceeeecCCC
Q 026091 80 --------TGVIHVAAPIDI----H----GKEPEEVIIQRAVSGTIGILKSCLKS-----GTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 80 --------d~vi~~a~~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~i~~Ss~~~~~~~~~ 138 (243)
|++||+||.... . ..+.+...+++|+.++..+.+.+.+. +..++||++||.+...+.+
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~- 159 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK- 159 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC-
Confidence 589999986432 1 12356678999999988887766543 2125899999976432221
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC-cHHHHHHHH
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG-SVRGTLAMV 214 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~-~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+......+. .-.......
T Consensus 160 ---------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 218 (256)
T TIGR01500 160 ---------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGL 218 (256)
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHH
Confidence 2245999999999999998876 489999999999987632110000 000000001
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ...+.. .+..++|+|++++++
T Consensus 219 ~-~~~~~~-----~~~~p~eva~~~~~l 240 (256)
T TIGR01500 219 Q-ELKAKG-----KLVDPKVSAQKLLSL 240 (256)
T ss_pred H-HHHhcC-----CCCCHHHHHHHHHHH
Confidence 0 001111 578899999998876
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=161.06 Aligned_cols=169 Identities=19% Similarity=0.192 Sum_probs=129.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||+++++.|+++|++|++++| +++..... ..+.. .+.++.++.+|+.|.++++++++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVAR-NGEALDELVAEIRA---KGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3679999999999999999999999999999999 44332221 21211 24478999999999999988876
Q ss_pred --cccEEEEeeeccCCC----C---CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDIH----G---KEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~----~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||..... . .+.+...+++|+.++.++++.+. +.+ .++||++||.+++.+.+
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 517 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAP------- 517 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCC-------
Confidence 479999999964321 1 13456789999999988877654 345 57999999987653321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..
T Consensus 518 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~ 560 (657)
T PRK07201 518 ---------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMI 560 (657)
T ss_pred ---------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccccc
Confidence 2245999999999999988766 489999999999998754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-19 Score=156.52 Aligned_cols=170 Identities=18% Similarity=0.217 Sum_probs=129.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+...|+++||||+++||.+++++|+++|++|+++.| +.+....+. ... +..+.++++|++|+++++++++
T Consensus 1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (520)
T PRK06484 1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR-NVERARERA--DSL---GPDHHALAMDVSDEAQIREGFEQLH 74 (520)
T ss_pred CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceeEEEeccCCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999 443222111 111 3467889999999998888775
Q ss_pred ----cccEEEEeeeccC-------CCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccc
Q 026091 78 ----GCTGVIHVAAPID-------IHGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ----~~d~vi~~a~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++||+||... ..+.+++...+++|+.++..+++++.+. +.-.+||++||.......+
T Consensus 75 ~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----- 149 (520)
T PRK06484 75 REFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----- 149 (520)
T ss_pred HHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC-----
Confidence 3799999998632 1233556789999999999998877654 3113899999976443221
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ ++++++.++||.+.++.
T Consensus 150 -----------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 150 -----------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred -----------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 1245999999999999998876 48999999999998775
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-19 Score=137.80 Aligned_cols=168 Identities=17% Similarity=0.148 Sum_probs=127.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~ 79 (243)
||+++||||+|+||++++++|++.|++|++++| +....+. +.. .+++++.+|+++.++++++++ ++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r-~~~~~~~---~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATAR-DAAALAA---LQA-----LGAEALALDVADPASVAGLAWKLDGEAL 71 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC-CHHHHHH---HHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence 478999999999999999999999999999999 4433222 222 246789999999998888653 37
Q ss_pred cEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|.|||+++.... .+.+++...++.|+.++.++++++.+. ....+++++||...+.+....
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 140 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG----------- 140 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC-----------
Confidence 999999987532 133456788999999999999988753 113579999886543322100
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~ 200 (243)
.+.+.|+.+|...+.+++.++.++ +++++.++||.+..+...
T Consensus 141 --------~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~ 183 (222)
T PRK06953 141 --------TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG 183 (222)
T ss_pred --------CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC
Confidence 012359999999999999987665 899999999999988533
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.1e-19 Score=137.92 Aligned_cols=169 Identities=21% Similarity=0.208 Sum_probs=124.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~ 79 (243)
||+++||||+|++|++++++|+++|++|++++| ++.....+. .. .++.++.+|++|.+++.++++ ++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~---~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~i 72 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVR-GPQQDTALQ---AL----PGVHIEKLDMNDPASLDQLLQRLQGQRF 72 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeC-CCcchHHHH---hc----cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence 478999999999999999999999999999999 443222221 11 357888999999998888876 47
Q ss_pred cEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|+|||+||.... ...+++...+++|+.++..+.+++.+.- ...+++++||........ + .
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~----~-~------ 141 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP----D-G------ 141 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC----C-C------
Confidence 999999987532 1224455677889999999988876542 135788888753221110 0 0
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~ 200 (243)
.....|+.+|.+.+.+++.++.+ ++++++.++||.+-.+...
T Consensus 142 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~ 186 (225)
T PRK08177 142 --------GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG 186 (225)
T ss_pred --------CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence 01134999999999999998766 4799999999999887643
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.7e-19 Score=135.45 Aligned_cols=174 Identities=20% Similarity=0.171 Sum_probs=130.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cccEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCTGVI 83 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi 83 (243)
+++||||+|+||.++++.|.++ ++|++++| +. ..+++|++|.++++++++ ++|++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r-~~-------------------~~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGR-SS-------------------GDVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEec-CC-------------------CceEecCCChHHHHHHHHhcCCCCEEE
Confidence 7999999999999999999998 99999998 43 135789999999988887 589999
Q ss_pred EeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 84 HVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 84 ~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
|+||.... ...+++...+++|+.++.++++++.+.- +..+|+++||.....+.+
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~-------------------- 120 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP-------------------- 120 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC--------------------
Confidence 99986432 2234566788999999999999877641 135799999865432211
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDV 235 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 235 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+-.+... . +.. +. ...++..+|+
T Consensus 121 --~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~---------~-----~~~--~~---~~~~~~~~~~ 179 (199)
T PRK07578 121 --GGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK---------Y-----GPF--FP---GFEPVPAARV 179 (199)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh---------h-----hhc--CC---CCCCCCHHHH
Confidence 2245999999999999998875 5899999999988554210 0 000 00 1146889999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++++
T Consensus 180 a~~~~~~ 186 (199)
T PRK07578 180 ALAYVRS 186 (199)
T ss_pred HHHHHHH
Confidence 9988765
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=158.11 Aligned_cols=168 Identities=19% Similarity=0.156 Sum_probs=129.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
.++++||||+|+||++++++|+++|++|++++| +....... ..+.. .+.++.++.+|++|.+++.++++.
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDI-DEAAAERTAELIRA---AGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999999999 44332222 22211 234688999999999998888763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++|||||.... .+.+.+...+++|+.++.++.+++.. .+.-++||++||.+++.+.+
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 460 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------- 460 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence 7999999997543 23345667888999999998886543 33125899999987653321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+-.+.
T Consensus 461 ------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 461 ------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred ------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 2346999999999999888765 48999999999998764
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-18 Score=125.94 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=138.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|||.|+||||.+|++++++++++||+|++++| ++++.... .++...+.|+.|++++.+.+.+.|+||..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR-n~~K~~~~----------~~~~i~q~Difd~~~~a~~l~g~DaVIsA 69 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVR-NASKLAAR----------QGVTILQKDIFDLTSLASDLAGHDAVISA 69 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEe-ChHhcccc----------ccceeecccccChhhhHhhhcCCceEEEe
Confidence 47999999999999999999999999999999 55333211 37789999999999999999999999987
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
-+.... ++... .......|++..+..+ ++|++.+++++..+-.+. ...++-..+ |...|.
T Consensus 70 ~~~~~~---~~~~~----~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g-~rLvD~p~f-----------P~ey~~ 129 (211)
T COG2910 70 FGAGAS---DNDEL----HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG-TRLVDTPDF-----------PAEYKP 129 (211)
T ss_pred ccCCCC---ChhHH----HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC-ceeecCCCC-----------chhHHH
Confidence 554321 22111 1223667888888889 999999999887665432 222222221 334477
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
.++..+|. +..+..+..++|+.+-|...|-|+.... ....+....+.....-++|+..|.|-+++-
T Consensus 130 ~A~~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg---------~yrlggD~ll~n~~G~SrIS~aDYAiA~lD 195 (211)
T COG2910 130 EALAQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTG---------NYRLGGDQLLVNAKGESRISYADYAIAVLD 195 (211)
T ss_pred HHHHHHHH-HHHHhhccCcceEEeCcHHhcCCccccC---------ceEeccceEEEcCCCceeeeHHHHHHHHHH
Confidence 77777774 3344445569999999999999964433 112233333344455589999999998763
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=150.49 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=126.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.++++||||+|+||++++++|+++|++|++++|+ .... .+..+.. ..+..++.+|++|.++++++++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~-~~~~-~l~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP-AAGE-ALAAVAN----RVGGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-ccHH-HHHHHHH----HcCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 35799999999999999999999999999999883 2211 1121111 0134678899999998888765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++.+.+.+.. +-.+||++||.+.+.+.+
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~----------- 351 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR----------- 351 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------
Confidence 47999999997543 2345567889999999999999987743 126899999976543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|...+.+++.++.+ +|++++.+.||.+-.+.
T Consensus 352 -----------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~ 393 (450)
T PRK08261 352 -----------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM 393 (450)
T ss_pred -----------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchh
Confidence 1245999999988888888755 48999999999986543
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-18 Score=136.91 Aligned_cols=205 Identities=16% Similarity=0.062 Sum_probs=138.4
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCC-chhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSD-PEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
+.|+++|||| ++.||.++++.|+++|++|++++|+. ++..+.+. .+. ...+.++++|++|+++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA--KRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH--Hhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 4589999999 89999999999999999999998843 21111111 111 2257789999999998888765
Q ss_pred ----cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+.+.+.- .-.+++++|+.... ..
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-~~------- 152 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-AW------- 152 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-cC-------
Confidence 47999999986421 1223455678999999998888776542 12578888754211 10
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+..... ... .......... .+
T Consensus 153 ---------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~~-~p 214 (256)
T PRK07889 153 ---------------PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-PGF-ELLEEGWDER-AP 214 (256)
T ss_pred ---------------CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-cCc-HHHHHHHHhc-Cc
Confidence 01134899999999999998876 489999999999988743211 110 1111111111 11
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+ .+.+...+|+|+++++++
T Consensus 215 ~----~~~~~~p~evA~~v~~l~ 233 (256)
T PRK07889 215 L----GWDVKDPTPVARAVVALL 233 (256)
T ss_pred c----ccccCCHHHHHHHHHHHh
Confidence 1 113678999999988764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=137.30 Aligned_cols=164 Identities=15% Similarity=0.141 Sum_probs=114.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+++||||+|+||++++++|+++|++|++++|+....... .. ......+.+|++|.+++.+.+.++|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~-----~~~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---ND-----ESPNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hc-----cCCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 458999999999999999999999999999999944221111 11 1123678899999999999998999999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCcccccCCCCCchhhhh
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIR 155 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~ 155 (243)
||||.... .+.+++...+++|+.++.++++.+.+.- .-..++..||.+.. .+
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~--~~------------------ 144 (245)
T PRK12367 85 LNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI--QP------------------ 144 (245)
T ss_pred ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc--CC------------------
Confidence 99986432 2345677889999999999999776531 01234444443321 10
Q ss_pred hcCCCCchHHhhHHHHHHHH---HHHHH---HcCccEEEEccCceeCCC
Q 026091 156 KLDIWGKSYKLSKTLAERAA---LEFAE---EHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~---~~~~~---~~gi~~~~~rp~~i~G~~ 198 (243)
+....|+.||.+.+.+. ++++. ..++.+..+.||.+..+.
T Consensus 145 ---~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~ 190 (245)
T PRK12367 145 ---ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL 190 (245)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence 01134999999875433 22222 358999999999876553
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-19 Score=129.22 Aligned_cols=203 Identities=16% Similarity=0.190 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|..+||||+..||+++++.|.+.|++|.+..+++....+.... ++. ...-..|.+|+.+..+++..++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~---L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD---LGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh---cCC-CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 458899999999999999999999999999999955433333322 221 1345678999999988777665
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----G-TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+++++||||+... ..+++|.+.+.+|+.+.+...+++.+. + ..-+||.+||.-..-++.
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~--------- 159 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF--------- 159 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc---------
Confidence 36999999998765 457889999999999999888876654 2 123899999964332221
Q ss_pred CCCchhhhhhcCCCCchHHhhHH----HHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKT----LAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~----~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
..+.|+.+|. ......++++ +++|+++.+-||+|-.|......+.....+... ++..
T Consensus 160 -------------GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~-----iPmg 220 (256)
T KOG1200|consen 160 -------------GQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEAMPPKVLDKILGM-----IPMG 220 (256)
T ss_pred -------------cchhhhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhhhhcCHHHHHHHHcc-----CCcc
Confidence 1233888886 3445555555 349999999999999997666655544433322 2222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+-..+|+|+.++||+
T Consensus 221 -----r~G~~EevA~~V~fLA 236 (256)
T KOG1200|consen 221 -----RLGEAEEVANLVLFLA 236 (256)
T ss_pred -----ccCCHHHHHHHHHHHh
Confidence 6778899999988874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-18 Score=135.08 Aligned_cols=168 Identities=12% Similarity=0.083 Sum_probs=122.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|+.+.|+++||||++.||++++++|+++|++|++++| +.+..+. ...+.. .+.++..+.+|+.|.+++.++++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r-~~~~l~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQ-DQSALKDTYEQCSA---LTDNVYSFQLKDFSQESIRHLFDAI 76 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCCeEEEEccCCCHHHHHHHHHHH
Confidence 6667789999999999999999999999999999999 4433222 122222 23467889999999998887753
Q ss_pred ------cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcc
Q 026091 78 ------GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
.+|++||+||.... .+.+.+...+++|+.++..+.+.+. +.++-+.||++||.... +
T Consensus 77 ~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~---- 149 (227)
T PRK08862 77 EQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---Q---- 149 (227)
T ss_pred HHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---C----
Confidence 57999999974321 1223445567778877776655443 33213589999985321 1
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+
T Consensus 150 ------------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 150 ------------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred ------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 1134999999999999998876 4899999999999887
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-18 Score=140.84 Aligned_cols=189 Identities=17% Similarity=0.137 Sum_probs=125.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+++||.++++.|+++| ++|++++| +........ ......+..+.++.+|++|.++++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r-~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACR-DFLKAEQAA--KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHH--HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 36799999999999999999999999 99999999 443222221 1111123467889999999998887764
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cC-CccEEEEEecceeeecCCCC--ccc
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SG-TVKRVVYTSSASTVHFSGKD--VDM 142 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~~i~~Ss~~~~~~~~~~--~~~ 142 (243)
++|++||+||.... .+.+.+...+++|+.++..+++.+.+ .+ ..++||++||.+.+.....+ ..+
T Consensus 79 ~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~ 158 (314)
T TIGR01289 79 GRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK 158 (314)
T ss_pred CCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence 47999999996432 12345667899999998888776554 21 13699999998654321100 000
Q ss_pred ccCCC-------CCch--hhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCcee
Q 026091 143 LDETF-------WSDV--DYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVT 195 (243)
Q Consensus 143 ~~e~~-------~~~~--~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~ 195 (243)
.+..+ +... ........+...|+.||.+...+.+.++++ .|++++.++||.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA 224 (314)
T ss_pred ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 00000 0000 000000112346999999988888888764 37999999999995
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=131.49 Aligned_cols=167 Identities=22% Similarity=0.234 Sum_probs=122.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------ 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------ 78 (243)
++++|+||+|++|.+++++|+++|+ .|++++|+..........+......+.++.++.+|+++.+++.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999986 688888843322111110111111244678899999999888887653
Q ss_pred -ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 79 -CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 79 -~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
+|.|||+++.... ...+.+...++.|+.++.++++.+++.+ .++++++||.....+..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~--------------- 144 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNP--------------- 144 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCC---------------
Confidence 5999999986432 2234556789999999999999998877 78999999976443321
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeC
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG 196 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G 196 (243)
....|+.+|.+.+.+++.+. ..+++++.+.||.+-|
T Consensus 145 -------~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~~ 180 (180)
T smart00822 145 -------GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWAD 180 (180)
T ss_pred -------CchhhHHHHHHHHHHHHHHH-hcCCceEEEeeccccC
Confidence 11349999999999997654 5699999999887643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-18 Score=135.30 Aligned_cols=167 Identities=16% Similarity=0.168 Sum_probs=119.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
|+++||||++.||.+++++|+ +|++|++++| +.+..+. ...+... ....+.++++|+.|.++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAAR-RPEAAQGLASDLRQR--GATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeC-CHHHHHHHHHHHHhc--cCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 479999999999999999998 5999999999 4433222 2222211 12347899999999988887764
Q ss_pred cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||..... ..+.+.+.+++|+.+...+++.+ ++.+.-++||++||.....+.+
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------- 145 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR----------- 145 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-----------
Confidence 479999999975431 12223456677888777665443 3332136899999976432221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+.++.
T Consensus 146 -----------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~ 187 (246)
T PRK05599 146 -----------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSM 187 (246)
T ss_pred -----------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchh
Confidence 1235999999999999998876 48999999999998874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=136.55 Aligned_cols=157 Identities=14% Similarity=0.108 Sum_probs=121.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----cccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~v 82 (243)
+++||||+|+||+++++.|+++|++|++++| +.+...... .. .+++++++|++|.+++.++++ ++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r-~~~~~~~~~--~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA-RRDDLEVAA--KE-----LDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 6999999999999999999999999999999 443322211 11 146788999999999988876 47999
Q ss_pred EEeeeccC----C------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 83 IHVAAPID----I------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 83 i~~a~~~~----~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
||+|++.. . ...+.+...+++|+.++.++++++.+.- +-.+||++||.+ .+
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~-------------- 135 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PP-------------- 135 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CC--------------
Confidence 99997421 0 0234577889999999999999877641 135899999854 10
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+
T Consensus 136 --------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 136 --------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred --------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 1134999999999999998876 4899999999999765
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-18 Score=141.72 Aligned_cols=172 Identities=18% Similarity=0.252 Sum_probs=123.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCC--hhhHH---HHhcc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNN--PESFD---AAIAG 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d--~~~~~---~~~~~ 78 (243)
+++++||||||+||++++++|+++|++|++++| +++..+.. ..+... ....++..+.+|+.+ .+.+. +.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR-NPDKLKDVSDSIQSK-YSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHHHHH-CCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 579999999999999999999999999999999 54433222 222111 112357788899985 23333 33333
Q ss_pred --ccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 79 --CTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 79 --~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
+|++||+||.... .+.+.+...+++|+.++.++.+.+.+ .+ .++||++||.+++....
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~-------- 201 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPS-------- 201 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC--------
Confidence 5699999987431 12234567899999999998887654 34 57999999976532110
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCC
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~ 199 (243)
.|....|+.||.+.+.+.+.++.+. |++++.+.||.+-++..
T Consensus 202 ------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~ 246 (320)
T PLN02780 202 ------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246 (320)
T ss_pred ------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcc
Confidence 0122469999999999999988764 89999999999988753
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=139.93 Aligned_cols=175 Identities=18% Similarity=0.143 Sum_probs=123.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh------hchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ------KRDLSFLT-NLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
+.|+++||||+++||++++++|++.|++|++++|+.... .+.+..+. .....+.++.++++|+.|++++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 458999999999999999999999999999999942110 01111111 11112346788999999999888887
Q ss_pred c-------cccEEEEee-ecc------CC---CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeec
Q 026091 77 A-------GCTGVIHVA-API------DI---HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHF 135 (243)
Q Consensus 77 ~-------~~d~vi~~a-~~~------~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~ 135 (243)
+ .+|++||+| |.. .. ...+.+...++.|+.++..+.+++.+. + -.+||++||......
T Consensus 87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~ 165 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccccc
Confidence 5 379999999 632 11 123445677888999888887766543 2 358999998543211
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCC
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPF 198 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~ 198 (243)
... . +....|+.+|.+...+.+.++.+. |++++.+.||.+-.+.
T Consensus 166 ~~~--------~-----------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~ 212 (305)
T PRK08303 166 ATH--------Y-----------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM 212 (305)
T ss_pred CcC--------C-----------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence 100 0 012359999999999999888764 7999999999997763
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=138.06 Aligned_cols=187 Identities=24% Similarity=0.246 Sum_probs=122.0
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEeee
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVAA 87 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 87 (243)
|+|+||||.+|++++++|++.+++|.+++|+.. . .....+.. .+++.+.+|+.|++++.++++++|+|+++.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-~-~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-S-DRAQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-H-HHHHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-h-hhhhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence 799999999999999999999999999999442 1 12222332 2778999999999999999999999998866
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhh
Q 026091 88 PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLS 167 (243)
Q Consensus 88 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~s 167 (243)
.... . ......+++++|+++| +++||+.|....+ . +.... .|..++...
T Consensus 74 ~~~~---~--------~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~-~---------~~~~~---------~p~~~~~~~ 122 (233)
T PF05368_consen 74 PSHP---S--------ELEQQKNLIDAAKAAG-VKHFVPSSFGADY-D---------ESSGS---------EPEIPHFDQ 122 (233)
T ss_dssp CSCC---C--------HHHHHHHHHHHHHHHT--SEEEESEESSGT-T---------TTTTS---------TTHHHHHHH
T ss_pred cchh---h--------hhhhhhhHHHhhhccc-cceEEEEEecccc-c---------ccccc---------cccchhhhh
Confidence 5431 1 2334679999999999 9999964432211 0 11000 022345667
Q ss_pred HHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC--cccccc--ccCcCc-eeHHHHHHhhhcc
Q 026091 168 KTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN--REEYSM--LLNISM-VHIDDVARAHIFF 242 (243)
Q Consensus 168 K~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~-i~v~Dva~a~~~~ 242 (243)
|...|+.+++ .+++++++|||..+....... .. .....+. ...+.. +....+ ++.+|+++++..+
T Consensus 123 k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~i 192 (233)
T PF05368_consen 123 KAEIEEYLRE----SGIPYTIIRPGFFMENLLPPF----AP--VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAI 192 (233)
T ss_dssp HHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTT----HH--TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHH
T ss_pred hhhhhhhhhh----ccccceeccccchhhhhhhhh----cc--cccccccceEEEEccCCCccccccccHHHHHHHHHHH
Confidence 8888887766 499999999999887532211 00 0011111 112222 333455 4999999987654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-17 Score=131.76 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=130.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
|+|+||||+|+||++++++|+++| ..|.+..| +.... . ...+++++++|++|.++++++.+ ++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~-~~~~~-----~-----~~~~~~~~~~Dls~~~~~~~~~~~~~~id 69 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYR-HHKPD-----F-----QHDNVQWHALDVTDEAEIKQLSEQFTQLD 69 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEcc-CCccc-----c-----ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence 479999999999999999999986 55555555 32111 0 13478899999999988777654 689
Q ss_pred EEEEeeeccCCC-----------CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCC
Q 026091 81 GVIHVAAPIDIH-----------GKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 81 ~vi~~a~~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|||+||..... ..+.+...+++|+.++..+.+.+.+.- ..++++++||.... .. . +.
T Consensus 70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~~-~-----~~ 141 (235)
T PRK09009 70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--IS-D-----NR 141 (235)
T ss_pred EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--cc-c-----CC
Confidence 999999975421 113355678899999988888766531 14589999874211 10 0 00
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
. ++...|+.+|.+.+.+.+.++.+ .+++++.+.||.+.++...... ...+.
T Consensus 142 ~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~ 197 (235)
T PRK09009 142 L-----------GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-------------QNVPK 197 (235)
T ss_pred C-----------CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------------hcccc
Confidence 0 12235999999999999998865 3799999999999887532110 01111
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .++..+|+|++++++
T Consensus 198 ~-----~~~~~~~~a~~~~~l 213 (235)
T PRK09009 198 G-----KLFTPEYVAQCLLGI 213 (235)
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 1 467888888887765
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-17 Score=140.31 Aligned_cols=165 Identities=14% Similarity=0.075 Sum_probs=113.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.++|+|+||||+|+||++++++|+++|++|++++|+.. .... .... ....+..+.+|++|.+++.+.+.++|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~-~l~~--~~~~---~~~~v~~v~~Dvsd~~~v~~~l~~IDiL 249 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD-KITL--EING---EDLPVKTLHWQVGQEAALAELLEKVDIL 249 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH-HHHH--HHhh---cCCCeEEEEeeCCCHHHHHHHhCCCCEE
Confidence 35789999999999999999999999999999999433 2211 1111 1224678899999999999999999999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhc----CC-c-c-EEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKS----GT-V-K-RVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~-~-~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
||+||.... .+.+.+...+++|+.++.++++++.+. +. . + .++.+|++ .. .+
T Consensus 250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa-~~--~~---------------- 310 (406)
T PRK07424 250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA-EV--NP---------------- 310 (406)
T ss_pred EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc-cc--cC----------------
Confidence 999986433 223455688999999999999987653 20 1 1 24444432 11 10
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGP 197 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~ 197 (243)
+....|+.||.+.+.+..-...+.++.+..+.||.+..+
T Consensus 311 -----~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~ 349 (406)
T PRK07424 311 -----AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSN 349 (406)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCC
Confidence 011349999999988754323334666666666665443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-17 Score=135.86 Aligned_cols=185 Identities=16% Similarity=0.120 Sum_probs=120.7
Q ss_pred EEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------ccc
Q 026091 9 CVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------GCT 80 (243)
Q Consensus 9 lvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d 80 (243)
+||||+++||.+++++|+++| ++|++.+| +........ ........++.++.+|+.|.++++++++ .+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r-~~~~~~~~~--~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACR-DFLKAERAA--KSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHH--HHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 599999999999999999999 99999998 443222111 1111123467889999999998887765 379
Q ss_pred EEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CC-ccEEEEEecceeeecCCCCc-cc---cc-
Q 026091 81 GVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GT-VKRVVYTSSASTVHFSGKDV-DM---LD- 144 (243)
Q Consensus 81 ~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~-~~---~~- 144 (243)
++||+||.... .+.+.+...+++|+.++..+++.+.+. +. .++||++||...+....... .+ .+
T Consensus 78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 157 (308)
T PLN00015 78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD 157 (308)
T ss_pred EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence 99999987432 133566789999999988887765543 10 25899999976432110000 00 00
Q ss_pred -----CC--CCCchhhh-hhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeC
Q 026091 145 -----ET--FWSDVDYI-RKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTG 196 (243)
Q Consensus 145 -----e~--~~~~~~~~-~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G 196 (243)
+. ..+...+. ....++...|+.||.+.+.+.+.++.+ .|++++.++||.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 00 00000000 000112346999999977777777665 479999999999953
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-18 Score=127.55 Aligned_cols=150 Identities=25% Similarity=0.235 Sum_probs=116.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeC--CchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRS--DPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
|+++||||+|.||..++++|+++| +.|++++|+ .+........+. ..+.++.++++|+++.++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK---APGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH---HTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 689999999999999999999995 577778884 122222222233 224688999999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
.+|++||+||.... ...+.+...++.|+.+...+.+++.+.+ -++||++||.....+.+
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~------------- 143 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSP------------- 143 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSST-------------
T ss_pred cccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCC-------------
Confidence 46999999997653 2346677899999999999999998855 68999999977553332
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~ 181 (243)
....|+.+|.+.+.+.+.++++
T Consensus 144 ---------~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 144 ---------GMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp ---------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CChhHHHHHHHHHHHHHHHHHh
Confidence 2346999999999999998876
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-17 Score=132.94 Aligned_cols=211 Identities=13% Similarity=0.062 Sum_probs=137.6
Q ss_pred CCCCCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhh--------cCCC--CCCCeEEEecCC-
Q 026091 1 MEEEKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLT--------NLPR--ASERLQIFNADL- 66 (243)
Q Consensus 1 m~~~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~--------~~~~--~~~~~~~~~~D~- 66 (243)
|..++|+++|||| +..||.++++.|++.|++|++ +|+.+. .+... .+. ..+. ..+....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPA-LNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcch-hhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 3456899999999 799999999999999999988 663221 11111 010 0000 011246778888
Q ss_pred -CChh------------------hHHHHhc-------cccEEEEeeeccC----C---CCCChHHHHHHHHHHHHHHHHH
Q 026091 67 -NNPE------------------SFDAAIA-------GCTGVIHVAAPID----I---HGKEPEEVIIQRAVSGTIGILK 113 (243)
Q Consensus 67 -~d~~------------------~~~~~~~-------~~d~vi~~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~ 113 (243)
.+.+ +++++++ ++|++|||||... . .+.+.+...+++|+.++..+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 3333 5565554 3799999996421 1 3346778899999999999988
Q ss_pred HHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC-chHHhhHHHHHHHHHHHHHH----cCccEE
Q 026091 114 SCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG-KSYKLSKTLAERAALEFAEE----HGLDLV 187 (243)
Q Consensus 114 ~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~~~~~~----~gi~~~ 187 (243)
++.+.- .-.++|++||.+.....+ .. ..|+.+|.+.+.+.+.++.+ +|++++
T Consensus 163 ~~~p~m~~~G~II~isS~a~~~~~p----------------------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn 220 (303)
T PLN02730 163 HFGPIMNPGGASISLTYIASERIIP----------------------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVN 220 (303)
T ss_pred HHHHHHhcCCEEEEEechhhcCCCC----------------------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEE
Confidence 776642 025899999975432221 11 25999999999999999875 379999
Q ss_pred EEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 188 TIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 188 ~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.||.+..+.... .... ........ ...+.. .+...+|++.++++++
T Consensus 221 ~V~PG~v~T~~~~~-~~~~-~~~~~~~~-~~~pl~-----r~~~peevA~~~~fLa 268 (303)
T PLN02730 221 TISAGPLGSRAAKA-IGFI-DDMIEYSY-ANAPLQ-----KELTADEVGNAAAFLA 268 (303)
T ss_pred EEeeCCccCchhhc-cccc-HHHHHHHH-hcCCCC-----CCcCHHHHHHHHHHHh
Confidence 99999998875432 1111 11111111 111122 5678899999988763
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8e-19 Score=134.02 Aligned_cols=227 Identities=18% Similarity=0.150 Sum_probs=159.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhcCCC--CCCCeEEEecCCCChhhHHHHhc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNLPR--ASERLQIFNADLNNPESFDAAIA--GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~--~~ 79 (243)
.|..||||-||.-|++|++.|+.+||+|.++.|++.. ....+..+-..|. .+..++.+.+|++|...+.++++ ++
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 3679999999999999999999999999999985543 3344444433332 34568899999999999999998 46
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCc--cEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTV--KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
+-|+|+|+..+.. +-+-....-++...|+.+|+++.+..+-. -+|-..||+. .++.- ...|..|..|..
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv-~e~PQsE~TPFy------ 179 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKV-QEIPQSETTPFY------ 179 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hcccc-cCCCcccCCCCC------
Confidence 8899999987651 11222356677888999999999887611 2555555554 43431 345566766543
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHHHHHhcCcccccc---ccCcCcee
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTLAMVMGNREEYSM---LLNISMVH 231 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~ 231 (243)
|.++|+.+|..+-.++-.|.+.+++-.|.=-.++--.|.+... ..++.+...+...++...+.. +..|+|-|
T Consensus 180 ---PRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh 256 (376)
T KOG1372|consen 180 ---PRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH 256 (376)
T ss_pred ---CCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence 6788999999999888888877776544333334444544333 223344455555666654442 66899999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
..|.++||+.+
T Consensus 257 A~dYVEAMW~m 267 (376)
T KOG1372|consen 257 AGDYVEAMWLM 267 (376)
T ss_pred hHHHHHHHHHH
Confidence 99999999864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-17 Score=127.09 Aligned_cols=168 Identities=13% Similarity=0.131 Sum_probs=129.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
.+++||||||++++|+.++.+|+++|..+.+.+.+.....+..+..... ++++...+|+++.+++.+..+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999999999666555444444433 378999999999998888875
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|++||+||.... .+.+..+..+++|+.+.....++ +.+.+ -+|||-++|..+..+.+
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~---------- 181 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPA---------- 181 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCc----------
Confidence 47999999997554 33455667889999987776665 44444 57999999987664442
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH------cCccEEEEccCceeCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE------HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~gi~~~~~rp~~i~G~~ 198 (243)
....|..||.++.-+.+.+..+ .|++++.+.|+.+-...
T Consensus 182 ------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm 226 (300)
T KOG1201|consen 182 ------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM 226 (300)
T ss_pred ------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc
Confidence 1234999999888887777644 37999999999887553
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-16 Score=128.53 Aligned_cols=185 Identities=21% Similarity=0.163 Sum_probs=135.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
..++++|||||++||.++++.|+++|.+|+...|+.....+....+.. ......+.++++|+.|..++.++.+
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 457999999999999999999999999999999954344434444433 3345678899999999999988876
Q ss_pred -cccEEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcc-cccCCCC
Q 026091 78 -GCTGVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVD-MLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~-~~~e~~~ 148 (243)
..|++||+||+... ...|..+..+.+|..|+..|.+...+ .. ..|||++||... ....... ...|...
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~--~~~~~~~~l~~~~~~ 189 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG--GGKIDLKDLSGEKAK 189 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc--cCccchhhccchhcc
Confidence 36999999998665 34567888999999998888776554 33 369999999764 1111111 1111110
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~ 200 (243)
. + .....|+.||.+.....++++++. |+.++.+.||.+.++...
T Consensus 190 ~---~-----~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~ 235 (314)
T KOG1208|consen 190 L---Y-----SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLS 235 (314)
T ss_pred C---c-----cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccccee
Confidence 0 0 011149999999999999998775 699999999999998433
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.8e-16 Score=124.56 Aligned_cols=184 Identities=24% Similarity=0.260 Sum_probs=128.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
++|+||||||++|++++++|+++|++|.+++| +++...... ..++++.+|+.+...+...+++.|.++++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r-~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i 70 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAAAALA---------GGVEVVLGDLRDPKSLVAGAKGVDGVLLI 70 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEe-CHHHHHhhc---------CCcEEEEeccCCHhHHHHHhccccEEEEE
Confidence 47999999999999999999999999999999 554332222 48899999999999999999999999998
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
.+... ... +. .........+..+.+. .+ +++++++|....... ....|.
T Consensus 71 ~~~~~-~~~-~~---~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~~------------------------~~~~~~ 119 (275)
T COG0702 71 SGLLD-GSD-AF---RAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADAA------------------------SPSALA 119 (275)
T ss_pred ecccc-ccc-ch---hHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCCC------------------------CccHHH
Confidence 77544 211 11 2222233344444444 34 678998887543211 114499
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhhc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~ 241 (243)
.+|...|..++. .|++++++|+..+|....... .........+... ..+..+++..+|++.++..
T Consensus 120 ~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~ 185 (275)
T COG0702 120 RAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAAF-------IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAA 185 (275)
T ss_pred HHHHHHHHHHHh----cCCCeEEEecCeeeeccchhH-------HHHHHhhCCceecCCCCceeeeEHHHHHHHHHH
Confidence 999999999987 699999999777776532211 1112222222122 2446799999999998654
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.5e-16 Score=123.20 Aligned_cols=174 Identities=21% Similarity=0.241 Sum_probs=127.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhcCCCCC-CCeEEEecCCCC-hhhHHHHhc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTNLPRAS-ERLQIFNADLNN-PESFDAAIA 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~~D~~d-~~~~~~~~~ 77 (243)
|..++|+|+||||++.||.++++.|++.|+.|+++.|+.... .+....... ..+ ..+.+...|+++ .+++..+++
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~ 78 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVA 78 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHH
Confidence 445678999999999999999999999999999998854431 112221111 111 367788899998 877777765
Q ss_pred -------cccEEEEeeeccC---C---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 -------GCTGVIHVAAPID---I---HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -------~~d~vi~~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||... . ...+.+...+++|+.+...+.+.+......++||++||.... ..+..
T Consensus 79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~----- 152 (251)
T COG1028 79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG----- 152 (251)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC-----
Confidence 3799999999753 2 334677889999999999988855544312299999997654 32110
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
...|+.||.+.+.+.+.++.+ +|++++.+.||.+-.+.
T Consensus 153 ----------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~ 193 (251)
T COG1028 153 ----------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM 193 (251)
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence 145999999999999988855 58999999999666553
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=127.07 Aligned_cols=198 Identities=19% Similarity=0.170 Sum_probs=137.4
Q ss_pred cCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--------cccE
Q 026091 12 GGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--------GCTG 81 (243)
Q Consensus 12 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~~d~ 81 (243)
|++ +.||++++++|++.|++|++.+|+.......+..+... .+.+.+.+|+++++++.++++ ++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE----YGAEVIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH----TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH----cCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 566 99999999999999999999999444322333333321 123469999999988888854 4799
Q ss_pred EEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 82 VIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 82 vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+||+++.... .+.+.+...++.|+.++..+++++.+.- +-.++|++||.+.....+
T Consensus 77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~-------------- 142 (241)
T PF13561_consen 77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP-------------- 142 (241)
T ss_dssp EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST--------------
T ss_pred EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc--------------
Confidence 9999986443 1234577888999999999988876541 125899999875322211
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.+|.+.+.+.+.++.+ +||+++.|.||.+..+..... .. ...+.+... ...++.
T Consensus 143 --------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~-~~~~~~~~~-~~~pl~----- 206 (241)
T PF13561_consen 143 --------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PG-NEEFLEELK-KRIPLG----- 206 (241)
T ss_dssp --------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HT-HHHHHHHHH-HHSTTS-----
T ss_pred --------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-cc-ccchhhhhh-hhhccC-----
Confidence 2236999999999999988765 489999999999998731110 00 111222221 222333
Q ss_pred CceeHHHHHHhhhccC
Q 026091 228 SMVHIDDVARAHIFFT 243 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++|+
T Consensus 207 r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 207 RLGTPEEVANAVLFLA 222 (241)
T ss_dssp SHBEHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHh
Confidence 6789999999998873
|
... |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-17 Score=117.77 Aligned_cols=204 Identities=16% Similarity=0.142 Sum_probs=146.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---CT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d 80 (243)
.+++|++||+.-.||+.+++.|++.|.+|+++.| .+.....+-. .. ...++.+++|+.+-+.+.+++-. +|
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR-~~a~L~sLV~--e~---p~~I~Pi~~Dls~wea~~~~l~~v~pid 79 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR-NEANLLSLVK--ET---PSLIIPIVGDLSAWEALFKLLVPVFPID 79 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEec-CHHHHHHHHh--hC---CcceeeeEecccHHHHHHHhhcccCchh
Confidence 4689999999999999999999999999999999 6644333221 11 12489999999998888888764 59
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
.++|+||..-. -.++++...++.|+.+..++.+...+. +....|+.+||.+......
T Consensus 80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~-------------- 145 (245)
T KOG1207|consen 80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLD-------------- 145 (245)
T ss_pred hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccC--------------
Confidence 99999986322 344556677888999888887764332 2235799999976432221
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
-.+.|..+|.+.+.+.+.++.+. .+++..+.|..++..........+-.. .+++ ...++. .
T Consensus 146 --------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~-k~mL--~riPl~-----r 209 (245)
T KOG1207|consen 146 --------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKK-KKML--DRIPLK-----R 209 (245)
T ss_pred --------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhc-cchh--hhCchh-----h
Confidence 12569999999999999999885 599999999999876544332221110 0111 112233 7
Q ss_pred ceeHHHHHHhhhccC
Q 026091 229 MVHIDDVARAHIFFT 243 (243)
Q Consensus 229 ~i~v~Dva~a~~~~~ 243 (243)
|..++++++|+++++
T Consensus 210 FaEV~eVVnA~lfLL 224 (245)
T KOG1207|consen 210 FAEVDEVVNAVLFLL 224 (245)
T ss_pred hhHHHHHHhhheeee
Confidence 889999999998874
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=120.90 Aligned_cols=216 Identities=16% Similarity=0.134 Sum_probs=153.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~ 79 (243)
...+|||||+-|.+|..++..|..+ |. .|+..+..++... .-+.-.++-.|+-|...+++++- .+
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----------V~~~GPyIy~DILD~K~L~eIVVn~RI 111 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----------VTDVGPYIYLDILDQKSLEEIVVNKRI 111 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----------hcccCCchhhhhhccccHHHhhccccc
Confidence 4579999999999999999988665 64 4554444233110 11234677889999999999973 59
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|.+||..+..+...+.....+.++|+.|..|+++.|++++ . ++...|+.++.++..+. .+- ++...+ -
T Consensus 112 dWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAFGPtSPR-NPT-----PdltIQ----R 179 (366)
T KOG2774|consen 112 DWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAFGPTSPR-NPT-----PDLTIQ----R 179 (366)
T ss_pred ceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-e-eEeecccccccCCCCCC-CCC-----CCeeee----c
Confidence 9999998865542223333678899999999999999998 4 67778888765433211 111 111122 2
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCC--CCCCcHHHHHHHHhcCcc--ccccccCcCceeHHHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICP--QLAGSVRGTLAMVMGNRE--EYSMLLNISMVHIDDV 235 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~Dv 235 (243)
|...||.||..+|.+-+.+..+.|+.+-++|.+.++.....+ ...+.+..+..++.+.+. .+..+....+.|..|+
T Consensus 180 PRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc 259 (366)
T KOG2774|consen 180 PRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDC 259 (366)
T ss_pred CceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHH
Confidence 556799999999999999988889999999999998863222 233445555566655543 3445888899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
-.+++.+
T Consensus 260 ~~~~~~~ 266 (366)
T KOG2774|consen 260 MASVIQL 266 (366)
T ss_pred HHHHHHH
Confidence 9887764
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=113.10 Aligned_cols=168 Identities=18% Similarity=0.192 Sum_probs=124.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+..+-+||||||+.+||..++++|.+.|.+|++.+| +......... ....+.-+.+|+.|.++.+++++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR-~e~~L~e~~~------~~p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGR-NEERLAEAKA------ENPEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC-cHHHHHHHHh------cCcchheeeecccchhhHHHHHHHHH
Confidence 6666679999999999999999999999999999999 5543333221 13478889999999988777765
Q ss_pred ----cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
..+++|||||+... ...+...+-+.+|+.++.+|..+..++- +-..+|.+||.-+ ..+..
T Consensus 74 k~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLa--fvPm~---- 147 (245)
T COG3967 74 KEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA--FVPMA---- 147 (245)
T ss_pred hhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccc--cCccc----
Confidence 36999999998554 1123334678889999999988776652 1347999998532 33211
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
..| .|..+|++...+...+.++ .++++.=+-|+.|-.+
T Consensus 148 --~~P--------------vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 148 --STP--------------VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred --ccc--------------cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 111 3999999988877666544 4799999999999885
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.5e-16 Score=123.39 Aligned_cols=196 Identities=18% Similarity=0.156 Sum_probs=128.4
Q ss_pred HHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----cccEEEEeeeccCCCCCCh
Q 026091 21 LIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GCTGVIHVAAPIDIHGKEP 96 (243)
Q Consensus 21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~a~~~~~~~~~~ 96 (243)
++++|+++|++|++++|+.. .. . ..+++++|++|.+++.++++ ++|+|||+||.... .+
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~-~~---~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~---~~ 63 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREP-GM---T----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT---AP 63 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcc-hh---h----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC---CC
Confidence 47889999999999999433 21 0 13567899999999998886 48999999997532 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCC---CCch---hhh-hhcCCCCchHHhhH
Q 026091 97 EEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETF---WSDV---DYI-RKLDIWGKSYKLSK 168 (243)
Q Consensus 97 ~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~---~~~~---~~~-~~~~~~~~~y~~sK 168 (243)
+...+++|+.++..+++.+.+.- ..++||++||.+.+.... ..+..|.. .+.. .+. ....+....|+.+|
T Consensus 64 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 141 (241)
T PRK12428 64 VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQ--RLELHKALAATASFDEGAAWLAAHPVALATGYQLSK 141 (241)
T ss_pred HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhcccc--chHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence 67899999999999999987651 136999999987653211 11111110 0000 000 01223446799999
Q ss_pred HHHHHHHHHHH-H---HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 169 TLAERAALEFA-E---EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 169 ~~~e~~~~~~~-~---~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+.+.+.++ . .+|+++++++||.+.++.........-. ........+. ..+...+|+|+++++++
T Consensus 142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~pe~va~~~~~l~ 212 (241)
T PRK12428 142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ---ERVDSDAKRM-----GRPATADEQAAVLVFLC 212 (241)
T ss_pred HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh---Hhhhhccccc-----CCCCCHHHHHHHHHHHc
Confidence 99999999888 3 3589999999999999853321110000 0000011111 14678899999988763
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-15 Score=113.66 Aligned_cols=177 Identities=20% Similarity=0.201 Sum_probs=127.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|.++||||+.+||.-|+++|++. |-++++..|++++.. ...+......+.+++.++.|+++.+++.++++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 678999999999999999999875 577777777567654 33333333357799999999999988877765
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cC--------C--ccEEEEEecceeee
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SG--------T--VKRVVYTSSASTVH 134 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~--~~~~i~~Ss~~~~~ 134 (243)
+.+.+|++||.... ..+..+.+.+++|..++..+.+.... .. + ...||++||.+..-
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 46899999997543 23344778899999888777654321 11 0 12689899865331
Q ss_pred cCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC
Q 026091 135 FSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 135 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~ 202 (243)
+. .. +.+...|..||.+.....+.++-+ .++-++.+.||+|-.......
T Consensus 161 ~~---~~----------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~ 212 (249)
T KOG1611|consen 161 GG---FR----------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK 212 (249)
T ss_pred CC---CC----------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence 11 00 113457999999999988887644 478899999999988755443
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=116.36 Aligned_cols=164 Identities=21% Similarity=0.242 Sum_probs=116.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------- 78 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------- 78 (243)
+++||||+|.||..+++.|++++ .+|++++|+..........+..+...+..++++++|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 58999999999999999999998 5899999952322222233333333466899999999999999999863
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
++.|||+|+.... .+.+.+...+...+.++.+|.+...... ++.+|.+||.+...+.+
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~---------------- 144 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGP---------------- 144 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-T----------------
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCc----------------
Confidence 5889999987543 3344566778888999999999988877 89999999988765553
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCce
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFV 194 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i 194 (243)
-...|+.+....+.+.+... ..|.++..+.-+.+
T Consensus 145 ------gq~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 145 ------GQSAYAAANAFLDALARQRR-SRGLPAVSINWGAW 178 (181)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred ------chHhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence 12459999999999888754 56899888876644
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.1e-15 Score=120.92 Aligned_cols=209 Identities=9% Similarity=-0.017 Sum_probs=128.2
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCC-------chhhchhhhhhcCCCCCC---------------Ce
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSD-------PEQKRDLSFLTNLPRASE---------------RL 59 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~---------------~~ 59 (243)
++|+++||||+ ..||+++++.|+++|++|++..|.. ............. ..+. ..
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKL-SNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccc-cccchhhhhhHHHhhhhcCCC
Confidence 57899999995 9999999999999999998866420 0000000000000 0000 11
Q ss_pred EEEecCCCC--------hhhHHHHhc-------cccEEEEeeeccC----C---CCCChHHHHHHHHHHHHHHHHHHHHh
Q 026091 60 QIFNADLNN--------PESFDAAIA-------GCTGVIHVAAPID----I---HGKEPEEVIIQRAVSGTIGILKSCLK 117 (243)
Q Consensus 60 ~~~~~D~~d--------~~~~~~~~~-------~~d~vi~~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~~~~~ 117 (243)
+-+..|+++ .++++++++ ++|++|||||... . .+.+++...+++|+.++.++++++.+
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 222222222 113444443 4899999997532 1 23456778899999999999988776
Q ss_pred cC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc-hHHhhHHHHHHHHHHHHHH----cCccEEEEcc
Q 026091 118 SG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK-SYKLSKTLAERAALEFAEE----HGLDLVTIIP 191 (243)
Q Consensus 118 ~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp 191 (243)
.- .-.++|++||.......+ ... .|+.+|.+.+.+.+.++.+ +||+++.+.|
T Consensus 166 ~m~~~G~ii~iss~~~~~~~p----------------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~P 223 (299)
T PRK06300 166 IMNPGGSTISLTYLASMRAVP----------------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISA 223 (299)
T ss_pred HhhcCCeEEEEeehhhcCcCC----------------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEe
Confidence 52 125799998865432221 112 5999999999999998875 3899999999
Q ss_pred CceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 192 SFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 192 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
|.+..+..... .. ........... .+.. .+...+|+++++++++
T Consensus 224 G~v~T~~~~~~-~~-~~~~~~~~~~~-~p~~-----r~~~peevA~~v~~L~ 267 (299)
T PRK06300 224 GPLASRAGKAI-GF-IERMVDYYQDW-APLP-----EPMEAEQVGAAAAFLV 267 (299)
T ss_pred CCccChhhhcc-cc-cHHHHHHHHhc-CCCC-----CCcCHHHHHHHHHHHh
Confidence 99988743211 00 01111111111 1122 5678899999988763
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.7e-16 Score=116.02 Aligned_cols=168 Identities=20% Similarity=0.166 Sum_probs=126.2
Q ss_pred CCCeEEEecC-chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGG-TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
..|+|||||+ .|+||.+++++|.+.|+.|.+..|+.+ ....|.. ..++.....|+++++.+.++..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e----~M~~L~~----~~gl~~~kLDV~~~~~V~~v~~evr~~ 77 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLE----PMAQLAI----QFGLKPYKLDVSKPEEVVTVSGEVRAN 77 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccc----hHhhHHH----hhCCeeEEeccCChHHHHHHHHHHhhC
Confidence 4688999886 599999999999999999999999444 2222321 2378999999999998887754
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+.|.+||+||.... ....+....+++|+-|..+..++....- ..+.||+++|..++.+.+
T Consensus 78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp---------- 147 (289)
T KOG1209|consen 78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP---------- 147 (289)
T ss_pred CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc----------
Confidence 36999999986433 2334455678889888777776655431 125899999988775553
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICP 201 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~ 201 (243)
+.+.|..||++...+.+.+.-+ .|++++.+-+|+|-..-.+.
T Consensus 148 ------------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 148 ------------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred ------------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 4567999999999988876433 49999999999998764444
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-16 Score=117.35 Aligned_cols=170 Identities=23% Similarity=0.219 Sum_probs=126.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|..++|++++||+.|+||+.++++|+++|..+.++.- +.+..+....|.+. .+...+.|+++|+++..++++++++
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~-~~En~~a~akL~ai-~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDD-SEENPEAIAKLQAI-NPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehh-hhhCHHHHHHHhcc-CCCceEEEEEeccccHHHHHHHHHHHH
Confidence 5667899999999999999999999999988877776 44444444444432 2345789999999999888888873
Q ss_pred -----ccEEEEeeeccCCCCCChHHHHHHHHHHHHHH----HHHHHHhc--CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 -----CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIG----ILKSCLKS--GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 -----~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~----l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||.||.... .+++..+.+|+.+..+ .+.++.+. |+-.-+|..||..+..+.+
T Consensus 79 ~~fg~iDIlINgAGi~~d---kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p---------- 145 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDD---KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP---------- 145 (261)
T ss_pred HHhCceEEEEcccccccc---hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc----------
Confidence 6999999998775 5577889999766444 45555443 3345799999975443331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHH-----HHcCccEEEEccCceeCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFA-----EEHGLDLVTIIPSFVTGP 197 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~-----~~~gi~~~~~rp~~i~G~ 197 (243)
-...|+.||.-.-.+.|+++ ++.|+++..+.||.+-..
T Consensus 146 ------------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~ 188 (261)
T KOG4169|consen 146 ------------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD 188 (261)
T ss_pred ------------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH
Confidence 12359999987776666644 335999999999998764
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.5e-15 Score=145.66 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=132.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchh-----h----------------------------------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQ-----K---------------------------------- 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~-----~---------------------------------- 43 (243)
+.++++||||+|+||..++++|+++ |++|++++|+.... .
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 3579999999999999999999998 69999999951100 0
Q ss_pred -----chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------cccEEEEeeeccCC-----CCCChHHHHHHHHHHH
Q 026091 44 -----RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSG 107 (243)
Q Consensus 44 -----~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~ 107 (243)
+....+......+..+.++.+|++|.+++.++++ ++|.|||+||.... .+.+.+...+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0000011111235578999999999998888876 37999999997543 3456788899999999
Q ss_pred HHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-CccE
Q 026091 108 TIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-GLDL 186 (243)
Q Consensus 108 ~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-gi~~ 186 (243)
+.++++++.... .++||++||..+..+.. ....|+.+|...+.+.+.++.++ ++++
T Consensus 2156 ~~~Ll~al~~~~-~~~IV~~SSvag~~G~~----------------------gqs~YaaAkaaL~~la~~la~~~~~irV 2212 (2582)
T TIGR02813 2156 LLSLLAALNAEN-IKLLALFSSAAGFYGNT----------------------GQSDYAMSNDILNKAALQLKALNPSAKV 2212 (2582)
T ss_pred HHHHHHHHHHhC-CCeEEEEechhhcCCCC----------------------CcHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 999999998876 67899999987654442 12349999999999998887765 6999
Q ss_pred EEEccCceeCCC
Q 026091 187 VTIIPSFVTGPF 198 (243)
Q Consensus 187 ~~~rp~~i~G~~ 198 (243)
+.+.||.+-|+.
T Consensus 2213 ~sI~wG~wdtgm 2224 (2582)
T TIGR02813 2213 MSFNWGPWDGGM 2224 (2582)
T ss_pred EEEECCeecCCc
Confidence 999999987764
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=114.36 Aligned_cols=171 Identities=18% Similarity=0.152 Sum_probs=128.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------- 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------- 78 (243)
.+|+|||++..+|..++..+..+|++|+++.| +......+...-++.....++.+..+|+.|.+++..++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar-~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITAR-SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEec-cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 47999999999999999999999999999999 5544444433333322233488999999999999988874
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-C---ccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-T---VKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~---~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|.++||||..-. .+....+..+++|..++.|+++++.... . ..+|+.+||..+..+-.
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~------------ 180 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY------------ 180 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc------------
Confidence 5999999986433 4455677899999999999988766542 1 23899998865443321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
.-+.|+.+|.+...+...+.++ +++.++...|+.+-.|+.
T Consensus 181 ----------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGf 223 (331)
T KOG1210|consen 181 ----------GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGF 223 (331)
T ss_pred ----------cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcc
Confidence 1244888888777766666555 589999999999999853
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-14 Score=112.09 Aligned_cols=166 Identities=25% Similarity=0.258 Sum_probs=125.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
..|.|||||+-...|..++++|.++|+.|.+-.- .+...+.+..... .+++.-++.|+++++++.++.+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl-~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCL-TEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEee-cCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 3577999999999999999999999999999986 4433333332221 4588889999999999999876
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+.-.||||||+... ...+++...+++|+.|+.++..+.. ++. +|+|++||.++-...
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~-------- 172 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVAL-------- 172 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccC--------
Confidence 34689999995432 3456677899999999888766544 443 699999997642221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
|...+|..||.+.|.+...+.++ +|+++.++-||.+-.+.
T Consensus 173 --------------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l 215 (322)
T KOG1610|consen 173 --------------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL 215 (322)
T ss_pred --------------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence 12345999999999998887655 59999999999555543
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.2e-15 Score=106.66 Aligned_cols=160 Identities=15% Similarity=0.135 Sum_probs=121.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+++..+|.||||-.|+-+++++.+.+ .+|+++.|+.+... ..+..+..+..|....+++.....++|+
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----------at~k~v~q~~vDf~Kl~~~a~~~qg~dV 86 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----------ATDKVVAQVEVDFSKLSQLATNEQGPDV 86 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----------cccceeeeEEechHHHHHHHhhhcCCce
Confidence 36789999999999999999999998 58999999543221 1244677788898888888888899999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
.+++-|......- ..-++.+.-.....+.++|++.| +++|+.+||.+....+ .
T Consensus 87 ~FcaLgTTRgkaG--adgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS------------------------r 139 (238)
T KOG4039|consen 87 LFCALGTTRGKAG--ADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS------------------------R 139 (238)
T ss_pred EEEeecccccccc--cCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc------------------------c
Confidence 9999887665221 11334444445667889999999 9999999997642111 1
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL 203 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~ 203 (243)
.-|.+.|...|.-+.++.=+ .+.|+|||.+.|.......
T Consensus 140 FlY~k~KGEvE~~v~eL~F~---~~~i~RPG~ll~~R~esr~ 178 (238)
T KOG4039|consen 140 FLYMKMKGEVERDVIELDFK---HIIILRPGPLLGERTESRQ 178 (238)
T ss_pred eeeeeccchhhhhhhhcccc---EEEEecCcceecccccccc
Confidence 34999999999988876433 5899999999998766553
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.8e-14 Score=106.85 Aligned_cols=198 Identities=18% Similarity=0.143 Sum_probs=141.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
.+.++.|+.||.|+++|+.....++.|..+.|+.. .... .+|...+.|+++|.....-+...+.++..++-+
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~-k~~l-------~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~ 124 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN-KQTL-------SSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEM 124 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC-cchh-------hCCCcccchhhccccccCcchhhhcCCcccHHH
Confidence 47889999999999999999999999999999432 1111 124567899999998888888888888888877
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
++.... ...+...|-....+.+++++++| +++|+|+|... ++.+ .. .| ..|.
T Consensus 125 ~ggfgn-----~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d--~~~~-~~------------------i~-rGY~ 176 (283)
T KOG4288|consen 125 MGGFGN-----IILMDRINGTANINAVKAAAKAG-VPRFVYISAHD--FGLP-PL------------------IP-RGYI 176 (283)
T ss_pred hcCccc-----hHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh--cCCC-Cc------------------cc-hhhh
Confidence 765332 23566677777788899999999 99999999742 1111 00 01 2599
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcH-------HHHHHHHhcC--ccccccccCcCceeHHHHH
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSV-------RGTLAMVMGN--REEYSMLLNISMVHIDDVA 236 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~i~v~Dva 236 (243)
.+|.++|.-+.. .++.+-.++|||++||.+.-..+..++ .+..+...+. +.++-+.-...++.++++|
T Consensus 177 ~gKR~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA 253 (283)
T KOG4288|consen 177 EGKREAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVA 253 (283)
T ss_pred ccchHHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHH
Confidence 999999987766 467899999999999985444433222 2222222111 1222234567999999999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
.+.+.+
T Consensus 254 ~aal~a 259 (283)
T KOG4288|consen 254 LAALKA 259 (283)
T ss_pred HHHHHh
Confidence 998765
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=114.16 Aligned_cols=167 Identities=25% Similarity=0.256 Sum_probs=108.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~---- 78 (243)
++++|+|+||||.+|+-+++.|+++|+.|.+++|+.....+... ....+...+.+..|.... +.+..+.+.
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~----~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG----VFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc----ccccccccceeeeccccccchhhhhhhhcccc
Confidence 45789999999999999999999999999999995544333322 122234666777665544 344444433
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
..+++-+++--... ++...-+.+...+++|++++|+.+| ++|++++|+.++--... ..|.- .
T Consensus 154 ~~~v~~~~ggrp~~--ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~--------~~~~~--~----- 215 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEE--EDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQ--------PPNIL--L----- 215 (411)
T ss_pred ceeEEecccCCCCc--ccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCC--------Cchhh--h-----
Confidence 23444444432221 1111335667889999999999999 99999999865321111 00000 0
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCC
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGP 197 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~ 197 (243)
...-+..+|..+|..+++ .|++++|+||+...-.
T Consensus 216 -~~~~~~~~k~~~e~~~~~----Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 216 -LNGLVLKAKLKAEKFLQD----SGLPYTIIRPGGLEQD 249 (411)
T ss_pred -hhhhhhHHHHhHHHHHHh----cCCCcEEEeccccccC
Confidence 011245777777776654 7999999999998764
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.8e-13 Score=105.46 Aligned_cols=173 Identities=16% Similarity=0.120 Sum_probs=122.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh----HHHHhcc--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES----FDAAIAG-- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~~-- 78 (243)
++...|||||..||++.+++|+++|.+|++++| +.++.+.....-... ..-.+.++..|.++++. +.+.+.+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsR-t~~KL~~v~kEI~~~-~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISR-TQEKLEAVAKEIEEK-YKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHHH-hCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 367999999999999999999999999999999 665554444332211 12357889999987764 5555555
Q ss_pred ccEEEEeeeccCCC-------CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 CTGVIHVAAPIDIH-------GKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 ~d~vi~~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+-++|||+|..... +.......+.+|+.++..+.+... +.+ -+-|+++||.+...+.+
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p---------- 195 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTP---------- 195 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccCh----------
Confidence 45799999986631 111233556667777666655443 333 45799999976543331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~ 202 (243)
.-+.|+.+|...+.+.+.+.+++ ||.+-.+-|..|-++.....
T Consensus 196 ------------~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~ 241 (312)
T KOG1014|consen 196 ------------LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR 241 (312)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence 22469999999999888887764 89999999999988754433
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-12 Score=104.75 Aligned_cols=178 Identities=16% Similarity=0.051 Sum_probs=123.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+|+||.|+|++|.||+.++..|+.++ .++.++++ ..... ....+.+. .. .....+.+|+.++.+.++++|+
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g-~a~Dl~~~---~~--~~~v~~~td~~~~~~~l~gaDv 79 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPG-VAADLSHI---DT--PAKVTGYADGELWEKALRGADL 79 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCcc-cccchhhc---Cc--CceEEEecCCCchHHHhCCCCE
Confidence 67899999999999999999998655 68888888 33211 11111111 11 2334566676677788899999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||++||...... ..+.+.+..|+..+.++++++++++ ++++|+++|..+.....-....+.+... -||.
T Consensus 80 VVitaG~~~~~~-~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg---------~p~~ 148 (321)
T PTZ00325 80 VLICAGVPRKPG-MTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGV---------YDPR 148 (321)
T ss_pred EEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccC---------CChh
Confidence 999999854422 3456899999999999999999999 9999999996543222100000011111 1344
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
..||.+-...-++-..+++..+++...++ +.|+|.+..
T Consensus 149 ~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 149 KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 56888755666666677888899999998 999998766
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.3e-12 Score=96.99 Aligned_cols=170 Identities=15% Similarity=0.088 Sum_probs=116.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|.||+||++..||.-++..+.+.+.++....+.+.... .+.+... .++......+|+...+.+.++.+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~--~gd~~v~~~g~~~e~~~l~al~e~~r~k~ 80 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVA--YGDDFVHVVGDITEEQLLGALREAPRKKG 80 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEE--ecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence 4578999999999999999888888765444444222211 2211110 12333445556655554444432
Q ss_pred -cccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHHhc--CC--ccEEEEEecceeeecCCCCccccc
Q 026091 78 -GCTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCLKS--GT--VKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+-|.||||||...+ ...+.|...|+.|+-+...|...+.+. ++ .+.+|++||.+.+.+....
T Consensus 81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w----- 155 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW----- 155 (253)
T ss_pred CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH-----
Confidence 36999999997543 345678899999999999988877665 22 2679999997655443211
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-c-CccEEEEccCceeCCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-H-GLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~-gi~~~~~rp~~i~G~~~ 199 (243)
..|+.+|++.+.+.+.++.+ + ++++..++||.+-.+.+
T Consensus 156 -----------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq 195 (253)
T KOG1204|consen 156 -----------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ 195 (253)
T ss_pred -----------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence 25999999999999999855 3 89999999999988743
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=91.89 Aligned_cols=84 Identities=18% Similarity=0.137 Sum_probs=63.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||.++++.|++.|++|.+++|+.+........+.. .+....++.+|+++.+++.++++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN---LGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999843322111122221 23457788999999988887653
Q ss_pred -cccEEEEeeeccC
Q 026091 78 -GCTGVIHVAAPID 90 (243)
Q Consensus 78 -~~d~vi~~a~~~~ 90 (243)
++|++||+||...
T Consensus 92 G~iDilVnnAG~~~ 105 (169)
T PRK06720 92 SRIDMLFQNAGLYK 105 (169)
T ss_pred CCCCEEEECCCcCC
Confidence 4899999998754
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.8e-11 Score=92.04 Aligned_cols=186 Identities=17% Similarity=0.146 Sum_probs=128.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-----eEEEEEeCCchhhchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-----SVRTTVRSDPEQKRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
+.|.++|||+++++|.++|.+|++..- .+.+..|+.+...+--..+.+ .+...-+++++..|+++..++.++.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 367899999999999999999998753 466667855544444444443 34344578999999999988887765
Q ss_pred -------cccEEEEeeeccCC--------------------------------CCCChHHHHHHHHHHHHHHHHHHHHhc
Q 026091 78 -------GCTGVIHVAAPIDI--------------------------------HGKEPEEVIIQRAVSGTIGILKSCLKS 118 (243)
Q Consensus 78 -------~~d~vi~~a~~~~~--------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (243)
..|.|+.+||+... .+.|...+.+++|+-|..-++....+.
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 46999999975332 235778899999999999998877664
Q ss_pred ---CCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccC
Q 026091 119 ---GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPS 192 (243)
Q Consensus 119 ---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~ 192 (243)
+....+|++||...--.+ ++ ..|.. +.....+|..||.+.+-+.-...+. .|+.-.++.||
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~------ls---leD~q----~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg 228 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKN------LS---LEDFQ----HSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPG 228 (341)
T ss_pred hhcCCCCeEEEEeeccccccc------CC---HHHHh----hhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCc
Confidence 223489999996532111 10 11111 1122346999999988776655433 37888899998
Q ss_pred ceeCCCCCCC
Q 026091 193 FVTGPFICPQ 202 (243)
Q Consensus 193 ~i~G~~~~~~ 202 (243)
..........
T Consensus 229 ~~tt~~~~~~ 238 (341)
T KOG1478|consen 229 IFTTNSFSEY 238 (341)
T ss_pred eeecchhhhh
Confidence 8877654433
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.6e-12 Score=93.43 Aligned_cols=169 Identities=21% Similarity=0.230 Sum_probs=120.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+....+||||...+|++.++.|+++|..|.+++-.++...+..+++ ++++.|...|++++.+++.++.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 3457899999999999999999999999999988444444444333 5689999999999998888875
Q ss_pred -cccEEEEeeeccCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEEecceeeecC
Q 026091 78 -GCTGVIHVAAPIDI-----------HGKEPEEVIIQRAVSGTIGILKSCLKS---------GTVKRVVYTSSASTVHFS 136 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~i~~Ss~~~~~~~ 136 (243)
..|+.+||||+... ..-++++..+++|+.++.|+++...-. |.-..+|.+.|.+.+.+.
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq 161 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ 161 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence 36999999986321 233556778889999999998864321 211246666665543332
Q ss_pred CCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC
Q 026091 137 GKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 137 ~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~ 200 (243)
. ....|+.||.+.--+..-.+.+ .|++++.+.||.+-.|...
T Consensus 162 ~----------------------gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls 206 (260)
T KOG1199|consen 162 T----------------------GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS 206 (260)
T ss_pred c----------------------chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh
Confidence 1 1245999998655444333333 3899999999988877543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=98.02 Aligned_cols=175 Identities=15% Similarity=0.036 Sum_probs=119.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++||.|+||+|.+|+.++..|+.++ .++.++++ .+ .......+.+. .......++.+.+++.+.++++|+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di-~~-~~g~a~Dl~~~-----~~~~~i~~~~~~~d~~~~l~~aDiV 90 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDI-AN-TPGVAADVSHI-----NTPAQVRGFLGDDQLGDALKGADLV 90 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEec-CC-CCeeEchhhhC-----CcCceEEEEeCCCCHHHHcCCCCEE
Confidence 4699999999999999999998766 47888888 33 11111111111 1112333555566788899999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+||..... ...+.+.+..|...+.++.+.+++++ .+.+++++|--+....+-....+.+.. ..||..
T Consensus 91 VitAG~~~~~-g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s---------~~p~~~ 159 (323)
T PLN00106 91 IIPAGVPRKP-GMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAG---------VYDPKK 159 (323)
T ss_pred EEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcC---------CCCcce
Confidence 9999975542 24467899999999999999999999 888888888432100000000000111 113456
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
.||.++...+++-..++++.|++...++ +.|+|.+
T Consensus 160 viG~~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 160 LFGVTTLDVVRANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred EEEEecchHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence 7999999999999999999999998885 5555554
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.8e-09 Score=81.33 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=132.8
Q ss_pred CCCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 3 EEKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 3 ~~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
++.|++||+|- ...|+..+++.|.++|.++..... .+.-..+...+... -..-..+++|+++.+++..+++
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~-~e~l~krv~~la~~---~~s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GERLEKRVEELAEE---LGSDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHHHhh---ccCCeEEecCCCCHHHHHHHHHHHH
Confidence 36899999985 457999999999999999887777 54444444444331 2234678999999998888876
Q ss_pred ----cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|.+||+-|..+. .+.+.+...+++...+...+.++++..- .-..++-++ |.+.. ..+
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~---r~v 152 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSE---RVV 152 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccce---eec
Confidence 47999999986542 3455666677777777777777777642 123454443 22221 000
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
|--|..+.+|.+.|.-+|.++.+. |+|++.+-.|.|-.--.... .. ++.+++-.... -+
T Consensus 153 ---------------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~-f~~~l~~~e~~-aP 214 (259)
T COG0623 153 ---------------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GD-FRKMLKENEAN-AP 214 (259)
T ss_pred ---------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-cc-HHHHHHHHHhh-CC
Confidence 111568999999999999998774 78888888777654211111 11 22222222111 22
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. ..+..+||.+...+|
T Consensus 215 l~-----r~vt~eeVG~tA~fL 231 (259)
T COG0623 215 LR-----RNVTIEEVGNTAAFL 231 (259)
T ss_pred cc-----CCCCHHHhhhhHHHH
Confidence 32 667788888876665
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.7e-10 Score=83.51 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=73.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------- 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------- 78 (243)
|+++||||||++|. +++.|++.|++|.+++| ++.....+.. ..+ ....+.++.+|+.|.+++.+++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R-~~~~~~~l~~--~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~ 75 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIAR-REVKLENVKR--EST-TPESITPLPLDYHDDDALKLAIKSTIEKNGP 75 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEEC-CHHHHHHHHH--Hhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 37999999998876 99999999999999999 4433222211 111 134688899999999999888763
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc----EEEEEec
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK----RVVYTSS 129 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~i~~Ss 129 (243)
+|.+|+..- ..++.++.++|++.+ ++ +|+|+=+
T Consensus 76 id~lv~~vh-----------------~~~~~~~~~~~~~~g-v~~~~~~~~h~~g 112 (177)
T PRK08309 76 FDLAVAWIH-----------------SSAKDALSVVCRELD-GSSETYRLFHVLG 112 (177)
T ss_pred CeEEEEecc-----------------ccchhhHHHHHHHHc-cCCCCceEEEEeC
Confidence 466665432 224678999999999 88 8888743
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.5e-10 Score=90.90 Aligned_cols=179 Identities=15% Similarity=0.033 Sum_probs=106.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-------CeEEEEEeCCchhhchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-------YSVRTTVRSDPEQKRDLSFLT-NLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
+.||+||||+|++|++++..|+..+ .+|.+++|+.... .+.... ++ .+.......|+....++.+.+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g~~~Dl---~d~~~~~~~~~~~~~~~~~~l 76 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEGVVMEL---QDCAFPLLKSVVATTDPEEAF 76 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccceeeeh---hhccccccCCceecCCHHHHh
Confidence 5689999999999999999998854 4899999833211 111000 00 001112233555567788888
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhh
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIR 155 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~ 155 (243)
+++|+|||+||...... .+..+.++.|+.-...+....+++. +-..++.+|...-. -...+-+.....
T Consensus 77 ~~aDiVI~tAG~~~~~~-~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~-----~t~~~~k~~~~~----- 145 (325)
T cd01336 77 KDVDVAILVGAMPRKEG-MERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANT-----NALILLKYAPSI----- 145 (325)
T ss_pred CCCCEEEEeCCcCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHH-----HHHHHHHHcCCC-----
Confidence 99999999999865432 3346899999999999988888884 22345555532100 000011111000
Q ss_pred hcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 156 KLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
|+...=..+....-++-..+++..+++...++-..|+|......
T Consensus 146 ---~~~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s~ 189 (325)
T cd01336 146 ---PKENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSSTQ 189 (325)
T ss_pred ---CHHHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCCe
Confidence 00000111223334444456677789888888888999865544
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.7e-09 Score=85.72 Aligned_cols=86 Identities=15% Similarity=0.067 Sum_probs=61.0
Q ss_pred CCCeEEEecCchhhHHH--HHHHHHHcCCeEEEEEeCCchhhch--------hhhhh-cCCCCCCCeEEEecCCCChhhH
Q 026091 4 EKGRVCVTGGTGFIGSW--LIMRLLDHGYSVRTTVRSDPEQKRD--------LSFLT-NLPRASERLQIFNADLNNPESF 72 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~D~~d~~~~ 72 (243)
.+|++|||||++.+|.+ ++++| +.|++|+++++........ ...+. .....+..+..+.+|+++.+++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 45899999999999999 89999 9999998888632211100 01111 1111234567899999999888
Q ss_pred HHHhc-------cccEEEEeeeccC
Q 026091 73 DAAIA-------GCTGVIHVAAPID 90 (243)
Q Consensus 73 ~~~~~-------~~d~vi~~a~~~~ 90 (243)
.++++ ++|++||++|...
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccCC
Confidence 77765 4799999998753
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.9e-10 Score=92.49 Aligned_cols=91 Identities=26% Similarity=0.391 Sum_probs=72.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|++|+|+|| |+||+.++..|+++| .+|++.+| +.+...++... ...+++..+.|+.|.+++.+++++.|+||
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR-s~~~~~~i~~~-----~~~~v~~~~vD~~d~~al~~li~~~d~VI 73 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR-SKEKCARIAEL-----IGGKVEALQVDAADVDALVALIKDFDLVI 73 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHhh-----ccccceeEEecccChHHHHHHHhcCCEEE
Confidence 578999996 999999999999998 99999999 65444444322 12389999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
|++.+... .+++++|.++|
T Consensus 74 n~~p~~~~-----------------~~i~ka~i~~g 92 (389)
T COG1748 74 NAAPPFVD-----------------LTILKACIKTG 92 (389)
T ss_pred EeCCchhh-----------------HHHHHHHHHhC
Confidence 99754222 26667777777
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=84.51 Aligned_cols=175 Identities=13% Similarity=0.037 Sum_probs=114.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCch--hhchhhhhhcCC-CCCCCeEEEecCCCChhhHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPE--QKRDLSFLTNLP-RASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++||.|+||+|.+|++++..|+..|. ++.++++.... .......+.+.. ....++++ + ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHH
Confidence 57999999999999999999998773 68888873221 111111111110 00011221 1 12245
Q ss_pred HhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 75 AIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
.++++|+||.+||..... .....+.++.|..-...+....+++++ -..+|.+|-..-.-. ....... .
T Consensus 75 ~~~daDivvitaG~~~k~-g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t----~~~~k~s-g----- 143 (322)
T cd01338 75 AFKDADWALLVGAKPRGP-GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA----LIAMKNA-P----- 143 (322)
T ss_pred HhCCCCEEEEeCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH----HHHHHHc-C-----
Confidence 677899999999975443 234568899999999999999998872 345555553210000 0000111 0
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
.-|+...|+.++...+++...+++..|++...+|..+|||+...
T Consensus 144 ---~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 144 ---DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred ---CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 01244569999999999999999999999999999999999754
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-09 Score=81.19 Aligned_cols=81 Identities=23% Similarity=0.277 Sum_probs=57.7
Q ss_pred CCCeEEEecCc----------------hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGGT----------------GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
.+|+||||+|. ||+|++++++|+++|++|+++.+......... + ....+..+..|..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~------~-~~~~~~~V~s~~d 74 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI------N-NQLELHPFEGIID 74 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc------C-CceeEEEEecHHH
Confidence 47899999886 99999999999999999999987221111000 0 0123455666555
Q ss_pred ChhhHHHHhc--cccEEEEeeeccCC
Q 026091 68 NPESFDAAIA--GCTGVIHVAAPIDI 91 (243)
Q Consensus 68 d~~~~~~~~~--~~d~vi~~a~~~~~ 91 (243)
..+.+.++++ ++|+|||+||....
T Consensus 75 ~~~~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 75 LQDKMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHHHHHHhcccCCCEEEECccccce
Confidence 5578888885 68999999998544
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=77.71 Aligned_cols=198 Identities=15% Similarity=0.030 Sum_probs=114.4
Q ss_pred CeEEEecCchhhHHHHHH-----HHHHcC----CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 6 GRVCVTGGTGFIGSWLIM-----RLLDHG----YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
...+.-+++|+|+..|.. ++-..+ |+|++++| .+... +++|-..|..-...
T Consensus 13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR-~pg~~--------------ritw~el~~~Gip~----- 72 (315)
T KOG3019|consen 13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSR-SPGKA--------------RITWPELDFPGIPI----- 72 (315)
T ss_pred ccCCCCccccchhccccCcccccccCCCCcccccceEEEec-CCCCc--------------ccccchhcCCCCce-----
Confidence 457777899999987765 554444 89999999 65332 44444444332210
Q ss_pred ccccEEEEeeec----cCCCCC-ChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 77 AGCTGVIHVAAP----IDIHGK-EPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 77 ~~~d~vi~~a~~----~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
.|++.+|.++. .-..+. .-.++.+.+.+..+..|.++..++-. .+.+|.+|..++|-.+ ....++|+.+..
T Consensus 73 -sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS--~s~eY~e~~~~q 149 (315)
T KOG3019|consen 73 -SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPS--ESQEYSEKIVHQ 149 (315)
T ss_pred -ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccc--cccccccccccC
Confidence 23333444432 111222 22345666778889999998887642 3579999998766443 456677776432
Q ss_pred hhhhhhcCCCCchHHhhHHH--HHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 151 VDYIRKLDIWGKSYKLSKTL--AERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~--~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
. .-|.. +.- =|..... +. ..++.+++|.|.|.|.+..... .+....+...|.+. -.+++.++
T Consensus 150 g----------fd~~s-rL~l~WE~aA~~-~~-~~~r~~~iR~GvVlG~gGGa~~--~M~lpF~~g~GGPl-GsG~Q~fp 213 (315)
T KOG3019|consen 150 G----------FDILS-RLCLEWEGAALK-AN-KDVRVALIRIGVVLGKGGGALA--MMILPFQMGAGGPL-GSGQQWFP 213 (315)
T ss_pred C----------hHHHH-HHHHHHHHHhhc-cC-cceeEEEEEEeEEEecCCcchh--hhhhhhhhccCCcC-CCCCeeee
Confidence 1 11211 111 1222211 11 2489999999999998754331 11122233333332 22477889
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
|||++|++..+..+
T Consensus 214 WIHv~DL~~li~~a 227 (315)
T KOG3019|consen 214 WIHVDDLVNLIYEA 227 (315)
T ss_pred eeehHHHHHHHHHH
Confidence 99999999987654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.1e-08 Score=77.95 Aligned_cols=68 Identities=21% Similarity=0.270 Sum_probs=48.2
Q ss_pred CchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHhccccEEEEeeeccC
Q 026091 13 GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAIAGCTGVIHVAAPID 90 (243)
Q Consensus 13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~a~~~~ 90 (243)
+||++|++++++|+++|++|+++.| ...... ....+++++.++..+ .+.+.+.++++|+|||+||...
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r-~~~~~~---------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTT-KTAVKP---------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEEC-cccccC---------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 4899999999999999999999988 321110 001256666544322 3566667778999999999865
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=78.01 Aligned_cols=171 Identities=16% Similarity=0.080 Sum_probs=103.5
Q ss_pred CeEEEecCchhhHHHHHHHHHH-c--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLD-H--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
|||+|+||+|.+|++++..|.. . ++++.+++| ++........+... .....+.+ .+.+++.+.++++|+|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~-~~~~~g~alDl~~~----~~~~~i~~--~~~~d~~~~l~~~DiV 73 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDI-APVTPGVAVDLSHI----PTAVKIKG--FSGEDPTPALEGADVV 73 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEec-CCCCcceehhhhcC----CCCceEEE--eCCCCHHHHcCCCCEE
Confidence 4899999999999999988854 2 467777777 33211111111110 11122333 2344556677899999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccc-----cCCCCCchhhhhhc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDML-----DETFWSDVDYIRKL 157 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~-----~e~~~~~~~~~~~~ 157 (243)
|.++|...... ....+.+..|......+++.+++++ .++++.+.|-=+ .--...+ ....+
T Consensus 74 IitaG~~~~~~-~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~----D~~t~~~~~~~~~~sg~--------- 138 (312)
T PRK05086 74 LISAGVARKPG-MDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPV----NTTVAIAAEVLKKAGVY--------- 138 (312)
T ss_pred EEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCch----HHHHHHHHHHHHHhcCC---------
Confidence 99999765433 3355889999999999999999998 888887776311 0000000 00000
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
|+.-..+..-...-++-..+++..+++..-++ +.++|....
T Consensus 139 -p~~rvig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg~ 179 (312)
T PRK05086 139 -DKNKLFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHSG 179 (312)
T ss_pred -CHHHEEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEecCC
Confidence 01112233323334555556677788888887 888998633
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.6e-08 Score=83.90 Aligned_cols=76 Identities=33% Similarity=0.582 Sum_probs=56.9
Q ss_pred EEEecCchhhHHHHHHHHHHcC-C-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHG-Y-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|.|| |++|+.+++.|++.+ . +|++.+| +.+....+... . ...++++++.|+.|.+++.++++++|+|||+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r-~~~~~~~~~~~--~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR-NPEKAERLAEK--L--LGDRVEAVQVDVNDPESLAELLRGCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEES-SHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC-CHHHHHHHHhh--c--cccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence 789999 999999999999986 4 8999999 55433222210 0 2458999999999999999999999999999
Q ss_pred eecc
Q 026091 86 AAPI 89 (243)
Q Consensus 86 a~~~ 89 (243)
+++.
T Consensus 75 ~gp~ 78 (386)
T PF03435_consen 75 AGPF 78 (386)
T ss_dssp SSGG
T ss_pred Cccc
Confidence 9875
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=77.12 Aligned_cols=167 Identities=14% Similarity=0.051 Sum_probs=102.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcC-------CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh----------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG-------YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---------- 69 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---------- 69 (243)
||.|+||+|.+|++++..|+..+ +++.+++++... +..+....|+.|.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------------~~~~g~~~Dl~d~~~~~~~~~~i 66 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------------KALEGVVMELQDCAFPLLKGVVI 66 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------------CccceeeeehhhhcccccCCcEE
Confidence 79999999999999999998765 248888883310 0122223333332
Q ss_pred -hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 70 -ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 70 -~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
....+.++++|+|||+||..... .+...+.+..|..-...+....+++ ++-..++.+|-..-.-. ........
T Consensus 67 ~~~~~~~~~~aDiVVitAG~~~~~-g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t----~~~~k~sg 141 (323)
T cd00704 67 TTDPEEAFKDVDVAILVGAFPRKP-GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNA----LIALKNAP 141 (323)
T ss_pred ecChHHHhCCCCEEEEeCCCCCCc-CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHH----HHHHHHcC
Confidence 34567888999999999975543 2446689999999999999999988 43334555543210000 00001110
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
.. |+...-+.+....-++-..+++..+++...+.-..|+|......
T Consensus 142 ~~---------p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~ 187 (323)
T cd00704 142 NL---------PPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSNTQ 187 (323)
T ss_pred CC---------CHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccCce
Confidence 00 11122344555545555556677788777777677888755443
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.6e-07 Score=72.24 Aligned_cols=79 Identities=24% Similarity=0.216 Sum_probs=59.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.++++|+||+|.+|+.+++.|++.|++|++++| +.+....+.. +.. ..+.+....|..+.+++.+.++++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R-~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR-DLERAQKAADSLRA----RFGEGVGAVETSDDAARAAAIKGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh----hcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence 4579999999999999999999999999999999 5433322211 111 113455667888999999999999999
Q ss_pred EEeee
Q 026091 83 IHVAA 87 (243)
Q Consensus 83 i~~a~ 87 (243)
|++..
T Consensus 102 i~at~ 106 (194)
T cd01078 102 FAAGA 106 (194)
T ss_pred EECCC
Confidence 98754
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.7e-07 Score=71.72 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=55.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|+|||+||||. |+.+++.|.+.|++|++.+| +......+. ..+...+..+..|.+++.++++ ++|+||
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~-t~~~~~~~~--------~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI 70 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVT-TSEGKHLYP--------IHQALTVHTGALDPQELREFLKRHSIDILV 70 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEc-cCCcccccc--------ccCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence 47999999999 99999999999999999999 443222221 1133455667778888988886 489999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
+++.+
T Consensus 71 DAtHP 75 (256)
T TIGR00715 71 DATHP 75 (256)
T ss_pred EcCCH
Confidence 99755
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.1e-07 Score=75.54 Aligned_cols=84 Identities=20% Similarity=0.351 Sum_probs=65.6
Q ss_pred eEEEecCchhhHHHHHHHHHH----cCCeEEEEEeCCchhhchhhhhhcCCC--CCCCeEEEecCCCChhhHHHHhcccc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLD----HGYSVRTTVRSDPEQKRDLSFLTNLPR--ASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
-++|.|||||.|..+++++.. .|...-+.+|+...-.+.+++..+... -...+ ++.+|..|++++.++.+++-
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE
Confidence 489999999999999999998 678888889954443344444433211 12334 88999999999999999999
Q ss_pred EEEEeeeccCC
Q 026091 81 GVIHVAAPIDI 91 (243)
Q Consensus 81 ~vi~~a~~~~~ 91 (243)
+|+||+||...
T Consensus 86 vivN~vGPyR~ 96 (423)
T KOG2733|consen 86 VIVNCVGPYRF 96 (423)
T ss_pred EEEecccccee
Confidence 99999998764
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.1e-07 Score=73.17 Aligned_cols=167 Identities=16% Similarity=0.037 Sum_probs=101.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE--------- 70 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~--------- 70 (243)
+|.|+||+|.+|++++..|...+. ++.++++..... +.+....|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~ 65 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP 65 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence 589999999999999999987552 588888732211 1233333443332
Q ss_pred --hHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 71 --SFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 71 --~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
...+.++++|+|||+||..... .+.+.+.+..|+.-...+.....++ ++-..++.+|-..-.-.+ .......
T Consensus 66 ~~~~~~~~~~aDiVVitAG~~~~~-~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~----v~~~~sg 140 (324)
T TIGR01758 66 THDPAVAFTDVDVAILVGAFPRKE-GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNAL----VLSNYAP 140 (324)
T ss_pred cCChHHHhCCCCEEEEcCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHH----HHHHHcC
Confidence 4456788999999999976542 2345689999999999999999998 433455555532100000 0000000
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
.. ++..-=..+....-++-..+++..+++...++-..|+|......
T Consensus 141 ~~---------~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~ 186 (324)
T TIGR01758 141 SI---------PPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSSTQ 186 (324)
T ss_pred CC---------CcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCCc
Confidence 00 00111111233334444556777899988888888999865544
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.6e-06 Score=63.08 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=76.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCC-CCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRAS-ERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+||+|.+|++++..|...+ .++.+++++..........+.+..... .+..... .+. +.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence 389999999999999999999887 579999994332223333333221111 1222222 233 345578999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|-+||...... ....+.++.|..-...+.+...+.++-..++.+|
T Consensus 74 vitag~~~~~g-~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 74 VITAGVPRKPG-MSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EETTSTSSSTT-SSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEecccccccc-ccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99999754422 3456899999999999999999998333455444
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.7e-07 Score=76.76 Aligned_cols=74 Identities=22% Similarity=0.206 Sum_probs=57.2
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
++|+|+|||| +|.+|.+++++|.++|++|+++.+ +.. .. .+ .. ....|++
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~-~~~-~~-------~~---~~--~~~~dv~ 252 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSG-PVN-LP-------TP---AG--VKRIDVE 252 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCC-Ccc-cc-------CC---CC--cEEEccC
Confidence 4689999999 899999999999999999999988 331 10 01 12 2457999
Q ss_pred ChhhHHHHhc----cccEEEEeeeccCC
Q 026091 68 NPESFDAAIA----GCTGVIHVAAPIDI 91 (243)
Q Consensus 68 d~~~~~~~~~----~~d~vi~~a~~~~~ 91 (243)
+.+++.+.+. ++|++||+||....
T Consensus 253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 253 SAQEMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred CHHHHHHHHHHhcCCCCEEEEccccccc
Confidence 9887777764 58999999997543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-05 Score=66.56 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=79.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
|++..+||.|+|+ |.+|++++-.|+..|. ++.+++++..........+.+......++..... .. +.+++
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~------~~-~~~~~ 73 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG------DY-SDCKD 73 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC------CH-HHhCC
Confidence 3445679999997 9999999999998885 7888888444333333333332111123333221 23 34689
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+|+||-+||...... ....+.++.|..-...+++.+++++.-..++.+|
T Consensus 74 adivIitag~~~k~g-~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 74 ADLVVITAGAPQKPG-ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred CCEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 999999998754322 3455889999999999999999887333455444
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.3e-06 Score=71.42 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=58.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCc--hhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDP--EQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
+.|+++|+|| |++|++++..|++.|++ |+++.|+.. +.. +....+.. ....+.....|+.+.+.+.+.++.+
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~---~~~~~~~~~~d~~~~~~~~~~~~~~ 200 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ---EVPECIVNVYDLNDTEKLKAEIASS 200 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh---cCCCceeEEechhhhhHHHhhhccC
Confidence 3578999997 89999999999999986 999999431 222 22222211 1234556678998888888888889
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+|||+...
T Consensus 201 DilINaTp~ 209 (289)
T PRK12548 201 DILVNATLV 209 (289)
T ss_pred CEEEEeCCC
Confidence 999998744
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.4e-07 Score=74.44 Aligned_cols=73 Identities=26% Similarity=0.279 Sum_probs=52.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-C-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-G-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..|+|+||||+|+||+.++++|+++ | .+++++.| +......+. . ++..+|+. .+.+.+.++|+
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R-~~~rl~~La---~--------el~~~~i~---~l~~~l~~aDi 218 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVAR-QQERLQELQ---A--------ELGGGKIL---SLEEALPEADI 218 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcC-CHHHHHHHH---H--------HhccccHH---hHHHHHccCCE
Confidence 4689999999999999999999865 5 68888888 543322221 1 11123333 46678889999
Q ss_pred EEEeeeccCC
Q 026091 82 VIHVAAPIDI 91 (243)
Q Consensus 82 vi~~a~~~~~ 91 (243)
|||+++....
T Consensus 219 Vv~~ts~~~~ 228 (340)
T PRK14982 219 VVWVASMPKG 228 (340)
T ss_pred EEECCcCCcC
Confidence 9999987544
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-06 Score=68.69 Aligned_cols=63 Identities=21% Similarity=0.205 Sum_probs=45.5
Q ss_pred CchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------cccEEEEe
Q 026091 13 GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------GCTGVIHV 85 (243)
Q Consensus 13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ 85 (243)
++|++|++++++|+++|++|++++| ... .. .. ....+|+.+.+++.++++ ++|++||+
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~-~~~----l~---~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTT-KRA----LK---PE-------PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcC-hhh----cc---cc-------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4899999999999999999998876 221 00 00 013468888776666543 57999999
Q ss_pred eeccC
Q 026091 86 AAPID 90 (243)
Q Consensus 86 a~~~~ 90 (243)
||...
T Consensus 88 Agv~d 92 (227)
T TIGR02114 88 MAVSD 92 (227)
T ss_pred CEecc
Confidence 99754
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.1e-06 Score=67.71 Aligned_cols=178 Identities=15% Similarity=0.042 Sum_probs=104.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|++|.+|++++-.|+.++ .++.+++++ . .......+.+.. ........ ...+++.+.++++|+||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~-a~g~alDL~~~~---~~~~i~~~--~~~~~~y~~~~daDivv 73 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-N-TPGVAADLSHIN---TPAKVTGY--LGPEELKKALKGADVVV 73 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-c-cceeehHhHhCC---CcceEEEe--cCCCchHHhcCCCCEEE
Confidence 379999999999999999998887 478888884 2 122222222211 11111111 01233557788999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
-+||..... .....+.++.|..-...+.+..+++++-..++.+|-..-.-..--.........+ |+...
T Consensus 74 itaG~~~k~-g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~----------p~~rv 142 (310)
T cd01337 74 IPAGVPRKP-GMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVY----------DPKRL 142 (310)
T ss_pred EeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCC----------CHHHE
Confidence 999975432 2345689999999999999999998833355555543200000000000000000 11112
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC-CCCC
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF-ICPQ 202 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~-~~~~ 202 (243)
.+..-...-++-..+++..|++...++ +.++|.+ ....
T Consensus 143 iG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeHsGds~ 181 (310)
T cd01337 143 FGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGHSGVTI 181 (310)
T ss_pred EeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecCCCCce
Confidence 333333444555566777888888888 8999987 4544
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-05 Score=66.58 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=73.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCc--hhh-chhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDP--EQK-RDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~-~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
+||.|+||||++|+.++..|+..|+ +|++++| .. +.. .....+.+. ...+... .+.-..+.+ .++++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~-~~~~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~d~~-~l~~a 73 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISR-PKSLEKLKGLRLDIYDALAAAGIDA-----EIKISSDLS-DVAGS 73 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEEC-cccccccccccchhhhchhccCCCc-----EEEECCCHH-HhCCC
Confidence 4799999999999999999999985 5999998 33 111 000001110 0000111 111111233 48899
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
|+||-++|..... ..+..+.++.|..-...+.+...+.++-..+|..++.
T Consensus 74 DiViitag~p~~~-~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 74 DIVIITAGVPRKE-GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred CEEEEecCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 9999999865432 2334578899999999999988888633456666653
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-05 Score=70.13 Aligned_cols=77 Identities=21% Similarity=0.158 Sum_probs=55.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
|..+.|+|+|+|+++ +|..+++.|++.|++|++.+++..... .....+.. .+++++..|..+ +...++
T Consensus 1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~-----~~~~~~ 69 (450)
T PRK14106 1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-----LGIELVLGEYPE-----EFLEGV 69 (450)
T ss_pred CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCEEEeCCcch-----hHhhcC
Confidence 544578999999777 999999999999999999998432211 11122222 256788888776 345678
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+||++++.
T Consensus 70 d~vv~~~g~ 78 (450)
T PRK14106 70 DLVVVSPGV 78 (450)
T ss_pred CEEEECCCC
Confidence 999999886
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.2e-06 Score=66.66 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=60.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
.-++|-|||||.|.-++++|...|.+-.+.+| +..+. ..+... -+.++-..++.+++.+++.+++.++|+||
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgR-s~~kl---~~l~~~----LG~~~~~~p~~~p~~~~~~~~~~~VVlnc 78 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGR-SSAKL---DALRAS----LGPEAAVFPLGVPAALEAMASRTQVVLNC 78 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccC-CHHHH---HHHHHh----cCccccccCCCCHHHHHHHHhcceEEEec
Confidence 46999999999999999999999998877788 55333 322221 13344455566699999999999999999
Q ss_pred eeccCC
Q 026091 86 AAPIDI 91 (243)
Q Consensus 86 a~~~~~ 91 (243)
+||+..
T Consensus 79 vGPyt~ 84 (382)
T COG3268 79 VGPYTR 84 (382)
T ss_pred cccccc
Confidence 999765
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.19 E-value=5e-05 Score=62.64 Aligned_cols=173 Identities=14% Similarity=0.084 Sum_probs=100.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCC-CCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPR-ASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+| +|.+|+.++..|+..| +++.+++|+..........+.+... .......... +. . .++++|+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~---~-~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---DY---S-DCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---CH---H-HhCCCCEE
Confidence 4799999 5999999999999998 6899999944322222222222110 0112222221 22 2 35789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+++|..... .+...+.++.|..-...+.+.++++++-..++.+|-..-.-.. .......+ |+..
T Consensus 73 Iitag~~~~~-g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~----~~~~~~g~----------p~~~ 137 (306)
T cd05291 73 VITAGAPQKP-GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITY----VVQKLSGL----------PKNR 137 (306)
T ss_pred EEccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHH----HHHHHhCc----------CHHH
Confidence 9999875442 2345688999999999999999998833345555532100000 00000000 0111
Q ss_pred hHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 163 SYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 163 ~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
..+. +-...-++-..+++..+++..-++. .|+|......
T Consensus 138 v~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~s~ 177 (306)
T cd05291 138 VIGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGDSQ 177 (306)
T ss_pred EeeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCCce
Confidence 1222 2222344445556677888888886 7999864443
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.7e-05 Score=63.70 Aligned_cols=180 Identities=14% Similarity=0.051 Sum_probs=104.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCch--hhchhhhhhcCC-CCCCCeEEEecCCCChh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPE--QKRDLSFLTNLP-RASERLQIFNADLNNPE 70 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~ 70 (243)
|+ ++.||.|+||+|.+|++++-.|+..+. ++.++++.... .......+.+.. .....+.+ + .
T Consensus 1 ~~-~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~ 72 (326)
T PRK05442 1 MK-APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--D 72 (326)
T ss_pred CC-CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--c
Confidence 54 467999999999999999999887662 68888773221 111111111110 00011211 1 1
Q ss_pred hHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 71 SFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 71 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
...+.++++|+||-+||..... .+...+.+..|..-...+.+...++. +-..++.+|-..-.-. ...-+..+.
T Consensus 73 ~~y~~~~daDiVVitaG~~~k~-g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t-----~v~~k~s~g 146 (326)
T PRK05442 73 DPNVAFKDADVALLVGARPRGP-GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNA-----LIAMKNAPD 146 (326)
T ss_pred ChHHHhCCCCEEEEeCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHH-----HHHHHHcCC
Confidence 2245667899999999975432 24566899999999999999999855 2345555553210000 000000000
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
. |+....+.+....-++-..+++..+++...++...|+|......
T Consensus 147 ~--------p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~ 191 (326)
T PRK05442 147 L--------PAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSATQ 191 (326)
T ss_pred C--------CHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcCce
Confidence 0 11122344444545555566777788888888777888765443
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00015 Score=63.35 Aligned_cols=173 Identities=20% Similarity=0.173 Sum_probs=107.7
Q ss_pred CCeEEEecCc-hhhHHHHHHHHHHcCCeEEEEEeCC-chhhchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 5 KGRVCVTGGT-GFIGSWLIMRLLDHGYSVRTTVRSD-PEQKRDLSFLT-NLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 5 ~k~ilvtGat-G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.+..+||||+ |.||..+++.|++.|.+|++...+- ....+.-+.|- +....+..+-++..+..+..++..+++
T Consensus 396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~ 475 (866)
T COG4982 396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGD 475 (866)
T ss_pred cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcc
Confidence 4789999986 8999999999999999998876522 21222222222 233345567777788766655555543
Q ss_pred -----------------cccEEEEeeeccCC---CCCCh-HHHHHHHHHHHHHHHHHHHHhcCCc------cEEEEEecc
Q 026091 78 -----------------GCTGVIHVAAPIDI---HGKEP-EEVIIQRAVSGTIGILKSCLKSGTV------KRVVYTSSA 130 (243)
Q Consensus 78 -----------------~~d~vi~~a~~~~~---~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~------~~~i~~Ss~ 130 (243)
..|.+|-+|++.-. ....+ .+..+++-+....+++-..+..++- -|+|...|.
T Consensus 476 eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP 555 (866)
T COG4982 476 EQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP 555 (866)
T ss_pred ccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC
Confidence 14788888887432 11122 1245555666677777766665421 156666664
Q ss_pred eeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc----CccEEEEccCceeCCCCC
Q 026091 131 STVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH----GLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 131 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----gi~~~~~rp~~i~G~~~~ 200 (243)
.- +... ..-.|+.+|...|.++..+..++ -+..+--+.|++-|.+.-
T Consensus 556 Nr--G~FG---------------------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLM 606 (866)
T COG4982 556 NR--GMFG---------------------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLM 606 (866)
T ss_pred CC--CccC---------------------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccccc
Confidence 21 1110 11349999999999999987665 255566677777776443
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.4e-05 Score=54.42 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=67.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|+++| +| .|.++++.|.+.|++|++++. ++....... ...++.+.+|+.+++. ++-+++|.|+-
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi-~~~aV~~a~--------~~~~~~v~dDlf~p~~--~~y~~a~liys 83 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDI-NEKAVEKAK--------KLGLNAFVDDLFNPNL--EIYKNAKLIYS 83 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--------HhCCeEEECcCCCCCH--HHHhcCCEEEE
Confidence 46899999 78 999999999999999999999 654333332 1267999999998765 45567898874
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
. .|..+.+ ..+++.|++.+ +.-+|..
T Consensus 84 i---------rpp~el~-------~~~~~la~~~~-~~~~i~~ 109 (134)
T PRK04148 84 I---------RPPRDLQ-------PFILELAKKIN-VPLIIKP 109 (134)
T ss_pred e---------CCCHHHH-------HHHHHHHHHcC-CCEEEEc
Confidence 4 2222333 37788888888 6665544
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.2e-05 Score=67.86 Aligned_cols=99 Identities=20% Similarity=0.271 Sum_probs=61.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~ 81 (243)
+++||.|.||||++|..+++.|.++ ..++..+.+ +........ . ...+....|+.+.+.++.. ++++|+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s-~~saG~~i~---~-----~~~~l~~~~~~~~~~~~~~~~~~~Dv 107 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTA-DRKAGQSFG---S-----VFPHLITQDLPNLVAVKDADFSDVDA 107 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEC-hhhcCCCch---h-----hCccccCccccceecCCHHHhcCCCE
Confidence 3569999999999999999999988 579999988 332221111 0 0112223444433333322 478999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
|+-+.+.. ....++..+ +.+ .++|-+|+..
T Consensus 108 Vf~Alp~~-----------------~s~~i~~~~-~~g--~~VIDlSs~f 137 (381)
T PLN02968 108 VFCCLPHG-----------------TTQEIIKAL-PKD--LKIVDLSADF 137 (381)
T ss_pred EEEcCCHH-----------------HHHHHHHHH-hCC--CEEEEcCchh
Confidence 98764320 234555554 345 5899999875
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.5e-05 Score=62.64 Aligned_cols=73 Identities=18% Similarity=0.304 Sum_probs=58.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|+++|.| .|-+|+++++.|.+.|++|+++.+ +++...... . .......+.+|-+|++.|+++ ++++|+++-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~-d~~~~~~~~--~----~~~~~~~v~gd~t~~~~L~~agi~~aD~vva 72 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDR-DEERVEEFL--A----DELDTHVVIGDATDEDVLEEAGIDDADAVVA 72 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEc-CHHHHHHHh--h----hhcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence 4789989 799999999999999999999999 553332211 0 013678999999999999999 788999985
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
..
T Consensus 73 ~t 74 (225)
T COG0569 73 AT 74 (225)
T ss_pred ee
Confidence 53
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.2e-05 Score=61.91 Aligned_cols=177 Identities=13% Similarity=0.040 Sum_probs=104.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCch--hhchhhhhhcCC-CCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPE--QKRDLSFLTNLP-RASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~ 73 (243)
++.||.|+||+|.+|++++-.|+..+. ++.++++.... .......+.+.. ......++ + ....
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~ 74 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-----T--TDPE 74 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-----e--cChH
Confidence 456999999999999999999988873 68888873211 111222222111 00011111 1 2334
Q ss_pred HHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCC-CCCch
Q 026091 74 AAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDET-FWSDV 151 (243)
Q Consensus 74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~-~~~~~ 151 (243)
+.++++|+||.+||..... .+...+.+..|..-...+...++++++ -..++.+|-..-. . ........ .+
T Consensus 75 ~~~~daDvVVitAG~~~k~-g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv--~--t~v~~k~s~g~--- 146 (323)
T TIGR01759 75 EAFKDVDAALLVGAFPRKP-GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANT--N--ALIASKNAPDI--- 146 (323)
T ss_pred HHhCCCCEEEEeCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHH--H--HHHHHHHcCCC---
Confidence 5677899999999975432 245668999999999999999999983 2344444421100 0 00000000 10
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
|+....+.+....-++-..+++..+++...++-..|+|......
T Consensus 147 -------p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~ 190 (323)
T TIGR01759 147 -------PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNTQ 190 (323)
T ss_pred -------CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCCce
Confidence 11122344444555555566777789888888888999865544
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.9e-05 Score=59.94 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=48.6
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
.+|+||||+| ||-.|.++++++..+|++|+.+..... .. ....++.+.++-.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~--~~----------~p~~~~~i~v~sa 69 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS--LP----------PPPGVKVIRVESA 69 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------TTEEEEE-SSH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc--cc----------ccccceEEEecch
Confidence 4688999986 799999999999999999999998321 10 0236666665432
Q ss_pred C--hhhHHHHhccccEEEEeeeccCC
Q 026091 68 N--PESFDAAIAGCTGVIHVAAPIDI 91 (243)
Q Consensus 68 d--~~~~~~~~~~~d~vi~~a~~~~~ 91 (243)
+ .+.+.+.+++.|++||+||+...
T Consensus 70 ~em~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 70 EEMLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred hhhhhhhccccCcceeEEEecchhhe
Confidence 2 24555566678999999998664
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1e-05 Score=75.02 Aligned_cols=166 Identities=19% Similarity=0.174 Sum_probs=111.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeE-EEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSV-RTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------ 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------ 78 (243)
|.-+|+||-|..|..+++.|.++|.+- +..+|+.-+...+..-.......+-.+.+=.-|++......+++++
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence 678899999999999999999999764 4445643332222222222111233444555677777777888764
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
+-.|+|+|+.... .+...++..-+.-+.+|.||-+..++... .+.||.+||.+--.++.
T Consensus 1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~--------------- 1913 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA--------------- 1913 (2376)
T ss_pred ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC---------------
Confidence 4678899876543 34455666667788899999999998762 46899999965222221
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCce
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFV 194 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i 194 (243)
..+-|+.+..+.|+++.+ .+.+|++-+.+--|.|
T Consensus 1914 -------GQtNYG~aNS~MERiceq-Rr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 -------GQTNYGLANSAMERICEQ-RRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred -------cccccchhhHHHHHHHHH-hhhcCCCcceeeeecc
Confidence 113399999999999987 4456888777765544
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00027 Score=60.72 Aligned_cols=177 Identities=12% Similarity=-0.001 Sum_probs=105.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-------CC--eEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-------GY--SVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~ 74 (243)
.-||.|+|++|.+|++++-.|+.. +. ++..++++..........+.+.. .....+.+... + .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 458999999999999999999887 53 68888874443333333333211 00112221111 2 35
Q ss_pred HhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHh-cCCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 75 AIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLK-SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
.++++|+||-+||..... .....+.++.|..-...+.+...+ +++-..+|.+|-..-.-.+ ........+
T Consensus 173 ~~kdaDiVVitAG~prkp-G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~----v~~k~sg~~---- 243 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGP-GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNAL----ICLKNAPNI---- 243 (444)
T ss_pred HhCcCCEEEECCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHH----HHHHHcCCC----
Confidence 567899999999975432 244668999999999999999999 5633455655532100000 000000000
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
+...--..+....-++-..++++.+++...++-..|+|......
T Consensus 244 -----~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsq 287 (444)
T PLN00112 244 -----PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQ 287 (444)
T ss_pred -----CcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCce
Confidence 00111222333334555566777899999998889999865544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.3e-05 Score=67.85 Aligned_cols=102 Identities=20% Similarity=0.157 Sum_probs=68.1
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
+.|+|+|||| ||.+|.+++++|.++|++|+++.++... . . ... ....|+.
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~-~--------~---~~~--~~~~~v~ 249 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL-L--------T---PPG--VKSIKVS 249 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc-C--------C---CCC--cEEEEec
Confidence 4689999999 4679999999999999999999873321 1 1 112 2457888
Q ss_pred ChhhH-HHHh----ccccEEEEeeeccCCCCCC----hH---HHHHHHHHHHHHHHHHHHHhcC
Q 026091 68 NPESF-DAAI----AGCTGVIHVAAPIDIHGKE----PE---EVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 68 d~~~~-~~~~----~~~d~vi~~a~~~~~~~~~----~~---~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
+.+++ +.++ .++|++||+||........ .. ...+..|+..+.-+++..++..
T Consensus 250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 88777 4444 3589999999985442110 00 1123356666777777777654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00013 Score=60.12 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=75.4
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||.|+|++|.+|++++-.|+..+. ++.++++ .+ .......+.+.. ......... +.+++.+.++++|+||-
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di-~~-a~g~a~DL~~~~---~~~~i~~~~--~~~~~~~~~~daDivvi 73 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDI-AG-AAGVAADLSHIP---TAASVKGFS--GEEGLENALKGADVVVI 73 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecC-CC-CcEEEchhhcCC---cCceEEEec--CCCchHHHcCCCCEEEE
Confidence 689999999999999999988874 7888888 33 222222222211 111111100 11235678889999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+||..... .....+.+..|..-...+.+..+++++-..++.+|-
T Consensus 74 taG~~~~~-g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 74 PAGVPRKP-GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred eCCCCCCC-CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 99975442 234558899999999999999998873334555554
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00033 Score=57.78 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=73.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|.|+|+ |.+|+.++..|+.+| .+|.+++++..........+............... | . +.++++|+||.
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVVI 73 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEEE
Confidence 6999995 999999999999999 68999998433222222223322111122222222 2 2 34789999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+++..... .+...+....|......+.+..++.++-..++..+
T Consensus 74 ta~~~~~~-~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 74 TAGANQKP-GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred ccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 98865432 23445788899999999999998887233344443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.1e-05 Score=72.69 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=57.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-Ce-------------EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YS-------------VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP 69 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~ 69 (243)
.+|+|+|+| +|++|+.+++.|++.. .+ |.+.++ ....... +... ..+++.++.|+.|.
T Consensus 568 ~~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~-~~~~a~~---la~~---~~~~~~v~lDv~D~ 639 (1042)
T PLN02819 568 KSQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASL-YLKDAKE---TVEG---IENAEAVQLDVSDS 639 (1042)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECC-CHHHHHH---HHHh---cCCCceEEeecCCH
Confidence 478999999 5999999999998753 33 666666 4432222 2111 12577899999999
Q ss_pred hhHHHHhccccEEEEeeec
Q 026091 70 ESFDAAIAGCTGVIHVAAP 88 (243)
Q Consensus 70 ~~~~~~~~~~d~vi~~a~~ 88 (243)
+++.++++++|+||.+...
T Consensus 640 e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 640 ESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred HHHHHhhcCCCEEEECCCc
Confidence 9999999999999988754
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00035 Score=58.46 Aligned_cols=115 Identities=18% Similarity=0.143 Sum_probs=74.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|+ |.+|++++-.|+..+ .++.+++++..........+.+........ -+.++ .+.+ .++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~----~dy~-~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS----TDYA-VTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC----CCHH-HhCCCCEEE
Confidence 59999995 999999999998887 478888884332222222232221111122 22211 1232 378999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
-+||..... .....+.+..|..-...+.+..++++.-..++.+|
T Consensus 111 itAG~~~k~-g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIP-GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCc-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999975432 23456889999999999999999887333455555
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00031 Score=57.41 Aligned_cols=170 Identities=14% Similarity=0.025 Sum_probs=95.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|| |++|++++-.|+.++ .++.++++...........+.+.......-..+.+| .+ .+.++++|+|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence 47999998 999999999998776 489999984222222222222211111111222222 11 44567899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
-+||.....- ....+.++.|..-...+.+...+.+ ...++.+-|-=+- .. ....-+.+.. ++....
T Consensus 75 itAG~prKpG-mtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD-~~---ty~~~k~sg~--------p~~rvi 140 (313)
T COG0039 75 ITAGVPRKPG-MTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVD-IL---TYIAMKFSGF--------PKNRVI 140 (313)
T ss_pred EeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHH-HH---HHHHHHhcCC--------Ccccee
Confidence 9998755422 3445889999999999999999988 4444444331000 00 0000000000 000011
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCcee
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVT 195 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~ 195 (243)
-..+....-++-..++++.+++...++...+.
T Consensus 141 g~gt~LDsaR~~~~lae~~~v~~~~V~~~ViG 172 (313)
T COG0039 141 GSGTVLDSARFRTFLAEKLGVSPKDVHAYVIG 172 (313)
T ss_pred cccchHHHHHHHHHHHHHhCCChhHceeeEec
Confidence 23344445555666677778877777755444
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00012 Score=60.33 Aligned_cols=116 Identities=12% Similarity=0.094 Sum_probs=72.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
|+||.|+|| |.+|+.++..|+..|. +|.++++ .++.. .....+.+...... ....++...++ +.++++|+|
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~-~~~~~~~~~~dl~~~~~~~~----~~~~i~~~~d~-~~~~~aDiV 74 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDI-VEGVPQGKALDIAEAAPVEG----FDTKITGTNDY-EDIAGSDVV 74 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEEC-CCchhHHHHHHHHhhhhhcC----CCcEEEeCCCH-HHHCCCCEE
Confidence 469999997 9999999999998875 8999998 44322 11111111100000 01111111223 346899999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|.+++..... .....+.+..|+.-...+++...+..+-..+|..|
T Consensus 75 ii~~~~p~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 75 VITAGVPRKP-GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred EECCCCCCCc-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9998865432 23445778889999999999888887233455554
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00039 Score=57.24 Aligned_cols=172 Identities=15% Similarity=0.058 Sum_probs=100.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCC-C-CCeEEEecCCCChhhHHHHhccccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRA-S-ERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
||.|+|+ |.+|+.++..|+.++ .++.+++++..........+.+.... . .+++...+| .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 5889996 999999999998887 37888888443333333333332111 1 134444333 3567789999
Q ss_pred EEeeeccCCCCCC-hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec-ceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDIHGKE-PEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS-ASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|-+||.......+ +..+.+..|..-...+.+...+++ ...++.+-| ..-.-.+ .......+ |+
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~----~~~k~sg~----------p~ 137 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVY----IAATEFDY----------PA 137 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHH----HHHHHhCc----------Ch
Confidence 9999975432222 145889999999999999999998 444444333 2100000 00000000 01
Q ss_pred CchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 161 GKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 161 ~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
.-..+. +-...-++-..+++..+++...++.. |+|.+....
T Consensus 138 ~rviG~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHGds~ 179 (307)
T cd05290 138 NKVIGTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHGSHA 179 (307)
T ss_pred hheecccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCCCce
Confidence 111222 33344455556677778888888775 888865433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.3e-05 Score=53.57 Aligned_cols=98 Identities=23% Similarity=0.342 Sum_probs=54.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
||.|+||||++|+.+++.|.+.- .++..+..++.+....+......+ .........| .+.+. ++++|+|+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~-~~~~~----~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP--KGFEDLSVED-ADPEE----LSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG--TTTEEEBEEE-TSGHH----HTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc--ccccceeEee-cchhH----hhcCCEEEec
Confidence 69999999999999999998864 566666553442222222221110 0111121122 23333 3789999988
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
... . ....+...+.+.| + ++|=.|+.
T Consensus 74 ~~~----------~-------~~~~~~~~~~~~g-~-~ViD~s~~ 99 (121)
T PF01118_consen 74 LPH----------G-------ASKELAPKLLKAG-I-KVIDLSGD 99 (121)
T ss_dssp SCH----------H-------HHHHHHHHHHHTT-S-EEEESSST
T ss_pred Cch----------h-------HHHHHHHHHhhCC-c-EEEeCCHH
Confidence 432 0 1235555566777 4 56655553
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.1e-05 Score=54.34 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.++++|.| +|..|+.++.+|.+.|.+ |+++.| +.+....+...- ....+..+.. +++.+.+.++|+|
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nR-t~~ra~~l~~~~----~~~~~~~~~~-----~~~~~~~~~~Div 79 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNR-TPERAEALAEEF----GGVNIEAIPL-----EDLEEALQEADIV 79 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEES-SHHHHHHHHHHH----TGCSEEEEEG-----GGHCHHHHTESEE
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEEC-CHHHHHHHHHHc----CccccceeeH-----HHHHHHHhhCCeE
Confidence 578999999 599999999999999976 999999 554433332111 1123444433 3444777889999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|++.+..
T Consensus 80 I~aT~~~ 86 (135)
T PF01488_consen 80 INATPSG 86 (135)
T ss_dssp EE-SSTT
T ss_pred EEecCCC
Confidence 9997643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00046 Score=56.96 Aligned_cols=115 Identities=19% Similarity=0.154 Sum_probs=74.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|+ |.+|+.++-.|+..| .++.+++++..........+.+............. .+.+ .++++|+||
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~-~~~~adivv 76 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYS-VTANSKVVI 76 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHH-HhCCCCEEE
Confidence 58999995 999999999998887 47888887443222223333222111111122211 1233 368899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
-+||..... .....+.+..|..-...+.+..++++.-..++.+|
T Consensus 77 itaG~~~k~-g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 77 VTAGARQNE-GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred ECCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 999875442 24456889999999999999999987334555555
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00021 Score=61.34 Aligned_cols=177 Identities=14% Similarity=0.034 Sum_probs=102.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc---C--CeEEE--EEeC--CchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH---G--YSVRT--TVRS--DPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~---g--~~V~~--~~r~--~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~ 74 (243)
+-+|+||||+|.||++|+-.++.- | ..|.+ +++. ..........+.+.. .....+.+.. .-.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-------~~~e 195 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-------DLDV 195 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-------CCHH
Confidence 468999999999999999999763 3 33433 3331 111111111111111 0011222221 1246
Q ss_pred HhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEEec-ceeeecCCCCcccccCCCCCchh
Q 026091 75 AIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT-VKRVVYTSS-ASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss-~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
.++++|+||-+||..... .....+.++.|..-...+.+...++++ -.+++.+.| ..-. . ........ +.
T Consensus 196 a~~daDvvIitag~prk~-G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~--~--t~i~~k~a-pg--- 266 (452)
T cd05295 196 AFKDAHVIVLLDDFLIKE-GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNL--K--TSILIKYA-PS--- 266 (452)
T ss_pred HhCCCCEEEECCCCCCCc-CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHH--H--HHHHHHHc-CC---
Confidence 778999999999875442 245668999999999999999988873 145555554 1100 0 00000000 00
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
-|+...-+.+....-++...++++.|++...++-..|+|......
T Consensus 267 -----iP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sq 311 (452)
T cd05295 267 -----IPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGNT 311 (452)
T ss_pred -----CCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCce
Confidence 012233455555545555567788899999998889999865544
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00034 Score=48.84 Aligned_cols=68 Identities=29% Similarity=0.489 Sum_probs=52.2
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIHV 85 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ 85 (243)
|+|.| .|.+|..+++.|.+.+.+|+++.+ ++.....+. . ..+.++.+|.+|++.++++ +++++.|+-+
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~-d~~~~~~~~---~-----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDR-DPERVEELR---E-----EGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEES-SHHHHHHHH---H-----TTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEEC-CcHHHHHHH---h-----cccccccccchhhhHHhhcCccccCEEEEc
Confidence 67888 589999999999997779999999 654333322 2 2588999999999999987 4678888755
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00018 Score=58.01 Aligned_cols=171 Identities=16% Similarity=0.041 Sum_probs=98.1
Q ss_pred EEEecCchhhHHHHHHHHHHcC----CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHG----YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|.|+||+|.+|..++..|+..| .++.+++++..........+.+..... ....+.-.+++.+.++++|+||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHhCCCCEEE
Confidence 5789998999999999999888 689999884432222222222221111 0112222233567788999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCC-CCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDET-FWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~ 162 (243)
.+++........ ..+....|+.....+.+.+++.++-..++..|-....-. ..+.+. .. |+..
T Consensus 76 ~t~~~~~~~g~~-r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t-----~~~~~~sg~----------~~~k 139 (263)
T cd00650 76 ITAGVGRKPGMG-RLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIIT-----YLVWRYSGL----------PKEK 139 (263)
T ss_pred ECCCCCCCcCCC-HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHH-----HHHHHHhCC----------Cchh
Confidence 999875543223 347888899999999999998873334554442110000 000000 00 0111
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
..|..-...-++-..+++..+++..-++ +.++|....
T Consensus 140 viG~~~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~ 176 (263)
T cd00650 140 VIGLGTLDPIRFRRILAEKLGVDPDDVK-VYILGEHGG 176 (263)
T ss_pred EEEeecchHHHHHHHHHHHhCCCccceE-EEEEEcCCC
Confidence 1122212223334455666788888888 888887544
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00035 Score=58.33 Aligned_cols=106 Identities=14% Similarity=0.203 Sum_probs=67.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchh----------------------hhhhcCCCCCCCeE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDL----------------------SFLTNLPRASERLQ 60 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~~~ 60 (243)
+.++|+|+| +|.+|+++++.|+..|. ++++++++.- ...++ +.+... ...-+++
T Consensus 23 ~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~v-e~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-np~v~i~ 99 (338)
T PRK12475 23 REKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYV-EWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-NSEVEIV 99 (338)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcc-cccccCccccccHHHccCCccHHHHHHHHHHHH-CCCcEEE
Confidence 457899999 68899999999999996 7888887421 11011 111111 1233566
Q ss_pred EEecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 61 ~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
.+..|++ .+.+.++++++|+||.+. +.+. + -..+-+.|++.+ + .+|+.+..+
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~--------D~~~----~----r~~in~~~~~~~-i-p~i~~~~~g 151 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDAT--------DNFD----T----RLLINDLSQKYN-I-PWIYGGCVG 151 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcC--------CCHH----H----HHHHHHHHHHcC-C-CEEEEEecc
Confidence 7777775 457788899999999773 2221 1 123456777777 4 567766544
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0003 Score=58.35 Aligned_cols=118 Identities=13% Similarity=0.096 Sum_probs=73.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCC-CCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPR-ASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+.+||.|+|| |.+|+.++..|+..| .++.+++++..........+..... .+... .+. ...+++ .++++|+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~----~~~d~~-~l~~ADi 76 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NIL----GTNNYE-DIKDSDV 76 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEE----eCCCHH-HhCCCCE
Confidence 3568999996 999999999998888 6888888843221111111111100 00011 111 112344 5689999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
||.+++...... ....+.+..|..-...+.+.+.+.++-..++.+|-
T Consensus 77 VVitag~~~~~g-~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 77 VVITAGVQRKEE-MTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred EEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998654322 33457888899888899999888872333565554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.5e-05 Score=64.66 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=57.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|+|+|+|+ |.+|.++++.|.+.|++|+++.+ ++.....+. . ..+++++.+|.++...+.++ ++++|.||-
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~-~~~~~~~~~---~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~ 71 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDT-DEERLRRLQ---D----RLDVRTVVGNGSSPDVLREAGAEDADLLIA 71 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEEC-CHHHHHHHH---h----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence 37999995 99999999999999999999999 554332221 1 12678999999999999988 788998886
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 72 ~~ 73 (453)
T PRK09496 72 VT 73 (453)
T ss_pred ec
Confidence 63
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00048 Score=57.50 Aligned_cols=108 Identities=17% Similarity=0.232 Sum_probs=68.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch----------------------hhhhhcCCCCCCCeE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD----------------------LSFLTNLPRASERLQ 60 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~ 60 (243)
+.++|+|+| +|.+|+++++.|+..|. ++.+++.+.-+ ..+ ...+..+ ...-.++
T Consensus 23 ~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve-~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-np~v~v~ 99 (339)
T PRK07688 23 REKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVE-WSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-NSDVRVE 99 (339)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccC-HHHcCccccccHHHhcCCCcHHHHHHHHHHHH-CCCcEEE
Confidence 457899999 69999999999999996 88888874211 000 0111111 1123456
Q ss_pred EEecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceee
Q 026091 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTV 133 (243)
Q Consensus 61 ~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~ 133 (243)
.+..+++ .+.+.++++++|+||.+. +.+ ..-..+.++|.+.+ ..+|+.|+.+.+
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~--------Dn~--------~~r~~ln~~~~~~~--iP~i~~~~~g~~ 153 (339)
T PRK07688 100 AIVQDVT-AEELEELVTGVDLIIDAT--------DNF--------ETRFIVNDAAQKYG--IPWIYGACVGSY 153 (339)
T ss_pred EEeccCC-HHHHHHHHcCCCEEEEcC--------CCH--------HHHHHHHHHHHHhC--CCEEEEeeeeee
Confidence 6666764 456777889999999773 222 11235667788888 467777765533
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.7e-05 Score=62.59 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=28.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCe---EEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYS---VRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~---V~~~~r~ 38 (243)
|++|+|+||||++|..+++.|.+++|. +.++.|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~ 37 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASA 37 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 358999999999999999999998764 5777773
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0011 Score=55.06 Aligned_cols=117 Identities=16% Similarity=0.116 Sum_probs=74.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhc--C-CCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTN--L-PRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
+++||.|+| +|.+|+.++..++..|. +|.++++ +++.. ....++. . ...+...++... .| + +.++++
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi-~~~~~-~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~a 75 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDI-VKNIP-QGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGS 75 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeC-CCchh-hHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCC
Confidence 457999999 69999999999988884 8888888 44322 1112211 1 001112222211 12 3 356899
Q ss_pred cEEEEeeeccCCCCC----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 80 TGVIHVAAPIDIHGK----EPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 80 d~vi~~a~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|+||.+++....... .+..+.+..|..-...+.+.+.+.++-..++..|-
T Consensus 76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999987543221 14557888899989999999988882235666554
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00027 Score=61.42 Aligned_cols=79 Identities=14% Similarity=0.074 Sum_probs=51.8
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-cc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-GC 79 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~ 79 (243)
|...+|+|+|+|++| +|.+.++.|++.|++|.+.+++..........+.. .+++++.+. +... +++ ++
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-----~g~~~~~~~--~~~~---~~~~~~ 69 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-----EGIKVICGS--HPLE---LLDEDF 69 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-----cCCEEEeCC--CCHH---HhcCcC
Confidence 666678999999877 99999999999999999998733221111122222 144554433 1111 233 48
Q ss_pred cEEEEeeeccC
Q 026091 80 TGVIHVAAPID 90 (243)
Q Consensus 80 d~vi~~a~~~~ 90 (243)
|.||+++|...
T Consensus 70 d~vV~s~gi~~ 80 (447)
T PRK02472 70 DLMVKNPGIPY 80 (447)
T ss_pred CEEEECCCCCC
Confidence 99999988654
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00011 Score=61.56 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=59.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEE-ecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF-NADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~v 82 (243)
|++|+|+||||++|+.+++.|.+. ++++.++.+++. ....+... ...+..+ ..++.+.+.. ..+++|+|
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~------~~~~~~~~~~~~~~~~~~--~~~~vD~V 72 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDV------HPHLRGLVDLVLEPLDPE--ILAGADVV 72 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHh------CcccccccCceeecCCHH--HhcCCCEE
Confidence 579999999999999999999886 578888776332 11111100 0112111 2233344332 44679999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+-+... . ....++..+.+.| +++|=.|+..
T Consensus 73 f~alP~-------~----------~~~~~v~~a~~aG--~~VID~S~~f 102 (343)
T PRK00436 73 FLALPH-------G----------VSMDLAPQLLEAG--VKVIDLSADF 102 (343)
T ss_pred EECCCc-------H----------HHHHHHHHHHhCC--CEEEECCccc
Confidence 866321 1 1235555666667 6788888754
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0085 Score=43.95 Aligned_cols=164 Identities=18% Similarity=0.187 Sum_probs=88.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC---ChhhHHH----Hhc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN---NPESFDA----AIA 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---d~~~~~~----~~~ 77 (243)
..||+|-||-|-+|+++++.|..++|-|.-++-...+.. +.-..+.+|-. ..+++.+ .+.
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------------d~sI~V~~~~swtEQe~~v~~~vg~sL~ 69 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------------DSSILVDGNKSWTEQEQSVLEQVGSSLQ 69 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------------cceEEecCCcchhHHHHHHHHHHHHhhc
Confidence 458999999999999999999999998877766222111 11223333322 1222222 222
Q ss_pred --cccEEEEeeeccCCCCCChH------HHHHHHHHHHHHHHHHHHHhcCCccEEEEEeccee-eecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDIHGKEPE------EVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAST-VHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~~~~~~------~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~-~~~~~~~~~~~~e~~~ 148 (243)
++|.|++.||-......... ..++.-.+....--.+.+..+-+..-++.+..+.. ..+.
T Consensus 70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gT------------ 137 (236)
T KOG4022|consen 70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGT------------ 137 (236)
T ss_pred ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCC------------
Confidence 58999999975443221111 11222221111111122222222344555544332 2222
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-cCcc----EEEEccCceeCCCCCCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-HGLD----LVTIIPSFVTGPFICPQL 203 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~----~~~~rp~~i~G~~~~~~~ 203 (243)
|....|+.+|.+..++.++++.+ +|++ ...+-|-..-.|.....+
T Consensus 138 ----------PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwM 187 (236)
T KOG4022|consen 138 ----------PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWM 187 (236)
T ss_pred ----------CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccC
Confidence 12346999999999999999744 4544 345555555566554443
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00045 Score=56.89 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=72.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+| +|++|+.++..|+.+|+ +|+++++ ..+... ....+.+. . ........++-..++.+ ++++|+||
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~~VvlvDi-~~~l~~g~a~d~~~~-~---~~~~~~~~i~~t~d~~~-~~~aDiVI 74 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELADLVLLDV-VEGIPQGKALDMYEA-S---PVGGFDTKVTGTNNYAD-TANSDIVV 74 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeC-CCChhHHHHHhhhhh-h---hccCCCcEEEecCCHHH-hCCCCEEE
Confidence 4799999 59999999999999886 8999988 333221 11111110 0 00000111211122333 57899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
-+++..... ..+..+.+..|......+++...+.++-..+|.+|-
T Consensus 75 itag~p~~~-~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 75 ITAGLPRKP-GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred EcCCCCCCc-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999865432 234557888999999999999888863334555554
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.001 Score=54.77 Aligned_cols=113 Identities=17% Similarity=0.148 Sum_probs=74.4
Q ss_pred EEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|.|+| +|++|+.++-.|+..| .++.+++++..........+.+........+.... .| .+.++++|+||.+
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT 73 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence 46889 5899999999999888 68999998444333333333332211112222221 12 3477899999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+|..... .+...+....|+.-...+.+..+++++-..++..|
T Consensus 74 ag~p~~~-~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 74 AGAPRKP-GETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9875432 23455888899999999999999987333455555
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00076 Score=57.03 Aligned_cols=177 Identities=12% Similarity=0.010 Sum_probs=99.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-Ce----EEE----EEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YS----VRT----TVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~----V~~----~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~ 74 (243)
+-||.|+||+|.+|++++-.|+..+ .. |.+ ++++.+........+.+.. .....+.+... + .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 4689999999999999999998876 22 333 2443332222222222211 00112221111 1 35
Q ss_pred HhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 75 AIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
.++++|+||-+||..... .+...+.+..|..-...+.....++. +-..+|.+|-..-.-.+ ........+
T Consensus 117 ~~kdaDIVVitAG~prkp-g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~----v~~k~sg~~---- 187 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGP-GMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNAL----IAMKNAPNI---- 187 (387)
T ss_pred HhCCCCEEEECCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHH----HHHHHcCCC----
Confidence 667899999999975432 24566899999999999999998854 23355555532100000 000000000
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
+...-=..+....-++-..++++.+++...++-..|+|......
T Consensus 188 -----~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds~ 231 (387)
T TIGR01757 188 -----PRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHSTTQ 231 (387)
T ss_pred -----cccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCCcE
Confidence 00011122333444555566777788888888888999865543
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00016 Score=55.27 Aligned_cols=38 Identities=32% Similarity=0.378 Sum_probs=31.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
||++.|.| +|.||+.++++|.+.||+|++.+|+.++..
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~ 38 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKAL 38 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHH
Confidence 35677755 999999999999999999999988666543
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00062 Score=48.29 Aligned_cols=90 Identities=20% Similarity=0.323 Sum_probs=53.2
Q ss_pred CeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+||.|.|++|.+|+.+++.+.+ .++++.+...++++.... +.+.+.. +.. ...+.-.++++++++.+|++|.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g-~d~g~~~----~~~--~~~~~v~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG-KDVGELA----GIG--PLGVPVTDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT-SBCHHHC----TSS--T-SSBEBS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc-chhhhhh----CcC--CcccccchhHHHhcccCCEEEE
Confidence 3799999999999999999998 578876665534411110 1010000 000 1122223677888888999998
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
+.-+ + .+...++.+.+++
T Consensus 74 fT~p----------~-------~~~~~~~~~~~~g 91 (124)
T PF01113_consen 74 FTNP----------D-------AVYDNLEYALKHG 91 (124)
T ss_dssp ES-H----------H-------HHHHHHHHHHHHT
T ss_pred cCCh----------H-------HhHHHHHHHHhCC
Confidence 8421 1 2345677788888
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00025 Score=56.94 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=45.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
++|.|+|++|.+|+.+++.+.+. +.++.++..++++..... -..++...+++.++++++|+||.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------------~~~~i~~~~dl~~ll~~~DvVid 66 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------------GALGVAITDDLEAVLADADVLID 66 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------------CCCCccccCCHHHhccCCCEEEE
Confidence 58999999999999999988764 688877665344221110 12234344566666777888887
Q ss_pred eee
Q 026091 85 VAA 87 (243)
Q Consensus 85 ~a~ 87 (243)
++.
T Consensus 67 ~t~ 69 (257)
T PRK00048 67 FTT 69 (257)
T ss_pred CCC
Confidence 763
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00023 Score=58.73 Aligned_cols=34 Identities=32% Similarity=0.499 Sum_probs=31.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
++|.|+| +|.+|+.++..|++.|++|++.+| +++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~-~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDA-DPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeC-CHH
Confidence 5799999 899999999999999999999999 543
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00014 Score=60.52 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=26.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeE
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSV 32 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V 32 (243)
|+ +|.+|+|+||||++|..+++.|.+++|.+
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~hP~ 31 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDFPV 31 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence 54 35799999999999999999999877643
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0014 Score=50.60 Aligned_cols=106 Identities=15% Similarity=0.209 Sum_probs=65.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhh--------------------hhhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLS--------------------FLTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 62 (243)
..++|+|.| +|.+|+++++.|+..|. ++++++.+.- ..+.+. .+... ...-+++.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~v-e~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~ 96 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHV-DLSNLQRQILFTEEDVGRPKVEVAAQRLREL-NSDIQVTAL 96 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEE-cccchhhhhccChhhCCChHHHHHHHHHHHh-CCCCEEEEe
Confidence 457899999 89999999999999995 8888887421 111111 11111 112234444
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
...+. .+.+.++++++|+||.+.. ... .-..+.+.|++.+ ..+|+.++.+
T Consensus 97 ~~~i~-~~~~~~~~~~~D~Vi~~~d--------~~~--------~r~~l~~~~~~~~--ip~i~~~~~g 146 (202)
T TIGR02356 97 KERVT-AENLELLINNVDLVLDCTD--------NFA--------TRYLINDACVALG--TPLISAAVVG 146 (202)
T ss_pred hhcCC-HHHHHHHHhCCCEEEECCC--------CHH--------HHHHHHHHHHHcC--CCEEEEEecc
Confidence 44443 4567788899999997731 111 1224557778887 4677766543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0024 Score=45.99 Aligned_cols=106 Identities=15% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhh--h---hcC--------------CCCCCCeEEEec
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSF--L---TNL--------------PRASERLQIFNA 64 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~---~~~--------------~~~~~~~~~~~~ 64 (243)
.++|+|.| .|.+|+.+++.|+..|. ++++++.+.-+ .+.+.+ + .+. ..+.-+++.+..
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~-~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~ 79 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVE-PSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE 79 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB--GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCccee-ecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence 46899999 79999999999999995 68888763221 111111 0 000 112345666666
Q ss_pred CCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 65 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
++ +.+.+.++++++|+||.+.. +. ..-..+.+.|++.+ ..+|+.++.+
T Consensus 80 ~~-~~~~~~~~~~~~d~vi~~~d--------~~--------~~~~~l~~~~~~~~--~p~i~~~~~g 127 (135)
T PF00899_consen 80 KI-DEENIEELLKDYDIVIDCVD--------SL--------AARLLLNEICREYG--IPFIDAGVNG 127 (135)
T ss_dssp HC-SHHHHHHHHHTSSEEEEESS--------SH--------HHHHHHHHHHHHTT---EEEEEEEET
T ss_pred cc-ccccccccccCCCEEEEecC--------CH--------HHHHHHHHHHHHcC--CCEEEEEeec
Confidence 76 55677888899999998732 11 11235666888888 4777777643
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0006 Score=57.18 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=56.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-CCeEEEE-EeCCchhhchhhhhhcCCCCCCCeEEE-ecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-GYSVRTT-VRSDPEQKRDLSFLTNLPRASERLQIF-NADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~v 82 (243)
++|.|+||||++|..+++.|.+. +.++..+ ++++. ....+... . ..+... ..++.+. +..++++++|+|
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~--~----~~l~~~~~~~~~~~-~~~~~~~~~DvV 72 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEV--H----PHLRGLVDLNLEPI-DEEEIAEDADVV 72 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHh--C----ccccccCCceeecC-CHHHhhcCCCEE
Confidence 37999999999999999999877 5788755 43222 11111100 1 111111 1122211 234455679999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+.+... . ....+...+.+.| .++|=.|+..
T Consensus 73 f~alP~-------~----------~s~~~~~~~~~~G--~~VIDlS~~f 102 (346)
T TIGR01850 73 FLALPH-------G----------VSAELAPELLAAG--VKVIDLSADF 102 (346)
T ss_pred EECCCc-------h----------HHHHHHHHHHhCC--CEEEeCChhh
Confidence 876432 1 1345566666667 6888888864
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0003 Score=51.80 Aligned_cols=75 Identities=13% Similarity=0.101 Sum_probs=48.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.++|+|+|+ |.+|..+++.|.+.| ++|.+.+| +.+....... .. ....+..+..+ ..++++++|+|
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r-~~~~~~~~~~--~~-----~~~~~~~~~~~---~~~~~~~~Dvv 85 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR-TLEKAKALAE--RF-----GELGIAIAYLD---LEELLAEADLI 85 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC-CHHHHHHHHH--HH-----hhcccceeecc---hhhccccCCEE
Confidence 4578999995 999999999999986 78999998 5433222111 11 11111223333 33447889999
Q ss_pred EEeeeccC
Q 026091 83 IHVAAPID 90 (243)
Q Consensus 83 i~~a~~~~ 90 (243)
|++.....
T Consensus 86 i~~~~~~~ 93 (155)
T cd01065 86 INTTPVGM 93 (155)
T ss_pred EeCcCCCC
Confidence 99986543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0012 Score=52.58 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=72.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEE-----EecCCCChhhHHHHhcc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI-----FNADLNNPESFDAAIAG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~D~~d~~~~~~~~~~ 78 (243)
.+-||.|.||.|.||..|.-.| +....|.-+.-.+-... +.....+.+ ......-.+.+++.+++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~---------~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~ 96 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANT---------PGVAADLSHINTNSSVVGFTGADGLENALKG 96 (345)
T ss_pred CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccC---------CcccccccccCCCCceeccCChhHHHHHhcC
Confidence 3568999999999999988644 56655544433222111 000001111 11223345799999999
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+|+||--||.....- ....+.+.+|..-...|..++.+..+-..+.++|-
T Consensus 97 advVvIPAGVPRKPG-MTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 97 ADVVVIPAGVPRKPG-MTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CCEEEecCCCCCCCC-CcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 999998888755311 22347799999999999999999873334555553
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0044 Score=51.00 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=68.6
Q ss_pred EEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhc-hhhhhhcCCCC-CCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKR-DLSFLTNLPRA-SERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
|.|+|| |.+|+.++..|+.+|. +|++++++ ++... ....+...... .....+ ... .| .. .++++|+||.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~-e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~~-~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIV-EGLPQGKALDISQAAPILGSDTKV-TGT-ND---YE-DIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCC-CcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---HH-HhCCCCEEEE
Confidence 568996 9999999999988876 99999984 33221 11111111000 111111 110 12 33 4689999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+++...... ....+.+..|+.-...+++.+.+..+-..+|..|
T Consensus 73 t~g~p~~~~-~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 73 TAGIPRKPG-MSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred ecCCCCCcC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 998654422 3344677889998999999888887233444444
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.001 Score=52.18 Aligned_cols=34 Identities=38% Similarity=0.532 Sum_probs=31.1
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+|.|+||+|.+|+++++.|.+.|++|.+.+| +++
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r-~~~ 35 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSR-DLE 35 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEc-CHH
Confidence 7999999999999999999999999999988 443
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00086 Score=50.13 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=45.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|+|+|+.+.+|..+++.|.++|.+|.++.| +. +.+.+.++++|+||
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r-~~-----------------------------~~l~~~l~~aDiVI 92 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS-KT-----------------------------KNLKEHTKQADIVI 92 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC-Cc-----------------------------hhHHHHHhhCCEEE
Confidence 5689999998667899999999999999988888 21 35567788899999
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
.+.+..
T Consensus 93 sat~~~ 98 (168)
T cd01080 93 VAVGKP 98 (168)
T ss_pred EcCCCC
Confidence 886653
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00041 Score=52.80 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=28.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
|||.|.| .||+|..++..|++.|++|++++. +++..
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~-~~~~v 36 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDI-DEEKV 36 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S--HHHH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeC-ChHHH
Confidence 4899998 999999999999999999999999 55433
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0033 Score=49.57 Aligned_cols=106 Identities=23% Similarity=0.268 Sum_probs=64.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+.++|+|.| +|.+|+++++.|+..|. ++++++.+ .-....+.+ +.+. ...-+++.+
T Consensus 20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D-~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~i~~~ 96 (228)
T cd00757 20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDD-VVELSNLQRQILHTEADVGQPKAEAAAERLRAI-NPDVEIEAY 96 (228)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC-EEcCcccccccccChhhCCChHHHHHHHHHHHh-CCCCEEEEe
Confidence 357999999 89999999999999994 67666542 111111111 1110 112245555
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
..++ +.+.+.++++++|+||.+.. .+ . .-..+.+.|++.+ ..+|+.+..+
T Consensus 97 ~~~i-~~~~~~~~~~~~DvVi~~~d--------~~-~-------~r~~l~~~~~~~~--ip~i~~g~~g 146 (228)
T cd00757 97 NERL-DAENAEELIAGYDLVLDCTD--------NF-A-------TRYLINDACVKLG--KPLVSGAVLG 146 (228)
T ss_pred ccee-CHHHHHHHHhCCCEEEEcCC--------CH-H-------HHHHHHHHHHHcC--CCEEEEEecc
Confidence 5555 34667788889999997742 11 1 1134667788877 4666665443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0014 Score=55.09 Aligned_cols=35 Identities=29% Similarity=0.518 Sum_probs=29.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSD 39 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 39 (243)
+.+|+|+||||++|+.+++.|.+.. .++.++.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 5799999999999999999998775 4888886633
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0019 Score=57.92 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=55.4
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ 85 (243)
.|+|.| .|-+|+++++.|.++|++|++++. +++..+..+ + .+...+.+|.+|++.++++ ++++|.++-+
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~-d~~~~~~~~---~-----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIET-SRTRVDELR---E-----RGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---H-----CCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 688888 899999999999999999999998 654443332 2 3789999999999999877 4678877644
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0034 Score=48.87 Aligned_cols=106 Identities=19% Similarity=0.339 Sum_probs=63.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhh-------------------hhhcCCCCCCCeEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLS-------------------FLTNLPRASERLQIFN 63 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 63 (243)
..++|+|.| +|.+|+.+++.|+..|. ++++++.+.-+ ...+. .+... ...-+++.+.
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve-~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-np~v~v~~~~ 103 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVE-PSNLNRQQYFISQIGMPKVEALKENLLEI-NPFVEIEAHN 103 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEec-cccccccEeehhhCCChHHHHHHHHHHHH-CCCCEEEEEe
Confidence 357899999 79999999999999995 58888774211 11111 11111 1123455555
Q ss_pred cCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecce
Q 026091 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSAS 131 (243)
Q Consensus 64 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~ 131 (243)
..+++ +.+.++++++|+||.+. +.+. .-..+.+.|.+. + ..+|+.+...
T Consensus 104 ~~i~~-~~~~~~~~~~DvVI~a~--------D~~~--------~r~~l~~~~~~~~~--~p~I~~~~~~ 153 (212)
T PRK08644 104 EKIDE-DNIEELFKDCDIVVEAF--------DNAE--------TKAMLVETVLEHPG--KKLVAASGMA 153 (212)
T ss_pred eecCH-HHHHHHHcCCCEEEECC--------CCHH--------HHHHHHHHHHHhCC--CCEEEeehhh
Confidence 55544 45667888999999762 2221 122455667776 6 4677766543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00094 Score=58.15 Aligned_cols=73 Identities=30% Similarity=0.459 Sum_probs=56.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
+++|+|+|+ |.+|+.+++.|.+.|++|+++.+ +++....+... ..++..+.+|.++.+.+.++ ++++|+||
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~-~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~~~~a~~vi 302 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIER-DPERAEELAEE------LPNTLVLHGDGTDQELLEEEGIDEADAFI 302 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence 578999995 99999999999999999999998 55433222211 23578899999999998765 46789887
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
-+
T Consensus 303 ~~ 304 (453)
T PRK09496 303 AL 304 (453)
T ss_pred EC
Confidence 44
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00034 Score=52.16 Aligned_cols=64 Identities=25% Similarity=0.284 Sum_probs=43.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
|++|.++| .|-+|+.+++.|++.|++|.+..| +++..+.+. .. + ..-.++..++++++|+|+-
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~-~~~~~~~~~---~~-----g-------~~~~~s~~e~~~~~dvvi~ 63 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDR-SPEKAEALA---EA-----G-------AEVADSPAEAAEQADVVIL 63 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEES-SHHHHHHHH---HT-----T-------EEEESSHHHHHHHBSEEEE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeecc-chhhhhhhH---Hh-----h-------hhhhhhhhhHhhcccceEe
Confidence 57999999 799999999999999999999999 553332222 11 2 2222355566677788775
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 64 ~ 64 (163)
T PF03446_consen 64 C 64 (163)
T ss_dssp -
T ss_pred e
Confidence 5
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0058 Score=47.06 Aligned_cols=108 Identities=20% Similarity=0.235 Sum_probs=65.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh----------------------hhcCCCCCCCeEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF----------------------LTNLPRASERLQI 61 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----------------------~~~~~~~~~~~~~ 61 (243)
..+|+|.|+ |.+|+++++.|+..| .++++++.+.-+ ...+.+ +.+. ...-+++.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve-~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~ 95 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVS-TEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSI 95 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCC-hhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEE
Confidence 578999995 559999999999999 568888763221 111110 1111 12234555
Q ss_pred EecCCCC-hhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceee
Q 026091 62 FNADLNN-PESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTV 133 (243)
Q Consensus 62 ~~~D~~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~ 133 (243)
+..++.+ .+...++++++|+||.+. ++... -..+-+.|++.+ ..+|+.++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~dvVi~~~--------d~~~~--------~~~ln~~c~~~~--ip~i~~~~~G~~ 150 (198)
T cd01485 96 VEEDSLSNDSNIEEYLQKFTLVIATE--------ENYER--------TAKVNDVCRKHH--IPFISCATYGLI 150 (198)
T ss_pred EecccccchhhHHHHHhCCCEEEECC--------CCHHH--------HHHHHHHHHHcC--CCEEEEEeecCE
Confidence 5555542 455677788899998652 12211 224557788888 478888775533
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0011 Score=54.00 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=49.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++++|+| .|.+|+.+++.|...|++|++..| ++...... ... +...+ +.+.+.+.++++|+||
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R-~~~~~~~~---~~~-----g~~~~-----~~~~l~~~l~~aDiVi 214 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGAR-SSADLARI---TEM-----GLIPF-----PLNKLEEKVAEIDIVI 214 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH---HHC-----CCeee-----cHHHHHHHhccCCEEE
Confidence 468999999 599999999999999999999999 54332221 111 22221 2456777888999999
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
++.
T Consensus 215 nt~ 217 (287)
T TIGR02853 215 NTI 217 (287)
T ss_pred ECC
Confidence 875
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0005 Score=57.46 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=24.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRT 34 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~ 34 (243)
+|+|+||||++|..+++.|.+++|.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~ 28 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDK 28 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhh
Confidence 5899999999999999999998876543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0035 Score=51.90 Aligned_cols=143 Identities=16% Similarity=0.122 Sum_probs=83.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|+|+|+ |.+|...++.+...|++|++++| ++++.+....+. ..+++..- |++...++-+.+|++|.
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~-~~~K~e~a~~lG-------Ad~~i~~~--~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITR-SEEKLELAKKLG-------ADHVINSS--DSDALEAVKEIADAIID 235 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeC-ChHHHHHHHHhC-------CcEEEEcC--CchhhHHhHhhCcEEEE
Confidence 579999995 59999999999889999999999 665554444442 22333332 56555555555999998
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+++ .. ++ ...++.++..| +++.++-.. ..+ ...++.. .-....+. -..++
T Consensus 236 tv~--~~----~~-----------~~~l~~l~~~G---~~v~vG~~~---~~~--~~~~~~~----~li~~~~~-i~GS~ 285 (339)
T COG1064 236 TVG--PA----TL-----------EPSLKALRRGG---TLVLVGLPG---GGP--IPLLPAF----LLILKEIS-IVGSL 285 (339)
T ss_pred CCC--hh----hH-----------HHHHHHHhcCC---EEEEECCCC---Ccc--cCCCCHH----HhhhcCeE-EEEEe
Confidence 876 11 11 13444555555 787776431 010 0000000 00001111 11235
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEE
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTI 189 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~ 189 (243)
.-++...+++++. +.+.++...+.
T Consensus 286 ~g~~~d~~e~l~f-~~~g~Ikp~i~ 309 (339)
T COG1064 286 VGTRADLEEALDF-AAEGKIKPEIL 309 (339)
T ss_pred cCCHHHHHHHHHH-HHhCCceeeEE
Confidence 6667788887765 45667766654
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=56.17 Aligned_cols=67 Identities=19% Similarity=0.334 Sum_probs=52.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|++|+|+|+ |.+|+.+++++.+.|++|++++. ++.... .. -.-+.+.+|..|.+.+.++++.+|+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~-~~~~pa--~~--------~ad~~~~~~~~D~~~l~~~a~~~dvit 68 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDP-DPDSPA--AQ--------VADEVIVADYDDVAALRELAEQCDVIT 68 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CCCCch--hH--------hCceEEecCCCCHHHHHHHHhcCCEEE
Confidence 578999995 89999999999999999999988 432211 10 022567789999999999999999864
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00074 Score=51.10 Aligned_cols=66 Identities=23% Similarity=0.180 Sum_probs=45.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|.|+| .|.||+.+++.|..-|.+|++.+|+..... ... .. .+ ...++.++++++|+|+
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~-~~~---~~-----~~--------~~~~l~ell~~aDiv~ 96 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE-GAD---EF-----GV--------EYVSLDELLAQADIVS 96 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH-HHH---HT-----TE--------EESSHHHHHHH-SEEE
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh-hcc---cc-----cc--------eeeehhhhcchhhhhh
Confidence 468999999 899999999999999999999999444221 111 00 11 2346778888899988
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+..
T Consensus 97 ~~~p 100 (178)
T PF02826_consen 97 LHLP 100 (178)
T ss_dssp E-SS
T ss_pred hhhc
Confidence 7754
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0013 Score=56.51 Aligned_cols=39 Identities=18% Similarity=0.151 Sum_probs=33.8
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
|. +++|.|+| .|++|..++..|++.|++|++.+| ++...
T Consensus 1 m~--~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~-~~~~v 39 (415)
T PRK11064 1 MS--FETISVIG-LGYIGLPTAAAFASRQKQVIGVDI-NQHAV 39 (415)
T ss_pred CC--ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeC-CHHHH
Confidence 54 57899999 899999999999999999999999 55433
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0016 Score=53.43 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=49.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++++|+| .|.+|+.+++.|...|.+|++..| ++....... .. +.+++ ..+.+.+.++++|+||
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r-~~~~~~~~~---~~-----G~~~~-----~~~~l~~~l~~aDiVI 215 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGAR-KSAHLARIT---EM-----GLSPF-----HLSELAEEVGKIDIIF 215 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---Hc-----CCeee-----cHHHHHHHhCCCCEEE
Confidence 468999999 588999999999999999999999 543322221 11 22322 2356777888999999
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
+++
T Consensus 216 ~t~ 218 (296)
T PRK08306 216 NTI 218 (296)
T ss_pred ECC
Confidence 975
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0075 Score=49.56 Aligned_cols=169 Identities=14% Similarity=0.102 Sum_probs=97.3
Q ss_pred EecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCC-CCCeEEEecCCCChhhHHHHhccccEEEEee
Q 026091 10 VTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRA-SERLQIFNADLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 10 vtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 86 (243)
|+| +|.+|++++..|+..+ .++.+++++..........+.+.... ....++... + .+.++++|+||-+|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEEECC
Confidence 457 5999999999998887 36888888443233333333322111 122333221 2 35677899999999
Q ss_pred eccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHh
Q 026091 87 APIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKL 166 (243)
Q Consensus 87 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~ 166 (243)
|..... .....+.++.|..-...+.+.++++++-..++.+|-..-.-.. .......+ |+....+.
T Consensus 73 g~~rk~-g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~----~~~~~sg~----------p~~~viG~ 137 (299)
T TIGR01771 73 GAPQKP-GETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTY----VAWKLSGF----------PKNRVIGS 137 (299)
T ss_pred CCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH----HHHHHhCC----------CHHHEEec
Confidence 975432 2345688999999999999999998733455655532110000 00000000 01111222
Q ss_pred -hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 167 -SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 167 -sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
+....-++-..+++..+++..-++. .++|.+....
T Consensus 138 gt~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG~s~ 173 (299)
T TIGR01771 138 GTVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHGDSE 173 (299)
T ss_pred cchHHHHHHHHHHHHHhCcCcCeEEE-EEEecCCCce
Confidence 2333345555666777888888885 5899864444
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00095 Score=54.30 Aligned_cols=73 Identities=21% Similarity=0.318 Sum_probs=47.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++++|+|+ |.+|++++..|.+.| .+|+++.| +.+....+.. .... ...+.+ ++ ...+.+.++|+|
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R-~~~~a~~l~~--~~~~-~~~~~~---~~----~~~~~~~~~Div 189 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNR-TVERAEELAK--LFGA-LGKAEL---DL----ELQEELADFDLI 189 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHH--Hhhh-ccceee---cc----cchhccccCCEE
Confidence 4578999995 999999999999999 79999999 5443322221 1100 001121 11 223556778999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|++...
T Consensus 190 InaTp~ 195 (278)
T PRK00258 190 INATSA 195 (278)
T ss_pred EECCcC
Confidence 999754
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0012 Score=53.63 Aligned_cols=102 Identities=16% Similarity=0.199 Sum_probs=71.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..+++.|+|+.| +|+--++.....|++|+++++++..+++..+.| +.+++..-..|++.+.++.+-.|.++
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L--------GAd~fv~~~~d~d~~~~~~~~~dg~~ 251 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL--------GADVFVDSTEDPDIMKAIMKTTDGGI 251 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc--------CcceeEEecCCHHHHHHHHHhhcCcc
Confidence 358999999888 999999988888999999999654454444433 55666666668888888887777777
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
|++-.... -++ .-+++.++..| ++|+++-..
T Consensus 252 ~~v~~~a~---~~~-----------~~~~~~lk~~G---t~V~vg~p~ 282 (360)
T KOG0023|consen 252 DTVSNLAE---HAL-----------EPLLGLLKVNG---TLVLVGLPE 282 (360)
T ss_pred eeeeeccc---cch-----------HHHHHHhhcCC---EEEEEeCcC
Confidence 77643221 111 13455566555 888888644
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0028 Score=52.44 Aligned_cols=80 Identities=24% Similarity=0.241 Sum_probs=48.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-h----hcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-L----TNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
.++|.|+| +|-+|+.++..|+..|++|.+.++ +++..+.... + ......+.........++-..++.++++++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDP-APGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeC-CHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 47899999 799999999999999999999999 5433222111 1 000000000000011222223567888999
Q ss_pred cEEEEee
Q 026091 80 TGVIHVA 86 (243)
Q Consensus 80 d~vi~~a 86 (243)
|.|+-+.
T Consensus 85 DlViEav 91 (321)
T PRK07066 85 DFIQESA 91 (321)
T ss_pred CEEEECC
Confidence 9999763
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00094 Score=54.53 Aligned_cols=40 Identities=25% Similarity=0.248 Sum_probs=34.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
|+..+++|.|+| +|.+|+.++..|+..|++|++.++ +++.
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~-~~~~ 40 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGVDVLVFET-TEEL 40 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEEC-CHHH
Confidence 555667999999 599999999999999999999999 5543
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00072 Score=50.09 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=47.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
||.|.| +|..|.+++..|.++|++|.+..| +++..+.+..-........+++.- ..+.=..++++++++.|+||-+
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~-~~~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~Iiia 76 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGR-DEEQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIA 76 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETS-CHHHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEec
Confidence 689999 799999999999999999999999 654333333221111111111111 1121234667888999998855
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0016 Score=54.62 Aligned_cols=76 Identities=18% Similarity=0.111 Sum_probs=50.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~ 79 (243)
..++|||.||+|.+|++.++.+...|...++.++ +.+..+..+.+.. -...|.++++..+...+ ++
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k~lGA---------d~vvdy~~~~~~e~~kk~~~~~~ 226 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVKKLGA---------DEVVDYKDENVVELIKKYTGKGV 226 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHHHcCC---------cEeecCCCHHHHHHHHhhcCCCc
Confidence 4579999999999999999988888833334444 3323333333221 12346777666555555 59
Q ss_pred cEEEEeeecc
Q 026091 80 TGVIHVAAPI 89 (243)
Q Consensus 80 d~vi~~a~~~ 89 (243)
|+|+.|.+..
T Consensus 227 DvVlD~vg~~ 236 (347)
T KOG1198|consen 227 DVVLDCVGGS 236 (347)
T ss_pred cEEEECCCCC
Confidence 9999998763
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0014 Score=53.16 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=43.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|+|+|++|.+|+.++..|+++|.+|+++.| +. ..+.+.++++|+||
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~t-----------------------------~~L~~~~~~aDIvI 207 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-RT-----------------------------QNLPELVKQADIIV 207 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-Cc-----------------------------hhHHHHhccCCEEE
Confidence 5789999999999999999999999999888877 21 12344457889999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
++.|
T Consensus 208 ~AtG 211 (283)
T PRK14192 208 GAVG 211 (283)
T ss_pred EccC
Confidence 9885
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0093 Score=47.12 Aligned_cols=106 Identities=21% Similarity=0.270 Sum_probs=63.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh---------------------hhhcCCCCCCCeEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS---------------------FLTNLPRASERLQI 61 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---------------------~~~~~~~~~~~~~~ 61 (243)
+.++|+|.| +|.+|+++++.|+..| .++++++.+..+ ..++. .+... ..+-.++.
T Consensus 26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve-~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~ 102 (231)
T PRK08328 26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPE-LSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIET 102 (231)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccC-hhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEE
Confidence 357899999 7999999999999999 467777653211 11111 01111 12234455
Q ss_pred EecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 62 ~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+...+ +.+.+.++++++|+||.+. +... .-..+-++|++.+ ..+|+.++.+
T Consensus 103 ~~~~~-~~~~~~~~l~~~D~Vid~~--------d~~~--------~r~~l~~~~~~~~--ip~i~g~~~g 153 (231)
T PRK08328 103 FVGRL-SEENIDEVLKGVDVIVDCL--------DNFE--------TRYLLDDYAHKKG--IPLVHGAVEG 153 (231)
T ss_pred EeccC-CHHHHHHHHhcCCEEEECC--------CCHH--------HHHHHHHHHHHcC--CCEEEEeecc
Confidence 55555 3455777888999999763 1111 1123445777887 4577766654
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0091 Score=47.57 Aligned_cols=72 Identities=19% Similarity=0.188 Sum_probs=55.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
|++|+|.|||+ =|+.+++.|.+.|+.|++.+. ..... . ....+..+.+-+.+.+.+.++++ ++++|
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Sva-t~~g~--~--------~~~~~~v~~G~l~~~~~l~~~l~~~~i~~V 69 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLA-GRTGG--P--------ADLPGPVRVGGFGGAEGLAAYLREEGIDLV 69 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEc-cCCCC--c--------ccCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence 67899999987 599999999999998887766 33211 0 12367788888889999999996 68999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|...-|
T Consensus 70 IDATHP 75 (248)
T PRK08057 70 IDATHP 75 (248)
T ss_pred EECCCc
Confidence 988533
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.008 Score=45.31 Aligned_cols=76 Identities=14% Similarity=0.261 Sum_probs=48.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCc--hhhc----------------hhhhhhcCCCCCCCeEEEecCCC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDP--EQKR----------------DLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
+|+|.| +|.+|+++++.|+..|. ++++++.+.- +... ....+.+. ...-+++.+...+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-np~v~i~~~~~~~~ 78 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-NPFVKIEAINIKID 78 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-CCCCEEEEEEeecC
Confidence 589999 79999999999999996 5888887431 1100 00011111 11234555555554
Q ss_pred ChhhHHHHhccccEEEEe
Q 026091 68 NPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 68 d~~~~~~~~~~~d~vi~~ 85 (243)
. +.+.++++++|+||.+
T Consensus 79 ~-~~~~~~l~~~DlVi~~ 95 (174)
T cd01487 79 E-NNLEGLFGDCDIVVEA 95 (174)
T ss_pred h-hhHHHHhcCCCEEEEC
Confidence 3 5677888999999976
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0098 Score=47.25 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=62.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+.++|+|.| .|.+|+++++.|+..| -++++++.+.- ...++.+ +... ...-+++.+
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~v-e~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i-np~v~i~~~ 99 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTV-SLSNLQRQVLHSDANIGQPKVESAKDALTQI-NPHIAINPI 99 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcc-cccCcccceeeeHhhCCCcHHHHHHHHHHHH-CCCcEEEEE
Confidence 357899999 7999999999999999 46777766322 1111111 1110 112234444
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
...+ +.+.+.++++++|+||.+. +.+. .-..+-++|.+.+ ..+|+-++.
T Consensus 100 ~~~i-~~~~~~~~~~~~DlVvd~~--------D~~~--------~r~~ln~~~~~~~--ip~v~~~~~ 148 (240)
T TIGR02355 100 NAKL-DDAELAALIAEHDIVVDCT--------DNVE--------VRNQLNRQCFAAK--VPLVSGAAI 148 (240)
T ss_pred eccC-CHHHHHHHhhcCCEEEEcC--------CCHH--------HHHHHHHHHHHcC--CCEEEEEec
Confidence 4333 3356777888999999773 2221 1234557788887 466765543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0019 Score=52.70 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=47.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhc-CCC-CCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTN-LPR-ASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
..|+++|.| +|+.+++++-.|.+.|. +|+++.| +.+..++.+.+.+ ... ....+.. .++.+.+.+.+.+.++|
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nR-t~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aD 198 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASAD 198 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeC-CccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCC
Confidence 357899999 57779999999999884 7999999 4321122222222 110 0111222 23333334555667889
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
+|||+..
T Consensus 199 ivINaTp 205 (288)
T PRK12749 199 ILTNGTK 205 (288)
T ss_pred EEEECCC
Confidence 9999863
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0015 Score=54.32 Aligned_cols=36 Identities=36% Similarity=0.485 Sum_probs=31.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
++|.|+| +|.+|+.++..|++.|++|.+..| ++...
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r-~~~~~ 37 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWAR-DPEQA 37 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEEC-CHHHH
Confidence 5899999 699999999999999999999999 55433
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.001 Score=57.06 Aligned_cols=75 Identities=13% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++|+|.| +|.+|+.++++|.+.| .++++..| +.+....+.. .. .. +.....+.+.+.+.++|+|
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nR-t~~ra~~La~--~~----~~-----~~~~~~~~l~~~l~~aDiV 246 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANR-TIEKAQKITS--AF----RN-----ASAHYLSELPQLIKKADII 246 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHH--Hh----cC-----CeEecHHHHHHHhccCCEE
Confidence 468999999 5999999999999999 47888888 5543322221 11 01 1233346778888899999
Q ss_pred EEeeeccCC
Q 026091 83 IHVAAPIDI 91 (243)
Q Consensus 83 i~~a~~~~~ 91 (243)
|++.+....
T Consensus 247 I~aT~a~~~ 255 (414)
T PRK13940 247 IAAVNVLEY 255 (414)
T ss_pred EECcCCCCe
Confidence 999876443
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0079 Score=51.13 Aligned_cols=106 Identities=18% Similarity=0.226 Sum_probs=63.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCch------------------hh-chhhhhhcCCCCCCCeEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPE------------------QK-RDLSFLTNLPRASERLQIFN 63 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~-~~~~~~~~~~~~~~~~~~~~ 63 (243)
+.++|+|.| +|.+|+++++.|+..|. ++++++++.-+ +. .....+.+. ...-+++.+.
T Consensus 134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~~ 211 (376)
T PRK08762 134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAAL-NPDVQVEAVQ 211 (376)
T ss_pred hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHH-CCCCEEEEEe
Confidence 357899998 79999999999999995 78888874110 00 001111111 0112334444
Q ss_pred cCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 64 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
..++ .+.+.++++++|+||++.. .+. .-..+.++|++.+ ..+|+.+..
T Consensus 212 ~~~~-~~~~~~~~~~~D~Vv~~~d--------~~~--------~r~~ln~~~~~~~--ip~i~~~~~ 259 (376)
T PRK08762 212 ERVT-SDNVEALLQDVDVVVDGAD--------NFP--------TRYLLNDACVKLG--KPLVYGAVF 259 (376)
T ss_pred ccCC-hHHHHHHHhCCCEEEECCC--------CHH--------HHHHHHHHHHHcC--CCEEEEEec
Confidence 4443 3567778889999998742 221 1123557788887 466766543
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0099 Score=48.22 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=63.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhh-----hcC------------C--CCCCCeEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFL-----TNL------------P--RASERLQIFN 63 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-----~~~------------~--~~~~~~~~~~ 63 (243)
+..+|+|+| +|.+|+++++.|+..| -++.+++.+. -...++.+- .+. . ...-+++.+.
T Consensus 26 ~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~-Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 26 RNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDV-FELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCC-cchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 357899999 7999999999999998 4677776632 111111110 000 0 1233455555
Q ss_pred cCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 64 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
..++ .+.+.++++++|+||.+. |.+ +...-..+.++|++.+ ..+|+.|.
T Consensus 104 ~~l~-~~n~~~ll~~~DlVvD~~--------D~~------~~~~r~~ln~~c~~~~--iP~V~~~~ 152 (287)
T PRK08223 104 EGIG-KENADAFLDGVDVYVDGL--------DFF------EFDARRLVFAACQQRG--IPALTAAP 152 (287)
T ss_pred cccC-ccCHHHHHhCCCEEEECC--------CCC------cHHHHHHHHHHHHHcC--CCEEEEec
Confidence 5554 456778889999998552 211 0111235566788888 46676544
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.012 Score=42.75 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=61.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhh--------------------hhhcCCCCCCCeEEEecC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLS--------------------FLTNLPRASERLQIFNAD 65 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~D 65 (243)
+|+|.| +|.+|+++++.|+..|. ++++++.+.-+ ...+. .+... ...-+++.+..+
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~-~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-~p~v~i~~~~~~ 77 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVE-LSNLNRQFLARQADIGKPKAEVAARRLNEL-NPGVNVTAVPEG 77 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcC-cchhhccccCChhHCCChHHHHHHHHHHHH-CCCcEEEEEeee
Confidence 589999 69999999999999996 67777653111 00100 01111 112344555555
Q ss_pred CCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 66 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+.+. ...+.++++|+||.+... . .....+.++|++.+ ..++..++..
T Consensus 78 ~~~~-~~~~~~~~~diVi~~~d~--------~--------~~~~~l~~~~~~~~--i~~i~~~~~g 124 (143)
T cd01483 78 ISED-NLDDFLDGVDLVIDAIDN--------I--------AVRRALNRACKELG--IPVIDAGGLG 124 (143)
T ss_pred cChh-hHHHHhcCCCEEEECCCC--------H--------HHHHHHHHHHHHcC--CCEEEEcCCC
Confidence 5443 336777889999977421 1 12345667888887 4677776643
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0015 Score=54.72 Aligned_cols=28 Identities=25% Similarity=0.426 Sum_probs=24.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS 31 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~ 31 (243)
+..+|.|.||||++|..+++.|.+++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 4568999999999999999999987763
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.011 Score=45.41 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=63.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh--------------------hhhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS--------------------FLTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 62 (243)
+.++|+|.| .|.+|+++++.|+..| .++++++.+.-+ ...+. .+... ...-+++.+
T Consensus 20 ~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve-~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~ 96 (197)
T cd01492 20 RSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVT-EEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVD 96 (197)
T ss_pred HhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCccc-HhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence 357899999 5669999999999999 467777653221 11111 01111 122345555
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceee
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTV 133 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~ 133 (243)
...+. +...+.++++|+||.+.. +.... ..+-+.|++.+ + .+++.++.+-+
T Consensus 97 ~~~~~--~~~~~~~~~~dvVi~~~~--------~~~~~--------~~ln~~c~~~~-i-p~i~~~~~G~~ 147 (197)
T cd01492 97 TDDIS--EKPEEFFSQFDVVVATEL--------SRAEL--------VKINELCRKLG-V-KFYATGVHGLF 147 (197)
T ss_pred ecCcc--ccHHHHHhCCCEEEECCC--------CHHHH--------HHHHHHHHHcC-C-CEEEEEecCCE
Confidence 55554 234567788999986621 12111 23446788888 4 67877775533
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0026 Score=53.86 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=53.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|+|+|+ |-+|...++.|...|.+|.+++| ++.....+.. .. . ..+..+..+.+.+.+.++++|+||+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~-~~~~~~~l~~--~~----g--~~v~~~~~~~~~l~~~l~~aDvVI~ 236 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDI-NIDRLRQLDA--EF----G--GRIHTRYSNAYEIEDAVKRADLLIG 236 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHH--hc----C--ceeEeccCCHHHHHHHHccCCEEEE
Confidence 467999985 99999999999999999999998 5433222211 01 1 1223455677888889999999999
Q ss_pred eeec
Q 026091 85 VAAP 88 (243)
Q Consensus 85 ~a~~ 88 (243)
++..
T Consensus 237 a~~~ 240 (370)
T TIGR00518 237 AVLI 240 (370)
T ss_pred cccc
Confidence 8754
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0066 Score=53.30 Aligned_cols=76 Identities=20% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--------------h-
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--------------P- 69 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--------------~- 69 (243)
..+|+|+| .|-+|...++.+...|.+|+++++ +++..+..+.+ +.+++..|..+ .
T Consensus 165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~-~~~rle~aesl--------GA~~v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDT-RPEVAEQVESM--------GAEFLELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEEeccccccccccchhhhcchhH
Confidence 57999999 799999999999999999999999 66555444433 33433333221 1
Q ss_pred -h----hHHHHhccccEEEEeeeccC
Q 026091 70 -E----SFDAAIAGCTGVIHVAAPID 90 (243)
Q Consensus 70 -~----~~~~~~~~~d~vi~~a~~~~ 90 (243)
+ .+.+..+++|+||.+++...
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCc
Confidence 1 11222357999999998644
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0086 Score=49.89 Aligned_cols=74 Identities=23% Similarity=0.206 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA--GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~ 79 (243)
.++|||+||+|.+|+..++.+...|+.+++++. ++++.+.+..+. .-+.+. ..+. +.+.++.. ++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~-s~~k~~~~~~lG-------Ad~vi~--y~~~~~~~~v~~~t~g~gv 212 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLELLKELG-------ADHVIN--YREEDFVEQVRELTGGKGV 212 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHhcC-------CCEEEc--CCcccHHHHHHHHcCCCCc
Confidence 478999999999999999999889977666666 333322333221 112222 3332 34444443 58
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+|+.+.|.
T Consensus 213 Dvv~D~vG~ 221 (326)
T COG0604 213 DVVLDTVGG 221 (326)
T ss_pred eEEEECCCH
Confidence 999987553
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0016 Score=55.20 Aligned_cols=33 Identities=30% Similarity=0.459 Sum_probs=31.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+++|.|+||+|.+|+.+++.|.+.|++|.+.+|
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCC
Confidence 478999999999999999999999999999998
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0014 Score=54.95 Aligned_cols=32 Identities=41% Similarity=0.587 Sum_probs=30.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|++|.|+| +|.+|+.++..|.+.|++|++++|
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r 33 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGR 33 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEec
Confidence 56899999 899999999999999999999998
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0061 Score=51.12 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=52.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeE-EEecC-----CCChhhHHHHhccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ-IFNAD-----LNNPESFDAAIAGC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D-----~~d~~~~~~~~~~~ 79 (243)
|||.|+| +||+|.-..--|++.||+|++++. ++.+.+.+..- ..|...++++ +++-+ ++=..+..+++++.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDi-d~~KV~~ln~g-~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a 77 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDI-DESKVELLNKG-ISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA 77 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHhCC-CCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence 4799999 999999999999999999999999 65443333211 1222222321 11112 22224566777888
Q ss_pred cEEEEeeeccC
Q 026091 80 TGVIHVAAPID 90 (243)
Q Consensus 80 d~vi~~a~~~~ 90 (243)
|+++-+.|...
T Consensus 78 dv~fIavgTP~ 88 (414)
T COG1004 78 DVVFIAVGTPP 88 (414)
T ss_pred CEEEEEcCCCC
Confidence 99887776543
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0033 Score=53.75 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=52.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
.|+|+|+| +|..|..+++++.+.|++|++++. .+...... . .-..+..|..|.+.+.++++ ++|.|
T Consensus 12 ~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~-~~~~~~~~--~--------ad~~~~~~~~d~~~l~~~~~~~~id~v 79 (395)
T PRK09288 12 ATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDR-YANAPAMQ--V--------AHRSHVIDMLDGDALRAVIEREKPDYI 79 (395)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCCchHH--h--------hhheEECCCCCHHHHHHHHHHhCCCEE
Confidence 46899999 589999999999999999999988 44221110 0 11356778889999999887 78988
Q ss_pred EEe
Q 026091 83 IHV 85 (243)
Q Consensus 83 i~~ 85 (243)
+..
T Consensus 80 i~~ 82 (395)
T PRK09288 80 VPE 82 (395)
T ss_pred EEe
Confidence 754
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0019 Score=55.88 Aligned_cols=33 Identities=33% Similarity=0.652 Sum_probs=30.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|.|+||+|.+|+.+++.|.+.|++|.+.+|+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 379999999999999999999999999999994
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.003 Score=54.81 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=52.0
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
.+|+||||+| ||-.|.+|++++..+|++|+.++- .... . . ..+++.+.++
T Consensus 255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G-p~~~-------~-~---p~~v~~i~V~-- 320 (475)
T PRK13982 255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG-PVDL-------A-D---PQGVKVIHVE-- 320 (475)
T ss_pred CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC-CcCC-------C-C---CCCceEEEec--
Confidence 5789999986 799999999999999999999975 2210 0 1 2356655443
Q ss_pred ChhhHHHHhc---cccEEEEeeeccCC
Q 026091 68 NPESFDAAIA---GCTGVIHVAAPIDI 91 (243)
Q Consensus 68 d~~~~~~~~~---~~d~vi~~a~~~~~ 91 (243)
..+++.+.+. ..|++|++|++...
T Consensus 321 ta~eM~~av~~~~~~Di~I~aAAVaDy 347 (475)
T PRK13982 321 SARQMLAAVEAALPADIAIFAAAVADW 347 (475)
T ss_pred CHHHHHHHHHhhCCCCEEEEeccccce
Confidence 4444444442 27999999997554
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.013 Score=49.34 Aligned_cols=105 Identities=13% Similarity=0.089 Sum_probs=63.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+.++|+|.| +|.+|+++++.|+..| -++++++.+. -....+.+ +.++ ...-+++.+
T Consensus 27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~-ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~v~~~ 103 (355)
T PRK05597 27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDT-VDLSNLHRQVIHSTAGVGQPKAESAREAMLAL-NPDVKVTVS 103 (355)
T ss_pred hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE-EcccccccCcccChhHCCChHHHHHHHHHHHH-CCCcEEEEE
Confidence 457999999 6999999999999999 4677777632 11111111 1111 122345555
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
...++ .+...++++++|+||.+. +.+. .-..+-++|.+.+ ..+|+.+..
T Consensus 104 ~~~i~-~~~~~~~~~~~DvVvd~~--------d~~~--------~r~~~n~~c~~~~--ip~v~~~~~ 152 (355)
T PRK05597 104 VRRLT-WSNALDELRDADVILDGS--------DNFD--------TRHLASWAAARLG--IPHVWASIL 152 (355)
T ss_pred EeecC-HHHHHHHHhCCCEEEECC--------CCHH--------HHHHHHHHHHHcC--CCEEEEEEe
Confidence 55554 356667889999999774 2221 1123456777777 457766543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.016 Score=46.23 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=63.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh--------------------hhhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS--------------------FLTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 62 (243)
+.++|+|+|+ |.+|+++++.|+..| .++++++.+.- ....+. .+... ...-+++.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~v-e~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l-np~v~i~~~ 107 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTV-SLSNLQRQVLHDDATIGQPKVESARAALARI-NPHIAIETI 107 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEE-CcchhhhhhcCChhhCCChHHHHHHHHHHHH-CCCCEEEEE
Confidence 4579999995 999999999999999 46777765321 111111 11111 112345555
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
...++ .+.+.++++++|+||.+. +.+. .-..+.++|++.+ ..+|+.++
T Consensus 108 ~~~i~-~~~~~~~~~~~DiVi~~~--------D~~~--------~r~~ln~~~~~~~--ip~v~~~~ 155 (245)
T PRK05690 108 NARLD-DDELAALIAGHDLVLDCT--------DNVA--------TRNQLNRACFAAK--KPLVSGAA 155 (245)
T ss_pred eccCC-HHHHHHHHhcCCEEEecC--------CCHH--------HHHHHHHHHHHhC--CEEEEeee
Confidence 55554 456777889999999773 2221 1124556778877 45666544
|
|
| >KOG1496 consensus Malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0024 Score=49.72 Aligned_cols=171 Identities=18% Similarity=0.069 Sum_probs=90.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc---C--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH---G--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP--------- 69 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~---g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--------- 69 (243)
++-+|+||||+|.||.+++-.++.- | ..+++.--+.+..- . -++.+...+.|-
T Consensus 3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~---~----------~LegV~mELqD~a~PlL~~Vv 69 (332)
T KOG1496|consen 3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMM---S----------VLEGVKMELQDCALPLLKGVV 69 (332)
T ss_pred CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHH---H----------HHHHHHHHHHhhhhhHHHhhh
Confidence 4569999999999999999877642 1 22222221111100 0 111111122111
Q ss_pred --hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCC
Q 026091 70 --ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 70 --~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
..-.+.++++|+.|...+.... .-....+.+..|+.-...=-.+..++. +--+++.++-.+. . ......+.
T Consensus 70 attd~~~afkdv~~ailvGa~PR~-eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaN--T---Nali~~k~ 143 (332)
T KOG1496|consen 70 ATTDEVEAFKDVDVAILVGAMPRR-EGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPAN--T---NALILKKF 143 (332)
T ss_pred cccChhhhhccCcEEEEeccccCc-ccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccc--c---chhHHhhh
Confidence 2223456778988877665443 223345778888765444333333331 1124444433211 0 11111122
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICP 201 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~ 201 (243)
.|+- |..+-...++..-.+.+.+++.+.|+++.-+.--.|||.....
T Consensus 144 ApsI--------P~kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSsT 190 (332)
T KOG1496|consen 144 APSI--------PEKNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSST 190 (332)
T ss_pred CCCC--------chhcchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccccc
Confidence 1111 1123366777777788888888889999999999999975443
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=51.26 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=31.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
.++++|+|+ |.+|++++..|++.|++|.+..| +.+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R-~~~ 151 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANR-TVS 151 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC-CHH
Confidence 578999996 89999999999999999999998 543
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0056 Score=49.42 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=41.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|.|+| +|.+|+.+++.|.+. +.++.++..++++...... .. .+. .-.++++++++++|+|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a---~~----~~~-------~~~~~~~ell~~~DvVv 66 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLA---SK----TGA-------KACLSIDELVEDVDLVV 66 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHH---Hh----cCC-------eeECCHHHHhcCCCEEE
Confidence 5899999 799999999999876 4665555443543322211 10 011 11234556667899999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.++.
T Consensus 67 i~a~ 70 (265)
T PRK13304 67 ECAS 70 (265)
T ss_pred EcCC
Confidence 8863
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0013 Score=50.79 Aligned_cols=35 Identities=29% Similarity=0.337 Sum_probs=31.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP 40 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (243)
+.|+|+|+| .|.+|+++++.|.+.|++|++.++ ++
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~-~~ 61 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADI-NE 61 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcC-CH
Confidence 468999999 589999999999999999998887 44
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=41.46 Aligned_cols=31 Identities=29% Similarity=0.609 Sum_probs=26.9
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVR 37 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (243)
||.|+|++|.+|..+++.|.+. ++++.++..
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~ 32 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA 32 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence 5889999999999999999884 788888844
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0061 Score=52.48 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=30.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
+|.|+| +|++|..++..|++.|++|++.++ +++.
T Consensus 2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~-~~~~ 35 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDI-DQEK 35 (411)
T ss_pred EEEEEC-CCchhHHHHHHHHhcCCeEEEEEC-CHHH
Confidence 699999 899999999999999999999999 5543
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0023 Score=52.60 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
+|+||.|.||+||.|..|++.|..+. .++..++.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss 35 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISS 35 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeec
Confidence 36799999999999999999998875 56655554
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0058 Score=52.20 Aligned_cols=37 Identities=22% Similarity=0.121 Sum_probs=33.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+ ++|+|||||+...+|..+++.|.+.|++|++++..
T Consensus 1 ~~-~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 1 MN-TKKTVLITGARAPAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44 46899999999999999999999999999999883
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0019 Score=53.72 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=57.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh-hHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE-SFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~v 82 (243)
+++||+.| +||+...++..|.+++ -+|++.+| .....+.+ .. +..++.+..|+.+.+ .+.+.++..|.+
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~-~~~~~~~~---~~----~~~~~av~ldv~~~~~~L~~~v~~~D~v 72 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASR-TLKDAEAL---VK----GINIKAVSLDVADEELALRKEVKPLDLV 72 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehh-hHHHHHHH---hc----CCCccceEEEccchHHHHHhhhccccee
Confidence 67899999 8999999999998875 67888888 44322222 11 235899999999988 999999999998
Q ss_pred EEee
Q 026091 83 IHVA 86 (243)
Q Consensus 83 i~~a 86 (243)
+-+.
T Consensus 73 iSLl 76 (445)
T KOG0172|consen 73 ISLL 76 (445)
T ss_pred eeec
Confidence 8665
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.017 Score=50.35 Aligned_cols=121 Identities=15% Similarity=0.070 Sum_probs=71.7
Q ss_pred EecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEeeecc
Q 026091 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVAAPI 89 (243)
Q Consensus 10 vtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 89 (243)
|+||+|.+|.++++.|...|++|++..+ ........ ...++.-+..|.+..+...++.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~-~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~l~------------- 100 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANND-GGLTWAAG--------WGDRFGALVFDATGITDPADLK------------- 100 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCc-cccccccC--------cCCcccEEEEECCCCCCHHHHH-------------
Confidence 7888999999999999999999998766 33211000 0113333333444333222211
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHH
Q 026091 90 DIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKT 169 (243)
Q Consensus 90 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~ 169 (243)
..+ ......++...+ ..+||+++|...... ...|+.+|.
T Consensus 101 ---------~~~----~~~~~~l~~l~~---~griv~i~s~~~~~~-------------------------~~~~~~aka 139 (450)
T PRK08261 101 ---------ALY----EFFHPVLRSLAP---CGRVVVLGRPPEAAA-------------------------DPAAAAAQR 139 (450)
T ss_pred ---------HHH----HHHHHHHHhccC---CCEEEEEccccccCC-------------------------chHHHHHHH
Confidence 111 112222222222 358999998643210 013999999
Q ss_pred HHHHHHHHHHHHc--CccEEEEccCc
Q 026091 170 LAERAALEFAEEH--GLDLVTIIPSF 193 (243)
Q Consensus 170 ~~e~~~~~~~~~~--gi~~~~~rp~~ 193 (243)
+.+.+++.++++. +++...+.|+.
T Consensus 140 al~gl~rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 140 ALEGFTRSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEecCC
Confidence 9999999988774 78888887764
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.01 Score=45.75 Aligned_cols=80 Identities=15% Similarity=0.213 Sum_probs=50.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC--chhhchh-hhhhcC------------C--CCCCCeEEEecC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD--PEQKRDL-SFLTNL------------P--RASERLQIFNAD 65 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~-~~~~~~------------~--~~~~~~~~~~~D 65 (243)
+.++|+|.| +|.+|+.+++.|+..|. ++++++++. .+..... ....+. . ...-+++.+..+
T Consensus 20 ~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 20 EQATVAICG-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 357899999 69999999999999997 688888741 1111110 000000 0 112345555555
Q ss_pred CCChhhHHHHhccccEEEEe
Q 026091 66 LNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 66 ~~d~~~~~~~~~~~d~vi~~ 85 (243)
++ .+.+.++++++|+||-+
T Consensus 99 i~-~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 99 IT-EENIDKFFKDADIVCEA 117 (200)
T ss_pred CC-HhHHHHHhcCCCEEEEC
Confidence 54 46677888899999966
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0043 Score=50.28 Aligned_cols=56 Identities=14% Similarity=0.162 Sum_probs=46.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|+|+|+++.+|+.++..|.++|.+|+++.+ +. ..+.+.++++|+||
T Consensus 157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t-----------------------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RS-----------------------------KDMASYLKDADVIV 206 (286)
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-Cc-----------------------------hhHHHHHhhCCEEE
Confidence 5799999999999999999999999999998877 21 24667788899999
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
.+.|..
T Consensus 207 sAvg~p 212 (286)
T PRK14175 207 SAVGKP 212 (286)
T ss_pred ECCCCC
Confidence 887653
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0046 Score=50.41 Aligned_cols=73 Identities=23% Similarity=0.265 Sum_probs=47.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..++|+|+| +|..|++++..|.+.|. +|+++.| +....+.+. .+... ........ .+.+.+.++++|+
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR-~~~ka~~la~~l~~~---~~~~~~~~-----~~~~~~~~~~aDi 195 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDV-DPARAAALADELNAR---FPAARATA-----GSDLAAALAAADG 195 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHHHHhh---CCCeEEEe-----ccchHhhhCCCCE
Confidence 357899999 68899999999999996 7999999 443332222 22111 11122221 1234456678999
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
||++.
T Consensus 196 VInaT 200 (284)
T PRK12549 196 LVHAT 200 (284)
T ss_pred EEECC
Confidence 99994
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.01 Score=51.80 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=48.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEE----ec-CCCChhhHHHHhc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF----NA-DLNNPESFDAAIA 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~-D~~d~~~~~~~~~ 77 (243)
|++|.|.| +|++|..++..|++.| ++|+++++ ++...+.+..=. .+....++.-+ .+ .++=..++.+.++
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~-~~~~v~~l~~g~-~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~ 77 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDI-SVPRIDAWNSDQ-LPIYEPGLDEVVKQCRGKNLFFSTDVEKHVA 77 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEEC-CHHHHHHHHcCC-CccCCCCHHHHHHHhhcCCEEEEcCHHHHHh
Confidence 35799998 8999999999999985 78999998 554333322110 00001111100 00 1111233455677
Q ss_pred cccEEEEeeecc
Q 026091 78 GCTGVIHVAAPI 89 (243)
Q Consensus 78 ~~d~vi~~a~~~ 89 (243)
++|++|-|.+..
T Consensus 78 ~advi~I~V~TP 89 (473)
T PLN02353 78 EADIVFVSVNTP 89 (473)
T ss_pred cCCEEEEEeCCC
Confidence 889998887643
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0034 Score=51.50 Aligned_cols=35 Identities=34% Similarity=0.521 Sum_probs=31.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+++|.|+| .|.+|+.+++.|.+.|++|.+.+| ++.
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~-~~~ 36 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDR-NPE 36 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHH
Confidence 46899999 899999999999999999999988 543
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0033 Score=52.00 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=33.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
|+ +.++|.|+| +|.+|+.++..|++.|++|++..+ +...
T Consensus 1 ~~-~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~-~~~~ 39 (311)
T PRK06130 1 MN-PIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDV-MEGA 39 (311)
T ss_pred CC-CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEEC-CHHH
Confidence 44 357899999 699999999999999999999998 4433
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0026 Score=54.76 Aligned_cols=71 Identities=21% Similarity=0.277 Sum_probs=49.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++|+|+| +|.+|..+++.|...| .+|+++.| +......+. ... +...+ +.+++.+.+.++|+|
T Consensus 179 ~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~r-s~~ra~~la--~~~-----g~~~i-----~~~~l~~~l~~aDvV 244 (417)
T TIGR01035 179 KGKKALLIG-AGEMGELVAKHLLRKGVGKILIANR-TYERAEDLA--KEL-----GGEAV-----KFEDLEEYLAEADIV 244 (417)
T ss_pred cCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHH--HHc-----CCeEe-----eHHHHHHHHhhCCEE
Confidence 457999999 5999999999999999 78999999 543322111 111 11122 234677788899999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|.+.+.
T Consensus 245 i~aT~s 250 (417)
T TIGR01035 245 ISSTGA 250 (417)
T ss_pred EECCCC
Confidence 988654
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0046 Score=51.10 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
+.++|.|.| +|.+|+++++.|.+.|++|.+..|+.
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 356899998 89999999999999999999999943
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0024 Score=53.28 Aligned_cols=99 Identities=15% Similarity=0.084 Sum_probs=61.0
Q ss_pred cccEEEEeeeccCCCC---CChH-HHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 78 GCTGVIHVAAPIDIHG---KEPE-EVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~~---~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
+++.+|.+-|..+... ..++ .--++.|+..+..+..--.+.+ .+++|.++|.....-.
T Consensus 203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~s----------------- 264 (410)
T PF08732_consen 203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAIS----------------- 264 (410)
T ss_pred hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchhh-----------------
Confidence 4567788877765422 2222 1233444444444332222566 7899999985422111
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
..++|..+|...|+-+.......=-..+|+|||.+.|....
T Consensus 265 ------~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 265 ------SMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred ------hhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 22469999999999998864322246899999999998665
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.024 Score=46.71 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=63.7
Q ss_pred eEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh--------------------hhhcCCCCCCCeEEEecC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS--------------------FLTNLPRASERLQIFNAD 65 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~D 65 (243)
+|+|+| .|.+|..+++.|+..| -++++++.+.-+ ...+. .+.++ ...-+++.+..+
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve-~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-Np~v~V~~~~~~ 77 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTID-LSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-NPNVKIVAYHAN 77 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcc-hhhcCcCccCChhHcCcHHHHHHHHHHHHH-CCCCeEEEEecc
Confidence 589999 6999999999999999 467777653221 11111 00110 123356667777
Q ss_pred CCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 66 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+.+.....++++++|+||.+. +.. ..-..+-+.|++.+ ..+|..++.+
T Consensus 78 i~~~~~~~~f~~~~DvVv~a~--------Dn~--------~ar~~in~~c~~~~--ip~I~~gt~G 125 (312)
T cd01489 78 IKDPDFNVEFFKQFDLVFNAL--------DNL--------AARRHVNKMCLAAD--VPLIESGTTG 125 (312)
T ss_pred CCCccchHHHHhcCCEEEECC--------CCH--------HHHHHHHHHHHHCC--CCEEEEecCc
Confidence 776544557788999999763 222 11234556777777 4566665544
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0035 Score=52.29 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=29.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHH-cCCe---EEEEEe
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLD-HGYS---VRTTVR 37 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~-~g~~---V~~~~r 37 (243)
|+.+..+|.|+||||++|..+++.|.+ ...+ +..+..
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 565667999999999999999999985 5566 544543
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0099 Score=52.72 Aligned_cols=100 Identities=15% Similarity=0.265 Sum_probs=67.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCC-chhhchhhhhhcCCC-CCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSD-PEQKRDLSFLTNLPR-ASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~-~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..||+|.| .|.+|++++-.|++.| .++.+++-+. ......+.++.+... .++.+.+-..|.++.+++.+++++.|.
T Consensus 129 ~akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~Di 207 (637)
T TIGR03693 129 NAKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPADW 207 (637)
T ss_pred cccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCcE
Confidence 46899999 8999999999999999 5677775422 222221223322222 256777777777889999999999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
|++.+-- +. ......+.++|.+.|
T Consensus 208 Vi~vsDd-------y~-------~~~Lr~lN~acvkeg 231 (637)
T TIGR03693 208 VLYVSDN-------GD-------IDDLHALHAFCKEEG 231 (637)
T ss_pred EEEECCC-------CC-------hHHHHHHHHHHHHcC
Confidence 9988531 11 111346667777777
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0046 Score=55.85 Aligned_cols=70 Identities=16% Similarity=0.201 Sum_probs=57.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
..|+|+| .|-+|+.+++.|.++|+++++++. +++..+... + .+...+.+|.+|++.++++ ++++|++|-
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~-d~~~v~~~~---~-----~g~~v~~GDat~~~~L~~agi~~A~~vv~ 470 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLER-DISAVNLMR---K-----YGYKVYYGDATQLELLRAAGAEKAEAIVI 470 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEEC-CHHHHHHHH---h-----CCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence 4788888 899999999999999999999998 664443332 2 2678999999999999987 567898875
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 471 ~ 471 (601)
T PRK03659 471 T 471 (601)
T ss_pred E
Confidence 5
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0031 Score=54.48 Aligned_cols=72 Identities=19% Similarity=0.267 Sum_probs=49.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++|+|+| +|.+|..+++.|...|. +|++..| ++.....+. ... +. +..+.+++.+.+.++|+|
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r-~~~ra~~la--~~~-----g~-----~~~~~~~~~~~l~~aDvV 246 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANR-TLERAEELA--EEF-----GG-----EAIPLDELPEALAEADIV 246 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeC-CHHHHHHHH--HHc-----CC-----cEeeHHHHHHHhccCCEE
Confidence 457999999 59999999999999996 7888888 553322211 111 11 222335667777889999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|.+.+..
T Consensus 247 I~aT~s~ 253 (423)
T PRK00045 247 ISSTGAP 253 (423)
T ss_pred EECCCCC
Confidence 9886543
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0047 Score=51.51 Aligned_cols=36 Identities=36% Similarity=0.408 Sum_probs=31.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
+++|.|+| +|-+|..++..|++.|++|.+..| +++.
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r-~~~~ 39 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWAR-RPEF 39 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHHH
Confidence 45899998 799999999999999999999999 5543
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.025 Score=47.90 Aligned_cols=104 Identities=15% Similarity=0.212 Sum_probs=63.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+.++|+|+| +|.+|+++++.|+..| .++++++.+ .-...++.+ +... ...-+++.+
T Consensus 40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D-~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~ 116 (370)
T PRK05600 40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDD-TVDVSNIHRQILFGASDVGRPKVEVAAERLKEI-QPDIRVNAL 116 (370)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC-EEccccccccccCChhHCCCHHHHHHHHHHHHH-CCCCeeEEe
Confidence 457899999 7999999999999999 578888773 211111111 1111 112245555
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
...++ .+.+.++++++|+||.+. +.+. .-..+-+.|.+.+ + .+|+.+.
T Consensus 117 ~~~i~-~~~~~~~~~~~DlVid~~--------Dn~~--------~r~~in~~~~~~~-i-P~v~~~~ 164 (370)
T PRK05600 117 RERLT-AENAVELLNGVDLVLDGS--------DSFA--------TKFLVADAAEITG-T-PLVWGTV 164 (370)
T ss_pred eeecC-HHHHHHHHhCCCEEEECC--------CCHH--------HHHHHHHHHHHcC-C-CEEEEEE
Confidence 55554 456778889999999773 2221 1124456677777 3 4666554
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0056 Score=52.04 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=52.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 84 (243)
||+|+| +|..|..+++++.+.|++|++++. .+..... . + .-+.+..|..|.+.+.++++ ++|.|+.
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~-~~~~~~~-~-~--------ad~~~~~~~~d~~~l~~~~~~~~id~v~~ 68 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDR-YANAPAM-Q-V--------AHRSYVINMLDGDALRAVIEREKPDYIVP 68 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeC-CCCCchh-h-h--------CceEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence 689999 699999999999999999999988 4422111 0 0 12556778889999999987 6998875
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
..
T Consensus 69 ~~ 70 (380)
T TIGR01142 69 EI 70 (380)
T ss_pred cc
Confidence 43
|
This enzyme is an alternative to PurN (TIGR00639) |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.012 Score=48.36 Aligned_cols=25 Identities=36% Similarity=0.428 Sum_probs=22.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG 29 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g 29 (243)
+++|.|.||||.+|+.+++.|.++.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~ 25 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERH 25 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcC
Confidence 4689999999999999999999875
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0035 Score=42.09 Aligned_cols=65 Identities=26% Similarity=0.337 Sum_probs=43.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcC---CeEEEE-EeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG---YSVRTT-VRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
||.|+| +|.+|.++++.|++.| ++|... .| +++....+.. +. ++..+. .+..+++++.|+|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r-~~~~~~~~~~--~~-----~~~~~~------~~~~~~~~~advv 65 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSR-SPEKAAELAK--EY-----GVQATA------DDNEEAAQEADVV 65 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEES-SHHHHHHHHH--HC-----TTEEES------EEHHHHHHHTSEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccC-cHHHHHHHHH--hh-----cccccc------CChHHhhccCCEE
Confidence 578887 8999999999999999 999966 66 6644433321 11 222222 1355666788999
Q ss_pred EEee
Q 026091 83 IHVA 86 (243)
Q Consensus 83 i~~a 86 (243)
|.+.
T Consensus 66 ilav 69 (96)
T PF03807_consen 66 ILAV 69 (96)
T ss_dssp EE-S
T ss_pred EEEE
Confidence 9774
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.025 Score=44.64 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=61.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+.++|+|.| .|.+|+++++.|+..| .++++++.+.- ...++.+ +.+. ....+++.+
T Consensus 10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V-~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i-nP~~~V~~~ 86 (231)
T cd00755 10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVV-CVSNLNRQIHALLSTVGKPKVEVMAERIRDI-NPECEVDAV 86 (231)
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEE-CchhhcchhCcChhhCCCcHHHHHHHHHHHH-CCCcEEEEe
Confidence 357899999 8999999999999999 47777765321 1111110 0110 112334444
Q ss_pred ecCCCChhhHHHHhc-cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 63 NADLNNPESFDAAIA-GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
...++ ++.+.+++. ++|+||.+. +.. ..-..+.++|++.+ ..+|...+.
T Consensus 87 ~~~i~-~~~~~~l~~~~~D~Vvdai--------D~~--------~~k~~L~~~c~~~~--ip~I~s~g~ 136 (231)
T cd00755 87 EEFLT-PDNSEDLLGGDPDFVVDAI--------DSI--------RAKVALIAYCRKRK--IPVISSMGA 136 (231)
T ss_pred eeecC-HhHHHHHhcCCCCEEEEcC--------CCH--------HHHHHHHHHHHHhC--CCEEEEeCC
Confidence 44444 345566664 689998763 111 12345778888887 356655443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0053 Score=50.05 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=45.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+|+|.|+|.+|.+|+.++..|+++|++|++..| +. . ++.+..+++|+||
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~-~t-----------------~------------~l~e~~~~ADIVI 207 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS-RS-----------------T------------DAKALCRQADIVV 207 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC-CC-----------------C------------CHHHHHhcCCEEE
Confidence 5799999999999999999999999999999877 32 0 4566777889988
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
-+.+-
T Consensus 208 savg~ 212 (301)
T PRK14194 208 AAVGR 212 (301)
T ss_pred EecCC
Confidence 77654
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0053 Score=50.79 Aligned_cols=36 Identities=33% Similarity=0.348 Sum_probs=32.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
..+++|+||+|.+|..+++.+...|.+|+++++ +++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~-~~~ 198 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR-SPE 198 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC-CHH
Confidence 468999999999999999999999999999988 543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0098 Score=49.87 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=28.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSD 39 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 39 (243)
++|.|+||||++|+++++.|.++. .++..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 379999999999999999998876 6888886534
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0051 Score=55.76 Aligned_cols=70 Identities=23% Similarity=0.340 Sum_probs=56.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
++|+|.| .|-+|+.+++.|.++|.+++++.. +++..+.+. + .+...+.+|.+|++.++++ +++++.+|-
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~-d~~~v~~~~---~-----~g~~v~~GDat~~~~L~~agi~~A~~vvv 470 (621)
T PRK03562 401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDH-DPDHIETLR---K-----FGMKVFYGDATRMDLLESAGAAKAEVLIN 470 (621)
T ss_pred CcEEEEe-cChHHHHHHHHHHhCCCCEEEEEC-CHHHHHHHH---h-----cCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence 5799999 799999999999999999999998 664443332 2 2678999999999999876 467888886
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 471 ~ 471 (621)
T PRK03562 471 A 471 (621)
T ss_pred E
Confidence 5
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0051 Score=50.50 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=31.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
++|.|+| .|.+|..+++.|++.|++|.+..| +++.
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~-~~~~ 36 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDV-NPQA 36 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcC-CHHH
Confidence 5799999 899999999999999999999999 5433
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.006 Score=50.42 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=47.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|.| .|.||+.+++.|...|++|.+.+|+.. .. ..+..+ ...+++.++++++|+|+
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~-~~-------------~~~~~~----~~~~~l~e~l~~aDvvv 195 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK-SW-------------PGVQSF----AGREELSAFLSQTRVLI 195 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC-CC-------------CCceee----cccccHHHHHhcCCEEE
Confidence 468999999 899999999999999999999988322 11 011111 13457889999999988
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 196 ~~l 198 (312)
T PRK15469 196 NLL 198 (312)
T ss_pred ECC
Confidence 664
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0046 Score=54.51 Aligned_cols=37 Identities=27% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
.++|.|+| +|.+|+.++..|+..|++|++.++ +++..
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~-~~~~~ 40 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDP-HPEAE 40 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeC-CHHHH
Confidence 46899998 899999999999999999999999 55443
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0037 Score=51.74 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=48.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++|+|.| +|.+|..+++.|.+.| .+|+++.| +++....+. ... +.. ..+.+++.+.+.++|+|
T Consensus 177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r-~~~ra~~la--~~~-----g~~-----~~~~~~~~~~l~~aDvV 242 (311)
T cd05213 177 KGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANR-TYERAEELA--KEL-----GGN-----AVPLDELLELLNEADVV 242 (311)
T ss_pred cCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHH--HHc-----CCe-----EEeHHHHHHHHhcCCEE
Confidence 467999999 5999999999998876 68888998 543322211 111 112 22334677778889999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|.+.+.
T Consensus 243 i~at~~ 248 (311)
T cd05213 243 ISATGA 248 (311)
T ss_pred EECCCC
Confidence 988653
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0049 Score=50.22 Aligned_cols=76 Identities=17% Similarity=0.070 Sum_probs=48.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++++|.| +|..|++++..|.+.|. +|+++.| +.+....+... .. ....... +...+.+...+.++|+|
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nR-t~~ka~~La~~--~~---~~~~~~~--~~~~~~~~~~~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINR-NPDKLSRLVDL--GV---QVGVITR--LEGDSGGLAIEKAAEVL 194 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeC-CHHHHHHHHHH--hh---hcCccee--ccchhhhhhcccCCCEE
Confidence 357899999 69999999999999995 7999999 55433333211 10 0101111 11223344556778999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 195 InaTp~ 200 (282)
T TIGR01809 195 VSTVPA 200 (282)
T ss_pred EECCCC
Confidence 999654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.04 Score=43.98 Aligned_cols=73 Identities=26% Similarity=0.315 Sum_probs=53.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|+|+|.|||+ =|+.+++.|.+.|+ |.+.+- .+....... ......+.+.+-+.+.+.+.++++ +++.||
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~-t~~g~~~~~------~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI 71 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVA-TSYGGELLK------PELPGLEVRVGRLGDEEGLAEFLRENGIDAVI 71 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEE-hhhhHhhhc------cccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 5899999987 58999999999998 665555 332221111 012366888888889999999996 689999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
...-
T Consensus 72 DATH 75 (249)
T PF02571_consen 72 DATH 75 (249)
T ss_pred ECCC
Confidence 8853
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0072 Score=44.72 Aligned_cols=58 Identities=21% Similarity=0.306 Sum_probs=41.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+++|+|.+..+|+.++..|.++|..|+....+. ..+++.++++|+||
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------------------~~l~~~~~~ADIVV 84 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------------------KNLQEITRRADIVV 84 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------------------SSHHHHHTTSSEEE
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------------------CcccceeeeccEEe
Confidence 579999999999999999999999999998766522 24456667889998
Q ss_pred EeeeccCC
Q 026091 84 HVAAPIDI 91 (243)
Q Consensus 84 ~~a~~~~~ 91 (243)
-.+|..+.
T Consensus 85 sa~G~~~~ 92 (160)
T PF02882_consen 85 SAVGKPNL 92 (160)
T ss_dssp E-SSSTT-
T ss_pred eeeccccc
Confidence 77775443
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0092 Score=46.10 Aligned_cols=70 Identities=19% Similarity=0.216 Sum_probs=45.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+.|+|+|+| +|-+|...++.|++.|++|+++++..... +..+.. ...+.+...++.. .-++++|.|
T Consensus 8 l~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~---l~~l~~----~~~i~~~~~~~~~-----~~l~~adlV 74 (202)
T PRK06718 8 LSNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTEN---LVKLVE----EGKIRWKQKEFEP-----SDIVDAFLV 74 (202)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHH---HHHHHh----CCCEEEEecCCCh-----hhcCCceEE
Confidence 3578999999 49999999999999999999998732211 111111 1245665543332 234677888
Q ss_pred EEe
Q 026091 83 IHV 85 (243)
Q Consensus 83 i~~ 85 (243)
|-+
T Consensus 75 iaa 77 (202)
T PRK06718 75 IAA 77 (202)
T ss_pred EEc
Confidence 754
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0061 Score=50.10 Aligned_cols=73 Identities=22% Similarity=0.274 Sum_probs=50.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEe-----cCCCChhhHHHHhccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN-----ADLNNPESFDAAIAGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~ 79 (243)
+++|.|.| +|.-|.+|+..|.+.||+|...+| +++....+..-. ...++.. .++.-..++.++++++
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r-~~~~~~~i~~~~------~N~~yLp~i~lp~~l~at~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGR-DEEIVAEINETR------ENPKYLPGILLPPNLKATTDLAEALDGA 72 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCCeeEEEec-CHHHHHHHHhcC------cCccccCCccCCcccccccCHHHHHhcC
Confidence 36899999 699999999999999999999999 665444433211 1222332 2333345777888888
Q ss_pred cEEEEe
Q 026091 80 TGVIHV 85 (243)
Q Consensus 80 d~vi~~ 85 (243)
|+|+-.
T Consensus 73 d~iv~a 78 (329)
T COG0240 73 DIIVIA 78 (329)
T ss_pred CEEEEE
Confidence 887644
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0068 Score=50.90 Aligned_cols=78 Identities=21% Similarity=0.158 Sum_probs=49.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|++.|+| .|.||+.+++.|...|.+|++..|+...... ..+. .+ ...+.-+........++.++++++|+|+
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~-~~--~~~~~~~~~~~~~~~~L~ell~~aDiVv 231 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLL-IP--NGDVDDLVDEKGGHEDIYEFAGEADIVV 231 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhc-cc--cccccccccccCcccCHHHHHhhCCEEE
Confidence 468999999 8999999999999999999999884221110 0000 00 0011111101114568889999999988
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+..
T Consensus 232 l~lP 235 (347)
T PLN02928 232 LCCT 235 (347)
T ss_pred ECCC
Confidence 7753
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0074 Score=50.11 Aligned_cols=67 Identities=16% Similarity=0.250 Sum_probs=52.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|++|.|+| .|.+|+=++.+-...|++|+++.-+......+. .-..+..+.+|.+.+.++.+++|+|-
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v-----------a~~~i~~~~dD~~al~ela~~~DViT 67 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQV-----------ADRVIVAAYDDPEALRELAAKCDVIT 67 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhc-----------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence 47899999 699999999999999999999986333222111 22566777889999999999998873
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0039 Score=50.96 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=31.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
.++|.|+| +|.+|+.++..|++.|++|++.++ +++
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~-~~~ 37 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDI-SDE 37 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeC-CHH
Confidence 46899999 699999999999999999999999 443
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0076 Score=50.32 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=32.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
..+|+|+||+|.+|..+++.+...|.+|+++++ +++..
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~-~~~~~ 189 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG-SDEKV 189 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC-CHHHH
Confidence 578999999999999999988889999998888 55433
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.031 Score=48.66 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|+...|+|+|+|+ |..|.++++.|.++|++|.+.++... .. ....+... ..++.++.+...+ ..++++|
T Consensus 1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~-~~-~~~~l~~~---~~gi~~~~g~~~~-----~~~~~~d 69 (445)
T PRK04308 1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELK-PE-RVAQIGKM---FDGLVFYTGRLKD-----ALDNGFD 69 (445)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-ch-hHHHHhhc---cCCcEEEeCCCCH-----HHHhCCC
Confidence 6666789999995 68999999999999999998887332 11 11112211 1256666554221 2346789
Q ss_pred EEEEeeeccC
Q 026091 81 GVIHVAAPID 90 (243)
Q Consensus 81 ~vi~~a~~~~ 90 (243)
.||...|+..
T Consensus 70 ~vv~spgi~~ 79 (445)
T PRK04308 70 ILALSPGISE 79 (445)
T ss_pred EEEECCCCCC
Confidence 9999888643
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.024 Score=52.02 Aligned_cols=105 Identities=17% Similarity=0.213 Sum_probs=67.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhh----hcC--------------CCCCCCeEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFL----TNL--------------PRASERLQIFN 63 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~--------------~~~~~~~~~~~ 63 (243)
+.++|+|+|+ | +|++++..|+..|- ++++++. +.-...++.+. .+. -...-+++.+.
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~-D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADF-DTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcC-CEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4579999997 8 99999999999883 7887776 32222233221 000 01233566666
Q ss_pred cCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 64 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
..++ .+.+.++++++|+||.+. |.+ ..-..+.++|.+.+ ..+|+-++.
T Consensus 183 ~~i~-~~n~~~~l~~~DlVvD~~--------D~~--------~~R~~ln~~a~~~~--iP~i~~~~~ 230 (722)
T PRK07877 183 DGLT-EDNVDAFLDGLDVVVEEC--------DSL--------DVKVLLREAARARR--IPVLMATSD 230 (722)
T ss_pred ccCC-HHHHHHHhcCCCEEEECC--------CCH--------HHHHHHHHHHHHcC--CCEEEEcCC
Confidence 6666 678999999999999773 222 11224556788888 456666653
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0089 Score=44.21 Aligned_cols=33 Identities=24% Similarity=0.181 Sum_probs=30.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
++++|+|+| .|-+|...++.|++.|++|++++.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence 578999999 699999999999999999998854
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0014 Score=50.76 Aligned_cols=81 Identities=21% Similarity=0.319 Sum_probs=58.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+++.+.||+||+|+.+|+.+...||+|.-++|+..+.... +.+-.+. ..++...+..++....++++.+..++|
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snkid~~~dv-----e~e~tlvlggnpfsgs~vlk~A~~vv~ 77 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKIDDKQDV-----EVEWTLVLGGNPFSGSEVLKNATNVVH 77 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCceEEEeccccCCCcCCCCcchhhh-----hHHHHhhhcCCCcchHHHHHHHHhhce
Confidence 4688899999999999999999999999999965432211 1111111 234555666788888888888877888
Q ss_pred eeeccCC
Q 026091 85 VAAPIDI 91 (243)
Q Consensus 85 ~a~~~~~ 91 (243)
..+....
T Consensus 78 svgilse 84 (283)
T KOG4288|consen 78 SVGILSE 84 (283)
T ss_pred eeeEeec
Confidence 8877554
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.042 Score=44.29 Aligned_cols=105 Identities=19% Similarity=0.363 Sum_probs=62.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
..++|+|.| .|.+|+++++.|+..| .++++++.+. -...++.+ +.+. .+..+++.+
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~-V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I-NP~~~V~~i 105 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDD-VCVTNTNRQIHALRDNVGLAKAEVMAERIRQI-NPECRVTVV 105 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCE-ecccccccccccChhhcChHHHHHHHHHHHhH-CCCcEEEEE
Confidence 457899999 8999999999999999 6788887632 11111110 0110 112234444
Q ss_pred ecCCCChhhHHHHhc-cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 63 NADLNNPESFDAAIA-GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
. +.-+++...+++. ++|+||.+.. .. ..-..|.++|++.+ + .+|..+++
T Consensus 106 ~-~~i~~e~~~~ll~~~~D~VIdaiD--------~~--------~~k~~L~~~c~~~~-i-p~I~~gGa 155 (268)
T PRK15116 106 D-DFITPDNVAEYMSAGFSYVIDAID--------SV--------RPKAALIAYCRRNK-I-PLVTTGGA 155 (268)
T ss_pred e-cccChhhHHHHhcCCCCEEEEcCC--------CH--------HHHHHHHHHHHHcC-C-CEEEECCc
Confidence 2 2334566667764 6899987632 11 11235778888887 4 56655554
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0052 Score=54.20 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=49.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++|+|+|+ |.+|..+++.|...|. +|++..| +......+.. .. .+... .+...+++.+.+.++|+|
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nR-s~era~~La~--~~----~g~~i---~~~~~~dl~~al~~aDVV 333 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNR-SEERVAALRE--EF----PDVEI---IYKPLDEMLACAAEADVV 333 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHH--Hh----CCCce---EeecHhhHHHHHhcCCEE
Confidence 3689999995 9999999999999996 7999999 5543322221 11 01111 122334566778899999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|.+.+.
T Consensus 334 IsAT~s 339 (519)
T PLN00203 334 FTSTSS 339 (519)
T ss_pred EEccCC
Confidence 987654
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=40.45 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=49.5
Q ss_pred CeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
|+|.|+|++ +..|..+++.|.+.|++|+.+.-+.. ... +.. -..++.+.-..+|.+
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~----~i~----------G~~-------~y~sl~e~p~~iDla 59 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGG----EIL----------GIK-------CYPSLAEIPEPIDLA 59 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCS----EET----------TEE--------BSSGGGCSST-SEE
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCce----EEC----------cEE-------eeccccCCCCCCCEE
Confidence 589999998 77899999999999999988855221 000 111 122233323457887
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+.+..+ ..+..+++.+.+.| ++.+++.++
T Consensus 60 vv~~~~-----------------~~~~~~v~~~~~~g-~~~v~~~~g 88 (116)
T PF13380_consen 60 VVCVPP-----------------DKVPEIVDEAAALG-VKAVWLQPG 88 (116)
T ss_dssp EE-S-H-----------------HHHHHHHHHHHHHT--SEEEE-TT
T ss_pred EEEcCH-----------------HHHHHHHHHHHHcC-CCEEEEEcc
Confidence 766321 11346778888889 889988887
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0082 Score=49.55 Aligned_cols=72 Identities=26% Similarity=0.307 Sum_probs=46.6
Q ss_pred CCCC-CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 1 MEEE-KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 1 m~~~-~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
|..+ .++|.|+| +|.+|..++..|.+.|+ +|++.+| ++....... .. ++.. .. .....+.++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr-~~~~~~~a~---~~-----g~~~---~~--~~~~~~~~~ 65 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADR-SAETRARAR---EL-----GLGD---RV--TTSAAEAVK 65 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEEC-CHHHHHHHH---hC-----CCCc---ee--cCCHHHHhc
Confidence 4443 47899999 89999999999999884 8998988 553332222 11 1100 01 122345667
Q ss_pred cccEEEEeee
Q 026091 78 GCTGVIHVAA 87 (243)
Q Consensus 78 ~~d~vi~~a~ 87 (243)
++|+||.+..
T Consensus 66 ~aDvViiavp 75 (307)
T PRK07502 66 GADLVILCVP 75 (307)
T ss_pred CCCEEEECCC
Confidence 8899987753
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.006 Score=49.96 Aligned_cols=63 Identities=21% Similarity=0.310 Sum_probs=43.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEee
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 86 (243)
+|.|+| .|.+|+.+++.|++.|++|++..| +++..+.+. .. +. ....+..++++++|+||-+.
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr-~~~~~~~~~---~~-----g~-------~~~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTI-GPEVADELL---AA-----GA-------VTAETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHH---HC-----CC-------cccCCHHHHHhcCCEEEEec
Confidence 478888 899999999999999999999999 543332222 11 11 11224456677788877663
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.013 Score=42.32 Aligned_cols=56 Identities=18% Similarity=0.209 Sum_probs=45.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|.|.|.+.-+|..++..|.++|.+|+.+.++.. ++++.++++|+||
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------------------~l~~~v~~ADIVv 76 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------------------QLQSKVHDADVVV 76 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------------------CHHHHHhhCCEEE
Confidence 5789999999999999999999999999988876221 3455777889998
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
-..+..
T Consensus 77 sAtg~~ 82 (140)
T cd05212 77 VGSPKP 82 (140)
T ss_pred EecCCC
Confidence 777654
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0089 Score=49.59 Aligned_cols=38 Identities=21% Similarity=0.143 Sum_probs=32.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
..+|+|+||+|.+|..+++.+...|.+|+++++ +++..
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~-s~~~~ 176 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEKV 176 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC-CHHHH
Confidence 468999999999999999988888999998888 55433
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.053 Score=42.86 Aligned_cols=104 Identities=11% Similarity=0.131 Sum_probs=61.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhh-----hcC--------------CCCCCCeEEEecCC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFL-----TNL--------------PRASERLQIFNADL 66 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~--------------~~~~~~~~~~~~D~ 66 (243)
+|+|.| .|.+|..+++.|+..|. ++++++.+.- ....+.+- .+. ....-+++.+..++
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~V-e~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i 78 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTI-DVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKV 78 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEE-cchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 589999 79999999999999994 6777766321 11111110 000 01234566777777
Q ss_pred CChhhH-HHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 67 NNPESF-DAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 67 ~d~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
.+...+ .++++++|+||.+. |.. ..-..+-+.|.+.+ ..+|..++.
T Consensus 79 ~~~~~~~~~f~~~~DvVi~a~--------Dn~--------~aR~~ln~~c~~~~--iplI~~g~~ 125 (234)
T cd01484 79 GPEQDFNDTFFEQFHIIVNAL--------DNI--------IARRYVNGMLIFLI--VPLIESGTE 125 (234)
T ss_pred ChhhhchHHHHhCCCEEEECC--------CCH--------HHHHHHHHHHHHcC--CCEEEEccc
Confidence 654433 46778999999762 222 12234556677766 356665553
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.045 Score=46.82 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=63.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhh--------------------hhcCCCCCCCeEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSF--------------------LTNLPRASERLQIF 62 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 62 (243)
+..+|+|+| +|.+|+++++.|+..|. ++++++.+ .-...++.+ +.+. ...-+++.+
T Consensus 41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D-~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~i~~~ 117 (392)
T PRK07878 41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFD-VVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI-NPLVNVRLH 117 (392)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC-EecCcccccccccChhcCCChHHHHHHHHHHHh-CCCcEEEEE
Confidence 356899999 79999999999999984 67766652 211111111 0110 112234445
Q ss_pred ecCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 63 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
...++ .+...++++++|+||.+. +.+. .-..+-++|++.+ ..+|+.+..+
T Consensus 118 ~~~i~-~~~~~~~~~~~D~Vvd~~--------d~~~--------~r~~ln~~~~~~~--~p~v~~~~~g 167 (392)
T PRK07878 118 EFRLD-PSNAVELFSQYDLILDGT--------DNFA--------TRYLVNDAAVLAG--KPYVWGSIYR 167 (392)
T ss_pred eccCC-hhHHHHHHhcCCEEEECC--------CCHH--------HHHHHHHHHHHcC--CCEEEEEecc
Confidence 55554 345677888999999663 2221 1223556777777 4577766544
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.012 Score=48.47 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=30.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
+|.|+| .|.+|+.+++.|.+.|++|.+..| +++..
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr-~~~~~ 36 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDH-DQDAV 36 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEEC-CHHHH
Confidence 699999 799999999999999999999998 55443
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0084 Score=48.82 Aligned_cols=77 Identities=19% Similarity=0.339 Sum_probs=46.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+++|.| +|+.|++++-.|++.|. ++.++.| +.+....+...-.. ...... ....+ ...+.+.+.++|+|
T Consensus 126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR-~~~ka~~La~~~~~-~~~~~~-~~~~~---~~~~~~~~~~~div 198 (283)
T PRK14027 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADL-DTSRAQALADVINN-AVGREA-VVGVD---ARGIEDVIAAADGV 198 (283)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHHhh-ccCcce-EEecC---HhHHHHHHhhcCEE
Confidence 357899999 69999999999999995 7888888 55433333211000 001111 11122 22333445678999
Q ss_pred EEeee
Q 026091 83 IHVAA 87 (243)
Q Consensus 83 i~~a~ 87 (243)
||+..
T Consensus 199 INaTp 203 (283)
T PRK14027 199 VNATP 203 (283)
T ss_pred EEcCC
Confidence 99864
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.021 Score=46.32 Aligned_cols=69 Identities=23% Similarity=0.284 Sum_probs=42.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+++|.|+| +|.+|+.+++.|.+. ++++.++..++++...... ... +. ..-.++++++++++|+|
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a--~~~-----g~------~~~~~~~eell~~~D~V 71 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFI--WGL-----RR------PPPVVPLDQLATHADIV 71 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHH--Hhc-----CC------CcccCCHHHHhcCCCEE
Confidence 46899999 899999999999873 6888766553543322111 000 10 01123445556778988
Q ss_pred EEeee
Q 026091 83 IHVAA 87 (243)
Q Consensus 83 i~~a~ 87 (243)
+-++.
T Consensus 72 vi~tp 76 (271)
T PRK13302 72 VEAAP 76 (271)
T ss_pred EECCC
Confidence 87754
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0046 Score=54.89 Aligned_cols=36 Identities=25% Similarity=0.186 Sum_probs=31.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+.|+++|+|+ |.+|++++..|++.|++|+++.| +.+
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR-~~e 413 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANR-TYE 413 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC-CHH
Confidence 3578999997 89999999999999999999988 543
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.039 Score=43.88 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=27.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEE-Ee
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTT-VR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~-~r 37 (243)
|.||.|.|++|-+|+.+++.+.+.. .++.+. .|
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~ 36 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDR 36 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEec
Confidence 5689999999999999999998875 565444 45
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0097 Score=48.02 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=30.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~ 41 (243)
|++|.|+| +|.+|+.+++.|.+.| ++|.+.+| +++
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r-~~~ 39 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDP-SPE 39 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcC-CHH
Confidence 56899999 7999999999999988 78988898 543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0078 Score=48.82 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=46.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.++++|.| +|+.+++++..|++.| .+++++.| +.+....+. .+... ...+.. .++.+.+... +.|.|
T Consensus 126 ~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NR-t~~ra~~La~~~~~~---~~~~~~--~~~~~~~~~~----~~dli 194 (283)
T COG0169 126 GKRVLILG-AGGAARAVAFALAEAGAKRITVVNR-TRERAEELADLFGEL---GAAVEA--AALADLEGLE----EADLL 194 (283)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHhhhc---cccccc--cccccccccc----ccCEE
Confidence 57899999 6999999999999999 68999999 554433332 22221 111111 2222222222 67999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 195 INaTp~ 200 (283)
T COG0169 195 INATPV 200 (283)
T ss_pred EECCCC
Confidence 998754
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.045 Score=45.27 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=48.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH---HHhc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD---AAIA--GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~ 79 (243)
+++++|+|+++.+|..+++.+...|.+|+++++ +......+. .. ... ...|..+.+..+ +... ++
T Consensus 167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~---~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAG-SEDKLERAK---EL-----GAD-YVIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH---Hc-----CCC-eEEecCChHHHHHHHHHhCCCCC
Confidence 568999999999999999999999999998888 443332222 11 111 112444443333 3332 58
Q ss_pred cEEEEeee
Q 026091 80 TGVIHVAA 87 (243)
Q Consensus 80 d~vi~~a~ 87 (243)
|.++++++
T Consensus 237 d~~i~~~g 244 (342)
T cd08266 237 DVVVEHVG 244 (342)
T ss_pred cEEEECCc
Confidence 99999876
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.014 Score=52.35 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=52.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|+|+| +|.+|.-+++++.+.|++|++++. ++.... .. -.-+.+.+|..|.+.+.++.+++|+|.
T Consensus 21 ~~k~IgIIG-gGqlg~mla~aA~~lG~~Vi~ld~-~~~apa--~~--------~AD~~~v~~~~D~~~l~~~a~~~dvIt 88 (577)
T PLN02948 21 SETVVGVLG-GGQLGRMLCQAASQMGIKVKVLDP-LEDCPA--SS--------VAARHVVGSFDDRAAVREFAKRCDVLT 88 (577)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCCch--hh--------hCceeeeCCCCCHHHHHHHHHHCCEEE
Confidence 468999999 689999999999999999999988 442111 00 012455688899999999888888774
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0083 Score=48.88 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=31.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
+++|.|+| +|.+|..++..|+..|++|+++++ +++.
T Consensus 3 ~~kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~-~~~~ 38 (282)
T PRK05808 3 IQKIGVIG-AGTMGNGIAQVCAVAGYDVVMVDI-SDAA 38 (282)
T ss_pred ccEEEEEc-cCHHHHHHHHHHHHCCCceEEEeC-CHHH
Confidence 56899999 699999999999999999999998 5443
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.024 Score=49.84 Aligned_cols=74 Identities=20% Similarity=0.101 Sum_probs=50.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+++|+|+| .|.+|..+++.|.++|++|+++.+++...... ...+.. .+++++.++-.. ...++|.|
T Consensus 15 ~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-----~gv~~~~~~~~~------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-----LGATVRLGPGPT------LPEDTDLV 82 (480)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-----cCCEEEECCCcc------ccCCCCEE
Confidence 357899999 59999999999999999999998744322211 122322 256666554222 23468999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|...|..
T Consensus 83 v~s~Gi~ 89 (480)
T PRK01438 83 VTSPGWR 89 (480)
T ss_pred EECCCcC
Confidence 9887763
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0061 Score=50.90 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=46.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|+| .|.||+.+++.|...|.+|.+.+|+.. .. .. ... ++ ...++.++++++|+|+
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~-~~---~~~-----~~--------~~~~l~ell~~aDiV~ 209 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRK-PE-AE---KEL-----GA--------EYRPLEELLRESDFVS 209 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCC-hh-hH---HHc-----CC--------EecCHHHHHhhCCEEE
Confidence 568999999 799999999999999999999888322 11 00 000 11 1235778888999987
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 210 l~l 212 (333)
T PRK13243 210 LHV 212 (333)
T ss_pred EeC
Confidence 665
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.019 Score=44.43 Aligned_cols=69 Identities=22% Similarity=0.266 Sum_probs=50.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+| .|-+|..-++.|++.|++|++++. +.. ..+..+.. ..+++++..+.... .+++++.||
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp-~~~--~~l~~l~~----~~~i~~~~~~~~~~-----dl~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAE-ELE--SELTLLAE----QGGITWLARCFDAD-----ILEGAFLVI 74 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcC-CCC--HHHHHHHH----cCCEEEEeCCCCHH-----HhCCcEEEE
Confidence 568999999 699999999999999999999987 332 12222222 23789999887632 356778877
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
-+
T Consensus 75 ~a 76 (205)
T TIGR01470 75 AA 76 (205)
T ss_pred EC
Confidence 44
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=48.26 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=44.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEE-eCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-RSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+|+|.|.|-++.+|..++..|++.|++|++.. | +. .+.++++++|+|
T Consensus 157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r-T~------------------------------~l~e~~~~ADIV 205 (296)
T PRK14188 157 SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR-TR------------------------------DLPAVCRRADIL 205 (296)
T ss_pred CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC-CC------------------------------CHHHHHhcCCEE
Confidence 579999999999999999999999999999884 5 32 146677788999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|-+.+-
T Consensus 206 Isavg~ 211 (296)
T PRK14188 206 VAAVGR 211 (296)
T ss_pred EEecCC
Confidence 877654
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.04 Score=43.89 Aligned_cols=37 Identities=27% Similarity=0.241 Sum_probs=31.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
...+|+|+|+++ +|..+++.+...|.+|+++++ ++..
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~-~~~~ 170 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDR-SDEK 170 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcC-CHHH
Confidence 356899999999 999999999889999999988 5433
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=49.75 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=29.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (243)
.++|.|+|.+|.+|..+++.|.+. +++|++.+|
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~ 37 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDP 37 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcC
Confidence 479999999999999999999875 788888877
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.028 Score=48.01 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=28.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
+|.|.| +|++|..++..|+ .||+|+++.+ +++..
T Consensus 2 kI~VIG-lGyvGl~~A~~lA-~G~~VigvD~-d~~kv 35 (388)
T PRK15057 2 KITISG-TGYVGLSNGLLIA-QNHEVVALDI-LPSRV 35 (388)
T ss_pred EEEEEC-CCHHHHHHHHHHH-hCCcEEEEEC-CHHHH
Confidence 689998 8999999997666 5999999999 55443
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0039 Score=50.98 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=31.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
++|.|+| .|.+|+.++..|++.|++|++.++ +++..
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~-~~~~~ 37 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDI-KQEQL 37 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeC-CHHHH
Confidence 5899999 599999999999999999999999 55433
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.013 Score=48.05 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=28.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
+|+|.| +|.+|+.++..|.+.|++|+++.|+
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 699999 6999999999999999999999993
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0079 Score=45.02 Aligned_cols=77 Identities=25% Similarity=0.213 Sum_probs=48.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC-----------------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL----------------- 66 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~----------------- 66 (243)
.+.+|+|+| +|.+|...++.|...|++|+.+.. .+......... ....+..+.
T Consensus 19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~-~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T PF01262_consen 19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDE-RPERLRQLESL--------GAYFIEVDYEDHLERKDFDKADYYEH 88 (168)
T ss_dssp -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEES-SHHHHHHHHHT--------TTEESEETTTTTTTSB-CCHHHCHHH
T ss_pred CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccC-CHHHHHhhhcc--------cCceEEEcccccccccccchhhhhHH
Confidence 357899999 899999999999999999999998 55433333221 223333321
Q ss_pred --CChhhHHHHhccccEEEEeeeccC
Q 026091 67 --NNPESFDAAIAGCTGVIHVAAPID 90 (243)
Q Consensus 67 --~d~~~~~~~~~~~d~vi~~a~~~~ 90 (243)
.....+.+.++..|.||.++-...
T Consensus 89 ~~~~~~~f~~~i~~~d~vI~~~~~~~ 114 (168)
T PF01262_consen 89 PESYESNFAEFIAPADIVIGNGLYWG 114 (168)
T ss_dssp CCHHHHHHHHHHHH-SEEEEHHHBTT
T ss_pred HHHhHHHHHHHHhhCcEEeeecccCC
Confidence 112455666667899997765433
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=43.40 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=44.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+++|+| =|.+|+.++++|...|.+|++..+ +|-..-+.. .++.+. ..+.++++..|++|
T Consensus 22 ~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~-DPi~alqA~--------~dGf~v--------~~~~~a~~~adi~v 83 (162)
T PF00670_consen 22 AGKRVVVIG-YGKVGKGIARALRGLGARVTVTEI-DPIRALQAA--------MDGFEV--------MTLEEALRDADIFV 83 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-S-SHHHHHHHH--------HTT-EE--------E-HHHHTTT-SEEE
T ss_pred CCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEEC-ChHHHHHhh--------hcCcEe--------cCHHHHHhhCCEEE
Confidence 468999999 799999999999999999999998 553221111 224432 24677888899999
Q ss_pred EeeeccC
Q 026091 84 HVAAPID 90 (243)
Q Consensus 84 ~~a~~~~ 90 (243)
.+.|..+
T Consensus 84 taTG~~~ 90 (162)
T PF00670_consen 84 TATGNKD 90 (162)
T ss_dssp E-SSSSS
T ss_pred ECCCCcc
Confidence 8876544
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 243 | ||||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 9e-77 | ||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 3e-55 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 1e-39 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 1e-12 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 8e-12 | ||
| 2gn4_A | 344 | Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd | 1e-04 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 2e-04 | ||
| 3rft_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 2e-04 | ||
| 3rfx_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 2e-04 | ||
| 4f6l_B | 508 | Crystal Structure Of Aureusimine Biosynthetic Clust | 3e-04 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 5e-04 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 5e-04 |
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
| >pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267 | Back alignment and structure |
|
| >pdb|3RFX|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens, Y136a Mutant Complexed With Nad Length = 267 | Back alignment and structure |
|
| >pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-126
Identities = 139/237 (58%), Positives = 184/237 (77%), Gaps = 1/237 (0%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
KGRVCVTGGTGF+GSW+I LL++GYSV TT+R+DPE+KRD+SFLTNLP ASE+L FNA
Sbjct: 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
DL+NP+SF AAI GC G+ H A+PID EPEE++ +R V G +GILK+C+ S TVKR
Sbjct: 61 DLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRF 120
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
+YTSS S V F+GKD D+LDE+ WSDVD +R + +G +Y +SKTLAE+A LEF E++G+
Sbjct: 121 IYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180
Query: 185 DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241
D+VT+I F+ G F+CP+L S+ L +V+G +E+ + MVH+DDVARAHI+
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIY 236
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 352 bits (905), Expect = e-123
Identities = 109/241 (45%), Positives = 158/241 (65%), Gaps = 1/241 (0%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M + VCVTG +GFIGSWL+MRLL+ GY+VR TVR DP + + L +LP+A L
Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLT 59
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
++ ADL + SFD AI GCTGV HVA P+D K+PE +I+ + G +GI+KSC + T
Sbjct: 60 LWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT 119
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V+R+V+TSSA TV+ + + DE+ WSD+++ R + Y +SKTLAE+AA ++A+
Sbjct: 120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E+ +D +TIIP+ V GPFI + S+ L+ + GN YS++ VH+DD+ AHI
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 241 F 241
+
Sbjct: 240 Y 240
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-113
Identities = 94/249 (37%), Positives = 150/249 (60%), Gaps = 11/249 (4%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
K CV GGTGF+ S L+ LL GY+V TTVR DP+ ++ +S L L + L+I
Sbjct: 6 PIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQELGD-LKI 63
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
F ADL + SF+A IAGC V HVA P+ ++PE +I+ A+ G + ++K+C ++ +V
Sbjct: 64 FRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSV 123
Query: 122 KRVVYTSSASTVHFSGKDVD--MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
KRV+ TSSA+ V + D ++DE W+D++++ Y SKTLAE+AA +FA
Sbjct: 124 KRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFA 183
Query: 180 EEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML-------LNISMVHI 232
EE+ +DL+T+IP+ + G + + S+ ++++ GN + + ++S+ H+
Sbjct: 184 EENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHV 243
Query: 233 DDVARAHIF 241
+DV RAHIF
Sbjct: 244 EDVCRAHIF 252
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 273 bits (701), Expect = 3e-92
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 17/252 (6%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
E V VTG GF+ S ++ +LL+HGY VR T RS + +L +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-ASKLANLQKRWDAKYPGRFETAVV 68
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
D+ ++D I G GV H+A+ + + ++ A+ GT+ L++ + +VKR
Sbjct: 69 EDMLKQGAYDEVIKGAAGVAHIASVVSF--SNKYDEVVTPAIGGTLNALRAAAATPSVKR 126
Query: 124 VVYTSSASTVHFSGKDVD--MLDETFWSDVDYIRKLDIWGKS-------YKLSKTLAERA 174
V TSS + +V+ LDE W+ + + Y SKT AE A
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 175 ALEFAEEHG--LDLVTIIPSFVTGPFICP--QLAGSVRGTLAMVMGNREEY-SMLLNISM 229
A +F +E+ L ++P++ G P Q + +++ G +++
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246
Query: 230 VHIDDVARAHIF 241
V D+ H+
Sbjct: 247 VSAVDIGLLHLG 258
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 189 bits (481), Expect = 6e-59
Identities = 48/239 (20%), Positives = 83/239 (34%), Gaps = 31/239 (12%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+ V G TG +G + G+ + R Q + L++L + A++
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHR-PSSQIQRLAYL--------EPECRVAEM 65
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ + A+ G GVI A + +E + A+ T +CL++ V R++Y
Sbjct: 66 LDHAGLERALRGLDGVIFSAGYYPSRPRRWQE-EVASALGQTNPFYAACLQAR-VPRILY 123
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SA + E + D L SY L K + A E A GL +
Sbjct: 124 VGSAYAM-PRHPQGLPGHEGLFYD-----SLPSGKSSYVLCKWALDEQAREQARN-GLPV 176
Query: 187 VTIIPSFVTGPFICPQLAGSV-----RGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
V IP V G G V G + + + +++ + R +
Sbjct: 177 VIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQ--------RNVIDAAEAGRGLL 227
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 1e-55
Identities = 49/241 (20%), Positives = 87/241 (36%), Gaps = 38/241 (15%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
ME+ K ++ + G +GF+GS L+ L+ G+ V VR PE + +E L+
Sbjct: 1 MEKVK-KIVLIGASGFVGSALLNEALNRGFEVTAVVR-HPE---------KIKIENEHLK 49
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
+ AD+++ + G VI P P+ I + + I+ K+G
Sbjct: 50 VKKADVSSLDEVCEVCKGADAVISAFNPG---WNNPD--IYDETIKVYLTIIDGVKKAG- 103
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V R + A ++ + M ++ K L E +
Sbjct: 104 VNRFLMVGGAGSLFIAPGLRLMDSGEVPENI------------LPGVKALGEFYLNFLMK 151
Query: 181 EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
E +D V P+ P G G +G + ++ S + ++D A A I
Sbjct: 152 EKEIDWVFFSPAADMRP-------GVRTGR--YRLGKDDMIVDIVGNSHISVEDYAAAMI 202
Query: 241 F 241
Sbjct: 203 D 203
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 7e-27
Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 26/191 (13%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ VTG G +G + RL +R S L A + DL
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLS------------PLDPAGPNEECVQCDL 52
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ + +A +AGC G++H+ I ++P E I+Q + G + ++ G R+V+
Sbjct: 53 ADANAVNAMVAGCDGIVHLGG---ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVF 108
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SS T+ + + + L + D Y +SK E A + ++ G +
Sbjct: 109 ASSNHTIGYYPQT-ERLGPDVPARPDG---------LYGVSKCFGENLARMYFDKFGQET 158
Query: 187 VTIIPSFVTGP 197
+ T
Sbjct: 159 ALVRIGSCTPE 169
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-26
Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 26/191 (13%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ VTG G +GS + L + VR + D A +I DL
Sbjct: 4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL------------GAAEAHEEIVACDL 51
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ ++ + C G+IH+ + + P I+Q + G + ++ G R+V+
Sbjct: 52 ADAQAVHDLVKDCDGIIHLGG---VSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVF 107
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SS T+ + + +D D Y LSK E A + + ++
Sbjct: 108 ASSNHTIGYYPRTT-RIDTEVPRRPDS---------LYGLSKCFGEDLASLYYHKFDIET 157
Query: 187 VTIIPSFVTGP 197
+ I
Sbjct: 158 LNIRIGSCFPK 168
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 87.0 bits (215), Expect = 4e-21
Identities = 28/234 (11%), Positives = 71/234 (30%), Gaps = 40/234 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ + G TG GS ++ + G+ V VR + + + + + + I D+
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGK---------ITQTHKDINILQKDI 51
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ + ++ V+ ++ V+ ++ + R++
Sbjct: 52 FDLTL--SDLSDQNVVVDAYGISPDEA--------EKHVTSLDHLISVLNGTV-SPRLLV 100
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
A+++ +L+ + Y A++ + +
Sbjct: 101 VGGAASLQIDEDGNTLLESKGLREAPYYPTARAQ----------AKQLEHLKSHQAEFSW 150
Query: 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
I PS + P T +G S + ++D A A +
Sbjct: 151 TYISPSAMFEPG---------ERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVL 195
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 9e-21
Identities = 45/257 (17%), Positives = 80/257 (31%), Gaps = 46/257 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS-DPEQKRDLS--FLTNLPRASERLQIFN 63
V V GG GF+GS L+ RLL+ G + V D +L N+P ++
Sbjct: 34 NVMVVGGAGFVGSNLVKRLLELGVN---QVHVVD-----NLLSAEKINVP-DHPAVRFSE 84
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTV 121
+ + + V H+A +P + T+ + + +
Sbjct: 85 TSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLAD-HENNTLTTLKLYERLKHFKRL 143
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAALEFAE 180
K+VVY+++ ++ D V S Y +SK E ++ + +
Sbjct: 144 KKVVYSAAGCSI-AEKTFDDAKATEETDIVSLHNND-----SPYSMSKIFGEFYSVYYHK 197
Query: 181 EHGLDLVTIIPSFVTGPFICPQLA---GSVRGTLAMVMGNREEYSMLLNI---------- 227
+H L V V GP G+ V +
Sbjct: 198 QHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPT-----FIYKALKGMPLPLEN 252
Query: 228 ------SMVHIDDVARA 238
+ ++DVA
Sbjct: 253 GGVATRDFIFVEDVANG 269
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 8e-20
Identities = 44/234 (18%), Positives = 79/234 (33%), Gaps = 57/234 (24%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ + G TG +G L+ L Y + R EQ ++ + D+
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQY----------NNVKAVHFDV 50
Query: 67 N-NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ PE + G +I+V+ GK +V + G + ++++ K+ VKR +
Sbjct: 51 DWTPEEMAKQLHGMDAIINVSG---SGGKSLLKVDLY----GAVKLMQAAEKAE-VKRFI 102
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
S+ K + + K Y ++K A+ +E LD
Sbjct: 103 LLSTIF-SLQPEKWIGAGFDAL--------------KDYYIAKHFADLYLT---KETNLD 144
Query: 186 LVTII-PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
TII P +T T + + + S I DVA
Sbjct: 145 -YTIIQPGALTEE----------EATGLIDINDEVSAS-------NTIGDVADT 180
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-19
Identities = 44/244 (18%), Positives = 93/244 (38%), Gaps = 38/244 (15%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+ VTG +G IG+ L+ L + SD + R + ++ D++
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIA-SD-----------IVQRDTGGIKFITLDVS 49
Query: 68 NPESFDAAIA--GCTGVIHVAAPIDIHG-KEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
N + D A+ + H+A + G K+P + ++GT IL++ + V++V
Sbjct: 50 NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALA-YKVNMNGTYNILEAAKQHR-VEKV 107
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
V S+ V + + + + + ++K AE + E+ GL
Sbjct: 108 VIPSTIG-VFGPETPKNKVPSITITRPRTM---------FGVTKIAAELLGQYYYEKFGL 157
Query: 185 DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG----NREEYSMLLNIS----MVHIDDVA 236
D+ ++ + + A+ + RE+Y L + M+++ D
Sbjct: 158 DVRSLRYPGIISY---KAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL 214
Query: 237 RAHI 240
+A +
Sbjct: 215 KALV 218
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 5e-19
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 16/124 (12%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ + G TG G + + + GY V VR D + + D+
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSE--------GPRPAHVVVGDV 55
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
D +AG VI + + P V+ + G I+ + G V +VV
Sbjct: 56 LQAADVDKTVAGQDAVIVLLGTRN--DLSPTTVMSE----GARNIVAAMKAHG-VDKVVA 108
Query: 127 TSSA 130
+SA
Sbjct: 109 CTSA 112
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 2e-18
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 14/140 (10%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVR------TTVRSDPEQKRDLSFLTNLPR 54
+ + +TG GFIGS L+ LL V T + + ++ R L
Sbjct: 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 82
Query: 55 ASERLQIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGIL 112
+ D+ N + + A AG V+H AA + +P + G + +L
Sbjct: 83 F----KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITS-NATNIDGFLNML 137
Query: 113 KSCLKSGTVKRVVYTSSAST 132
+ + V+ Y +S+ST
Sbjct: 138 IAARDAK-VQSFTYAASSST 156
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 6e-18
Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV----RSDPEQ-----------KRDLSF 48
E V +TG TGF+G +L++ LL V + R++ ++ D
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDARRRLEKTFDSGDPEL 130
Query: 49 LTNL-PRASERLQIFNADLNNP------ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVII 101
L + A++RL++ D + P + ++ AA ++ P +
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELF 187
Query: 102 QRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161
V+GT +++ L + +K Y S+A D W
Sbjct: 188 GPNVAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWA 246
Query: 162 KSYKLSKTLAERAALEFAEEHGLDLVTII-PSFVTGP-----------FICPQLAGSVR- 208
Y SK E E + L V + + ++ + +
Sbjct: 247 GGYGTSKWAGEVLLREANDLCALP-VAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT 305
Query: 209 GTL--AMVMGNREEYSMLLNISMVHIDDVARA 238
G + + E + + + VA A
Sbjct: 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEA 337
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 2e-17
Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
+V +TG G IGS + LL+ G V D + + +L L
Sbjct: 23 KVFITGICGQIGSHIAELLLERGDKVVGI---D-----NFATGRREHLK-DHPNLTFVEG 73
Query: 65 DLNNPESFDAAIAGC--TGVIHVAAPIDIHGKEPEEVIIQRA--VSGTIGILKSCLKSGT 120
+ + + I V+H AA +P++ G ++++ K+
Sbjct: 74 SIADHALVNQLIGDLQPDAVVHTAASYK----DPDDWYNDTLTNCVGGSNVVQAAKKNN- 128
Query: 121 VKRVVYTSSAST 132
V R VY +A
Sbjct: 129 VGRFVYFQTALC 140
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-17
Identities = 49/233 (21%), Positives = 78/233 (33%), Gaps = 53/233 (22%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
RV V G G + +L+ L + G+ VR + EQ +L R I A+L
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPEL-------RERGASDIVVANL 74
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
E F A A V+ A + I + G I ++ K G +KR +
Sbjct: 75 --EEDFSHAFASIDAVVFAAG---SGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIM 128
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SS TV ++M + Y ++K LA+ + LD
Sbjct: 129 VSSVGTVDPDQGPMNM-------------------RHYLVAKRLADDE----LKRSSLD- 164
Query: 187 VTII-PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
TI+ P ++ G + + E + DVA+
Sbjct: 165 YTIVRPGPLSN--------EESTGKVTVSPHFSEIT------RSITRHDVAKV 203
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 2e-17
Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 47/248 (18%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
+ VTGG GFIGS ++ +L + + D +LS + E ++ A
Sbjct: 3 LIVVTGGAGFIGSHVVDKLSE-SNEIVVI---D-----NLSSGNEEFVN---EAARLVKA 50
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
DL + + G V H+AA D+ + P+E+ + V T +L++ K+G V
Sbjct: 51 DLAADD-IKDYLKGAEEVWHIAANPDVRIGAENPDEI-YRNNVLATYRLLEAMRKAG-VS 107
Query: 123 RVVYTSSASTVHFSGKDVDM-LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
R+V+TS+++ G+ + E + + + Y SK E +
Sbjct: 108 RIVFTSTSTVY---GEAKVIPTPEDYPTHPISL---------YGASKLACEALIESYCHT 155
Query: 182 HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI--------SMVHID 233
+ + V G G + + + N EE L I S ++I
Sbjct: 156 FDMQAWIYRFANVIGR---RSTHGVIYDFIMKLKRNPEE----LEILGNGEQNKSYIYIS 208
Query: 234 DVARAHIF 241
D A +F
Sbjct: 209 DCVDAMLF 216
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 3e-17
Identities = 35/254 (13%), Positives = 69/254 (27%), Gaps = 66/254 (25%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLD--HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF 62
V VTG +G G + +L + + + VR + K + +F
Sbjct: 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKI---------GGEADVF 53
Query: 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVS--------------GT 108
D+ + +S + A G ++ + + + + R G
Sbjct: 54 IGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 113
Query: 109 IGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSK 168
+ + +G VK +V S + D
Sbjct: 114 KNQIDAAKVAG-VKHIVVVGSMGGTNP----------------------DHPLNKLGNGN 150
Query: 169 TLAERAALEFAEEH----GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224
L + AE++ G I + G +++G +E +
Sbjct: 151 ILVWKRK---AEQYLADSGTPYTIIRAGGLLDKEG---------GVRELLVGKDDEL-LQ 197
Query: 225 LNISMVHIDDVARA 238
+ V DVA
Sbjct: 198 TDTKTVPRADVAEV 211
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 4e-17
Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 28/193 (14%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
E ++ +TG GFI S + RL G+ V + D ++ +
Sbjct: 25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIAS---------DWKKNEHMTEDMFCDE 75
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGILKSCLK 117
DL E+ G V ++AA + I+ + ++++
Sbjct: 76 FHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSV-IMYNNTMISFNMIEAARI 134
Query: 118 SGTVKRVVYTSSA-----STVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAE 172
+G +KR Y SSA + SD D ++ L K E
Sbjct: 135 NG-IKRFFYASSACIYPEFKQL----ETT-NVSLKESDAWPAEPQD----AFGLEKLATE 184
Query: 173 RAALEFAEEHGLD 185
+ ++ G++
Sbjct: 185 ELCKHYNKDFGIE 197
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 6e-17
Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVR------TTVRSDPEQKRDLSFLTNLPR 54
+ +TG GFIGS L+ +LL V T + + ++ + L
Sbjct: 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS- 79
Query: 55 ASERLQIFNADLNNPESFDAAIAGCTGVIHVAA----PIDIHGKEPEEVIIQRAVSGTIG 110
R D+ + + + + G V+H AA P I +P ++G +
Sbjct: 80 ---RFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSI--VDPITT-NATNITGFLN 133
Query: 111 ILKSCLKSGTVKRVVYTSSAST 132
IL + + V+ Y +S+ST
Sbjct: 134 ILHAAKNAQ-VQSFTYAASSST 154
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 1e-16
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 38/196 (19%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNL--PRASERLQIFNA 64
++ VTGGTGF+G +++ + + G + LT +A + +
Sbjct: 4 KIAVTGGTGFLGQYVVESIKNDGNTPII--------------LTRSIGNKAINDYEYRVS 49
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
D + + + V+H+AA G E + I T + +C ++ +
Sbjct: 50 DYTLEDLIN-QLNDVDAVVHLAATRGSQGKISEFHDNEI-----LTQNLYDACYENN-IS 102
Query: 123 RVVYTSSASTVHFSGKDVDM-LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
+VY S+ S + + +E D + Y +SK E ++ +
Sbjct: 103 NIVYASTISAY---SDETSLPWNEKELPLPDLM---------YGVSKLACEHIGNIYSRK 150
Query: 182 HGLDLVTIIPSFVTGP 197
GL + + + + G
Sbjct: 151 KGLCIKNLRFAHLYGF 166
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 2e-16
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
R+ VTGG GFIGS L+ +L++ GY V D +LS + ++
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVV---D-----NLSSGRREFVN---PSAELHVR 50
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
DL + A V H AA ++ EP V T +L+ ++G V+
Sbjct: 51 DLKDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVH-FNENVVATFNVLEWARQTG-VR 106
Query: 123 RVVYTSSAST 132
VV+ SS++
Sbjct: 107 TVVFASSSTV 116
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 3e-16
Identities = 38/190 (20%), Positives = 56/190 (29%), Gaps = 35/190 (18%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
R+ +TGG GFIG L L+ G V D E F +
Sbjct: 9 RILITGGAGFIGGHLARALVASGEEVTVL---D-------DLRVPPMIPPEGTGKF-LEK 57
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
E + ++ V H+A+ + K+P + + V +L C G V +V
Sbjct: 58 PVLELEERDLSDVRLVYHLASHKSVPRSFKQPLDYL--DNVDSGRHLLALCTSVG-VPKV 114
Query: 125 VYTSSAS---TVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAALEFAE 180
V S+ D +S Y SK E A
Sbjct: 115 VVGSTCEVYGQADTLPTPEDSPLS---------------PRSPYAASKVGLEMVAGAHQR 159
Query: 181 EHGLDLVTII 190
V I+
Sbjct: 160 ASVAPEVGIV 169
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 5e-16
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 45/253 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
RV VTGG GFIGS ++ LL G V D +L+ N+P + + F
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVL---D-----NLATGKRENVP---KGVPFFRV 50
Query: 65 DLNNPESFDAAIAGC--TGVIHVAAPIDIHGKEPEEVI-----IQRAVSGTIGILKSCLK 117
DL + E + A T V H AA + V + + G + +L++C +
Sbjct: 51 DLRDKEGVERAFREFRPTHVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ 106
Query: 118 SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS-YKLSKTLAERAAL 176
G V+++V+ S+ ++ + + +ET R S Y SK E
Sbjct: 107 YG-VEKLVFASTGGAIYGEVPEGERAEET-----WPPRPK-----SPYAASKAAFEHYLS 155
Query: 177 EFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM------- 229
+ + +GL V++ V GP P V A + ++ +
Sbjct: 156 VYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVR 215
Query: 230 --VHIDDVARAHI 240
V++ DVA AH
Sbjct: 216 DYVYVGDVAEAHA 228
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 9e-16
Identities = 34/232 (14%), Positives = 63/232 (27%), Gaps = 38/232 (16%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ V G TG GS ++ G+ V VR DP++ D +
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKAADR----------LGATVATLVK 50
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+A + V+ + G+ + L S L++ V
Sbjct: 51 EPLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATH-------LVSLLRNSDTLAVFI 103
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
SAS +LD + + ++
Sbjct: 104 LGSASLAMPGADHPMILDFP----------ESAASQPWYDGALYQYYEYQFLQMNANVNW 153
Query: 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ I PS V G +++G + S + ++A A
Sbjct: 154 IGISPSEAFPS---GPATSYVAGKDTLLVGEDGQ-------SHITTGNMALA 195
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-15
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPR--ASERLQIFNA 64
RV + G GFIG+ L RLL + + D+ + R
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGL--------DI-GSDAISRFLNHPHFHFVEG 52
Query: 65 DLNNP-ESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
D++ E + + C V+ + A PI+ + P V + + I++ C+K
Sbjct: 53 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYT-RNPLRV-FELDFEENLRIIRYCVKYR- 109
Query: 121 VKRVVYTSSASTVHFSGK-DVDMLDETFWSDV----DYIRKLDIWGKSYKLSKTLAERAA 175
KR+++ S+ S V+ G DE + + + R W Y +SK L +R
Sbjct: 110 -KRIIFPST-SEVY--GMCSDKYFDEDHSNLIVGPVNKPR----W--IYSVSKQLLDRVI 159
Query: 176 LEFAEEHGLDLVTIIPSFVT-GP 197
+ E+ GL T+ F GP
Sbjct: 160 WAYGEKEGLQ-FTLFRPFNWMGP 181
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 3e-15
Identities = 36/248 (14%), Positives = 77/248 (31%), Gaps = 54/248 (21%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERL 59
M ++K V V GGTG G + LL+ G + VR R +P +K +
Sbjct: 2 MVDKK-LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKAAKEL------RLQGA 53
Query: 60 QIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119
++ D ++ + A+ G V + +E E V + + G
Sbjct: 54 EVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQE-------VKQGKLLADLARRLG 106
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
+ VVY+ + + ++ K E E+
Sbjct: 107 -LHYVVYSGLENIKKLTA--------------------GRLAAAHFDGKGEVE----EYF 141
Query: 180 EEHGLDLVTIIPSF----VTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDV 235
+ G+ + ++ + F+ + L++ G+ + + + D+
Sbjct: 142 RDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVP-------MDGMSVSDL 194
Query: 236 AR--AHIF 241
+
Sbjct: 195 GPVVLSLL 202
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-15
Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 28/189 (14%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR-----SDPEQKRDLSFLTNLPRASER 58
E + VTGG GFIGS ++ L D G T + D + NL +
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTKFV------NLVDLNIA 95
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
+ D + H A + + ++ + +L CL+
Sbjct: 96 DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY-MMDNNYQYSKELLHYCLER 154
Query: 119 GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEF 178
+Y SSA+T G E +Y + L++ + SK L + +
Sbjct: 155 E--IPFLYASSAATY---GGRTSDFIE----SREYEKPLNV----FGYSKFLFDEYVRQI 201
Query: 179 AEEHGLDLV 187
E +V
Sbjct: 202 LPEANSQIV 210
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 7e-15
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS--FLTNLPRASERLQIFNA 64
R+ +TGG G +GS LI L G+ + + D + + LP L +
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQGHEI---LVID-----NFATGKREVLPPV-AGLSVIEG 72
Query: 65 DLNNPESFDAAIAGC--TGVIHVAAPIDIHGKEPEEVI--IQRAVSGTIGILKSCLKSGT 120
+ + + A T V+H AA K+P++ V G+I + K+ K+G
Sbjct: 73 SVTDAGLLERAFDSFKPTHVVHSAA----AYKDPDDWAEDAATNVQGSINVAKAASKAG- 127
Query: 121 VKRVVYTSSAST 132
VKR++ +A
Sbjct: 128 VKRLLNFQTALC 139
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 7e-15
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 36/208 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF--LTNLPRASERLQIFNA 64
+V + G GFIG L R+L+ V D+ L +L ER+ F
Sbjct: 26 KVLILGVNGFIGHHLSKRILETTDWE---VFGM-----DMQTDRLGDL-VKHERMHFFEG 76
Query: 65 DL-NNPESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
D+ N E + + C ++ + A P K+P V + + I++S +K G
Sbjct: 77 DITINKEWVEYHVKKCDVILPLVAIATPATYV-KQPLRV-FELDFEANLPIVRSAVKYG- 133
Query: 121 VKRVVYTSSASTVHFSGKDVDML-----DETFWSDVDYIRKLDIWGKSYKLSKTLAERAA 175
K +V+ S+ S V+ G D + ++ R W Y SK L +R
Sbjct: 134 -KHLVFPST-SEVY--GMCADEQFDPDASALTYGPINKPR----W--IYACSKQLMDRVI 183
Query: 176 LEFAEEHGLDLVTIIPSFVT-GPFICPQ 202
+ GL+ T+ F GP +
Sbjct: 184 WGYG-MEGLN-FTLFRPFNWIGPGLDSI 209
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 8e-15
Identities = 35/234 (14%), Positives = 61/234 (26%), Gaps = 57/234 (24%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
V + G G I +I +L D R P + QI D
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKP--------YPTNSQIIMGD 75
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ N + A+ G V + ++ + VKR++
Sbjct: 76 VLNHAALKQAMQGQDIVYANLTG-------------EDLDIQANSVIAAMKACD-VKRLI 121
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
+ S + K W + R A + E GL+
Sbjct: 122 FVLSLGI-----------------YDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLE 164
Query: 186 LVTII-PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
TI+ P+++T + E + ++V VA
Sbjct: 165 -YTILRPAWLTDE----------DIIDYELTSRNEPFKG----TIVSRKSVAAL 203
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 1e-14
Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 27/197 (13%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYS-----VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
+ G TG IG+ L L V R +
Sbjct: 6 IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA----------WHEDNPINYVQC 55
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKR 123
D+++P+ A ++ T V HV + +E + +L + + + +K
Sbjct: 56 DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQE-NCEANSKMFRNVLDAVIPNCPNLKH 114
Query: 124 VVYTSSAS--TVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE-FAE 180
+ + F + +++ D+ Y E LE +
Sbjct: 115 ISLQTGRKHYMGPFESYGKIESHDPPYTE-------DLPRLKYMNFYYDLEDIMLEEVEK 167
Query: 181 EHGLDLVTIIPSFVTGP 197
+ GL P + G
Sbjct: 168 KEGLTWSVHRPGNIFGF 184
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 2e-14
Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 27/148 (18%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
M ++K + V G TG G+ LI G+ VR V + L +P
Sbjct: 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLIAEE-LQAIPNV----T 54
Query: 61 IFNADL-NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119
+F L NN D G +E+ I + + + ++G
Sbjct: 55 LFQGPLLNNVPLMDTLFEGAHLAFINTTSQ-----AGDEIAIGKD------LADAAKRAG 103
Query: 120 TVKRVVYTSSASTV---------HFSGK 138
T++ +Y+S ++ K
Sbjct: 104 TIQHYIYSSMPDHSLYGPWPAVPMWAPK 131
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 2e-14
Identities = 39/234 (16%), Positives = 68/234 (29%), Gaps = 52/234 (22%)
Query: 13 GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESF 72
G G +G L RL G+ V RS + +Q AD+ P++
Sbjct: 10 GCGDLGLELARRLTAQGHEVTGLRRS-AQ------------PMPAGVQTLIADVTRPDTL 56
Query: 73 DAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAST 132
+ + ++ + E + + + S L+ ++ V + SS
Sbjct: 57 ASIVHLRPEILVYCVAASEYSDEH----YRLSYVEGLRNTLSALEGAPLQHVFFVSSTG- 111
Query: 133 VHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTII-- 190
V+ + + LDE K + E AE + I
Sbjct: 112 VYGQEVE-EWLDEDTPPIAKDFS-----------GKRMLE------AEALLAAYSSTILR 153
Query: 191 PSFVTGP---FICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241
S + GP + Q + NR +H DD A +
Sbjct: 154 FSGIYGPGRLRMIRQAQTPEQWPARNAWTNR-----------IHRDDGAAFIAY 196
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-14
Identities = 38/188 (20%), Positives = 64/188 (34%), Gaps = 34/188 (18%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR-----SDPEQKRDLSFLTNLPRASERLQIF 62
+ VTGG GFIGS ++ L D G T + D + NL + +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTKFV------NLVDLNIADYMD 52
Query: 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEV---IIQRAVSGTIGILKSCLKSG 119
D + H A E ++ + +L CL+
Sbjct: 53 KEDFLIQIMAGEEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLERE 108
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
+Y SSA+T + G+ D ++ +Y + L++ Y SK L + +
Sbjct: 109 I--PFLYASSAAT--YGGRTSDFIESR-----EYEKPLNV----YGYSKFLFDEYVRQIL 155
Query: 180 EEHGLDLV 187
E +V
Sbjct: 156 PEANSQIV 163
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 6e-14
Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 60/237 (25%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD- 65
+ +TG GF+G L L IF
Sbjct: 2 NIVITGAKGFVGKNLKADLTSTTDHH----------------------------IFEVHR 33
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
E ++A+ ++H+A + +E VS +L ++ K +
Sbjct: 34 QTKEEELESALLKADFIVHLAGVNRP--EHDKE-FSLGNVSYLDHVLDILTRNT-KKPAI 89
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
SS+ + D Y SK E+ E+AEE+G
Sbjct: 90 LLSSSI----------------QATQDNP---------YGESKLQGEQLLREYAEEYGNT 124
Query: 186 LVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE--EYSMLLNISMVHIDDVARAHI 240
+ + G + P + + N E + +++ ++DD+
Sbjct: 125 VYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIK 181
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 6e-14
Identities = 41/240 (17%), Positives = 71/240 (29%), Gaps = 49/240 (20%)
Query: 1 MEEE--KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASER 58
MEE K ++ + GGTG+IG+ ++ L G+ R + + L S
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEF-----QSLG 59
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
I +L+ E + VI A + IL++ +
Sbjct: 60 AIIVKGELDEHEKLVELMKKVDVVISALAF--------------PQILDQFKILEAIKVA 105
Query: 119 GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEF 178
G +KR + + F + D I L + + +R
Sbjct: 106 GNIKRFLPSD------------------FGVEEDRINALPPFEALIE-----RKRMIRRA 142
Query: 179 AEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
EE + + + FI L V G E +M + D+
Sbjct: 143 IEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAK-----FAMNYEQDIGLY 197
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 8e-14
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTV----RSDPEQK--RDLSFLTNLPRASERLQ 60
+ +TGG GF+GS L ++ + V RS+ R S + +
Sbjct: 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71
Query: 61 IFNADLNNPESFD-AAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119
+ AD+NNP + H AA D E V ++ + +L+
Sbjct: 72 VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELV-MKTNYQAFLNLLEIARSKK 130
Query: 120 TVKRVVYTSSAST 132
+V+Y SSA
Sbjct: 131 --AKVIYASSAGV 141
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 2e-12
Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 39/192 (20%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
+ + G G I L LL + + R + + + + ER+ +
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGR-QLKTRIPPEIIDH-----ERVTVIEGS 60
Query: 66 LNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
NP + A+ V A S I+K+ + ++RV+
Sbjct: 61 FQNPGXLEQAVTNAEVVFVGAMESG---------------SDMASIVKALSRXN-IRRVI 104
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
S A + + E + D I + ER A E L+
Sbjct: 105 GVSMA----GLSGEFPVALEKWTFDNLPISYVQ------------GERQARNVLRESNLN 148
Query: 186 LVTIIPSFVTGP 197
+ +++
Sbjct: 149 YTILRLTWLYND 160
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-12
Identities = 36/202 (17%), Positives = 63/202 (31%), Gaps = 46/202 (22%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTT----VRSDPEQKRDLSFLTNLPRA-SERLQI 61
+ + G G +G L RL+ G D P S +
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID-----VFQ--PEAPAGFSGAVDA 68
Query: 62 FNADLNNPESFDAAI-AGCTGVIHVAAPIDIHG-KEPEEVIIQRA----VSGTIGILKSC 115
ADL+ P + + A + H+AA + + + + + GT + +
Sbjct: 69 RAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFD-----KGYRINLDGTRYLFDAI 123
Query: 116 ----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETFW----SDVDYIRKLDIWGKSYKLS 167
K G RVV+TSS + F + + F + SY
Sbjct: 124 RIANGKDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLT-------------SYGTQ 168
Query: 168 KTLAERAALEFAEEHGLDLVTI 189
K + E +++ D + I
Sbjct: 169 KAICELLLSDYSRRGFFDGIGI 190
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 4e-12
Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 46/238 (19%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASER-LQIFN 63
+ ++ + G TG IG ++ + G VR + + + +
Sbjct: 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
D+N+ E+ AI VI A + I + I+K+ ++G VK+
Sbjct: 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVK--------------IIKAIKEAGNVKK 107
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
+ F DVD ++ + ++ + + E G
Sbjct: 108 FFPSE------------------FGLDVDRHDAVEPVRQVFE-----EKASIRRVIEAEG 144
Query: 184 LDLVTIIPSFVTG---PFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ + TG + A +++G+ + V DV
Sbjct: 145 VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVK-----GAYVTEADVGTF 197
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-12
Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 45/238 (18%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+ R+ + G TG+IG + LD G+ VR + I +
Sbjct: 3 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 62
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+++ S A+ VI + I + + I+K+ + GTVKR
Sbjct: 63 GSIDDHASLVEAVKNVDVVISTVGSLQIESQ--------------VNIIKAIKEVGTVKR 108
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
+ F +DVD + ++ KS K RA E G
Sbjct: 109 FFPSE------------------FGNDVDNVHAVE-PAKSVFEVKAKVRRA----IEAEG 145
Query: 184 LDLVTIIPSFVTG---PFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ + + G + + +++G+ + V +D+
Sbjct: 146 IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR-----VVFVKEEDIGTF 198
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 1e-11
Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 50/243 (20%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR----SDPEQKRDLSFLTNLPRASERL 59
+K RV + GGTG+IG ++ + G+ R S+ ++ + L +
Sbjct: 3 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-----KQLGA 57
Query: 60 QIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119
++ A L++ + A+ VI A + E++ + A ++G
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEAG 107
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
+KR + + F D D + G + K R
Sbjct: 108 NIKRFLPSE------------------FGMDPDIMEHALQPGSITFIDK----RKVRRAI 145
Query: 180 EEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN----ISMVHIDDV 235
E + + + G F + G + R++ + + V DDV
Sbjct: 146 EAASIPYTYVSSNMFAGYFAGS--LAQLDGHMMPP---RDKVLIYGDGNVKGIWVDEDDV 200
Query: 236 ARA 238
Sbjct: 201 GTY 203
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-11
Identities = 37/252 (14%), Positives = 81/252 (32%), Gaps = 49/252 (19%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD 65
++ + G G IG+ L +L +G + SD + + + P +
Sbjct: 4 KILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLN-TDVVNSGPF-------EVVN 53
Query: 66 LNNPESFDAAIA--GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
+ + + T + +AA + ++ ++ +L +K+
Sbjct: 54 ALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKK 112
Query: 124 VVYTSSAS------TVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
+ + SS + + + M T Y +SK ER
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTV----------------YGISKQAGERWCEY 156
Query: 178 FAEEHGLDLVTIIPSF-VTGPFICPQLAGSVRGTLAMVMGNR----EEYSMLLN----IS 228
+ +G+D V I + G A+ + + ++Y L+ +
Sbjct: 157 YHNIYGVD-VRSIRYPGLISW---STPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMP 212
Query: 229 MVHIDDVARAHI 240
M+++DD A I
Sbjct: 213 MMYMDDAIDATI 224
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-11
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 19/132 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD-----HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQI 61
RV VTG TGF G WL + L GYS+ L + ++ +Q
Sbjct: 11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL------TAPTVPSLFETARV---ADGMQS 61
Query: 62 FNADLNNPESFDAAIAGC--TGVIHVAA-PIDIHG-KEPEEVIIQRAVSGTIGILKSCLK 117
D+ + +I V H+AA P+ EP E V GT+ +L++
Sbjct: 62 EIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVET-YSTNVMGTVYLLEAIRH 120
Query: 118 SGTVKRVVYTSS 129
G VK VV +S
Sbjct: 121 VGGVKAVVNITS 132
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-11
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 36/212 (16%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSV-----RTTVRSDPEQKRDLSFLTNLPRA 55
ME+++ R+ +TGG GF+GS L +L+ G+ V T R KR++
Sbjct: 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-----KRNVEHWIGHE-- 75
Query: 56 SERLQIFNADLNNPESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGIL 112
++ N D+ P + + H+A+ P + P + ++ GT+ +L
Sbjct: 76 --NFELINHDVVEPLYIE-----VDQIYHLASPASPPNYM-YNPIK-TLKTNTIGTLNML 126
Query: 113 KSCLKSGTVKRVVYTSSASTVHFSGK-DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLA 171
+ G R++ S+ S V+ G +V E +W V+ I Y K +A
Sbjct: 127 GLAKRVG--ARLLLAST-SEVY--GDPEVHPQSEDYWGHVNPIGPR----ACYDEGKRVA 177
Query: 172 ERAALEFAEEHGLDLVTIIPSFVT-GPFICPQ 202
E + ++ G++ V + F T GP +
Sbjct: 178 ETMCYAYMKQEGVE-VRVARIFNTFGPRMHMN 208
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 1e-10
Identities = 29/237 (12%), Positives = 55/237 (23%), Gaps = 48/237 (20%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
V + G +G G L+ +L+ G V R + A + +
Sbjct: 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVV 70
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
D + + +A G V + + + G K
Sbjct: 71 DFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVD--RDYVLKSAELAKAGG-CKHF 127
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
SS S+ Y++ K E E
Sbjct: 128 NLLSSKGA-------------DKSSNFLYLQ-----------VKGEVEAKVEEL----KF 159
Query: 185 DLVTII-PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
D ++ P + + + + + V + V RA +
Sbjct: 160 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAML 211
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 2e-10
Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 14/131 (10%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
+ KGRV + G TGFIG ++ LD R P L +
Sbjct: 6 VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL--EDKGAI 63
Query: 61 IFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGT 120
I +N E+ + + I V + + + +++ GT
Sbjct: 64 IVYGLINEQEAMEKILKEHEIDI-VVSTVGGESILDQIALVKAMK-----------AVGT 111
Query: 121 VKRVVYTSSAS 131
+KR + +
Sbjct: 112 IKRFLPSEFGH 122
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-10
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 23/123 (18%)
Query: 10 VTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
+TG TG +G ++I L+ + VR +P + + L A++ + + AD
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQAL--------AAQGITVRQADYG 54
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
+ + +A+ G ++ +++ +I A +G VK + YT
Sbjct: 55 DEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAK-----------AAG-VKFIAYT 102
Query: 128 SSA 130
S
Sbjct: 103 SLL 105
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-10
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 24/125 (19%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN 68
+TG TG +G+ + + + + VR + E+ D ++ + D N
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDD--------WRGKVSVRQLDYFN 55
Query: 69 PESFDAAIAGCTGVIHVAAPIDIHGKEPEEV--IIQRAVSGTIGILKSCLKSGTVKRVVY 126
ES A G V+ + + I K EV ++ A +SG V +++
Sbjct: 56 QESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAK-----------QSG-VAHIIF 103
Query: 127 TSSAS 131
+
Sbjct: 104 IGYYA 108
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 5e-10
Identities = 34/239 (14%), Positives = 69/239 (28%), Gaps = 47/239 (19%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
++ + GGTG+IG +++ L + R S S + I
Sbjct: 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
++ E + + VI I + I I+ + +G +KR
Sbjct: 63 GEMEEHEKMVSVLKQVDIVISALPFPMISSQ--------------IHIINAIKAAGNIKR 108
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
+ + F + D I+ L + + +R E
Sbjct: 109 FLPSD------------------FGCEEDRIKPLPPFESVLE-----KKRIIRRAIEAAA 145
Query: 184 LDLVTIIPSFVTGPFICPQLAG----SVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
L + + F+ L R ++ G E + + +D+A+
Sbjct: 146 LPYTYVSANCFGAYFV-NYLLHPSPHPNRNDDIVIYGTGETK-----FVLNYEEDIAKY 198
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 6e-10
Identities = 43/281 (15%), Positives = 74/281 (26%), Gaps = 54/281 (19%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTT---VRSDPEQKRDLSFLTNLPRASERLQIF- 62
RV V GG G+ G + L Y V VR + + L LT + +R+ +
Sbjct: 13 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72
Query: 63 ----------NADLNNPESFDAAIAG--CTGVIHVAAPIDIHGKEPEEVIIQRA------ 104
D+ + E + V+H P +I +
Sbjct: 73 ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSA----PYSMIDRSRAVYTQH 128
Query: 105 --VSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVD--MLDETFWSDVDYIRKLDIW 160
V GT+ +L + + G +V + D++ + T D +
Sbjct: 129 NNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQA 188
Query: 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220
Y LSK + G+ + V G L +
Sbjct: 189 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM---HEELRNRLDYDAV 245
Query: 221 YSMLLNI---------------------SMVHIDDVARAHI 240
+ LN + I D +
Sbjct: 246 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVE 286
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-10
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 10 VTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
VTG TG +G +I LL + VR + E+ L A + +++ + D N
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTL--------ADQGVEVRHGDYN 55
Query: 68 NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127
PES A AG + ++ ++ P H ++ V +K+ +G VK + YT
Sbjct: 56 QPESLQKAFAGVSKLLFISGP---HYDNTLLIVQHANV------VKAARDAG-VKHIAYT 105
Query: 128 SSA 130
A
Sbjct: 106 GYA 108
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 35/150 (23%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-----RSDPEQKRDLSFLTNLPRA 55
E V VTGG G+IGS ++ L+++GY V S + L LT
Sbjct: 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDC--VVADNLSNSTYDSVARLEVLTK---- 60
Query: 56 SERLQIFNADLNNPESFDAAIA--GCTGVIHVAA----------PIDIHGKEPEEVIIQR 103
+ + DL + + + VIH A P+ +
Sbjct: 61 -HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYY---------HN 110
Query: 104 AVSGTIGILKSCLKSGTVKRVVYTSSASTV 133
+ GT+ +L+ + V + V++SSA TV
Sbjct: 111 NILGTVVLLELMQQYN-VSKFVFSSSA-TV 138
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-09
Identities = 45/245 (18%), Positives = 71/245 (28%), Gaps = 64/245 (26%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL- 59
M RV + G TG G L+ R+L + + L PR +
Sbjct: 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA-------LAEHPRLDNPVG 53
Query: 60 QIFNADLNNPESFDAAIAGCTGVIHVAAP-----IDIHGKEPEEVIIQRAVSGTIGILKS 114
+ S D A C G A + + + K
Sbjct: 54 PLAELLPQLDGSIDTAFC-CLGTTIKEAGSEEAFRAVD------------FDLPLAVGKR 100
Query: 115 CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERA 174
L+ G + + S+ G D S + Y R K E+A
Sbjct: 101 ALEMG-ARHYLVVSAL------GADAK-------SSIFYNR-----------VKGELEQA 135
Query: 175 ALEFAEEHGLDLVTII-PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHID 233
E +TI PS + GP +LA + +A ++ + +
Sbjct: 136 LQEQGWPQ----LTIARPSLLFGPREEFRLAEILAAPIARILPGK--------YHGIEAC 183
Query: 234 DVARA 238
D+ARA
Sbjct: 184 DLARA 188
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 4e-09
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 37/150 (24%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSV---------RTTVRSDPEQKRDLSFLTNLPRA 55
+V VTGG G+IGS ++ LL+ GY S PE R + LT
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG---- 57
Query: 56 SERLQIFNADLNNPESFDAAIA--GCTGVIHVAA----------PIDIHGKEPEEVIIQR 103
++ D+ + + VIH A P+D + +
Sbjct: 58 -RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYY---------RV 107
Query: 104 AVSGTIGILKSCLKSGTVKRVVYTSSASTV 133
++GTI +L+ G VK +V++SSA TV
Sbjct: 108 NLTGTIQLLEIMKAHG-VKNLVFSSSA-TV 135
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 52.8 bits (128), Expect = 2e-08
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-----RSDPEQKRDLSFLTNLPRASE 57
KG + VTGG G+IGS + LL HGY V + S E + +T +
Sbjct: 3 STKGTILVTGGAGYIGSHTAVELLAHGYDV--VIADNLVNSKREAIARIEKITG-----K 55
Query: 58 RLQIFNADLNNPESFDAAIA--GCTGVIHVAA----------PIDIHGKEPEEVIIQRAV 105
D+++ + T IH AA PI+ + + +
Sbjct: 56 TPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYY---------RNNL 106
Query: 106 SGTIGILKSCLKSGTVKRVVYTSSASTV 133
+ +L+ + VKR+V++SSA TV
Sbjct: 107 DSLLSLLRVMRERA-VKRIVFSSSA-TV 132
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 20/84 (23%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V +TG G +G L +L G+ V VR + P+ +R
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKE-------------PKPGKRF------W 189
Query: 67 NNPESFDAAIAGCTGVIHVA-API 89
+ + G ++H+A PI
Sbjct: 190 DPLNPASDLLDGADVLVHLAGEPI 213
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 22/197 (11%)
Query: 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQ 60
+ RV + G GFIG+ L RLL Y V D FL +
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEV---YGLDIGSDAISRFLNH-----PHFH 363
Query: 61 IFNADL-NNPESFDAAIAGCTGVIHVAA---PIDIHGKEPEEVIIQRAVSGTIGILKSCL 116
D+ + E + + C V+ + A PI+ + + P V + + I++ C+
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIE-YTRNPLRV-FELDFEENLRIIRYCV 421
Query: 117 KSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAAL 176
K KR+++ S+ S V+ D DE + + W Y +SK L +R
Sbjct: 422 KYR--KRIIFPST-SEVYGMCSD-KYFDEDHSNLIVGPVNKPRW--IYSVSKQLLDRVIW 475
Query: 177 EFAEEHGLDLVTIIPSF 193
+ E+ GL T+ F
Sbjct: 476 AYGEKEGLQ-FTLFRPF 491
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-07
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 35/144 (24%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-----RSDPEQKRDLSFLTNLPRASERLQI 61
RV VTGG+G+IGS ++LL +G+ V + S + L +
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDV--IILDNLCNSKRSVLPVIERLGG-----KHPTF 54
Query: 62 FNADLNNPESFDAAIA--GCTGVIHVAA----------PIDIHGKEPEEVIIQRAVSGTI 109
D+ N + VIH A P++ + V+GT+
Sbjct: 55 VEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY---------DNNVNGTL 105
Query: 110 GILKSCLKSGTVKRVVYTSSASTV 133
++ + + VK +++SSA TV
Sbjct: 106 RLISAMRAAN-VKNFIFSSSA-TV 127
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-06
Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 47/238 (19%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
G + G G+ L L G+ + T R+ P+Q + + +
Sbjct: 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-PDQMEAI--------RASGAEPLLW 54
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
P ++ G T ++ AP G +P + ++ ++ + V
Sbjct: 55 PGEEP-----SLDGVTHLLISTAPDS--GGDPVLAALGDQIA---------ARAAQFRWV 98
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
Y S+ + + D +DET R + ++ L
Sbjct: 99 GYLSTTAV--YGDHDGAWVDETTPLTPTAAR-----------GRWRVMAEQ-QWQAVPNL 144
Query: 185 DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242
L + + GP G + G R S +H++D+A+
Sbjct: 145 PLHVFRLAGIYGP-------GRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAAS 195
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-06
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD---LSFLTNLPRASERLQIFN 63
+ +TGGTG G + ++LD + + V S E K+ + F R++ F
Sbjct: 23 TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF------NDPRMRFFI 76
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKE--PEEVIIQRAVSGTIGILKSCLKSGTV 121
D+ + E + A+ G IH AA + E P E I+ + G ++ +CLK+ +
Sbjct: 77 GDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLEC-IKTNIMGASNVINACLKNA-I 134
Query: 122 KRVVYTSS 129
+V+ S+
Sbjct: 135 SQVIALST 142
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 4e-06
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 31/135 (22%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRAS-----ERLQIFNA 64
+ GG G+IGS + +L+D G SV V + NL E + +N
Sbjct: 6 ICGGAGYIGSHAVKKLVDEGLSV--VV------------VDNLQTGHEDAITEGAKFYNG 51
Query: 65 DLNNPESFDAAIA--GCTGVIHVAAPIDIHGKEPEEVIIQRA-----VSGTIGILKSCLK 117
DL + V+H AA + + V G + +L+ +
Sbjct: 52 DLRDKAFLRDVFTQENIEAVMHFAADSLV----GVSMEKPLQYYNNNVYGALCLLEVMDE 107
Query: 118 SGTVKRVVYTSSAST 132
V + +++S+A+T
Sbjct: 108 FK-VDKFIFSSTAAT 121
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 1e-05
Identities = 32/251 (12%), Positives = 70/251 (27%), Gaps = 56/251 (22%)
Query: 25 LLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC----- 79
DH +++ + S + R L L + ++ N ++++A C
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENC---LLVLL-NVQNAKAWNAFNLSCKILLT 271
Query: 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSG-----TIGILKSCL--KSGTVKRVVYTSSAST 132
T V + + + +L L + + R T
Sbjct: 272 TRFKQVTDFLS--AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-----EVLT 324
Query: 133 VH------FSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL-- 184
+ + D L W D + ++ + + +L LE AE +
Sbjct: 325 TNPRRLSIIAESIRDGLAT--W---DNWKHVNCDKLTTIIESSL---NVLEPAEYRKMFD 376
Query: 185 DLV-----TIIPSFV------TGPFICPQ--LAGSVRGTLAMVMGNREEYSMLLNISM-- 229
L IP+ + + + +L S + +I +
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS-IPSIYLEL 435
Query: 230 -VHIDDVARAH 239
V +++ H
Sbjct: 436 KVKLENEYALH 446
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 22/133 (16%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF---LTNLP--RASERLQI 61
++ +TGG GF+GS L L G + + D +LS NL + +
Sbjct: 3 KLLITGGCGFLGSNLASFALSQGIDL---IVFD-----NLSRKGATDNLHWLSSLGNFEF 54
Query: 62 FNADLNNPESFDAAIAGC--TGVIHVAAP--ID--IHGKEPEEVIIQRAVSGTIGILKSC 115
+ D+ N I H+A + I P + V GT+ +L++
Sbjct: 55 VHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDN--PCM-DFEINVGGTLNLLEAV 111
Query: 116 LKSGTVKRVVYTS 128
+ + ++Y+S
Sbjct: 112 RQYNSNCNIIYSS 124
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 28/149 (18%)
Query: 7 RVCVTGGTGFIGSWLIMRLLD---------------HGYSVRTTVRSDPEQKRDLSFLTN 51
RV V GG G+IGS + LL HG S R + +K S
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63
Query: 52 LPRASERLQIFNADLNNPESFDAAIA---GCTGVIHVAAPIDIHGKEPEEVIIQRA---- 104
P A + D+ N + + V+H+ A + + E V
Sbjct: 64 PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAV----GESVRDPLKYYDN 119
Query: 105 -VSGTIGILKSCLKSGTVKRVVYTSSAST 132
V G + +L++ L +++++SSA+
Sbjct: 120 NVVGILRLLQAMLLHK-CDKIIFSSSAAI 147
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 4e-05
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT------NLP--RASER 58
R+ VTGG GFIGS + +LL Y L LT NL A R
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEV-----IVLDSLTYAGNRANLAPVDADPR 56
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAP--ID--IHGKEPEEVIIQRAVSGTIGILKS 114
L+ + D+ + + G ++H AA +D I G + V GT +L+
Sbjct: 57 LRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASV---FTETNVQGTQTLLQC 113
Query: 115 CLKSGTVKRVVYTS 128
+ +G V RVV+ S
Sbjct: 114 AVDAG-VGRVVHVS 126
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 3e-04
Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 24/134 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT------NLP--RASER 58
++ VTGG GFIGS I +L+ + L NL R
Sbjct: 5 KLLVTGGMGFIGSNFIRYILEKHPDWEVIN---------IDKLGYGSNPANLKDLEDDPR 55
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAP--ID--IHGKEPEEVIIQRAVSGTIGILKS 114
D+ + E + GV+H+AA +D I PE + V GT +L+S
Sbjct: 56 YTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISS--PEI-FLHSNVIGTYTLLES 112
Query: 115 CLKSGTVKRVVYTS 128
+ R V+ S
Sbjct: 113 IRRENPEVRFVHVS 126
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 5e-04
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 24/130 (18%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT---NL----P 53
M + K + VTGG GFIGS + + ++ V TV L LT N
Sbjct: 1 MSQFK-NIIVTGGAGFIGSNFVHYVYNNHPDVHVTV---------LDKLTYAGNKANLEA 50
Query: 54 RASERLQIFNADLNNPESFDAAIAGCTGVIHVAAP--ID--IHGKEPEEVIIQRAVSGTI 109
+R+++ D+ + E D A ++H AA D ++ P I GT
Sbjct: 51 ILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSP---FIHTNFIGTY 107
Query: 110 GILKSCLKSG 119
+L++ K
Sbjct: 108 TLLEAARKYD 117
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 243 | |||
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.98 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.98 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.98 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.98 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.97 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.97 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.97 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.97 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.97 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.96 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.96 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.96 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.96 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.96 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.96 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.96 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.96 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.96 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.96 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.96 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.96 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.96 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.96 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.96 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.95 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.95 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.95 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.95 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.95 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.95 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.95 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.95 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.95 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.95 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.95 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.95 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.95 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.95 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.95 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.95 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.95 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.95 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.95 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.95 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.95 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.95 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.95 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.95 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.95 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.95 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.95 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.95 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.95 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.95 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.95 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.95 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.95 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.95 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.95 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.95 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.95 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.95 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.95 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.95 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.95 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.95 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.95 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.95 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.95 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.95 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.95 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.95 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.95 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.95 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.95 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.95 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.95 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.95 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.95 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.95 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.95 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.95 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.95 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.95 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.95 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.95 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.95 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.95 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.95 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.95 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.95 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.95 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.95 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.95 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.95 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.95 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.95 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.95 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.95 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.95 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.95 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.94 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.94 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.94 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.94 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.94 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.94 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.94 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.94 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.94 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.94 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.94 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.94 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.94 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.94 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.94 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.94 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.94 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.94 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.94 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.94 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.94 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.94 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.94 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.94 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.94 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.94 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.94 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.94 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.94 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.94 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.94 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.94 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.94 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.94 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.94 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.94 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.94 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.94 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.94 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.94 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.94 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.94 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.94 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.94 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.94 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.94 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.94 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.94 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.94 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.94 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.94 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.94 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.94 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.94 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.94 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.94 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.94 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.94 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.94 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.94 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.94 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.94 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.94 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.94 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.94 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.94 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.94 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.94 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.94 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.94 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.94 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.94 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.94 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.94 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.93 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.93 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.93 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.93 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.93 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.93 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.93 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.93 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.93 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.93 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.93 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.93 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.93 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.93 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.93 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.93 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.93 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.93 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.93 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.93 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.93 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.93 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.93 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.93 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.93 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.92 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.92 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.92 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.92 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.92 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.92 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.92 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.92 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.92 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.92 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.92 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.92 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.92 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.92 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.92 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.91 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.91 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.9 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.9 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.89 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.89 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.88 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.88 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.88 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.88 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.87 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.86 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.85 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.85 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.83 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.83 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.82 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.76 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.76 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.75 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.74 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.74 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.74 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.73 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.72 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.7 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.53 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.52 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.48 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.45 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.26 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.14 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 99.11 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 99.09 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.08 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.07 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.0 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.96 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.94 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.91 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.78 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.77 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.76 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.72 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.7 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.7 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.62 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.59 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.57 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.56 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.46 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.45 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.38 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.35 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.33 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.32 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 98.31 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 98.29 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 98.17 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 98.17 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 98.14 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.12 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 98.12 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.11 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.11 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.09 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.09 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 98.09 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.07 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 98.04 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 98.02 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 98.01 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.01 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 98.01 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 98.01 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 98.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.99 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.98 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.93 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.92 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.91 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.9 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.89 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.88 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.86 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.85 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.85 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.84 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.84 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.84 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.82 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.81 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.81 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.78 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.77 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.75 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.74 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.74 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.73 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.72 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.71 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.71 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.7 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.69 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.69 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.68 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.67 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.66 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.66 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.65 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.65 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.65 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.64 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.63 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.63 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.62 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.62 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.62 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.62 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.61 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.59 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.59 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.58 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.57 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.57 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.57 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.54 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.52 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.52 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.51 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.48 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.46 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.46 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.46 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.46 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.44 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 97.44 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.43 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.43 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.42 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.4 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.4 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.4 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.39 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.38 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.38 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 97.38 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.35 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.34 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.34 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.34 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 97.33 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.33 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.32 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.32 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.31 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.31 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.3 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.3 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.28 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.28 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.26 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 97.26 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.25 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.25 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.23 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.22 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.21 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.21 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.21 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.19 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 97.19 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 97.19 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.18 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.18 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.17 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.17 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.16 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.16 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.15 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.15 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.14 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.14 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.13 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.12 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 97.12 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 97.12 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.11 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.11 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 97.1 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.1 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 97.08 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.08 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.08 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.07 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.07 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.07 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.06 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.06 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.05 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.04 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.04 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.03 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.03 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.03 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.02 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.02 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.02 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.0 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.0 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.99 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.99 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.99 |
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=269.44 Aligned_cols=241 Identities=45% Similarity=0.838 Sum_probs=173.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|..++|+|||||||||||++++++|+++|++|++++| +.+.......+...+....+++++.+|++|.+++.++++++|
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT 79 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC-CcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence 6667889999999999999999999999999999999 443221222211111111358899999999999999999999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|||+|++......++....+++|+.++.+++++|++.+++++|||+||.+++++......+++|+.+...+...+..++
T Consensus 80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (337)
T 2c29_D 80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT 159 (337)
T ss_dssp EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence 99999987643334555568999999999999999987657899999998766554333445788876655443333445
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
.++|+.+|.++|.++..+++++|++++++||+++|||.........+........+....+......+++|++|+|++++
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~ 239 (337)
T 2c29_D 160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239 (337)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHH
Confidence 67899999999999999887789999999999999997654433222222122333332222222335999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
++
T Consensus 240 ~~ 241 (337)
T 2c29_D 240 YL 241 (337)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=261.23 Aligned_cols=236 Identities=58% Similarity=1.050 Sum_probs=167.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+|||||||||||++++++|+++|++|++++|+++........+...+....+++++.+|++|.+++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 37899999999999999999999999999998822211111111111111112578999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.......++....+++|+.++.+++++|++. + +++|||+||.+++++.+....+++|+.+.+.++..+..+..+.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~ 159 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWN 159 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccccc
Confidence 9976432222333458999999999999999998 6 8999999998766544333446778777655444333333346
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+++++++++|++++++||+++|||.........+..+.....+....+.. ..++++|++|+|++++++
T Consensus 160 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~i~v~Dva~a~~~~ 237 (322)
T 2p4h_X 160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIYL 237 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE-EEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC-CCcCEEEHHHHHHHHHHH
Confidence 999999999999998877899999999999999975543322222222333444333332 334899999999998765
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=262.48 Aligned_cols=227 Identities=20% Similarity=0.177 Sum_probs=176.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCC--CCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPR--ASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++|+..........+..... ...+++++.+|++|.+++.++++++|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 468999999999999999999999999999999954433333333222100 004899999999999999999999999
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ....+....+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+.+.. |
T Consensus 104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~---------p 171 (351)
T 3ruf_A 104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDH--PALPKVEENIGN---------P 171 (351)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCCC---------C
T ss_pred EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCC--CCCCCccCCCCC---------C
Confidence 9999997443 1112334789999999999999999999 9999999999877544 335677877643 5
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHH-HHhcCccccc--cccCcCceeHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLA-MVMGNREEYS--MLLNISMVHIDDV 235 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~Dv 235 (243)
.+.|+.+|.++|.+++.+++++|++++++||+++|||+..... ..++..+.. ...+....+. +++.++++|++|+
T Consensus 172 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 172 LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence 6789999999999999999889999999999999999765432 234444443 4445544443 3678899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++.+
T Consensus 252 a~a~~~~ 258 (351)
T 3ruf_A 252 IQMNILS 258 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=264.79 Aligned_cols=237 Identities=40% Similarity=0.696 Sum_probs=164.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|||||||||||++++++|+++|++|++++| +.+.......+...+ ...+++++++|++|.+++.++++++|+||
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi 85 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVF 85 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES-CTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc-CcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEE
Confidence 3579999999999999999999999999999999 443221111111111 12468999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC--cccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD--VDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+|++......++..+.+++|+.++.+++++|++.+.+++|||+||.+++++.+.. ..+++|+.+...+...+..++.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 165 (338)
T 2rh8_A 86 HVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT 165 (338)
T ss_dssp EESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred EeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence 99987643323343358999999999999999988448999999998755433211 1367888765544433333334
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-------cccCcCceeHHH
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-------MLLNISMVHIDD 234 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~v~D 234 (243)
++|+.+|.++|.+++.+++++|++++++||+++|||.........+..+.....+....+. ..+.++++|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~D 245 (338)
T 2rh8_A 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED 245 (338)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHH
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHH
Confidence 4699999999999999887789999999999999997654433333333222333322121 022348999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++++
T Consensus 246 va~a~~~~ 253 (338)
T 2rh8_A 246 VCRAHIFV 253 (338)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=255.15 Aligned_cols=224 Identities=19% Similarity=0.206 Sum_probs=169.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
+++|+|||||||||||++++++|+++| ++|++++|..... ....+... ....+++++.+|++|.+.+.+++++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 98 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKERD 98 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence 356899999999999999999999999 6777777743211 11222111 1235899999999999999999987
Q ss_pred ccEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 79 CTGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 79 ~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
+|+|||+|+..... ..++....+++|+.++.+++++|++.+ +++|||+||.++|+... ...+++|+.+..
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~-~~~~~~E~~~~~------- 169 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLG-KTGRFTEETPLA------- 169 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCC-SSCCBCTTSCCC-------
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCC-cCCCcCCCCCCC-------
Confidence 99999999976542 223445889999999999999999999 99999999998775543 345677877543
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccc--cccCcCceeHHH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYS--MLLNISMVHIDD 234 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~D 234 (243)
|.+.|+.+|.++|.+++.+++++|++++++||+.+|||+.... ..+..+.. ...+.+..+. +.+.++++|++|
T Consensus 170 --p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 245 (346)
T 4egb_A 170 --PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD 245 (346)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHH
T ss_pred --CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHH
Confidence 5578999999999999999988999999999999999975433 34444444 3344444443 356789999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 246 va~a~~~~ 253 (346)
T 4egb_A 246 HCSAIDVV 253 (346)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=250.36 Aligned_cols=209 Identities=17% Similarity=0.202 Sum_probs=169.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+|||||||||||++++++|+++|++|++++|+ +.... + .+++++.+|++ .+++.++++++|+|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~----------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-I----------NDYEYRVSDYT-LEDLINQLNDVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC----------------CCEEEECCCC-HHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-C----------CceEEEEcccc-HHHHHHhhcCCCEEEE
Confidence 5799999999999999999999999999999995 32221 1 17899999999 9999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+|+..... ++ ...++.|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+++.. |.+.|
T Consensus 69 ~a~~~~~~--~~-~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~--~~~~~~E~~~~~---------p~~~Y 133 (311)
T 3m2p_A 69 LAATRGSQ--GK-ISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDE--TSLPWNEKELPL---------PDLMY 133 (311)
T ss_dssp CCCCCCSS--SC-GGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCG--GGCSBCTTSCCC---------CSSHH
T ss_pred ccccCCCC--Ch-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCCC---------CCchh
Confidence 99986654 33 3788999999999999999999 9999999998877543 335677776543 56789
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCccccc--cccCcCceeHHHHHHhhhc
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYS--MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~v~Dva~a~~~ 241 (243)
+.+|.++|.+++.+++++|++++++||+.+||+..... ..+..+... ..+....+. +++.++++|++|+|++++.
T Consensus 134 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~ 211 (311)
T 3m2p_A 134 GVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIY 211 (311)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHH
Confidence 99999999999999988999999999999999976543 334444444 344444443 3678899999999999887
Q ss_pred cC
Q 026091 242 FT 243 (243)
Q Consensus 242 ~~ 243 (243)
++
T Consensus 212 ~~ 213 (311)
T 3m2p_A 212 AL 213 (311)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=251.61 Aligned_cols=226 Identities=21% Similarity=0.279 Sum_probs=172.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--ccc
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCT 80 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d 80 (243)
+++|+|||||||||||++++++|+++|++|++++|+..........+... .+.+++++.+|++|.+++.++++ ++|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI--TGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH--HSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh--cCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 35679999999999999999999999999999999544322222222211 13478999999999999999998 799
Q ss_pred EEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 81 GVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 81 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
+|||+|+..... ..+...+.++.|+.++.++++++++.+ +++|||+||.++|+.. ...+++|+.+..
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~~--------- 148 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVP--ERSPIDETFPLS--------- 148 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSC--SSSSBCTTSCCB---------
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCC--CCCCCCCCCCCC---------
Confidence 999999975431 112234789999999999999999998 8999999999877433 345677776543
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcC-ccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCcccc---------
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHG-LDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREEY--------- 221 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~g-i~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~--------- 221 (243)
|.+.|+.+|.++|.+++.++.+++ ++++++||+++|||..... ...++..+.....+....+
T Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 228 (341)
T 3enk_A 149 ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPT 228 (341)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCC
Confidence 557899999999999999988875 9999999999999964321 1334455555554443222
Q ss_pred -ccccCcCceeHHHHHHhhhcc
Q 026091 222 -SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 -~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++.++++|++|+|++++++
T Consensus 229 ~~g~~~~~~i~v~Dva~a~~~~ 250 (341)
T 3enk_A 229 PDGTGVRDYIHVVDLARGHIAA 250 (341)
T ss_dssp TTSSCEECEEEHHHHHHHHHHH
T ss_pred CCCCeeEeeEEHHHHHHHHHHH
Confidence 236678999999999998764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=243.88 Aligned_cols=213 Identities=23% Similarity=0.254 Sum_probs=164.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||+|||||||||||++++++|+++| .++++.|+........ ..+++++.+|++| +++.++++++|+|||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih 69 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLKGAEEVWH 69 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence 4689999999999999999999999 5555555343222111 3478999999999 999999999999999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.... ...+++...+++|+.++.++++++++.+ +++|||+||.++|+.. ...+++|+.+. .|.+.
T Consensus 70 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~--~~~~~~E~~~~---------~~~~~ 137 (313)
T 3ehe_A 70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEA--KVIPTPEDYPT---------HPISL 137 (313)
T ss_dssp CCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSC--SSSSBCTTSCC---------CCCSH
T ss_pred CCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcC--CCCCCCCCCCC---------CCCCH
Confidence 9996543 3345566899999999999999999999 8999999999877543 34566776643 25678
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCc-cccc--cccCcCceeHHHHHHhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNR-EEYS--MLLNISMVHIDDVARAH 239 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~i~v~Dva~a~ 239 (243)
|+.+|.++|.+++.++.++|++++++||+.+|||+... ..+..+. ....+.. ..+. +++.++++|++|+|+++
T Consensus 138 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 214 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH---GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM 214 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence 99999999999999999999999999999999997543 2333333 3333322 2222 25678999999999999
Q ss_pred hccC
Q 026091 240 IFFT 243 (243)
Q Consensus 240 ~~~~ 243 (243)
++++
T Consensus 215 ~~~~ 218 (313)
T 3ehe_A 215 LFGL 218 (313)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8763
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=245.38 Aligned_cols=217 Identities=21% Similarity=0.277 Sum_probs=168.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
||+|||||||||||++++++|+++|++|++++|+..... . .. ..+++++.+|++|.+++.++++ ++|+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AI---TEGAKFYNGDLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GS---CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hc---CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 468999999999999999999999999999999433211 1 11 1278999999999999999998 89999
Q ss_pred EEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 83 IHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 83 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||+|+..... ..+++...+++|+.++.+++++|++.+ +++|||+||.++|... ...+++|+++.. |.
T Consensus 72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~--~~~~~~E~~~~~---------~~ 139 (330)
T 2c20_A 72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEV--DVDLITEETMTN---------PT 139 (330)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSC--SSSSBCTTSCCC---------CS
T ss_pred EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCC--CCCCCCcCCCCC---------CC
Confidence 9999975431 112345789999999999999999998 8999999999876543 345677876542 45
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC-------CCCcHHHHHHHHhcCcc--cc--------ccc
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMVMGNRE--EY--------SML 224 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~--~~--------~~~ 224 (243)
+.|+.+|.++|.+++.+++++|++++++||+++||+..... ...++..+.....+... .+ .++
T Consensus 140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 219 (330)
T 2c20_A 140 NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGT 219 (330)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSS
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCc
Confidence 77999999999999999888899999999999999963221 12345555554443322 11 235
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
+.++++|++|+|++++.+
T Consensus 220 ~~~~~v~v~Dva~a~~~~ 237 (330)
T 2c20_A 220 CIRDYIHVEDLVAAHFLG 237 (330)
T ss_dssp CEECEEEHHHHHHHHHHH
T ss_pred eeEeeEeHHHHHHHHHHH
Confidence 678999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=251.13 Aligned_cols=213 Identities=18% Similarity=0.202 Sum_probs=168.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|||||||||||++++++|+++|++|++++|+.. . .+++++.+|++|.+.+.++++++|+||
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-G--------------TGGEEVVGSLEDGQALSDAIMGVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-S--------------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-C--------------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence 4689999999999999999999999999999999433 1 377899999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+|+.......+ +...+++|+.++.+++++|++.+ +++|||+||.++|+.......+++|+.+.. |.+.
T Consensus 83 h~A~~~~~~~~~-~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~---------~~~~ 151 (347)
T 4id9_A 83 HLGAFMSWAPAD-RDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLC---------PNSP 151 (347)
T ss_dssp ECCCCCCSSGGG-HHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCC---------CCSH
T ss_pred ECCcccCcchhh-HHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCC---------CCCh
Confidence 999976553323 36899999999999999999999 999999999998766434556678876532 5678
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCcee-------------CCCCCCC---------CCCcHHHHHHHH-hcCccc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVT-------------GPFICPQ---------LAGSVRGTLAMV-MGNREE 220 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~-------------G~~~~~~---------~~~~~~~~~~~~-~~~~~~ 220 (243)
|+.+|.++|.+++.+++++|++++++||+++| ||+.... ....+..+.... .+.+..
T Consensus 152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (347)
T 4id9_A 152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH 231 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence 99999999999999998899999999999999 7643221 122233344333 333333
Q ss_pred cc--cccCcCc----eeHHHHHHhhhcc
Q 026091 221 YS--MLLNISM----VHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~--~~~~~~~----i~v~Dva~a~~~~ 242 (243)
+. +.+.+++ +|++|+|++++.+
T Consensus 232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~ 259 (347)
T 4id9_A 232 ILARNENGRPFRMHITDTRDMVAGILLA 259 (347)
T ss_dssp EEEECTTCCBCEECEEEHHHHHHHHHHH
T ss_pred EeCCCCcccCCccCcEeHHHHHHHHHHH
Confidence 33 2567888 9999999999875
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=247.31 Aligned_cols=222 Identities=20% Similarity=0.156 Sum_probs=169.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHH--cCCeEEEEEeCCchh------hchhhhhhcCCCCCCCeEEEecCCCChhhHHH
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLD--HGYSVRTTVRSDPEQ------KRDLSFLTNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
.++|+|||||||||||++++++|++ .|++|++++|+.... .......... ...+++++.+|++|.+.+.+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHH
Confidence 3568999999999999999999999 899999999944310 0011111111 23467999999999999999
Q ss_pred H-hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 75 A-IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 75 ~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
+ ..++|+|||+||..... .+++...+++|+.++.+++++|++.+ ++ |||+||.++|+... .+++|+.+..
T Consensus 86 ~~~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~---~~~~E~~~~~--- 156 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTK---APNVVGKNES--- 156 (362)
T ss_dssp HTTSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCC---SSBCTTSCCC---
T ss_pred hhccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCC---CCCCCCCCCC---
Confidence 9 78999999999976543 34456999999999999999999998 66 99999988775442 2677776543
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHH-HHhcCcccccc--ccCcC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLA-MVMGNREEYSM--LLNIS 228 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~-~~~~~~~~~~~--~~~~~ 228 (243)
|.+.|+.+|.++|.+++.++.+ ++++++||+++|||+..... ...+..+.. ...+....+.+ .+.++
T Consensus 157 ------p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 228 (362)
T 3sxp_A 157 ------PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD 228 (362)
T ss_dssp ------CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred ------CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence 5678999999999999998654 89999999999999765431 133444443 33444443322 56789
Q ss_pred ceeHHHHHHhhhccC
Q 026091 229 MVHIDDVARAHIFFT 243 (243)
Q Consensus 229 ~i~v~Dva~a~~~~~ 243 (243)
++|++|+|+++++++
T Consensus 229 ~i~v~Dva~ai~~~~ 243 (362)
T 3sxp_A 229 FVYIEDVIQANVKAM 243 (362)
T ss_dssp CEEHHHHHHHHHHHT
T ss_pred cEEHHHHHHHHHHHH
Confidence 999999999998763
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=244.82 Aligned_cols=216 Identities=22% Similarity=0.236 Sum_probs=160.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+|||||||||||++++++|+++|++|++++| ++..... +. ..+++++.+|++|.+++.++++++|+|||
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~---l~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHR-PSSQIQR---LA-----YLEPECRVAEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-TTSCGGG---GG-----GGCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-ChHhhhh---hc-----cCCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 358999999999999999999999999999999 4432221 11 12789999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+|+.... +.+++...+++|+.++.+++++|++.+ +++|||+||.++|........+ +|+.+..+.. ...+.|
T Consensus 84 ~a~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~-----~~~~~Y 155 (342)
T 2x4g_A 84 SAGYYPS-RPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLP-----SGKSSY 155 (342)
T ss_dssp C-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCC-----TTSCHH
T ss_pred CCccCcC-CCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCCCCCccc-----cccChH
Confidence 9997543 223445789999999999999999998 9999999999887654322233 6766543100 015679
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCC-CCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFI-CPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.+|.++|.+++.++++ |++++++||+.+||+.. .... ...+.....+....+ +++.++++|++|+|++++.+
T Consensus 156 ~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~ 229 (342)
T 2x4g_A 156 VLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTT---GRVITAIGNGEMTHY-VAGQRNVIDAAEAGRGLLMA 229 (342)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCST---THHHHHHHTTCCCEE-ECCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccH---HHHHHHHHcCCCccc-cCCCcceeeHHHHHHHHHHH
Confidence 99999999999999876 99999999999999976 2111 122223334444334 56778999999999998765
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=242.76 Aligned_cols=211 Identities=24% Similarity=0.271 Sum_probs=165.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|||||||||||++++++|+++|++|++++|+....... ...+++++.+|+.|.+ +.+++++ |+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~ 69 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF---------VNPSAELHVRDLKDYS-WGAGIKG-DVVFHF 69 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG---------SCTTSEEECCCTTSTT-TTTTCCC-SEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh---------cCCCceEEECccccHH-HHhhcCC-CEEEEC
Confidence 4799999999999999999999999999999943321111 1347899999999999 8888888 999999
Q ss_pred eeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 86 AAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 86 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
|+.... ...+++...+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+.+. .|.+.|
T Consensus 70 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~--~~~~~~e~~~~---------~p~~~Y 137 (312)
T 3ko8_A 70 AANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDA--DVIPTPEEEPY---------KPISVY 137 (312)
T ss_dssp CSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCC---------CCCSHH
T ss_pred CCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCC--CCCCCCCCCCC---------CCCChH
Confidence 996543 2334456899999999999999999999 9999999999887544 33566777543 256789
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCc-cccc--cccCcCceeHHHHHHhhh
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNR-EEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~-~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
+.+|.++|.+++.+++++|++++++||+++|||+... ..+..+.. ...+.. .... +.+.++++|++|+|++++
T Consensus 138 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 214 (312)
T 3ko8_A 138 GAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH---GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATL 214 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHH
Confidence 9999999999999998899999999999999997543 22333333 333322 2222 256789999999999988
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
++
T Consensus 215 ~~ 216 (312)
T 3ko8_A 215 AA 216 (312)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=245.95 Aligned_cols=216 Identities=14% Similarity=0.092 Sum_probs=167.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d 80 (243)
+|+|||||||||||++++++|+++ |++|++++|+... .. +. .+++++.+|++|.+++.++++ ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~~----~~------~~~~~~~~D~~d~~~~~~~~~~~~~d 70 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN-TD----VV------NSGPFEVVNALDFNQIEHLVEVHKIT 70 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS-CH----HH------HSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc-cc----cc------CCCceEEecCCCHHHHHHHHhhcCCC
Confidence 478999999999999999999999 8999999994332 11 11 156789999999999999998 899
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|||+|+........+....+++|+.++.+++++|++.+ +++|||+||.++|.... ...+.+|+.+. .|
T Consensus 71 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~---------~~ 139 (312)
T 2yy7_A 71 DIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTT-PKENTPQYTIM---------EP 139 (312)
T ss_dssp EEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTS-CSSSBCSSCBC---------CC
T ss_pred EEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCC-CCCCccccCcC---------CC
Confidence 999999875432112345889999999999999999998 89999999998775432 22455666542 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC---CCcHHHHHHHHhcCcccc--ccccCcCceeHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL---AGSVRGTLAMVMGNREEY--SMLLNISMVHIDDV 235 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dv 235 (243)
.++|+.+|.++|.+++.+++++|++++++||+.+||+...+.. ......+.....+.+... .+++.++++|++|+
T Consensus 140 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 219 (312)
T 2yy7_A 140 STVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDA 219 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHH
Confidence 5789999999999999998888999999999999998643322 123344444444444332 23678899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++.+
T Consensus 220 a~a~~~~ 226 (312)
T 2yy7_A 220 IDATINI 226 (312)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=247.50 Aligned_cols=227 Identities=19% Similarity=0.171 Sum_probs=171.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc-CCC-CCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN-LPR-ASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++|+.......+..+.. ... ...+++++.+|++|.+++.++++++|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 468999999999999999999999999999999944321112221111 000 024789999999999999999999999
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+++...+++|+.++.+++++|++.+ +++|||+||.++|... ...+++|+.+.. |
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~--~~~~~~E~~~~~---------~ 173 (352)
T 1sb8_A 106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIGK---------P 173 (352)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCCC---------C
T ss_pred EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCC--CCCCCCCCCCCC---------C
Confidence 9999997542 1112345789999999999999999998 8999999999876543 234667776532 5
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHHH-HHhcCcccccc--ccCcCceeHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTLA-MVMGNREEYSM--LLNISMVHIDDV 235 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~v~Dv 235 (243)
.+.|+.+|.++|.+++.+++++|++++++||+.+|||..... ....+..+.. ...+....+.+ ++.++++|++|+
T Consensus 174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 253 (352)
T 1sb8_A 174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 253 (352)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence 578999999999999999888899999999999999976433 2233433333 33444433332 567899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++.+
T Consensus 254 a~a~~~~ 260 (352)
T 1sb8_A 254 VQANLLA 260 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=245.93 Aligned_cols=223 Identities=19% Similarity=0.133 Sum_probs=169.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+||+|||||||||||++++++|+++|++|++++|+... .... ...+++++.+|++|.+++.++++++|+|
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~~d~V 97 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE-HMTE--------DMFCDEFHLVDLRVMENCLKVTEGVDHV 97 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS-SSCG--------GGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCcc-chhh--------ccCCceEEECCCCCHHHHHHHhCCCCEE
Confidence 357899999999999999999999999999999994332 1111 1237899999999999999999999999
Q ss_pred EEeeeccCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC---CcccccCCCCCchhhhhhc
Q 026091 83 IHVAAPIDIH--GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK---DVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 83 i~~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~---~~~~~~e~~~~~~~~~~~~ 157 (243)
||+|+..... ..+++...+++|+.++.+++++|++.+ +++|||+||.++|..... ...+++|+++. .
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~-------~ 169 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAW-------P 169 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-------S
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCC-------C
Confidence 9999975431 134456899999999999999999998 899999999887754321 11235555421 1
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHHHHHHHH-hcCc-cccc--cccCcCcee
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMV-MGNR-EEYS--MLLNISMVH 231 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~-~~~~-~~~~--~~~~~~~i~ 231 (243)
..|.+.|+.+|.++|.+++.+++++|++++++||+++|||....... ..+..+.... .+.+ ..+. +.+.++++|
T Consensus 170 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 249 (379)
T 2c5a_A 170 AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF 249 (379)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence 13557899999999999999988889999999999999997543221 2344444333 4443 2322 256789999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 250 v~Dva~ai~~~ 260 (379)
T 2c5a_A 250 IDECVEGVLRL 260 (379)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=249.27 Aligned_cols=224 Identities=21% Similarity=0.270 Sum_probs=170.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC-ChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN-NPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~ 81 (243)
+||+|||||||||||++++++|+++ |++|++++|+ ...... +.. ..+++++.+|++ |.+.+.++++++|+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~---~~~----~~~v~~~~~Dl~~d~~~~~~~~~~~d~ 94 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ-TDRLGD---LVK----HERMHFFEGDITINKEWVEYHVKKCDV 94 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC-CTTTGG---GGG----STTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC-hhhhhh---hcc----CCCeEEEeCccCCCHHHHHHHhccCCE
Confidence 4689999999999999999999998 9999999994 422211 111 248999999999 99999999999999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+..... ..++....+++|+.++.+++++|++.+ ++|||+||.++|+.. ...+++|+++... ..+...|
T Consensus 95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~--~~~~~~e~~~~~~--~~p~~~p 168 (372)
T 3slg_A 95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMC--ADEQFDPDASALT--YGPINKP 168 (372)
T ss_dssp EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSC--CCSSBCTTTCCEE--ECCTTCT
T ss_pred EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCC--CCCCCCccccccc--cCCCCCC
Confidence 99999975531 112234788999999999999999998 899999998877544 2345566654321 1112235
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC------CCcHHHHHH-HHhcCcccccc--ccCcCcee
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL------AGSVRGTLA-MVMGNREEYSM--LLNISMVH 231 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~------~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~ 231 (243)
.+.|+.+|.++|.+++.++++ |++++++||+++|||+..... ...+..+.. ...+....+.+ ++.++++|
T Consensus 169 ~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 247 (372)
T 3slg_A 169 RWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTY 247 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEE
T ss_pred CCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEE
Confidence 668999999999999999877 999999999999999865421 223444443 34455544443 67889999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 248 v~Dva~a~~~~ 258 (372)
T 3slg_A 248 VDDGISALMKI 258 (372)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998865
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=235.04 Aligned_cols=204 Identities=22% Similarity=0.253 Sum_probs=157.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|+ +||+|+||||||+||++++++|+++|++|++++| ++...... ..+++++.+|++|.+++.++++++|
T Consensus 1 M~-~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d 69 (227)
T 3dhn_A 1 ME-KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVR-HPEKIKIE---------NEHLKVKKADVSSLDEVCEVCKGAD 69 (227)
T ss_dssp ---CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECS-CGGGCCCC---------CTTEEEECCCTTCHHHHHHHHTTCS
T ss_pred CC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEc-Ccccchhc---------cCceEEEEecCCCHHHHHHHhcCCC
Confidence 55 3689999999999999999999999999999999 54322111 2489999999999999999999999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|||+|+.... + ...++.|+.++.++++++++.+ +++|||+||.++++..+. ...|+.+. .|
T Consensus 70 ~vi~~a~~~~~---~--~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~---~~~~~~~~---------~p 131 (227)
T 3dhn_A 70 AVISAFNPGWN---N--PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPG---LRLMDSGE---------VP 131 (227)
T ss_dssp EEEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETT---EEGGGTTC---------SC
T ss_pred EEEEeCcCCCC---C--hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCC---CccccCCc---------ch
Confidence 99999986422 1 2478889999999999999999 999999999887765532 11222221 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
.+.|+.+|.++|.+++.+++++|++++++||+.+||++...... ..+....+.....++++|++|+|++++
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~Dva~ai~ 202 (227)
T 3dhn_A 132 ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRY---------RLGKDDMIVDIVGNSHISVEDYAAAMI 202 (227)
T ss_dssp GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCC---------EEESSBCCCCTTSCCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccce---------eecCCCcccCCCCCcEEeHHHHHHHHH
Confidence 56799999999999999887789999999999999997543311 122333333333489999999999988
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 203 ~~ 204 (227)
T 3dhn_A 203 DE 204 (227)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-35 Score=242.24 Aligned_cols=223 Identities=17% Similarity=0.183 Sum_probs=167.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCch-hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPE-QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
|+. ||+|||||||||||++++++|+++ |++|++++|+... ....+..+ ...+++++.+|++|.+++.++++
T Consensus 1 Ms~-m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~ 74 (348)
T 1oc2_A 1 MSQ-FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-----LGDRVELVVGDIADAELVDKLAA 74 (348)
T ss_dssp --C-CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-----CSSSEEEEECCTTCHHHHHHHHT
T ss_pred CCc-CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-----ccCCeEEEECCCCCHHHHHHHhh
Confidence 543 679999999999999999999999 8999999994321 11111111 12478999999999999999999
Q ss_pred cccEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC----------cccccCC
Q 026091 78 GCTGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD----------VDMLDET 146 (243)
Q Consensus 78 ~~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~----------~~~~~e~ 146 (243)
++|+|||+|+..... ..+++...+++|+.++.+++++|++.+ + +|||+||.++|+..... ..+++|+
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~ 152 (348)
T 1oc2_A 75 KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE 152 (348)
T ss_dssp TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT
T ss_pred cCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCC
Confidence 999999999975421 112234789999999999999999998 6 99999999877543210 1355665
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccc--c
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYS--M 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~--~ 223 (243)
.+. .|.+.|+.+|.++|.+++.++.++|++++++||+.+|||..... ..+..+. ....+....+. +
T Consensus 153 ~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
T 1oc2_A 153 TNY---------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEG 221 (348)
T ss_dssp SCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEETTS
T ss_pred CCC---------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceEecCC
Confidence 542 24578999999999999999888899999999999999975422 2333333 33344443332 2
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.++++|++|+|++++++
T Consensus 222 ~~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 222 KNVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp CCEEECEEHHHHHHHHHHH
T ss_pred CceEeeEEHHHHHHHHHHH
Confidence 5678999999999998765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=238.94 Aligned_cols=215 Identities=16% Similarity=0.156 Sum_probs=165.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++|+.. .. . . +++++.+|++|.+++.+++++ +|+
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~-~------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~ 77 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-AK-L------P-----NVEMISLDIMDSQRVKKVISDIKPDY 77 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT-CC-C------T-----TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc-cc-c------c-----eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence 4689999999999999999999999999999999433 21 1 1 688999999999999999986 899
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+++...+++|+.++.+++++|++.+.+++|||+||.++|+.......+++|+.+.. |
T Consensus 78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~---------~ 148 (321)
T 2pk3_A 78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR---------P 148 (321)
T ss_dssp EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB---------C
T ss_pred EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC---------C
Confidence 9999997543 12234568999999999999999987622799999999987754321345677776532 5
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-h---c--Cccccc--cccCcCceeH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-M---G--NREEYS--MLLNISMVHI 232 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~---~--~~~~~~--~~~~~~~i~v 232 (243)
.+.|+.+|.++|.+++.+++++|++++++||+++|||+.... ..+..+.... . + ...... ++..++++|+
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v 226 (321)
T 2pk3_A 149 MSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV 226 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred CCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence 578999999999999999888899999999999999976532 2233333222 2 3 222222 2457899999
Q ss_pred HHHHHhhhcc
Q 026091 233 DDVARAHIFF 242 (243)
Q Consensus 233 ~Dva~a~~~~ 242 (243)
+|+|++++++
T Consensus 227 ~Dva~a~~~~ 236 (321)
T 2pk3_A 227 RDIVQAYWLL 236 (321)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998765
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=242.60 Aligned_cols=224 Identities=20% Similarity=0.133 Sum_probs=168.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++|+..........+. ...+++++.+|++|.+++.+++++ +|+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 35799999999999999999999999999999994432211111111 134789999999999999999986 899
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+.+...+++|+.++.+++++|++.+.+++|||+||.++|+... ...+++|+.+. .|
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~~~E~~~~---------~~ 153 (357)
T 1rkx_A 84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE-WIWGYRENEAM---------GG 153 (357)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC-SSSCBCTTSCB---------CC
T ss_pred EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC-cCCCCCCCCCC---------CC
Confidence 9999986332 1122345889999999999999999875478999999998775432 22345665432 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHc---------CccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccc-cccCcCc
Q 026091 161 GKSYKLSKTLAERAALEFAEEH---------GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYS-MLLNISM 229 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~---------gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 229 (243)
.+.|+.+|.++|.+++.++.++ |++++++||+.+|||+.... ...+..+.... .+....+. +++.+++
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 232 (357)
T 1rkx_A 154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPW 232 (357)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence 5779999999999999988764 99999999999999975322 23444444433 34443333 3567899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|++++.+
T Consensus 233 v~v~Dva~a~~~~ 245 (357)
T 1rkx_A 233 QHVLEPLSGYLLL 245 (357)
T ss_dssp EETHHHHHHHHHH
T ss_pred EeHHHHHHHHHHH
Confidence 9999999998764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=239.79 Aligned_cols=225 Identities=21% Similarity=0.235 Sum_probs=167.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch------hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE------QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
+|+|||||||||||++++++|+++|++|++++|+... .......+... .+.+++++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHHh
Confidence 5799999999999999999999999999999984322 11122222110 12478999999999999999998
Q ss_pred -cccEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhh
Q 026091 78 -GCTGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIR 155 (243)
Q Consensus 78 -~~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~ 155 (243)
++|+|||+|+..... ..+++...+++|+.++.++++++++.+ +++|||+||.++|+.. ...+++|+.+..
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~E~~~~~----- 151 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNP--QYLPLDEAHPTG----- 151 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSC--SSSSBCTTSCCC-----
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCC--CCCCcCCCCCCC-----
Confidence 799999999975421 112345889999999999999999988 8999999999876543 345677776532
Q ss_pred hcCCCCchHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCc--ccc---
Q 026091 156 KLDIWGKSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNR--EEY--- 221 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~--~~~--- 221 (243)
+..+.|+.+|.++|.+++.++++ .+++++++||+++|||..... ...++..+.....+.. ..+
T Consensus 152 ---p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (348)
T 1ek6_A 152 ---GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN 228 (348)
T ss_dssp ---CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred ---CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCC
Confidence 12567999999999999999877 239999999999999953111 1234555555544222 222
Q ss_pred -----ccccCcCceeHHHHHHhhhcc
Q 026091 222 -----SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 -----~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++.++++|++|+|++++.+
T Consensus 229 ~~~~~~g~~~~~~i~v~Dva~a~~~~ 254 (348)
T 1ek6_A 229 DYDTEDGTGVRDYIHVVDLAKGHIAA 254 (348)
T ss_dssp CSSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred cccCCCCceEEeeEEHHHHHHHHHHH
Confidence 125678999999999998764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=240.14 Aligned_cols=224 Identities=19% Similarity=0.205 Sum_probs=163.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC-chhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD-PEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
||+|||||||||||++++++|++.|++|++++|+. .........+.. ..+++++.+|++|.+++.+++++ +|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence 46899999999999999999999999999999832 111112222222 23689999999999999999998 999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEEecceeeecCCCCc--------------ccccC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVK-RVVYTSSASTVHFSGKDV--------------DMLDE 145 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~--------------~~~~e 145 (243)
|||+|+..... ..+++...+++|+.++.+++++|++.+ ++ +|||+||.++|+...... ..++|
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e 155 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE 155 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence 99999975421 112345889999999999999999998 75 999999998765432110 11233
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC-CcHHHHH-HHHhcC-----c
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA-GSVRGTL-AMVMGN-----R 218 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~-~~~~~~~-~~~~~~-----~ 218 (243)
+.+ ..|.+.|+.+|.++|.+++.++.++|++++++||+.+||+....... ..+..+. ....+. +
T Consensus 156 ~~~---------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (347)
T 1orr_A 156 STQ---------LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKP 226 (347)
T ss_dssp TSC---------CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCC
T ss_pred cCC---------CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCC
Confidence 322 12557899999999999999998889999999999999997543211 2233222 233333 2
Q ss_pred cccc--cccCcCceeHHHHHHhhhcc
Q 026091 219 EEYS--MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 219 ~~~~--~~~~~~~i~v~Dva~a~~~~ 242 (243)
.... +++.++++|++|+|++++++
T Consensus 227 ~~~~g~g~~~~~~i~v~Dva~a~~~~ 252 (347)
T 1orr_A 227 FTISGNGKQVRDVLHAEDMISLYFTA 252 (347)
T ss_dssp EEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred eEEecCCcceEeeEEHHHHHHHHHHH
Confidence 2222 35678999999999998765
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=243.86 Aligned_cols=224 Identities=18% Similarity=0.187 Sum_probs=162.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++|+|||||||||||++++++|+++| ++|++++|+....... +. ...+++++.+|++|.+.+.++++++|+|
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~----~~~~v~~~~~Dl~d~~~l~~~~~~~d~V 103 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP----DHPAVRFSETSITDDALLASLQDEYDYV 103 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC----CCTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc----CCCceEEEECCCCCHHHHHHHhhCCCEE
Confidence 45799999999999999999999999 9999999943321111 11 1347899999999999999999999999
Q ss_pred EEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCccccc--CCCCCchhhhhhcC
Q 026091 83 IHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLD--ETFWSDVDYIRKLD 158 (243)
Q Consensus 83 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~--e~~~~~~~~~~~~~ 158 (243)
||+|+..... ...++...+++|+.++.+++++|++. + +++|||+||.++|+.. ...+++ |+.+..+ ..
T Consensus 104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~--~~~~~~~~E~~~~~~-----~~ 175 (377)
T 2q1s_A 104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEK--TFDDAKATEETDIVS-----LH 175 (377)
T ss_dssp EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC----------------CCCCCCC-----SS
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCC--CCCCcCccccccccc-----cc
Confidence 9999975431 11234588999999999999999998 7 8999999999877543 223456 6653100 00
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCC---------CCC--CCCcHHHHHHH-HhcCccccc--cc
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFI---------CPQ--LAGSVRGTLAM-VMGNREEYS--ML 224 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~---------~~~--~~~~~~~~~~~-~~~~~~~~~--~~ 224 (243)
.|.+.|+.+|.++|.+++.+++++|++++++||+.+||+.. ... ....+..+... ..+....+. ++
T Consensus 176 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~ 255 (377)
T 2q1s_A 176 NNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGV 255 (377)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCC
Confidence 24577999999999999999888899999999999999976 210 02334444433 344443333 25
Q ss_pred cCcCceeHHHHHHh-hhcc
Q 026091 225 LNISMVHIDDVARA-HIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a-~~~~ 242 (243)
+.++++|++|+|++ ++.+
T Consensus 256 ~~~~~i~v~Dva~a~i~~~ 274 (377)
T 2q1s_A 256 ATRDFIFVEDVANGLIACA 274 (377)
T ss_dssp CEECCEEHHHHHHHHHHHH
T ss_pred eEEeeEEHHHHHHHHHHHH
Confidence 78899999999999 7754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=237.78 Aligned_cols=221 Identities=20% Similarity=0.229 Sum_probs=165.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCc-hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDP-EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+|+|||||||||||++++++|+++| ++|++++|+.. .....+..+. ...+++++.+|++|.+++.+++.++|+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 78 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE----DDPRYTFVKGDVADYELVKELVRKVDG 78 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT----TCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc----cCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence 4589999999999999999999996 89999999432 1111221111 135789999999999999999999999
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+.... ...+++...+++|+.++.+++++|++.+..++|||+||.++|+... ..+++|+.+. +|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~---------~~ 147 (336)
T 2hun_A 79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL--KGSFTENDRL---------MP 147 (336)
T ss_dssp EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS--SSCBCTTBCC---------CC
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC--CCCcCCCCCC---------CC
Confidence 9999997542 1112335789999999999999999987237999999998765432 3456776543 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccc--cccCcCceeHHHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYS--MLLNISMVHIDDVAR 237 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~Dva~ 237 (243)
.+.|+.+|.++|.+++.+++++|++++++||+.+|||.... ...+..+.. ...+....+. +.+.++++|++|+|+
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 225 (336)
T 2hun_A 148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR 225 (336)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence 57899999999999999998899999999999999997532 233343333 3344443332 255789999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+++++
T Consensus 226 ~~~~~ 230 (336)
T 2hun_A 226 AIELV 230 (336)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=237.89 Aligned_cols=223 Identities=18% Similarity=0.151 Sum_probs=167.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d 80 (243)
++++|||||||||||++++++|+++|++|++++|+..... ..+..+. ...+++++.+|++|.+++.+++++ +|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999433210 1111110 124789999999999999999986 69
Q ss_pred EEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 81 GVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTV-KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 81 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|||+|+..... ..+++...+++|+.++.+++++|++.+ + ++|||+||.++|+.. ...+++|+.+..
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~--~~~~~~E~~~~~-------- 157 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLI--QAERQDENTPFY-------- 157 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSC--SSSSBCTTSCCC--------
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCC--CCCCCCcccCCC--------
Confidence 999999975431 123445899999999999999999988 6 899999999877544 234667776543
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-CCcHHHHH-HHHhcCccc--cc-cccCcCceeHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-AGSVRGTL-AMVMGNREE--YS-MLLNISMVHID 233 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~-~~~~~~~~~--~~-~~~~~~~i~v~ 233 (243)
|.+.|+.+|.++|.+++.++++++++++++||+++|||+..... ...+..+. ....+.... +. +++.++++|++
T Consensus 158 -p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~ 236 (335)
T 1rpn_A 158 -PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 236 (335)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred -CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence 45679999999999999999888999999999999999754321 11122222 333444332 22 25678999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+|++++.+
T Consensus 237 Dva~a~~~~ 245 (335)
T 1rpn_A 237 DYVEAMWLM 245 (335)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=236.55 Aligned_cols=218 Identities=23% Similarity=0.273 Sum_probs=166.6
Q ss_pred eEEEecCchhhHHHHHHHHHHc---C---CeEEEEEeCCch-hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH---G---YSVRTTVRSDPE-QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
+|||||||||||++++++|+++ | ++|++++|+... ....+..+. ...+++++.+|++|.+++.+++.++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD----ADPRLRFVHGDIRDAGLLARELRGV 77 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT----TCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc----cCCCeEEEEcCCCCHHHHHHHhcCC
Confidence 7999999999999999999997 8 999999994321 111222111 1347899999999999999999999
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
|+|||+|+..... ..+++...+++|+.++.+++++|++.+ +++|||+||.++|+... ..+++|+.+.
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~--~~~~~E~~~~--------- 145 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSID--SGSWTESSPL--------- 145 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCS--SSCBCTTSCC---------
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCC--CCCCCCCCCC---------
Confidence 9999999975421 112234789999999999999999998 89999999998775432 3456776543
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccc--cccCcCceeHHHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYS--MLLNISMVHIDDV 235 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~Dv 235 (243)
.|.+.|+.+|.++|.+++.+++++|++++++||+++|||.... ...+..+.. ...+....+. +++.++++|++|+
T Consensus 146 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 223 (337)
T 1r6d_A 146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDH 223 (337)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHH
Confidence 2457899999999999999988889999999999999997542 233333333 3334443332 2556899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++.+
T Consensus 224 a~a~~~~ 230 (337)
T 1r6d_A 224 CRGIALV 230 (337)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=240.57 Aligned_cols=227 Identities=21% Similarity=0.231 Sum_probs=167.1
Q ss_pred CeEEEecCchhhHHHHHHHHH-HcCCeEEEEEeCCchh--------hchhhh-hhcCCCC--CCC---eEEEecCCCChh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLL-DHGYSVRTTVRSDPEQ--------KRDLSF-LTNLPRA--SER---LQIFNADLNNPE 70 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~--------~~~~~~-~~~~~~~--~~~---~~~~~~D~~d~~ 70 (243)
|+|||||||||||++++++|+ +.|++|++++|+.... ...+.. +...... ..+ ++++.+|++|.+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 489999999999999999999 9999999999943321 111111 1111110 124 899999999999
Q ss_pred hHHHHhc--c-ccEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC-----Ccc
Q 026091 71 SFDAAIA--G-CTGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK-----DVD 141 (243)
Q Consensus 71 ~~~~~~~--~-~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~-----~~~ 141 (243)
.+.++++ + +|+|||+|+..... ..+++...+++|+.++.+++++|++.+ +++|||+||.++|+.... ...
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccccc
Confidence 9999998 6 99999999975431 112345889999999999999999998 899999999887644321 135
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC-------CCCcHHHHH---
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTL--- 211 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~--- 211 (243)
+++|+.+.. |.+.|+.+|.++|.+++.+++++|++++++||+++|||..... ...++..+.
T Consensus 162 ~~~E~~~~~---------p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 232 (397)
T 1gy8_A 162 PIDINAKKS---------PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRV 232 (397)
T ss_dssp CBCTTSCCB---------CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHH
T ss_pred CcCccCCCC---------CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHH
Confidence 667776532 4578999999999999999988899999999999999964321 223444444
Q ss_pred --HHHhcCc------------ccc--------ccccCcCceeHHHHHHhhhcc
Q 026091 212 --AMVMGNR------------EEY--------SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 212 --~~~~~~~------------~~~--------~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+.. ..+ .+++.++++|++|+|++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~ 285 (397)
T 1gy8_A 233 MSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILA 285 (397)
T ss_dssp HHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHH
T ss_pred HHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHH
Confidence 3333332 212 125678999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=235.93 Aligned_cols=233 Identities=27% Similarity=0.379 Sum_probs=171.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh-hcCCCCCCCeEEE-ecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL-TNLPRASERLQIF-NADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++| +......+... ... .+.+++++ .+|++|.+.+.++++++|+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAK--YPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH--STTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CcccHHHHHHHhhcc--CCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 4579999999999999999999999999999999 54332222111 100 12478888 8999999999999999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHh-cCCccEEEEEecceeeecCCC--CcccccCCCCCchhhhh---
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLK-SGTVKRVVYTSSASTVHFSGK--DVDMLDETFWSDVDYIR--- 155 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~i~~Ss~~~~~~~~~--~~~~~~e~~~~~~~~~~--- 155 (243)
|||+|+..... .++...+++|+.++.+++++|++ .+ +++|||+||.++++.... ...+++|++|.+.....
T Consensus 87 vih~A~~~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 163 (342)
T 1y1p_A 87 VAHIASVVSFS--NKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp EEECCCCCSCC--SCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred EEEeCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence 99999976543 33458999999999999999985 56 899999999987643321 12567888765422110
Q ss_pred ----hcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCC-cHHHHH-HHHhcCcccccc-ccC
Q 026091 156 ----KLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAG-SVRGTL-AMVMGNREEYSM-LLN 226 (243)
Q Consensus 156 ----~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~ 226 (243)
....|.+.|+.+|.++|.+++.+++++ +++++++||+++||+........ .+..+. ....+....+.. .+.
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1y1p_A 164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP 243 (342)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCc
Confidence 011244679999999999999998775 79999999999999976543222 344333 333444433222 356
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
++++|++|+|++++.+
T Consensus 244 ~~~v~v~Dva~a~~~~ 259 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGC 259 (342)
T ss_dssp EEEEEHHHHHHHHHHH
T ss_pred CCEeEHHHHHHHHHHH
Confidence 7999999999998764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=235.76 Aligned_cols=216 Identities=26% Similarity=0.314 Sum_probs=163.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 84 (243)
+|||||||||||++++++|+++|++|++++|........ + ..+++++.+|++|.+++.++++ ++|+|||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN---V------PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG---S------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh---c------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999999999999998833221111 1 1367889999999999999998 7999999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc-eeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA-STVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~-~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
+|+.... ...+++...+++|+.++.+++++|++.+ +++||++||. ++|+... ...+++|+.+. .|.+
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~-~~~~~~E~~~~---------~~~~ 141 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVP-EGERAEETWPP---------RPKS 141 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCC-TTCCBCTTSCC---------CCCS
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCC-CCCCcCCCCCC---------CCCC
Confidence 9986542 1112345789999999999999999988 8999999998 6553311 23456666543 2456
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-CCcHHHHHH-HHhcCccccc-----c--ccCcCceeHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-AGSVRGTLA-MVMGNREEYS-----M--LLNISMVHID 233 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~~-~~~~~~~~~~-----~--~~~~~~i~v~ 233 (243)
.|+.+|.++|.+++.+++++|++++++||+++|||+..... ...+..+.. ...+.+..+. + .+.++++|++
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 221 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG 221 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence 79999999999999998888999999999999999765432 122333333 3334443322 2 4568999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+|++++++
T Consensus 222 Dva~a~~~~ 230 (311)
T 2p5y_A 222 DVAEAHALA 230 (311)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=242.00 Aligned_cols=232 Identities=14% Similarity=0.118 Sum_probs=166.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-----------------hhhhhhcCCCCCCCeEEEecCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-----------------DLSFLTNLPRASERLQIFNADL 66 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~D~ 66 (243)
++++|||||||||||++++++|+++|++|++++| ...... .+..+... ...+++++.+|+
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~~~Dl 86 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN-LVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDI 86 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe-cCccccccccccccccccchhhhhhhhHhhc--cCCceEEEECCC
Confidence 4689999999999999999999999999999998 432210 11111000 124789999999
Q ss_pred CChhhHHHHhcc--ccEEEEeeeccCC--CCCChH--HHHHHHHHHHHHHHHHHHHhcCCc-cEEEEEecceeeecCCCC
Q 026091 67 NNPESFDAAIAG--CTGVIHVAAPIDI--HGKEPE--EVIIQRAVSGTIGILKSCLKSGTV-KRVVYTSSASTVHFSGKD 139 (243)
Q Consensus 67 ~d~~~~~~~~~~--~d~vi~~a~~~~~--~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~~~~~~~~~ 139 (243)
+|.+++.+++++ +|+|||+||.... ...++. ...+++|+.++.+++++|++.+ + ++|||+||.++|+...
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~-- 163 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPN-- 163 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCS--
T ss_pred CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCC--
Confidence 999999999987 9999999997543 112222 3478999999999999999988 6 5999999998764332
Q ss_pred cccccCCCCCchhh-----hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC------------
Q 026091 140 VDMLDETFWSDVDY-----IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ------------ 202 (243)
Q Consensus 140 ~~~~~e~~~~~~~~-----~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~------------ 202 (243)
.+++|+.+.+.+. ......|.+.|+.+|.++|.+++.+++++|++++++||+.+|||+....
T Consensus 164 -~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~ 242 (404)
T 1i24_A 164 -IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242 (404)
T ss_dssp -SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred -CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence 3456653321110 0011235678999999999999999888899999999999999975321
Q ss_pred ---CCCcHHHHH-HHHhcCcccccc--ccCcCceeHHHHHHhhhcc
Q 026091 203 ---LAGSVRGTL-AMVMGNREEYSM--LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 203 ---~~~~~~~~~-~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~ 242 (243)
....+..+. ....+....+.+ ++.++++|++|+|++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 288 (404)
T 1i24_A 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIA 288 (404)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHH
Confidence 022334333 334454443332 5678999999999998765
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=234.89 Aligned_cols=223 Identities=19% Similarity=0.242 Sum_probs=165.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi 83 (243)
|+|||||||||||++++++|+++ |++|++++|+.. .... +. ...+++++.+|++|. +.+.++++++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~---~~----~~~~~~~~~~D~~~~~~~~~~~~~~~d~vi 72 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-AISR---FL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVL 72 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG-GGGG---GT----TCTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcc-hHHH---hh----cCCCeEEEeccccCcHHHHHhhccCCCEEE
Confidence 47999999999999999999998 899999999433 2211 11 124789999999984 67888999999999
Q ss_pred EeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+..... ...+....+++|+.++.+++++|++.+ ++|||+||.++|+... ..+++|+.+... ..+...|.+
T Consensus 73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~--~~~~~e~~~~~~--~~~~~~~~~ 146 (345)
T 2bll_A 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCS--DKYFDEDHSNLI--VGPVNKPRW 146 (345)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCC--CSSBCTTTCCCB--CCCTTCGGG
T ss_pred EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCC--CCCcCCcccccc--cCcccCccc
Confidence 999875431 112345789999999999999999887 7999999998775432 345677664311 011123456
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC------CCcHHHHH-HHHhcCccccc--cccCcCceeHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL------AGSVRGTL-AMVMGNREEYS--MLLNISMVHID 233 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~------~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~v~ 233 (243)
.|+.+|.++|.+++.+++++|++++++||+.+|||+..... ...+..+. ....+....+. +++.++++|++
T Consensus 147 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 226 (345)
T 2bll_A 147 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 226 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHH
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHH
Confidence 89999999999999998888999999999999999754321 11233333 34445544333 25678999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+|++++.+
T Consensus 227 Dva~a~~~~ 235 (345)
T 2bll_A 227 DGIEALYRI 235 (345)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=235.91 Aligned_cols=220 Identities=19% Similarity=0.210 Sum_probs=165.3
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCc-hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDP-EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
+|||||||||||++++++|++. |++|++++|+.. .....+..+. ...+++++.+|++|.+++.++++ ++|+|
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS----ESNRYNFEHADICDSAEITRIFEQYQPDAV 77 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT----TCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh----cCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 6999999999999999999998 799999999432 1122221111 13478999999999999999998 89999
Q ss_pred EEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhc--CCcc-------EEEEEecceeeecCCCCcc--------ccc
Q 026091 83 IHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVK-------RVVYTSSASTVHFSGKDVD--------MLD 144 (243)
Q Consensus 83 i~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-------~~i~~Ss~~~~~~~~~~~~--------~~~ 144 (243)
||+|+.... ...+++...+++|+.++.+++++|++. + ++ +|||+||.++|+....... +++
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~ 156 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence 999997542 111234578999999999999999998 7 76 9999999987654321111 456
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccc-
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYS- 222 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~- 222 (243)
|+.+. +|.+.|+.+|.++|.+++.++.++|++++++||+.+|||.... ...+..+. ....+....+.
T Consensus 157 E~~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1kew_A 157 ETTAY---------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYG 225 (361)
T ss_dssp TTSCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEET
T ss_pred CCCCC---------CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--ccHHHHHHHHHHcCCCceEcC
Confidence 65532 2557899999999999999998889999999999999997542 22333333 33344443332
Q ss_pred -cccCcCceeHHHHHHhhhcc
Q 026091 223 -MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 -~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.+.++++|++|+|++++++
T Consensus 226 ~~~~~~~~i~v~Dva~a~~~~ 246 (361)
T 1kew_A 226 KGDQIRDWLYVEDHARALHMV 246 (361)
T ss_dssp TSCCEEEEEEHHHHHHHHHHH
T ss_pred CCceeEeeEEHHHHHHHHHHH
Confidence 24568999999999998765
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=226.69 Aligned_cols=168 Identities=22% Similarity=0.297 Sum_probs=144.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||+||||||||+||++++++|+++|++|++++|+.. ... ..+++++.+|++|.+++.++++++|+|||
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~-~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 70 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL-DPA-----------GPNEECVQCDLADANAVNAMVAGCDGIVH 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC-CCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc-ccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 689999999999999999999999999999999433 211 34789999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+||... .+++...+++|+.++.++++++++.+ +++||++||.++++..+ ...+++|+.+. +|.+.|
T Consensus 71 ~Ag~~~---~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~-~~~~~~e~~~~---------~~~~~Y 136 (267)
T 3rft_A 71 LGGISV---EKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYP-QTERLGPDVPA---------RPDGLY 136 (267)
T ss_dssp CCSCCS---CCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSB-TTSCBCTTSCC---------CCCSHH
T ss_pred CCCCcC---cCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCC-CCCCCCCCCCC---------CCCChH
Confidence 999843 35677899999999999999999998 89999999998775433 34456676543 255789
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
+.+|.++|.+++.+++++|++++++||+.++|+.
T Consensus 137 ~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~ 170 (267)
T 3rft_A 137 GVSKCFGENLARMYFDKFGQETALVRIGSCTPEP 170 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCC
Confidence 9999999999999998999999999999999974
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=232.64 Aligned_cols=212 Identities=20% Similarity=0.198 Sum_probs=160.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
+||+|||||||||||++++++|+++|+ + ... . ...++++.+|++|.+.+.+++++ +|+
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~-~~~---~----------~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG------L-PGE---D----------WVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC------C-TTC---E----------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC------c-ccc---c----------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence 578999999999999999999999998 2 110 0 11445668999999999999987 999
Q ss_pred EEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 82 VIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 82 vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|||+|+.... ...++....+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+++.. .+..+
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~----~~~~p 137 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDK--TTYPIDETMIHN----GPPHN 137 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSS--CCSSBCGGGGGB----SCCCS
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCC--CCCCcccccccc----CCCCC
Confidence 9999998542 1223345889999999999999999999 9999999999877543 345667765321 01112
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHH-----HHhcCccccc--cccCcCce
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLA-----MVMGNREEYS--MLLNISMV 230 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~-----~~~~~~~~~~--~~~~~~~i 230 (243)
...+|+.+|.++|.+++.+++++|++++++||+++|||+..... ...+..+.. ...+....+. +++.++++
T Consensus 138 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 217 (319)
T 4b8w_A 138 SNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFI 217 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEE
T ss_pred CcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEE
Confidence 22369999999999999999889999999999999999765432 223333333 2344444433 35678999
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
|++|+|++++.+
T Consensus 218 ~v~Dva~a~~~~ 229 (319)
T 4b8w_A 218 YSLDLAQLFIWV 229 (319)
T ss_dssp EHHHHHHHHHHH
T ss_pred eHHHHHHHHHHH
Confidence 999999998765
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=232.02 Aligned_cols=211 Identities=18% Similarity=0.202 Sum_probs=162.8
Q ss_pred eEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
+|||||||||||++++++|+++ |++|++++|+... . .+++++.+|++|.+++.++++ ++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v 66 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD-T-------------GGIKFITLDVSNRDEIDRAVEKYSIDAI 66 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCC-C-------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcc-c-------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence 5999999999999999999998 8999999994331 1 146789999999999999998 89999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+|+.......++....+++|+.++.+++++|++.+ +++|||+||.++|.... ...+.+|+.+. .|.+
T Consensus 67 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~---------~p~~ 135 (317)
T 3ajr_A 67 FHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPET-PKNKVPSITIT---------RPRT 135 (317)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTS-CSSSBCSSSCC---------CCCS
T ss_pred EECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCC-CCCCccccccC---------CCCc
Confidence 9999875431122345889999999999999999998 89999999998775432 22345555432 2567
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC---CCcHHHHHHHHhcCcccc--ccccCcCceeHHHHHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL---AGSVRGTLAMVMGNREEY--SMLLNISMVHIDDVAR 237 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~ 237 (243)
.|+.+|.++|.+++.+++++|++++++||+++||+...+.. ......+.....+..... ..++.++++|++|+|+
T Consensus 136 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 215 (317)
T 3ajr_A 136 MFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALK 215 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHH
Confidence 89999999999999998888999999999999998643221 122333444444443322 2366889999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+++.+
T Consensus 216 a~~~~ 220 (317)
T 3ajr_A 216 ALVDL 220 (317)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=231.44 Aligned_cols=223 Identities=19% Similarity=0.233 Sum_probs=163.2
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~ 84 (243)
+|||||||||||++++++|+++|++|++++|...........+... .+.+++++.+|++|.+++.++++ ++|+|||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh--cCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 7999999999999999999999999999987332211222222111 02367899999999999999987 4899999
Q ss_pred eeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+||..... ..+.....+++|+.++.++++++++.+ +++|||+||.++|+.. ...+++|+.+.. ++.+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~~--------~~~~~ 148 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDN--PKIPYVESFPTG--------TPQSP 148 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--CSSSBCTTSCCC--------CCSSH
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCC--CCCCcCcccCCC--------CCCCh
Confidence 99865321 112234789999999999999999988 8999999998876433 234566665421 23567
Q ss_pred HHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCccc--c--------ccc
Q 026091 164 YKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREE--Y--------SML 224 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~--~--------~~~ 224 (243)
|+.+|.++|.+++.++.++ +++++++||+++||+..... ...++..+.....+.... . .+.
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 228 (338)
T 1udb_A 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence 9999999999999998776 89999999999999843111 123445554444432211 1 124
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
+.+++||++|+|++++.+
T Consensus 229 ~~~~~i~v~Dva~a~~~~ 246 (338)
T 1udb_A 229 GVRDYIHVMDLADGHVVA 246 (338)
T ss_dssp CEECEEEHHHHHHHHHHH
T ss_pred eeeeeEEHHHHHHHHHHH
Confidence 568999999999998754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=234.90 Aligned_cols=226 Identities=19% Similarity=0.167 Sum_probs=165.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhcCCC--CCCCeEEEecCCCChhhHHHHhcc--c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTNLPR--ASERLQIFNADLNNPESFDAAIAG--C 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~--~ 79 (243)
||+|||||||||||++++++|+++|++|++++|+.... ...+..+..... ...+++++.+|++|.+++.+++++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 37899999999999999999999999999999943321 111111110000 134789999999999999999986 6
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEEecceeeecCCCCcccccCCCCCchhhhh
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTV---KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIR 155 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~ 155 (243)
|+|||+||..... ..+++...+++|+.++.++++++++.+ + ++|||+||.++|.... ..+++|+.+..
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~--~~~~~E~~~~~----- 175 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQ--EIPQKETTPFY----- 175 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCS--SSSBCTTSCCC-----
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCC--CCCCCccCCCC-----
Confidence 9999999975431 112345789999999999999999988 7 7999999998775432 34667776432
Q ss_pred hcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-CCcHHH-HHHHHhcCccc--cc-cccCcCce
Q 026091 156 KLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-AGSVRG-TLAMVMGNREE--YS-MLLNISMV 230 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-~~~~~~-~~~~~~~~~~~--~~-~~~~~~~i 230 (243)
|.+.|+.+|.++|.+++.++++++++++++||+++|||+..... ...+.. +.....+.... +. +++.++++
T Consensus 176 ----~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i 251 (375)
T 1t2a_A 176 ----PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG 251 (375)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeE
Confidence 45679999999999999999888999999999999999754321 111222 22333443322 22 25678999
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
|++|+|++++.+
T Consensus 252 ~v~Dva~a~~~~ 263 (375)
T 1t2a_A 252 HAKDYVEAMWLM 263 (375)
T ss_dssp EHHHHHHHHHHH
T ss_pred EHHHHHHHHHHH
Confidence 999999998765
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=233.99 Aligned_cols=210 Identities=22% Similarity=0.155 Sum_probs=157.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch---hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE---QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
++|+|||||||||||++++++|+++|++|++++|+... ....+..+. ...+++++.+|+. ++|
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~----------~~d 71 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL----EKPVLELEERDLS----------DVR 71 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE----CSCGGGCCHHHHT----------TEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc----cCCCeeEEeCccc----------cCC
Confidence 47899999999999999999999999999999994431 111111110 1235666667765 789
Q ss_pred EEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 81 GVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 81 ~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|||+|+.... ...++ ...++ |+.++.+++++|++.+ +++|||+||.++|... ...+++|+.+..
T Consensus 72 ~vi~~a~~~~~~~~~~~~-~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~--~~~~~~E~~~~~-------- 138 (321)
T 3vps_A 72 LVYHLASHKSVPRSFKQP-LDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQA--DTLPTPEDSPLS-------- 138 (321)
T ss_dssp EEEECCCCCCHHHHTTST-TTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCCC--------
T ss_pred EEEECCccCChHHHHhCH-HHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCC--CCCCCCCCCCCC--------
Confidence 99999997653 12232 25566 9999999999999999 9999999999877554 345677776543
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCc-cEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCccccc--cccCcCceeHHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGL-DLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYS--MLLNISMVHIDD 234 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi-~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~v~D 234 (243)
|.+.|+.+|.++|.+++.+++++|+ +++++||+.+|||+... ...+..+... ..+....+. +++.++++|++|
T Consensus 139 -p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 215 (321)
T 3vps_A 139 -PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYITD 215 (321)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHH
T ss_pred -CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHH
Confidence 5578999999999999999988899 99999999999997654 2334444433 344443333 356789999999
Q ss_pred HHHhhhccC
Q 026091 235 VARAHIFFT 243 (243)
Q Consensus 235 va~a~~~~~ 243 (243)
+|++++.++
T Consensus 216 va~~~~~~~ 224 (321)
T 3vps_A 216 VVDKLVALA 224 (321)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHH
Confidence 999998763
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=230.50 Aligned_cols=227 Identities=17% Similarity=0.162 Sum_probs=165.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhcc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIAG--CT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d 80 (243)
||+|||||||||||++++++|+++|++|++++|+.... ...+..+.. ......+++++.+|++|.+++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999943321 111111110 000134789999999999999999986 69
Q ss_pred EEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 81 GVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTV---KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 81 ~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
+|||+|+.... ...+++...+++|+.++.++++++++.+ + ++|||+||.++|+.. ...+++|+.+..
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~--~~~~~~E~~~~~------ 151 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLV--QEIPQKETTPFY------ 151 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTC--CSSSBCTTSCCC------
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCC--CCCCCCccCCCC------
Confidence 99999997553 2234456889999999999999999988 7 799999999876443 234567776532
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-CCcHHHHH-HHHhcCccc-c-c-cccCcCcee
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-AGSVRGTL-AMVMGNREE-Y-S-MLLNISMVH 231 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~-~~~~~~~~~-~-~-~~~~~~~i~ 231 (243)
|.+.|+.+|.++|.+++.++++++++++++|++++|||+..... ...+..+. ....+.... . . +++.++++|
T Consensus 152 ---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 228 (372)
T 1db3_A 152 ---PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH 228 (372)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred ---CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence 45679999999999999999889999999999999999754321 11122222 233343322 2 2 266789999
Q ss_pred HHHHHHhhhccC
Q 026091 232 IDDVARAHIFFT 243 (243)
Q Consensus 232 v~Dva~a~~~~~ 243 (243)
++|+|++++.++
T Consensus 229 v~Dva~a~~~~~ 240 (372)
T 1db3_A 229 AKDYVKMQWMML 240 (372)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 999999998653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=229.37 Aligned_cols=223 Identities=15% Similarity=0.090 Sum_probs=166.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~v 82 (243)
+|+|||||||||||++++++|+++|++|++++|+.. .... ..+.... ...+++++.+|++|.+++.+++++ +|+|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG-EFAS-WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS-TTTT-HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc-cccc-ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 579999999999999999999999999999999433 2111 1111111 124789999999999999999986 5999
Q ss_pred EEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTV-KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
||+||.... ...+++...+++|+.++.+++++|++.+ + ++|||+||.++|+.. ...+++|+.+. .|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~--~~~~~~e~~~~---------~~ 147 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKV--QEIPQTEKTPF---------YP 147 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSC--SSSSBCTTSCC---------CC
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCC--CCCCCCccCCC---------CC
Confidence 999997543 1234456899999999999999999888 6 899999999876543 23456676543 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-CCcHHH-HHHHHhcCccc-cc--cccCcCceeHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-AGSVRG-TLAMVMGNREE-YS--MLLNISMVHIDDV 235 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-~~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~Dv 235 (243)
.+.|+.+|.++|.+++.++.+++++++++|++++|||+..... ...+.. +.....+.... +. +.+.++++|++|+
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv 227 (345)
T 2z1m_A 148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEY 227 (345)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHH
Confidence 5679999999999999999888999999999999999754321 111111 22223333222 22 2457789999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|++++++
T Consensus 228 a~a~~~~ 234 (345)
T 2z1m_A 228 VEAMWLM 234 (345)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998865
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=241.35 Aligned_cols=232 Identities=19% Similarity=0.209 Sum_probs=167.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc---CCeEEEEEeCCchhhchhhhhhcCCC-------------CCCCeEEEecCCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH---GYSVRTTVRSDPEQKRDLSFLTNLPR-------------ASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 67 (243)
++|+|||||||||||++++++|++. |++|++++|+.. .......+..... ...+++++.+|++
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES-DEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS-HHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC-cHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 4789999999999999999999999 899999999443 2222222221111 1358999999998
Q ss_pred ------ChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcc
Q 026091 68 ------NPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 68 ------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
|.+.+.++++++|+|||+||.... .++.+.+++|+.++.+++++|++.+ +++|||+||.++|... ...
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~--~~~ 224 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAI--EPS 224 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSB---SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTS--CTT
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCC---cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCcc--CCC
Confidence 667899999999999999998765 2334778999999999999999998 8999999998876443 234
Q ss_pred cccCCCCCchhhh--hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCC---CCCCcHHHHHHHHh-
Q 026091 142 MLDETFWSDVDYI--RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICP---QLAGSVRGTLAMVM- 215 (243)
Q Consensus 142 ~~~e~~~~~~~~~--~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~---~~~~~~~~~~~~~~- 215 (243)
+++|+.+..+... .......+.|+.+|.++|.+++.+++++|++++++||++|||+.... ....++..+.....
T Consensus 225 ~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~ 304 (478)
T 4dqv_A 225 AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMA 304 (478)
T ss_dssp TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHH
T ss_pred CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHH
Confidence 5666654322100 00011235699999999999999988889999999999999985422 12233433333222
Q ss_pred -cCcc-ccc--------cccCcCceeHHHHHHhhhcc
Q 026091 216 -GNRE-EYS--------MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 -~~~~-~~~--------~~~~~~~i~v~Dva~a~~~~ 242 (243)
+..+ .+. .++.++++|++|+|++++.+
T Consensus 305 ~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~ 341 (478)
T 4dqv_A 305 TGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVL 341 (478)
T ss_dssp HCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHH
T ss_pred cCcccccccccccccccccceeeeeeHHHHHHHHHHH
Confidence 2211 111 14568999999999998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-32 Score=224.57 Aligned_cols=211 Identities=21% Similarity=0.246 Sum_probs=158.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
+.|+|||||||||||++++++|+++|++|++++|+........ ... .+++++.+|++|.+++.++++ ++|+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL---PPV----AGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS---CSC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh---hcc----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 4579999999999999999999999999999999433211111 111 478999999999999999999 8999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+||.......+++ . +++|+.++.++++++++.+ +++|||+||.++|........+++|+. .+.
T Consensus 92 vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-----------~~~ 157 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-----------APF 157 (330)
T ss_dssp EEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-----------CCC
T ss_pred EEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-----------CCC
Confidence 9999997654222333 4 8999999999999999988 899999999987643321111566654 144
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHH-hh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVAR-AH 239 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~-a~ 239 (243)
+.|+.+|.++|.+++.+ +++++++||+++|||+.. ..++..+..........+. .. .++++|++|+|+ ++
T Consensus 158 ~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 158 TSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA---IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIAD 229 (330)
T ss_dssp SHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHH
Confidence 67999999999998875 899999999999999741 2333333333322222222 13 679999999999 98
Q ss_pred hccC
Q 026091 240 IFFT 243 (243)
Q Consensus 240 ~~~~ 243 (243)
++++
T Consensus 230 ~~~~ 233 (330)
T 2pzm_A 230 LSLQ 233 (330)
T ss_dssp HHTS
T ss_pred HHHh
Confidence 8763
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=229.98 Aligned_cols=194 Identities=18% Similarity=0.098 Sum_probs=151.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-ccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-CTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi 83 (243)
+|+||||| +||||++++++|+++|++|++++|+.. .. ..+++++.+|++|.+.+.+++++ +|+||
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~-~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 68 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQ-PM------------PAGVQTLIADVTRPDTLASIVHLRPEILV 68 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTS-CC------------CTTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcc-cc------------ccCCceEEccCCChHHHHHhhcCCCCEEE
Confidence 67999999 599999999999999999999999433 21 24789999999999999999987 99999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+|+.... + ....+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+.+.. |.+.
T Consensus 69 h~a~~~~~---~-~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~---------p~~~ 132 (286)
T 3gpi_A 69 YCVAASEY---S-DEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQE--VEEWLDEDTPPI---------AKDF 132 (286)
T ss_dssp ECHHHHHH---C------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCC--CSSEECTTSCCC---------CCSH
T ss_pred EeCCCCCC---C-HHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCC--CCCCCCCCCCCC---------CCCh
Confidence 99987442 2 24778899999999999999988 9999999999877544 345677776543 5578
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+ +.+ ++++++||+++||+... .+............++..++++|++|+|++++.+
T Consensus 133 Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 197 (286)
T 3gpi_A 133 SGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL--------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYL 197 (286)
T ss_dssp HHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC--------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch--------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHH
Confidence 99999999998 552 99999999999999754 1222222211112236678999999999998765
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=227.92 Aligned_cols=222 Identities=18% Similarity=0.264 Sum_probs=163.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|||||||||||++++++|+++|++|++++|+..........+. ...+++++.+|+.+.. +.++|+||
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~-----~~~~d~vi 96 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI----GHENFELINHDVVEPL-----YIEVDQIY 96 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT----TCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc----cCCceEEEeCccCChh-----hcCCCEEE
Confidence 46899999999999999999999999999999994332221221111 1347899999998763 56899999
Q ss_pred EeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+..... ...+....+++|+.++.+++++|++.+ + +|||+||.++|+.. ...+++|+.|..... ..|.+
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~~~~~----~~~~~ 168 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVNP----IGPRA 168 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCCS----SSTTH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCC--CCCCCcccccccCCC----CCCCC
Confidence 999975431 123345889999999999999999998 5 99999998876543 234567765432111 12456
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccc--cccCcCceeHHHHHHhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYS--MLLNISMVHIDDVARAH 239 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~v~Dva~a~ 239 (243)
.|+.+|.++|.+++.+++++|++++++||+.+|||.........+..+. ....+....+. +++.++++|++|+|+++
T Consensus 169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 248 (343)
T 2b69_A 169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence 7999999999999999888899999999999999975443233333333 33444444333 25678999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+.+
T Consensus 249 ~~~ 251 (343)
T 2b69_A 249 VAL 251 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=231.46 Aligned_cols=214 Identities=19% Similarity=0.214 Sum_probs=162.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----G 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~ 78 (243)
+|+|||||||||||++++++|+++| ++|++++|+.. .. ....+. ++. +.+|++|.+.+.++++ +
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~-~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GT-KFVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS-GG-GGGGTT-------TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC-cc-hhhccc-------Cce-EeeecCcHHHHHHHHhhcccCC
Confidence 4789999999999999999999999 99999999433 21 111111 223 7889999999999987 5
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|||+|+..... .+++...+++|+.++.+++++|++.+ + +|||+||.++|+.. ...+++|+.+.
T Consensus 116 ~d~Vih~A~~~~~~-~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~--~~~~~~E~~~~--------- 181 (357)
T 2x6t_A 116 VEAIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE--------- 181 (357)
T ss_dssp CCEEEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSC--SSCCCSSGGGC---------
T ss_pred CCEEEECCcccCCc-cCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCC--CCCCcCCcCCC---------
Confidence 99999999976552 34456899999999999999999999 7 99999999876443 23356776543
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHHHHH-hcCccccc--ccc-CcCceeH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTLAMV-MGNREEYS--MLL-NISMVHI 232 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~~~-~~~~~~~~--~~~-~~~~i~v 232 (243)
.|.+.|+.+|.++|.+++.+++++|++++++||+++|||+.... ....+..+.... .+....+. +.. .++++|+
T Consensus 182 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 261 (357)
T 2x6t_A 182 KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV 261 (357)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEH
Confidence 24577999999999999999888899999999999999975432 123344444333 34433332 245 7799999
Q ss_pred HHHHHhhhcc
Q 026091 233 DDVARAHIFF 242 (243)
Q Consensus 233 ~Dva~a~~~~ 242 (243)
+|+|++++.+
T Consensus 262 ~Dva~ai~~~ 271 (357)
T 2x6t_A 262 GDVADVNLWF 271 (357)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998765
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=227.56 Aligned_cols=212 Identities=20% Similarity=0.234 Sum_probs=158.2
Q ss_pred eEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----cc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-----CT 80 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~d 80 (243)
+|||||||||||++++++|+++| ++|++++|+.... ....+. +++ +.+|++|.+.+.+++++ +|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT--KFVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG--GGHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCc--hhhhcC-------cce-eccccccHHHHHHHHhccccCCCc
Confidence 59999999999999999999999 9999999943321 111111 223 78899999999999975 99
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|||+|+..... ..+....+++|+.++.+++++|++.+ + +|||+||.++|+.. ...+++|+.+. .|
T Consensus 71 ~vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~---------~p 136 (310)
T 1eq2_A 71 AIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE---------KP 136 (310)
T ss_dssp EEEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTC--CSCBCSSGGGC---------CC
T ss_pred EEEECcccccCc-ccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCC--CCCCCCCCCCC---------CC
Confidence 999999976553 34456899999999999999999999 7 99999999876443 22356676532 24
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHHHHH-hcCccccc--ccc-CcCceeHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTLAMV-MGNREEYS--MLL-NISMVHIDD 234 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~~~-~~~~~~~~--~~~-~~~~i~v~D 234 (243)
.+.|+.+|.++|.+++.+++++|++++++||+++|||+.... ....+..+.... .+....+. +.+ .++++|++|
T Consensus 137 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D 216 (310)
T 1eq2_A 137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (310)
T ss_dssp SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence 578999999999999999888899999999999999975421 123344444433 33333332 245 789999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 217 va~~~~~~ 224 (310)
T 1eq2_A 217 VADVNLWF 224 (310)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=225.28 Aligned_cols=193 Identities=17% Similarity=0.123 Sum_probs=155.6
Q ss_pred CC-eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 5 KG-RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 5 ~k-~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
|| +|||||||||||++++++|+++|++|++++| . ++|+.|.+.+.++++ ++|+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~D~~d~~~~~~~~~~~~~d~ 59 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK-K-----------------------LLDITNISQVQQVVQEIRPHI 59 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT-T-----------------------TSCTTCHHHHHHHHHHHCCSE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc-c-----------------------ccCCCCHHHHHHHHHhcCCCE
Confidence 45 9999999999999999999999999999999 1 269999999999998 6999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+..... ..+++...+++|+.++.+++++|++.+ + +|||+||.++|... ...+++|+++.. |
T Consensus 60 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~~---------p 126 (287)
T 3sc6_A 60 IIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGD--RPEGYDEFHNPA---------P 126 (287)
T ss_dssp EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCC--CSSCBCTTSCCC---------C
T ss_pred EEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCC--CCCCCCCCCCCC---------C
Confidence 99999976541 123456899999999999999999999 6 79999999877544 335678877543 5
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccccccCcCceeHHHHHHhh
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSMLLNISMVHIDDVARAH 239 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~ 239 (243)
.+.|+.+|.++|.+++.++ .+++++||+.+|||... .++..+..... +......+++.++++|++|+|+++
T Consensus 127 ~~~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 198 (287)
T 3sc6_A 127 INIYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN----NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMI 198 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC----cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence 6789999999999998864 47899999999998643 23444444443 444444557888999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+++
T Consensus 199 ~~~ 201 (287)
T 3sc6_A 199 NKL 201 (287)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=223.84 Aligned_cols=190 Identities=21% Similarity=0.251 Sum_probs=155.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||+||||||||+||++++++|+++|++|++++|+.. .. . ..+++++.+|++|.+.+.++++++|+|||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~--~---------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 69 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL-GA--A---------EAHEEIVACDLADAQAVHDLVKDCDGIIH 69 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC-CC--C---------CTTEEECCCCTTCHHHHHHHHTTCSEEEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc-cc--c---------CCCccEEEccCCCHHHHHHHHcCCCEEEE
Confidence 679999999999999999999999999999999433 11 0 13679999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+|+... .+++...+++|+.++.++++++++.+ +++|||+||.+++...+ ...+++|+.+.. |.+.|
T Consensus 70 ~a~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~-~~~~~~E~~~~~---------~~~~Y 135 (267)
T 3ay3_A 70 LGGVSV---ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYP-RTTRIDTEVPRR---------PDSLY 135 (267)
T ss_dssp CCSCCS---CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSB-TTSCBCTTSCCC---------CCSHH
T ss_pred CCcCCC---CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCC-CCCCCCCCCCCC---------CCChH
Confidence 999752 24556899999999999999999988 89999999998775432 235677776532 45679
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.+|.++|.+++.++.++|++++++||+.+|+.. . . ....++++|++|+|++++.+
T Consensus 136 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~---~--------------~-----~~~~~~~~~~~dva~~~~~~ 191 (267)
T 3ay3_A 136 GLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP---K--------------D-----ARMMATWLSVDDFMRLMKRA 191 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSC---C--------------S-----HHHHHHBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCC---C--------------C-----CCeeeccccHHHHHHHHHHH
Confidence 9999999999999888889999999999999531 0 0 01123789999999998764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=227.10 Aligned_cols=208 Identities=16% Similarity=0.160 Sum_probs=158.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
+|+|||||||||||++++++|+++|++|+++.| +. .+|+.|.+++.++++ ++|+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r-~~----------------------~~D~~d~~~~~~~~~~~~~d~v 59 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-RD----------------------ELNLLDSRAVHDFFASERIDQV 59 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC-TT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEec-Cc----------------------cCCccCHHHHHHHHHhcCCCEE
Confidence 578999999999999999999999999998887 32 269999999999998 89999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
||+|+.... ....+....+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+++... +..|.
T Consensus 60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~~----~~~p~ 132 (321)
T 1e6u_A 60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKL--AKQPMAESELLQG----TLEPT 132 (321)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTT--CCSSBCGGGTTSS----CCCGG
T ss_pred EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCC--CCCCcCccccccC----CCCCC
Confidence 999997542 1112335789999999999999999998 8999999999877543 2345667653210 11112
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHh-----c-Cccccc--cccCcCce
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVM-----G-NREEYS--MLLNISMV 230 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~i 230 (243)
.+.|+.+|.++|.+++.++++++++++++||+.+|||+..... ..++..+..... + .+..+. +++.++++
T Consensus 133 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i 212 (321)
T 1e6u_A 133 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 212 (321)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeE
Confidence 3579999999999999998888999999999999999765321 133333333321 2 233222 35678999
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
|++|+|++++.+
T Consensus 213 ~v~Dva~~~~~~ 224 (321)
T 1e6u_A 213 HVDDMAAASIHV 224 (321)
T ss_dssp EHHHHHHHHHHH
T ss_pred EHHHHHHHHHHH
Confidence 999999998764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-32 Score=223.33 Aligned_cols=210 Identities=21% Similarity=0.202 Sum_probs=156.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
+||+|||||||||||++++++|+++|++|++++|+.......+ .. ..+++++.+|++|.+++.+++++ +|+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l---~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL---KD----HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS---CC----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhH---hh----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 4689999999999999999999999999999999433211111 11 14789999999999999999988 999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCC-CCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSG-KDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+|+........++ + +++|+.++.+++++|++.+ +++|||+||.++|...+ ....+++|+. .|
T Consensus 93 vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~-----------~p 158 (333)
T 2q1w_A 93 VVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR-----------NP 158 (333)
T ss_dssp EEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC-----------CC
T ss_pred EEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC-----------CC
Confidence 9999997654222233 4 9999999999999999988 89999999988764111 1111566664 13
Q ss_pred C-chHHhhHHHHHHHHHH-HHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHh
Q 026091 161 G-KSYKLSKTLAERAALE-FAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238 (243)
Q Consensus 161 ~-~~y~~sK~~~e~~~~~-~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 238 (243)
. +.|+.+|.++|.+++. ++ +++++||+++|||+.. ...+..+..........+..++.++++|++|+|++
T Consensus 159 ~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 230 (333)
T 2q1w_A 159 ANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARA 230 (333)
T ss_dssp TTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHH
Confidence 4 6799999999999987 64 7999999999999721 23344444333222222223567899999999999
Q ss_pred hhcc
Q 026091 239 HIFF 242 (243)
Q Consensus 239 ~~~~ 242 (243)
++++
T Consensus 231 i~~~ 234 (333)
T 2q1w_A 231 TVRA 234 (333)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=226.31 Aligned_cols=202 Identities=17% Similarity=0.123 Sum_probs=132.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~v 82 (243)
+|+|||||||||||++++++|+++|++|++++|+.. . .+ ++.+|++|.+++.+++++ +|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA-R--------------PK--FEQVNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC-C--------------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence 579999999999999999999999999999998332 1 12 778999999999999985 8999
Q ss_pred EEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 83 IHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 83 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||+|+..... ..+++...+++|+.++.++++++++.+ + +|||+||.++|.. ...+++|+.+.. |.
T Consensus 65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~---~~~~~~E~~~~~---------~~ 130 (315)
T 2ydy_A 65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG---TNPPYREEDIPA---------PL 130 (315)
T ss_dssp EECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS---SSCSBCTTSCCC---------CC
T ss_pred EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC---CCCCCCCCCCCC---------Cc
Confidence 9999975532 234456889999999999999999998 6 9999999987654 235677776532 45
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH--hcCccccccccCcCceeHHHHHHhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV--MGNREEYSMLLNISMVHIDDVARAH 239 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~a~ 239 (243)
+.|+.+|.++|.+++.+ +++++++||+.+||+...... .++..+.... .+.......++.++++|++|+|+++
T Consensus 131 ~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 205 (315)
T 2ydy_A 131 NLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEE-SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC 205 (315)
T ss_dssp SHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGG-STTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccc-cHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence 77999999999999885 578899999999999765211 1112222222 3333334446778999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+++
T Consensus 206 ~~~ 208 (315)
T 2ydy_A 206 RQL 208 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=234.61 Aligned_cols=227 Identities=18% Similarity=0.209 Sum_probs=161.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc----C------CCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN----L------PRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~------~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.+|+|||||||||||++++++|++.|++|++++|+.. .......+.. . .....+++++.+|++|.+.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN-EEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS-HHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC-hHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 3579999999999999999999999999999999443 1111111110 0 001358999999999988888
Q ss_pred HHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEeccee--eecCCCCcccccCCCCCch
Q 026091 74 AAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAST--VHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~--~~~~~~~~~~~~e~~~~~~ 151 (243)
.+.++|+|||+||..... .++...+++|+.++.+++++|++ + +++|||+||.++ +........+++|+++..+
T Consensus 147 -~~~~~d~Vih~A~~~~~~--~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~ 221 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKG 221 (427)
T ss_dssp -CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSS
T ss_pred -CcCCCCEEEECCcccCCC--CCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccC
Confidence 777899999999986532 34558899999999999999999 5 799999999887 1112223456777765321
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC-----CcHHHHHHHH-hcCccccc-cc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA-----GSVRGTLAMV-MGNREEYS-ML 224 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~-----~~~~~~~~~~-~~~~~~~~-~~ 224 (243)
..+.+.|+.+|.++|.+++.++ +.|++++++||++|||+....... ..+..+.+.. ........ ++
T Consensus 222 ------~~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (427)
T 4f6c_A 222 ------QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE 294 (427)
T ss_dssp ------CCCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred ------CCCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence 1256789999999999999976 479999999999999997655421 1233333333 33332222 37
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
+.++++|++|+|++++.++
T Consensus 295 ~~~~~v~v~DvA~ai~~~~ 313 (427)
T 4f6c_A 295 MPVDFSFVDTTARQIVALA 313 (427)
T ss_dssp CEECCEEHHHHHHHHHHHT
T ss_pred ceEEEeeHHHHHHHHHHHH
Confidence 7889999999999998753
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=230.13 Aligned_cols=224 Identities=17% Similarity=0.142 Sum_probs=164.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhc-CCCCCC-CeEEEecCCCChhhHHHHhcc--cc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTN-LPRASE-RLQIFNADLNNPESFDAAIAG--CT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~-~~~~~~~D~~d~~~~~~~~~~--~d 80 (243)
|+|||||||||||++++++|++.|++|++++|+.... ...+..+.. ....+. +++++.+|++|.+++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999999943321 011111110 000122 789999999999999999986 69
Q ss_pred EEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCcc-----EEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 81 GVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVK-----RVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 81 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
+|||+|+..... ..+++...+++|+.++.+++++|++.+ ++ +|||+||.++|+... . +++|+.+.
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~--~-~~~E~~~~----- 179 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTP--P-PQSETTPF----- 179 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSC--S-SBCTTSCC-----
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCC--C-CCCCCCCC-----
Confidence 999999975431 112345789999999999999999987 66 999999998775442 2 67777643
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC-CcHHH-HHHHHhcCccc--cc-cccCcCc
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA-GSVRG-TLAMVMGNREE--YS-MLLNISM 229 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~-~~~~~-~~~~~~~~~~~--~~-~~~~~~~ 229 (243)
.|.+.|+.+|.++|.+++.++.+++++++++|++++|||+...... ..+.. +.....+.... +. +++.+++
T Consensus 180 ----~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 180 ----HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp ----CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence 2457899999999999999998889999999999999997543211 11122 22233343322 22 2567899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|++++++
T Consensus 256 v~v~Dva~a~~~~ 268 (381)
T 1n7h_A 256 GFAGDYVEAMWLM 268 (381)
T ss_dssp EEHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHH
Confidence 9999999998765
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=224.78 Aligned_cols=194 Identities=15% Similarity=0.034 Sum_probs=154.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~ 84 (243)
+|||||||||||++++++|+ +|++|++++| +. +++.+|+.|.+++.+++++ +|+|||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r-~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDV-HS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECT-TC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEecc-cc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 79999999999999999999 8999999999 33 1357899999999999986 999999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.... ....++...++.|+.++.+++++|++.+ + +|||+||.++|+.. ...+++|+.+.. |.+.
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~~---------p~~~ 127 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGT--GDIPWQETDATS---------PLNV 127 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCC--TTCCBCTTSCCC---------CSSH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCC--CCCCCCCCCCCC---------CccH
Confidence 9997543 1223445899999999999999999988 6 89999999877554 234667776532 4578
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+++.++ .+++++||+++||++.. .++..+.... .+......+++.++++|++|+|++++.+
T Consensus 128 Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 199 (299)
T 1n2s_A 128 YGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHA 199 (299)
T ss_dssp HHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHH
Confidence 9999999999998864 38999999999999753 2344344333 3444444456788999999999998765
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=225.57 Aligned_cols=219 Identities=17% Similarity=0.130 Sum_probs=164.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-------CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-------YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
++|+|||||||||||++++++|+++| ++|++++|+..... . ....+++++.+|++|.+++.+++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-~--------~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-A--------GFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-T--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-c--------ccCCceeEEEcCCCCHHHHHHHH
Confidence 46799999999999999999999999 89999999433111 1 01346899999999999999999
Q ss_pred c-cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 77 A-GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG----TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 77 ~-~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+ ++|+|||+|+.......+++...+++|+.++.+++++|++.+ .+++|||+||.++|... ...+++|+.+..
T Consensus 84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--~~~~~~E~~~~~- 160 (342)
T 2hrz_A 84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP--LPYPIPDEFHTT- 160 (342)
T ss_dssp HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS--CCSSBCTTCCCC-
T ss_pred hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC--CCCCcCCCCCCC-
Confidence 5 899999999975432123456889999999999999998864 36899999999876543 234677776543
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeC-CCCCCCC-CCcHHHHHH-HHhcCcccccc--ccC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG-PFICPQL-AGSVRGTLA-MVMGNREEYSM--LLN 226 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~--~~~ 226 (243)
|.+.|+.+|.++|.+++.++++++++.+++|++.+|| |+..... ..++..+.. ...+....+.. +..
T Consensus 161 --------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T 2hrz_A 161 --------PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232 (342)
T ss_dssp --------CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred --------CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence 4567999999999999999888899999999999999 6532221 123333333 33344332222 345
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
++++|++|+|++++.+
T Consensus 233 ~~~~~v~Dva~~~~~~ 248 (342)
T 2hrz_A 233 HWHASPRSAVGFLIHG 248 (342)
T ss_dssp EEEECHHHHHHHHHHH
T ss_pred eeeEehHHHHHHHHHH
Confidence 6789999999998764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=226.66 Aligned_cols=203 Identities=17% Similarity=0.234 Sum_probs=157.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+||||||||+||++++++|++. |+ +|++++| ++.....+... . ...+++++.+|++|.+.+.++++++|+
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r-~~~~~~~~~~~--~--~~~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR-DELKQSEMAME--F--NDPRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES-CHHHHHHHHHH--H--CCTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC-ChhhHHHHHHH--h--cCCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 3589999999999999999999999 97 9999999 54332222111 1 124799999999999999999999999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+||..... ......+.+++|+.++.+++++|++.+ +++||++||..++. |
T Consensus 95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~-------------------------p 148 (344)
T 2gn4_A 95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN-------------------------P 148 (344)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS-------------------------C
T ss_pred EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC-------------------------C
Confidence 99999975421 112234899999999999999999999 99999999965321 2
Q ss_pred CchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcC-ccccc-cccCcCceeHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGN-REEYS-MLLNISMVHIDD 234 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~~i~v~D 234 (243)
.+.|+.+|.++|.+++.++.+ +|++++++|||++||+.. ..++.+.+.. .+. +..+. +...++|+|++|
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D 223 (344)
T 2gn4_A 149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDE 223 (344)
T ss_dssp CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHH
Confidence 356999999999999998753 589999999999999863 2344444443 333 33332 355678999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 224 ~a~~v~~~ 231 (344)
T 2gn4_A 224 GVSFVLKS 231 (344)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=243.87 Aligned_cols=227 Identities=17% Similarity=0.197 Sum_probs=166.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
++|+|||||||||||++++++|+++|++|++++|+..........+... ...+++++.+|++|.+++.++++ ++|+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc--cCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 4589999999999999999999999999999999433221111111111 12468899999999999999998 7999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC--CcccccCCCCCchhhhhhcC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK--DVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~ 158 (243)
|||+|+..... ..+...+.+++|+.++.+++++|++.+ +++|||+||.++|+.... ...+++|..+.
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~--------- 157 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL--------- 157 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC---------
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCC---------
Confidence 99999975421 111234789999999999999999998 899999999987643311 12345665542
Q ss_pred CCCchHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcC--cccc-----
Q 026091 159 IWGKSYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGN--REEY----- 221 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~--~~~~----- 221 (243)
.|.+.|+.+|.++|.+++.++.+ ++++++++||+.+||+..... ...++..+.....+. +..+
T Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (699)
T 1z45_A 158 GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDY 237 (699)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC----
T ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcc
Confidence 24567999999999999998877 799999999999999864321 123344444444432 2222
Q ss_pred ---ccccCcCceeHHHHHHhhhcc
Q 026091 222 ---SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ---~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+.+++||++|+|++++.+
T Consensus 238 ~~~~g~~~~~~i~v~Dva~a~~~a 261 (699)
T 1z45_A 238 DSRDGTPIRDYIHVVDLAKGHIAA 261 (699)
T ss_dssp --CCSSCEECEEEHHHHHHHHHHH
T ss_pred cCCCCCeeEeeEEHHHHHHHHHHH
Confidence 135678999999999998754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=239.66 Aligned_cols=225 Identities=18% Similarity=0.250 Sum_probs=168.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh-HHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES-FDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~ 81 (243)
++|+|||||||||||++++++|+++ |++|++++|+.. .... +. ...+++++.+|++|.++ +.++++++|+
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~-~~~~---~~----~~~~v~~v~~Dl~d~~~~~~~~~~~~D~ 385 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-AISR---FL----NHPHFHFVEGDISIHSEWIEYHVKKCDV 385 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCT-TTGG---GT----TCTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCch-hhhh---hc----cCCceEEEECCCCCcHHHHHHhhcCCCE
Confidence 4679999999999999999999998 899999999433 2211 11 13478999999999865 7788899999
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|||+||..... ...+....+++|+.++.+++++|++.+ ++|||+||.++|+.. ...+++|+++... ..+...|
T Consensus 386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~--~~~~~~E~~~~~~--~~p~~~p 459 (660)
T 1z7e_A 386 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMC--SDKYFDEDHSNLI--VGPVNKP 459 (660)
T ss_dssp EEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTC--CSSSBCTTTCCEE--ECCTTCT
T ss_pred EEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCC--CCcccCCCccccc--cCcccCC
Confidence 99999975531 112345789999999999999999987 899999999877543 2345677765321 0111235
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC------CCCcHHHHH-HHHhcCccccc--cccCcCcee
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ------LAGSVRGTL-AMVMGNREEYS--MLLNISMVH 231 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~------~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~ 231 (243)
.+.|+.+|.++|.+++.+++++|++++++||+++||++.... ....+..+. ....+....+. +++.++++|
T Consensus 460 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 460 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 568999999999999999888899999999999999975421 122333333 33444444333 256789999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+|++++.+
T Consensus 540 v~Dva~ai~~~ 550 (660)
T 1z7e_A 540 IRDGIEALYRI 550 (660)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.3e-32 Score=217.93 Aligned_cols=189 Identities=19% Similarity=0.153 Sum_probs=145.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|||+|||||| ||||++++++|+++|++|++++| ++.....+ .. .+++++.+|+.|.+ ++++|+||
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---~~-----~~~~~~~~D~~d~~-----~~~~d~vi 68 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSR-NPDQMEAI---RA-----SGAEPLLWPGEEPS-----LDGVTHLL 68 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEES-CGGGHHHH---HH-----TTEEEEESSSSCCC-----CTTCCEEE
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEc-ChhhhhhH---hh-----CCCeEEEecccccc-----cCCCCEEE
Confidence 4689999998 99999999999999999999999 54332222 11 37899999999965 78899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLK--SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+|+..... ++ .+.++++++++ .+ +++|||+||.++|+.. ...+++|+.+.. |.
T Consensus 69 ~~a~~~~~~--~~----------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~~---------p~ 124 (286)
T 3ius_A 69 ISTAPDSGG--DP----------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDH--DGAWVDETTPLT---------PT 124 (286)
T ss_dssp ECCCCBTTB--CH----------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCC--TTCEECTTSCCC---------CC
T ss_pred ECCCccccc--cH----------HHHHHHHHHHhhcCC-ceEEEEeecceecCCC--CCCCcCCCCCCC---------CC
Confidence 999975442 22 24688899988 56 8999999999877543 344677877543 55
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~ 240 (243)
+.|+.+|.++|.+++.+ ++++++++||+++||++.... . ....+....+. .++.++++|++|+|++++
T Consensus 125 ~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~-~-------~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 193 (286)
T 3ius_A 125 AARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF-S-------KLGKGGIRRIIKPGQVFSRIHVEDIAQVLA 193 (286)
T ss_dssp SHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS-T-------TSSSSCCCEEECTTCCBCEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH-H-------HHhcCCccccCCCCcccceEEHHHHHHHHH
Confidence 78999999999999886 699999999999999975432 1 11223333333 256789999999999988
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 194 ~~ 195 (286)
T 3ius_A 194 AS 195 (286)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=5e-32 Score=236.18 Aligned_cols=227 Identities=19% Similarity=0.222 Sum_probs=163.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc----------CCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN----------LPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.+|+|||||||||||++++++|.+.|++|++++|+... ......+.. ......+++++.+|+.|.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNE-EIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSH-HHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCCh-HHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 35799999999999999999998889999999995442 111111100 0011358999999999988887
Q ss_pred HHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEeccee--eecCCCCcccccCCCCCch
Q 026091 74 AAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAST--VHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~--~~~~~~~~~~~~e~~~~~~ 151 (243)
+..++|+|||+|+..... .+....++.|+.++.+++++|++ + .++|||+||.++ +........+++|+++...
T Consensus 228 -~~~~~D~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~ 302 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKG 302 (508)
T ss_dssp -CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSS
T ss_pred -CccCCCEEEECCceecCC--CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccccccc
Confidence 777899999999976532 33457889999999999999998 5 699999999987 2222223456777765321
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC-----CCcHHHHHHHHhcCc-cccc-cc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL-----AGSVRGTLAMVMGNR-EEYS-ML 224 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~-----~~~~~~~~~~~~~~~-~~~~-~~ 224 (243)
..+.+.|+.+|.++|.+++.++ +.|++++++||+.+||+...... ...+..+.+...... .+.. ++
T Consensus 303 ------~~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~ 375 (508)
T 4f6l_B 303 ------QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE 375 (508)
T ss_dssp ------BCCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGG
T ss_pred ------ccCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccC
Confidence 1256789999999999999975 47999999999999999765442 122444444433322 2222 37
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
+.++|+|++|+|++++.++
T Consensus 376 ~~~~~v~v~DvA~ai~~~~ 394 (508)
T 4f6l_B 376 MPVDFSFVDTTARQIVALA 394 (508)
T ss_dssp SEEECEEHHHHHHHHHHHT
T ss_pred ceEEEEcHHHHHHHHHHHH
Confidence 7889999999999998753
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=212.00 Aligned_cols=182 Identities=20% Similarity=0.220 Sum_probs=146.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC-hhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN-PESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ 85 (243)
+|+||||||+||++++++|+++|++|++++| ++...... .+++++++|++| .+++.++++++|+|||+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEES-SGGGSCCC----------TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-Cccchhhc----------CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 7999999999999999999999999999999 54322111 489999999999 99999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+.... ..+++|+.++.++++++++.+ +++||++||.+++... +..| .+ ..|.+.|+
T Consensus 71 ag~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-----~~~e-~~---------~~~~~~Y~ 127 (219)
T 3dqp_A 71 SGSGGK-------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPE-----KWIG-AG---------FDALKDYY 127 (219)
T ss_dssp CCCTTS-------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGG-----GCCS-HH---------HHHTHHHH
T ss_pred CcCCCC-------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCC-----cccc-cc---------cccccHHH
Confidence 997552 357789999999999999999 9999999997654322 2233 11 12346799
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|.++|.+++ +.+|++++++||+.+||+....... ..+..+++++++|+|++++++
T Consensus 128 ~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~-----------------~~~~~~~~i~~~Dva~~i~~~ 184 (219)
T 3dqp_A 128 IAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLID-----------------INDEVSASNTIGDVADTIKEL 184 (219)
T ss_dssp HHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE-----------------ESSSCCCCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCccc-----------------cCCCcCCcccHHHHHHHHHHH
Confidence 99999999986 4679999999999999985432211 114566999999999998865
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=209.38 Aligned_cols=188 Identities=23% Similarity=0.254 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCe-EEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL-QIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++|+|+||||||+||++++++|+++|++|++++| +++.... +.. .++ +++.+|++ +.+.+.++++|+|
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R-~~~~~~~---~~~-----~~~~~~~~~Dl~--~~~~~~~~~~D~v 88 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPE---LRE-----RGASDIVVANLE--EDFSHAFASIDAV 88 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SGGGHHH---HHH-----TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC-ChHHHHH---HHh-----CCCceEEEcccH--HHHHHHHcCCCEE
Confidence 4689999999999999999999999999999999 5533322 221 278 99999999 7888889999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+||.... +++...+++|+.++.++++++++.+ +++||++||.+.... +..+ ++.+
T Consensus 89 i~~ag~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~---------~~~~----------~~~~ 145 (236)
T 3e8x_A 89 VFAAGSGPH---TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP---------DQGP----------MNMR 145 (236)
T ss_dssp EECCCCCTT---SCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG---------GGSC----------GGGH
T ss_pred EECCCCCCC---CCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC---------CCCh----------hhhh
Confidence 999997543 4466899999999999999999999 999999999543211 1111 1346
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.|+.+|.++|.+++ ++|++++++||+.++|+........ .....+.++++|++|+|++++++
T Consensus 146 ~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~--------------~~~~~~~~~~i~~~Dva~~~~~~ 207 (236)
T 3e8x_A 146 HYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV--------------SPHFSEITRSITRHDVAKVIAEL 207 (236)
T ss_dssp HHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE--------------ESSCSCCCCCEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe--------------ccCCCcccCcEeHHHHHHHHHHH
Confidence 79999999999886 5799999999999999854322100 00113356999999999999876
Q ss_pred C
Q 026091 243 T 243 (243)
Q Consensus 243 ~ 243 (243)
+
T Consensus 208 ~ 208 (236)
T 3e8x_A 208 V 208 (236)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=216.99 Aligned_cols=192 Identities=14% Similarity=0.092 Sum_probs=152.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
.++|||||||||||++++++|+++|++|++++| + .+|++|.+++.++++ ++|+|
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDV-Q-----------------------DLDITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT-T-----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccC-c-----------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence 479999999999999999999999999999998 2 269999999999998 79999
Q ss_pred EEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 83 IHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 83 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||+|+..... ..+++...+++|+.++.+++++|++.+ + +|||+||.++|... ...+++|+.+.. |.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~--~~~~~~E~~~~~---------~~ 134 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGE--AKEPITEFDEVN---------PQ 134 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSC--CSSCBCTTSCCC---------CC
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCC--CCCCCCCCCCCC---------Cc
Confidence 9999975421 113345889999999999999999999 7 99999999877543 234677776532 45
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccccccCcCceeHHHHHHhhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
+.|+.+|.++|.+++.++ .+++++||+.+||+ .. .++..+.... .+......+++.++++|++|+|++++
T Consensus 135 ~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 205 (292)
T 1vl0_A 135 SAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL 205 (292)
T ss_dssp SHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc----ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHH
Confidence 679999999999998853 47999999999999 22 2333333333 34443344467789999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
++
T Consensus 206 ~~ 207 (292)
T 1vl0_A 206 KV 207 (292)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=206.61 Aligned_cols=197 Identities=15% Similarity=0.050 Sum_probs=145.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEee
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 86 (243)
+||||||||+||++++++|+++|++|++++| ++.....+ . ..+++++.+|++|.++ +.++++|+|||+|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~---~-----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKAADR---L-----GATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH---T-----CTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe-cccccccc---c-----CCCceEEecccccccH--hhcccCCEEEECC
Confidence 6999999999999999999999999999999 55333221 1 2478999999999988 7888999999999
Q ss_pred eccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCc-ccccCCCCCchhhhhhcCCCCchHH
Q 026091 87 APIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDV-DMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 87 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|..... ...+.|+.++.++++++++.+ ++||++||.++++..+... .+.+|..++ .|.+.|+
T Consensus 71 g~~~~~------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~---------~~~~~y~ 133 (224)
T 3h2s_A 71 SVPWGS------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESA---------ASQPWYD 133 (224)
T ss_dssp CCCTTS------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGG---------GGSTTHH
T ss_pred ccCCCc------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCC---------ccchhhH
Confidence 986221 124679999999999999988 8999999987665543221 223333221 1356799
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|...|. ++.+.++++++++++||+.+||++.... +. .+..........++++|++|+|++++.+
T Consensus 134 ~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~ 199 (224)
T 3h2s_A 134 GALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS---YV-------AGKDTLLVGEDGQSHITTGNMALAILDQ 199 (224)
T ss_dssp HHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC---EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC---ce-------ecccccccCCCCCceEeHHHHHHHHHHH
Confidence 99999994 4555556799999999999999843221 10 1111111234567899999999998865
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=215.80 Aligned_cols=210 Identities=16% Similarity=0.100 Sum_probs=158.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-----CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-----YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|+|||||||||||++++++|+++| ++|++++|+.. ... + ...+++++.+|++|.+++.+++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~-~~~----~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR-PAW----H-----EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC-CSC----C-----CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC-ccc----c-----ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 689999999999999999999999 99999999433 211 1 134789999999999999999998
Q ss_pred -ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEE-------EEecceeeecCCCCcccccCCCC
Q 026091 79 -CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVV-------YTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 -~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i-------~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|+|||+|+... .+....++.|+.++.+++++|++. + ++++| |+||.++|+.......+++|+.+
T Consensus 72 ~~d~vih~a~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~ 146 (364)
T 2v6g_A 72 DVTHVFYVTWANR----STEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP 146 (364)
T ss_dssp TCCEEEECCCCCC----SSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred CCCEEEECCCCCc----chHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence 999999999753 234589999999999999999998 6 88998 79998876544223456777765
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC-ccEEEEccCceeCCCCCCCCCCcHHH-HHHHH---hcCcccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG-LDLVTIIPSFVTGPFICPQLAGSVRG-TLAMV---MGNREEYSM 223 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g-i~~~~~rp~~i~G~~~~~~~~~~~~~-~~~~~---~~~~~~~~~ 223 (243)
.. ++.+.| ..+|.++++++++++ ++++++||+.+|||+........... +...+ .+....+.+
T Consensus 147 ~~--------~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 214 (364)
T 2v6g_A 147 RL--------KYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTG 214 (364)
T ss_dssp CC--------SSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCS
T ss_pred CC--------ccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCC
Confidence 32 123557 357999998887677 99999999999999765432322222 23333 344433332
Q ss_pred -----ccCcCceeHHHHHHhhhcc
Q 026091 224 -----LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 -----~~~~~~i~v~Dva~a~~~~ 242 (243)
....+++|++|+|++++.+
T Consensus 215 ~~~~~~~~~~~~~v~Dva~a~~~~ 238 (364)
T 2v6g_A 215 CKAAWDGYSDCSDADLIAEHHIWA 238 (364)
T ss_dssp CHHHHHSCBCCEEHHHHHHHHHHH
T ss_pred CcccccccCCCCcHHHHHHHHHHH
Confidence 2357889999999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=202.89 Aligned_cols=196 Identities=14% Similarity=0.117 Sum_probs=131.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|+||||||+||++++++|+++|++|++++| +++.... +. .+++++.+|++|.++ +.++++|+|||+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~---~~------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGKITQ---TH------KDINILQKDIFDLTL--SDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CSHHHHH---HC------SSSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc-Cchhhhh---cc------CCCeEEeccccChhh--hhhcCCCEEEEC
Confidence 37999999999999999999999999999999 4433221 11 378999999999988 788899999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+.... ..+.|+.++.++++++++.+ ++++|++||.+++++.+. ..+..|+.+. .|.+.|+
T Consensus 69 ag~~~~--------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~-~~~~~~~~~~---------~~~~~y~ 129 (221)
T 3ew7_A 69 YGISPD--------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDED-GNTLLESKGL---------REAPYYP 129 (221)
T ss_dssp CCSSTT--------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----------------------------CCCSC
T ss_pred CcCCcc--------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCC-CccccccCCC---------CCHHHHH
Confidence 997432 14558999999999999998 899999999887765432 1223333321 1345699
Q ss_pred hhHHHHHHHHHHHHH-HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAE-EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~-~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+|...|.+ ..+.+ .+|++++++||+.+||++.... .+ . ..+....+. ....+++|++|+|++++.+
T Consensus 130 ~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~--~~-~-----~~~~~~~~~-~~~~~~i~~~Dva~~~~~~ 197 (221)
T 3ew7_A 130 TARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG--DY-Q-----IGKDHLLFG-SDGNSFISMEDYAIAVLDE 197 (221)
T ss_dssp CHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC--ce-E-----eccccceec-CCCCceEeHHHHHHHHHHH
Confidence 999999986 34443 6799999999999999832211 10 0 011111111 2223799999999998765
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=207.71 Aligned_cols=209 Identities=17% Similarity=0.111 Sum_probs=148.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+.++|+++||||+|+||++++++|+++|++|++++| +........ .. ...+++++.+|++|.+++.++++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR-RTEALDDLV--AA---YPDRAEAISLDVTDGERIDVVAADVL 74 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHH--HH---CTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hh---ccCCceEEEeeCCCHHHHHHHHHHHH
Confidence 6667899999999999999999999999999999999 443322221 11 13478999999999999988886
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGI----LKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.... .+.+++...+++|+.++.++ ++.+++.+ .++||++||.+++.+.
T Consensus 75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------- 145 (281)
T 3m1a_A 75 ARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF-------- 145 (281)
T ss_dssp HHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC--------
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC--------
Confidence 67999999996532 23345667899999995555 44556666 7899999997654332
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC-------CCCcHHHHHHHH
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMV 214 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~ 214 (243)
++.+.|+.+|.+.|.+.+.++.+ +|+++++++||.++++..... ............
T Consensus 146 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (281)
T 3m1a_A 146 --------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTR 211 (281)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHH
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHH
Confidence 13457999999999999999888 799999999999998864432 112222111110
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ........++.+++|+|++++++
T Consensus 212 ---~-~~~~~~~~~~~~~~dva~a~~~~ 235 (281)
T 3m1a_A 212 ---Q-LVQGSDGSQPGDPAKAAAAIRLA 235 (281)
T ss_dssp ---H-HHHC-----CBCHHHHHHHHHHH
T ss_pred ---H-HHhhccCCCCCCHHHHHHHHHHH
Confidence 0 00012223789999999998765
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=200.70 Aligned_cols=193 Identities=14% Similarity=0.067 Sum_probs=146.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+|+|+||||+|+||++++++|+++|+ +|++++|+ +....... ..+++++.+|++|.+++.++++++|+|
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~-~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~v 88 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR-KLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVG 88 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS-CCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC-CCCccccc--------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence 57999999999999999999999999 99999994 32221111 126789999999999999999999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+||..... ..+...+++|+.++.++++++++.+ +++||++||.+++.. +.+
T Consensus 89 i~~ag~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~------------------------~~~ 141 (242)
T 2bka_A 89 FCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------------------------SNF 141 (242)
T ss_dssp EECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------------------------CSS
T ss_pred EECCCccccc--CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC------------------------Ccc
Confidence 9999864331 2345789999999999999999988 899999999876421 124
Q ss_pred hHHhhHHHHHHHHHHHHHHcCc-cEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 163 SYKLSKTLAERAALEFAEEHGL-DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi-~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
.|+.+|.++|.+++. .++ +++++||+.+||+..... ....+.....+..+.. .....+++++|+|+++++
T Consensus 142 ~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~ 212 (242)
T 2bka_A 142 LYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDS--WASGHSVPVVTVVRAMLN 212 (242)
T ss_dssp HHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTT--GGGGTEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccCcc--ccCCcccCHHHHHHHHHH
Confidence 599999999998876 478 699999999999964321 1222222222221111 112368999999999987
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 213 ~ 213 (242)
T 2bka_A 213 N 213 (242)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=216.87 Aligned_cols=179 Identities=17% Similarity=0.184 Sum_probs=148.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
|+|||||||||||++++++|+++|+ +|++++|+ .|.+++.++++++|+|||
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~~~d~Vih 52 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALLKADFIVH 52 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhccCCEEEE
Confidence 3799999999999999999999998 77776661 688899999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK-RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+..... + ....++.|+.++.+++++|++.+ ++ +|||+||.+++. .+.
T Consensus 53 ~a~~~~~~--~-~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--------------------------~~~ 102 (369)
T 3st7_A 53 LAGVNRPE--H-DKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--------------------------DNP 102 (369)
T ss_dssp CCCSBCTT--C-STTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--------------------------CSH
T ss_pred CCcCCCCC--C-HHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--------------------------CCC
Confidence 99976542 2 23678899999999999999998 76 999999987653 145
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-hcCccccc-cccCcCceeHHHHHHhhhc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV-MGNREEYS-MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~v~Dva~a~~~ 241 (243)
|+.+|.++|.+++.+++++|++++++||+++||+...+.....+..+.... .+....+. +++.++++|++|+|++++.
T Consensus 103 Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 182 (369)
T 3st7_A 103 YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKR 182 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHH
Confidence 999999999999999988999999999999999987665555666655544 34433333 4677899999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 183 ~ 183 (369)
T 3st7_A 183 A 183 (369)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-31 Score=204.54 Aligned_cols=189 Identities=19% Similarity=0.118 Sum_probs=144.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
|+.++|+|+||||||+||++++++|+++|+ +|++++|+.. . ...+++++.+|++|.+++.+++
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~-~------------~~~~~~~~~~D~~~~~~~~~~~-- 65 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL-A------------EHPRLDNPVGPLAELLPQLDGS-- 65 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC-C------------CCTTEECCBSCHHHHGGGCCSC--
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCc-c------------cCCCceEEeccccCHHHHHHhh--
Confidence 555668999999999999999999999998 9999999433 2 0237889999999999988888
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|||+|+..... ..++...++.|+.++.++++++++.+ +++||++||.+++..
T Consensus 66 ~d~vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~----------------------- 120 (215)
T 2a35_A 66 IDTAFCCLGTTIKE-AGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------------- 120 (215)
T ss_dssp CSEEEECCCCCHHH-HSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-----------------------
T ss_pred hcEEEECeeecccc-CCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC-----------------------
Confidence 99999999875432 13456889999999999999999998 899999999876421
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCcc-EEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLD-LVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVAR 237 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~-~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 237 (243)
+.+.|+.+|.++|.+++. .|++ ++++||+.+||+..... +...+ .+....+ .++.++++|++|+|+
T Consensus 121 -~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~~~~----~~~~~~~-~~~~~~~i~~~Dva~ 187 (215)
T 2a35_A 121 -SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LAEIL----AAPIARI-LPGKYHGIEACDLAR 187 (215)
T ss_dssp -CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GGGGT----TCCCC-----CHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HHHHH----HHhhhhc-cCCCcCcEeHHHHHH
Confidence 225699999999998876 5899 99999999999965421 11111 1111111 123568999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
+++.+
T Consensus 188 ~~~~~ 192 (215)
T 2a35_A 188 ALWRL 192 (215)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=199.25 Aligned_cols=198 Identities=18% Similarity=0.177 Sum_probs=145.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|+||||+|+||++++++|+++ |++|++++| ++..... + ..+++++.+|++|.+++.++++++|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r-~~~~~~~---~------~~~~~~~~~D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEK---I------GGEADVFIGDITDADSINPAFQGIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES-CHHHHHH---T------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc-CCCchhh---c------CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence 4789999999999999999999999 899999999 5433221 1 23678999999999999999999999
Q ss_pred EEEeeeccCCC-----------C---CChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 82 VIHVAAPIDIH-----------G---KEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 82 vi~~a~~~~~~-----------~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
|||+|+..... . .+.+...+++|+.++.++++++++.+ +++||++||.+++... .
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~----------~ 141 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPD----------H 141 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTT----------C
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCC----------C
Confidence 99999864320 0 01112468999999999999999998 8999999998653111 1
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
+.. . ...+.|+.+|.++|.+++. +|++++++||+.+||+..... ..+ .+....+. ....
T Consensus 142 ~~~-~------~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~--~~~-------~~~~~~~~-~~~~ 200 (253)
T 1xq6_A 142 PLN-K------LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR--ELL-------VGKDDELL-QTDT 200 (253)
T ss_dssp GGG-G------GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS--CEE-------EESTTGGG-GSSC
T ss_pred ccc-c------ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh--hhh-------ccCCcCCc-CCCC
Confidence 000 0 0113488899999998764 799999999999999864321 100 11111111 2235
Q ss_pred CceeHHHHHHhhhccC
Q 026091 228 SMVHIDDVARAHIFFT 243 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~~ 243 (243)
+++|++|+|+++++++
T Consensus 201 ~~~~~~Dva~~~~~~~ 216 (253)
T 1xq6_A 201 KTVPRADVAEVCIQAL 216 (253)
T ss_dssp CEEEHHHHHHHHHHHT
T ss_pred cEEcHHHHHHHHHHHH
Confidence 7999999999988753
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=221.47 Aligned_cols=201 Identities=18% Similarity=0.120 Sum_probs=148.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+|||||||||||++++++|++.|++|++++|+.. .. ..+.+|+.+. +.++++++|+|||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~-~~----------------~~v~~d~~~~--~~~~l~~~D~Vih 207 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP-KP----------------GKRFWDPLNP--ASDLLDGADVLVH 207 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC-CT----------------TCEECCTTSC--CTTTTTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC-Cc----------------cceeecccch--hHHhcCCCCEEEE
Confidence 679999999999999999999999999999999433 11 1256777643 4566789999999
Q ss_pred eeeccCC--CCCChHHHHHHHHHHHHHHHHHH-HHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 85 VAAPIDI--HGKEPEEVIIQRAVSGTIGILKS-CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 85 ~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
+|+.... ...++....+++|+.++.+++++ +++.+ +++|||+||.++|+.. ....+++|+.+. +.
T Consensus 208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~-~~~~~~~E~~~~----------~~ 275 (516)
T 3oh8_A 208 LAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHD-RGDEILTEESES----------GD 275 (516)
T ss_dssp CCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSE-EEEEEECTTSCC----------CS
T ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCC-CCCCccCCCCCC----------Cc
Confidence 9997543 22345567899999999999999 55566 8999999999877522 134467777653 34
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccc-cccCcCceeHHHHHHhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYS-MLLNISMVHIDDVARAH 239 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~v~Dva~a~ 239 (243)
+.|+.+|...|.++.. +..+|++++++||+++||++. ..+..+..... +....+. +++.+++||++|+|+++
T Consensus 276 ~~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai 349 (516)
T 3oh8_A 276 DFLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY 349 (516)
T ss_dssp SHHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence 6699999999988765 456799999999999999963 22333333322 2222222 35678999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+.+
T Consensus 350 ~~~ 352 (516)
T 3oh8_A 350 YRA 352 (516)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=195.39 Aligned_cols=208 Identities=15% Similarity=0.204 Sum_probs=152.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +........ .... ...++.++.+|++|.+++.++++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKVC--NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-ChhHHHHHH--HHhC-CCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 443322211 1111 12378999999999999998886
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||..++.+.+
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------- 161 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE-------- 161 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT--------
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCC--------
Confidence 68999999996532 122456678999999999999988764 4 57999999987653321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
.+...|+.+|.+.|.+++.++.+ +|++++++|||.++|+....................+..
T Consensus 162 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (278)
T 2bgk_A 162 -------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL-- 226 (278)
T ss_dssp -------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS--
T ss_pred -------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccccc--
Confidence 02346999999999999999876 599999999999999975443221111111111111111
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+++++|+|++++++
T Consensus 227 ---~~~~~~~~dva~~~~~l 243 (278)
T 2bgk_A 227 ---KGTLLRAEDVADAVAYL 243 (278)
T ss_dssp ---CSCCCCHHHHHHHHHHH
T ss_pred ---ccccCCHHHHHHHHHHH
Confidence 22689999999998875
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=186.30 Aligned_cols=186 Identities=18% Similarity=0.215 Sum_probs=139.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|+|+||||||+||++++++|+++|++|++++| ++...... ...+++++.+|++|.+++.++++++|+|||+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-Chhhcccc--------cCCceEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 78999999999999999999999999999999 54322111 1347899999999999999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+..... ++ .+.|+.++.++++++++.+ +++||++||.+++..... .+ .+.+.|+
T Consensus 75 a~~~~~~--~~----~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~--------~~----------~~~~~y~ 129 (206)
T 1hdo_A 75 LGTRNDL--SP----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK--------VP----------PRLQAVT 129 (206)
T ss_dssp CCCTTCC--SC----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC--------SC----------GGGHHHH
T ss_pred ccCCCCC--Cc----cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccc--------cc----------ccchhHH
Confidence 9875431 11 2478999999999999998 899999999876533210 00 0235699
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+|..+|.+++. ++++++++||+.++........... . +..+ . .+++|++|+|+++++++
T Consensus 130 ~~K~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~-------~-~~~~-----~-~~~i~~~Dva~~~~~~~ 189 (206)
T 1hdo_A 130 DDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTGAYTVT-------L-DGRG-----P-SRVISKHDLGHFMLRCL 189 (206)
T ss_dssp HHHHHHHHHHHH----TCSEEEEECCSEEECCCCCSCCEEE-------S-SSCS-----S-CSEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh----CCCCEEEEeCCcccCCCCCcceEec-------c-cCCC-----C-CCccCHHHHHHHHHHHh
Confidence 999999998853 7999999999998322111111000 0 1100 0 38999999999998763
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=203.35 Aligned_cols=197 Identities=21% Similarity=0.147 Sum_probs=138.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
|||||||||||||++|+++|+++||+|++++| ++... .+ ..| +...+.++++|+|||+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R-~~~~~--------------~~---~~~----~~~~~~l~~~d~vihl 58 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR-KPGPG--------------RI---TWD----ELAASGLPSCDAAVNL 58 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCTT--------------EE---EHH----HHHHHCCCSCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCcC--------------ee---ecc----hhhHhhccCCCEEEEe
Confidence 47999999999999999999999999999999 44111 11 111 2334456789999999
Q ss_pred eeccCC----C-CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 86 AAPIDI----H-GKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 86 a~~~~~----~-~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|+.... . ........+++|+.++.+|+++++..+ +..++|+.||.++|+.. ...+.+|+++..
T Consensus 59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~--~~~~~~E~~p~~--------- 127 (298)
T 4b4o_A 59 AGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS--LTAEYDEDSPGG--------- 127 (298)
T ss_dssp CCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC--SSCCBCTTCCCS---------
T ss_pred ccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC--CCCcccccCCcc---------
Confidence 985322 1 123345688899999999999999876 23468888998876544 345667776543
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCccccc-cccCcCceeHHHHHH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYS-MLLNISMVHIDDVAR 237 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~i~v~Dva~ 237 (243)
+...|+..|...|.... ....+++++++||+.+|||+.. .+..+... ..+....+. +++.++|||++|+|+
T Consensus 128 ~~~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~ 200 (298)
T 4b4o_A 128 DFDFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGGG-----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAG 200 (298)
T ss_dssp CSSHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTSH-----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHH
T ss_pred ccchhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCCC-----chhHHHHHHhcCCcceecccCceeecCcHHHHHH
Confidence 34557777776665432 2456899999999999999632 22333322 233333333 377899999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
++.++
T Consensus 201 a~~~~ 205 (298)
T 4b4o_A 201 ILTHA 205 (298)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=194.83 Aligned_cols=203 Identities=13% Similarity=0.101 Sum_probs=150.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+|+||||+|+||++++++|+++|++|++++| +...... ...+.. .+.++.++.+|++|++++.++++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 4433221 222222 23578899999999999998886
Q ss_pred --cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++. +.+ .++||++||.+++.+.
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----------- 153 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN----------- 153 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-----------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-----------
Confidence 78999999997543 1234566789999999999988875 345 6899999997654322
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.|.+++.++.+. |++++++|||.++++....... .......... .++.
T Consensus 154 -----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~-~~~~-- 216 (255)
T 1fmc_A 154 -----------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQH-TPIR-- 216 (255)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC---HHHHHHHHHT-CSSC--
T ss_pred -----------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC---hHHHHHHHhc-CCcc--
Confidence 133569999999999999988774 8999999999999985332211 1111111111 1222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 217 ---~~~~~~dva~~~~~l 231 (255)
T 1fmc_A 217 ---RLGQPQDIANAALFL 231 (255)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---cCCCHHHHHHHHHHH
Confidence 689999999998775
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=195.15 Aligned_cols=205 Identities=18% Similarity=0.185 Sum_probs=137.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHh-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAI----- 76 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----- 76 (243)
.++|+|+||||+|+||++++++|+++|++|++++| +...... ...+.. .+.+++++.+|++|.+++.+++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR-NEYELNECLSKWQK---KGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 5432222 222222 1347899999999999888887
Q ss_pred ---ccccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCccccc
Q 026091 77 ---AGCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 77 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.++|+|||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||.+++.+.+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 159 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS------- 159 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC-------
Confidence 458999999996543 233456678999999999999888 4456 68999999987653321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.+.+.+.++.+. |++++++|||.++++....... ..+...... ..++
T Consensus 160 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~-~~~~ 220 (266)
T 1xq1_A 160 ---------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFKKVVIS-RKPL 220 (266)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------
T ss_pred ---------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHHHHHHh-cCCC
Confidence 23569999999999999998774 9999999999999986433210 001111111 1112
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+++++|+|+++++++
T Consensus 221 ~-----~~~~~~dva~~~~~l~ 237 (266)
T 1xq1_A 221 G-----RFGEPEEVSSLVAFLC 237 (266)
T ss_dssp --------CCGGGGHHHHHHHT
T ss_pred C-----CCcCHHHHHHHHHHHc
Confidence 2 5889999999988763
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=192.75 Aligned_cols=204 Identities=14% Similarity=0.174 Sum_probs=154.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|+++.|++.+..+... .+.. .+.++.++++|++|.++++++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA---KGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999885544332222 1222 24578999999999999988886
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||.+.+.+.+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 149 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP--------- 149 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC---------
Confidence 68999999997543 234556679999999999999988 4455 67999999977654331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ........ ...++.
T Consensus 150 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~-~~~p~~- 210 (246)
T 3osu_A 150 -------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS----DELKEQML-TQIPLA- 210 (246)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC----HHHHHHHH-TTCTTC-
T ss_pred -------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC----HHHHHHHH-hcCCCC-
Confidence 3356999999999999999875 5899999999999998654332 22222222 122233
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+++|+|+++++++
T Consensus 211 ----r~~~~~dva~~v~~l~ 226 (246)
T 3osu_A 211 ----RFGQDTDIANTVAFLA 226 (246)
T ss_dssp ----SCBCHHHHHHHHHHHT
T ss_pred ----CCcCHHHHHHHHHHHh
Confidence 7889999999998864
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=202.55 Aligned_cols=182 Identities=21% Similarity=0.262 Sum_probs=140.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|+|||||||||||++++++|+++ |++|++++| ++.... .+.. .+++++.+|++|++++.++++++|+||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~---~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKAS---TLAD-----QGVEVRHGDYNQPESLQKAFAGVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTTH---HHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc-CHHHHh---HHhh-----cCCeEEEeccCCHHHHHHHHhcCCEEE
Confidence 47999999999999999999998 999999999 443221 1111 368999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+|+.. . + . +.|+.++.+++++|++.+ +++|||+||.+++ .. + .+
T Consensus 72 ~~a~~~-~---~---~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~-----------------------~-~~ 116 (287)
T 2jl1_A 72 FISGPH-Y---D---N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-ES-----------------------I-IP 116 (287)
T ss_dssp ECCCCC-S---C---H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-GC-----------------------C-ST
T ss_pred EcCCCC-c---C---c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CC-----------------------C-Cc
Confidence 999862 1 1 1 578999999999999999 9999999998653 10 0 24
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+++. +|++++++||+.++|+... ..+. .........+. +++.++++|++|+|++++.+
T Consensus 117 y~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 185 (287)
T 2jl1_A 117 LAHVHLATEYAIRT----TNIPYTFLRNALYTDFFVN----EGLR---ASTESGAIVTNAGSGIVNSVTRNELALAAATV 185 (287)
T ss_dssp HHHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSS----GGGH---HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCCCeEEEECCEeccccch----hhHH---HHhhCCceeccCCCCccCccCHHHHHHHHHHH
Confidence 99999999998864 6999999999998886411 1122 12212222222 36778999999999998764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=199.00 Aligned_cols=191 Identities=19% Similarity=0.078 Sum_probs=146.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~ 84 (243)
+|+||||||+||++++++|++ |++|++++|+.. . . .+ +.+|++|.+++.+++++ +|+|||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~-~----~---------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSE-I----Q---------GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSC-C----T---------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCc-C----C---------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 799999999999999999995 899999999432 1 0 12 78999999999999986 999999
Q ss_pred eeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+||..... ..+++...+++|+.++.++++++++.+ + +|||+||.++|.+.. .+++|+.+.. |.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~---~~~~e~~~~~---------~~~~ 129 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEK---GNYKEEDIPN---------PINY 129 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSS---CSBCTTSCCC---------CSSH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCC---CCcCCCCCCC---------CCCH
Confidence 99975431 113456889999999999999999988 5 999999998765432 2567766432 4567
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
|+.+|.++|.+++. ++++++||+.+||+ ..+...+... ..+.......+ .++++|++|+|++++++
T Consensus 130 Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~ 196 (273)
T 2ggs_A 130 YGLSKLLGETFALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILEL 196 (273)
T ss_dssp HHHHHHHHHHHHCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHH
Confidence 99999999998876 67899999999982 1223333333 23333333334 67999999999998865
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-28 Score=192.89 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=151.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +.+....... .. ..++.++++|++|++++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADI-DIERARQAAA--EI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 5433222211 11 3468999999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG----TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +..+||++||.+.+.+.+
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 150 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA---------- 150 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----------
Confidence 68999999997543 2345677889999999999999876542 135899999987553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC--c--cc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN--R--EE 220 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~--~--~~ 220 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++++..... .......... . ..
T Consensus 151 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~ 213 (259)
T 4e6p_A 151 ------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV-----DALFARYENRPRGEKKR 213 (259)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH-----HHHHHHHHTCCTTHHHH
T ss_pred ------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh-----hhhhhhhccCChHHHHH
Confidence 23569999999999999998774 89999999999999853211 0011111000 0 00
Q ss_pred -cc-cccCcCceeHHHHHHhhhccC
Q 026091 221 -YS-MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 -~~-~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .....++.+++|+|+++++|+
T Consensus 214 ~~~~~~p~~r~~~~~dva~~v~~L~ 238 (259)
T 4e6p_A 214 LVGEAVPFGRMGTAEDLTGMAIFLA 238 (259)
T ss_dssp HHHHHSTTSSCBCTHHHHHHHHHTT
T ss_pred HHhccCCCCCCcCHHHHHHHHHHHh
Confidence 00 122348999999999998874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-28 Score=192.41 Aligned_cols=206 Identities=16% Similarity=0.123 Sum_probs=150.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +..... ....+.. .+.+++++.+|++|.+++.++++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADL-DEAMATKAVEDLRM---EGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 443222 2222222 13578999999999999988876
Q ss_pred --cccEEEEeeeccC-C-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPID-I-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||... . ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+.
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~------- 159 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRP------- 159 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS-------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCC-------
Confidence 5899999999654 2 12234567899999999999988765 34 679999999764422210
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
.+...|+.+|.+.|.+++.++.+ +|++++++|||.++++........ .......... .++
T Consensus 160 -------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~- 222 (260)
T 3awd_A 160 -------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK--PELYDAWIAG-TPM- 222 (260)
T ss_dssp -------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC--HHHHHHHHHT-CTT-
T ss_pred -------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC--hHHHHHHHhc-CCc-
Confidence 12256999999999999999887 699999999999999864311000 1111111111 122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 223 ----~~~~~~~dva~~~~~l 238 (260)
T 3awd_A 223 ----GRVGQPDEVASVVQFL 238 (260)
T ss_dssp ----SSCBCHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHH
Confidence 2689999999998865
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=191.42 Aligned_cols=202 Identities=17% Similarity=0.126 Sum_probs=149.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---CT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d 80 (243)
++|+++||||+|+||++++++|+++|++|++++| +........ ... .+++++.+|++|.+++.+++++ +|
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSDLVSLA--KEC----PGIEPVCVDLGDWDATEKALGGIGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHS----TTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hhc----cCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999 543322211 111 2567889999999999999874 79
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+|||+||.... .+.+.+...+++|+.++.++++++.+. +..++||++||..++.+.+
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 144 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-------------- 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC--------------
Confidence 99999996432 233456679999999999999887764 2136899999987543321
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
+...|+.+|.+.|.+++.++.+ +|++++++|||.++|+........ .........+. + .++
T Consensus 145 --------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~--~-----~~~ 208 (244)
T 1cyd_A 145 --------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-PEFARKLKERH--P-----LRK 208 (244)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-HHHHHHHHHHS--T-----TSS
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-HHHHHHHHhcC--C-----ccC
Confidence 2346999999999999999877 589999999999999853211111 01111111111 1 238
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
+++++|+|++++++
T Consensus 209 ~~~~~dva~~~~~l 222 (244)
T 1cyd_A 209 FAEVEDVVNSILFL 222 (244)
T ss_dssp CBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999998875
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-28 Score=192.31 Aligned_cols=193 Identities=20% Similarity=0.239 Sum_probs=149.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++|+.. .. ...++.++.+|++|++++.++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK-PS-----------ADPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC-CC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh-hc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 5689999999999999999999999999999999433 11 12378999999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||..++...+
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 163 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMV---------- 163 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCC----------
Confidence 68999999997543 234556788999999999999887 4455 67999999976432211
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
.++...|+.+|.+.+.+.+.++.+. |+++++++||.++++..... .. .... ...+..
T Consensus 164 ----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~----~~~~-~~~p~~-- 223 (260)
T 3un1_A 164 ----------GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---TH----STLA-GLHPVG-- 223 (260)
T ss_dssp ----------TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GH----HHHH-TTSTTS--
T ss_pred ----------CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HH----HHHh-ccCCCC--
Confidence 0134569999999999999999886 89999999999999864321 11 1111 112222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 224 ---r~~~~~dva~av~~L 238 (260)
T 3un1_A 224 ---RMGEIRDVVDAVLYL 238 (260)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHh
Confidence 789999999999875
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=191.43 Aligned_cols=201 Identities=20% Similarity=0.145 Sum_probs=152.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..........+ +.++.++.+|++|.+++.++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999443222211111 3478999999999999998887
Q ss_pred -cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||..++.+.+
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 154 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD-------- 154 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS--------
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC--------
Confidence 68999999997532 234556789999999999999988 5555 67999999987553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++....... ........ ...+..
T Consensus 155 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~-~~~~~~ 216 (271)
T 3tzq_B 155 --------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP---QPIVDIFA-THHLAG 216 (271)
T ss_dssp --------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C---HHHHHHHH-TTSTTS
T ss_pred --------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC---HHHHHHHH-hcCCCC
Confidence 3356999999999999999888 69999999999999986542221 11112221 122222
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 217 -----r~~~p~dvA~~v~~L 231 (271)
T 3tzq_B 217 -----RIGEPHEIAELVCFL 231 (271)
T ss_dssp -----SCBCHHHHHHHHHHH
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=194.80 Aligned_cols=204 Identities=22% Similarity=0.174 Sum_probs=152.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.+.|+++||||+|+||++++++|+++|++|++++| +.+.. .....+... ...++.++++|++|.++++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR-STADIDACVADLDQL--GSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT--SSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--CCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 44332 222222221 12578999999999999988876
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceee-ecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTV-HFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~-~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. + .++||++||.... .+.
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 155 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGY-------- 155 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCC--------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC--------
Confidence 68999999997543 234556678999999999998887765 5 6799999997542 111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++...... ........ ...+.
T Consensus 156 --------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~-~~~p~ 216 (262)
T 3pk0_A 156 --------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----EEYIASMA-RSIPA 216 (262)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----HHHHHHHH-TTSTT
T ss_pred --------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----HHHHHHHH-hcCCC
Confidence 12356999999999999999988 5999999999999998533221 11111111 11222
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|+++++|
T Consensus 217 ~-----r~~~p~dva~~v~~L 232 (262)
T 3pk0_A 217 G-----ALGTPEDIGHLAAFL 232 (262)
T ss_dssp S-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 688999999998876
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-28 Score=191.99 Aligned_cols=203 Identities=18% Similarity=0.168 Sum_probs=145.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++|+.......... .+.++.++.+|++|.+++.++++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE------LGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH------hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999954422211111 13478999999999999988886
Q ss_pred --cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEEecceeeecCC
Q 026091 78 --GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG---------TVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 78 --~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~Ss~~~~~~~~ 137 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.- ...+||++||.+.+.+.+
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 68999999997543 1235577889999999999999887641 146899999987654331
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .....
T Consensus 159 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~ 212 (257)
T 3tpc_A 159 ----------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----VQDAL 212 (257)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----HHHHH
Confidence 2356999999999999999887 689999999999999864332111 11111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ...++ ...+.+++|+|++++++
T Consensus 213 ~-~~~p~----~~r~~~~~dva~~v~~l 235 (257)
T 3tpc_A 213 A-ASVPF----PPRLGRAEEYAALVKHI 235 (257)
T ss_dssp --CCSSS----SCSCBCHHHHHHHHHHH
T ss_pred H-hcCCC----CCCCCCHHHHHHHHHHH
Confidence 1 11111 02689999999999876
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-28 Score=193.21 Aligned_cols=207 Identities=17% Similarity=0.157 Sum_probs=149.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHh-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAI----- 76 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----- 76 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++++++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSR-NQKELNDCLTQWRS---KGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999 5433222 222221 1346889999999999988887
Q ss_pred ---ccccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 77 ---AGCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 77 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.++|++||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||.+++.+.
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------- 153 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV-------- 153 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC--------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC--------
Confidence 358999999996532 2335567889999999999998874 345 6799999997654322
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCc-HHHHHHHHhcCccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGS-VRGTLAMVMGNREE 220 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~ 220 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+.++......... ......... ...+
T Consensus 154 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~ 218 (260)
T 2ae2_A 154 --------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI-DRCA 218 (260)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH-HTST
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHH-hcCC
Confidence 123569999999999999998774 899999999999987421111100 000000111 1111
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ..+++++|+|++++++
T Consensus 219 ~-----~~~~~~~dvA~~v~~l 235 (260)
T 2ae2_A 219 L-----RRMGEPKELAAMVAFL 235 (260)
T ss_dssp T-----CSCBCHHHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHHHH
Confidence 2 2689999999998875
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-28 Score=187.99 Aligned_cols=187 Identities=17% Similarity=0.155 Sum_probs=136.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHH-HcCCeEEEEEeCCch-hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLL-DHGYSVRTTVRSDPE-QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
|||+|+||||||+||++++++|+ +.|++|++++| +++ ....+. . ...+++++.+|++|.+++.++++++|+
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r-~~~~~~~~~~---~---~~~~~~~~~~D~~d~~~~~~~~~~~d~ 76 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGR-QLKTRIPPEI---I---DHERVTVIEGSFQNPGXLEQAVTNAEV 76 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES-SHHHHSCHHH---H---TSTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec-Cccccchhhc---c---CCCceEEEECCCCCHHHHHHHHcCCCE
Confidence 45679999999999999999999 89999999999 554 332221 0 135789999999999999999999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+||.. |+. +.++++++++.+ +++||++||.+++...+. ... .+.. ..+.
T Consensus 77 vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~---~~~-------~~~~--~~~~ 128 (221)
T 3r6d_A 77 VFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPV---ALE-------KWTF--DNLP 128 (221)
T ss_dssp EEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCH---HHH-------HHHH--HTSC
T ss_pred EEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCc---ccc-------cccc--cccc
Confidence 99999853 333 889999999998 899999999876543211 000 0000 0111
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
+.|+.+|..+|.+++. +|++++++|||.++++........ ......+ ...+++.+|+|+++++
T Consensus 129 ~~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~---------~~~~~~~----~~~~~~~~dvA~~~~~ 191 (221)
T 3r6d_A 129 ISYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEXTDYEL---------IPEGAQF----NDAQVSREAVVKAIFD 191 (221)
T ss_dssp HHHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTCCCCEE---------ECTTSCC----CCCEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCCcceee---------ccCCccC----CCceeeHHHHHHHHHH
Confidence 2699999999998764 799999999999999732211100 0000111 1248999999999887
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 192 l 192 (221)
T 3r6d_A 192 I 192 (221)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=187.98 Aligned_cols=184 Identities=17% Similarity=0.103 Sum_probs=145.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~v 82 (243)
|+|+||||+|+||++++++|+++ +|++++| ++........ ... . +++.+|++|++++.++++ ++|+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r-~~~~~~~~~~--~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGR-RAGALAELAR--EVG----A-RALPADLADELEAKALLEEAGPLDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECS-CHHHHHHHHH--HHT----C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEEC-CHHHHHHHHH--hcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence 58999999999999999999988 9999999 5433322211 111 2 889999999999999998 89999
Q ss_pred EEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 83 IHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 83 i~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
||+||.... ...+.+...+++|+.++.++++++++.+ .++||++||.+++.+.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~--------------------- 128 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV--------------------- 128 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS---------------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC---------------------
Confidence 999997543 2446677899999999999999997766 7899999998765322
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDD 234 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 234 (243)
++...|+.+|.+.|.+++.++.+ +|++++++|||.++++... +.. ...+++++++|
T Consensus 129 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------~~~-----~~~~~~~~~~d 187 (207)
T 2yut_A 129 -PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------PLG-----GPPKGALSPEE 187 (207)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------GGT-----SCCTTCBCHHH
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------ccC-----CCCCCCCCHHH
Confidence 13356999999999999999877 5999999999999998511 111 11248999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++++
T Consensus 188 va~~~~~~ 195 (207)
T 2yut_A 188 AARKVLEG 195 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-28 Score=194.98 Aligned_cols=210 Identities=19% Similarity=0.195 Sum_probs=152.1
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++|+..........+........++.++.+|++|.+++.++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999994332222233333322223378999999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. .-.+||++||.+++.+.+
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 159 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR--------- 159 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC---------
Confidence 47999999996221 3345567899999999999999876642 135999999987653331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.||.+.+.+.+.++.+. |+++++++||.++++........ .. ...... ...++.
T Consensus 160 -------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~-~~~~~~-~~~p~~- 222 (281)
T 3svt_A 160 -------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-AE-LSSDYA-MCTPLP- 222 (281)
T ss_dssp -------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HH-HHHHHH-HHCSSS-
T ss_pred -------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-HH-HHHHHH-hcCCCC-
Confidence 23569999999999999998774 69999999999999853221000 01 111111 111222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 223 ----r~~~~~dva~~~~~l 237 (281)
T 3svt_A 223 ----RQGEVEDVANMAMFL 237 (281)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 788999999998876
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=190.24 Aligned_cols=211 Identities=18% Similarity=0.198 Sum_probs=151.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh--------hchhhhh-hcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ--------KRDLSFL-TNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|+++||||+|+||++++++|+++|++|++++|+.... .+.+... ......+.++.++++|++|.+++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 568999999999999999999999999999999942110 1111111 1111224678999999999999988
Q ss_pred Hhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCC
Q 026091 75 AIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~ 138 (243)
+++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||..++.+.+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~- 166 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANF- 166 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCT-
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCCC-
Confidence 886 68999999997543 23455678899999999999998643 44 57999999987553321
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC-----C-C----C
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ-----L-A----G 205 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~-----~-~----~ 205 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++..... . + .
T Consensus 167 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 225 (281)
T 3s55_A 167 ---------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP 225 (281)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence 2356999999999999999886 589999999999999865421 0 0 0
Q ss_pred cHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 206 SVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
............. ....++++++|+|++++++
T Consensus 226 ~~~~~~~~~~~~~-----~~~~~~~~p~dvA~~v~~L 257 (281)
T 3s55_A 226 TLKDVESVFASLH-----LQYAPFLKPEEVTRAVLFL 257 (281)
T ss_dssp CHHHHHHHHHHHC-----SSSCSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhh-----ccCcCCCCHHHHHHHHHHH
Confidence 0111111110001 1124799999999999876
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=191.95 Aligned_cols=208 Identities=17% Similarity=0.163 Sum_probs=146.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+..... ..+......+.++.++.+|++|++++.++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999 54332221 1111001123468999999999999998887
Q ss_pred --cccEEEEeeeccCC-----C----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEeccee-eecCCCCcc
Q 026091 78 --GCTGVIHVAAPIDI-----H----GKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSAST-VHFSGKDVD 141 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~-~~~~~~~~~ 141 (243)
++|+|||+||.... . +.+.+...+++|+.++.++++++.+. + ++||++||.++ +.+.
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~----- 156 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHAT----- 156 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCC-----
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCC-----
Confidence 78999999987532 1 33456678999999999999987765 4 79999999765 3221
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC---CCc--HHHHHHH
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL---AGS--VRGTLAM 213 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~---~~~--~~~~~~~ 213 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++...... ... .......
T Consensus 157 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 219 (278)
T 1spx_A 157 -----------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT 219 (278)
T ss_dssp -----------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred -----------------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence 12346999999999999998876 5899999999999998643211 000 0000111
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
... ..+. ..+++++|+|++++++
T Consensus 220 ~~~-~~p~-----~~~~~~~dvA~~v~~l 242 (278)
T 1spx_A 220 MKE-CVPA-----GVMGQPQDIAEVIAFL 242 (278)
T ss_dssp HHH-HCTT-----SSCBCHHHHHHHHHHH
T ss_pred HHh-cCCC-----cCCCCHHHHHHHHHHH
Confidence 111 1112 2689999999998875
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-28 Score=193.55 Aligned_cols=210 Identities=16% Similarity=0.190 Sum_probs=150.6
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+..... ..+... .+.++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR-QVDRLHEAARSLKEK--FGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 54332221 111110 03478999999999999988886
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 152 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW-------- 152 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC--------
Confidence 68999999997543 23345678899999999999887754 45 67999999987553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHh
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVM 215 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~ 215 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++....... ...........
T Consensus 153 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (263)
T 3ai3_A 153 --------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVA 218 (263)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHH
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHH
Confidence 2346999999999999999877 59999999999999984221000 00001111111
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
....+ ...+++++|+|+++++++
T Consensus 219 ~~~~p-----~~~~~~~~dvA~~~~~l~ 241 (263)
T 3ai3_A 219 DEHAP-----IKRFASPEELANFFVFLC 241 (263)
T ss_dssp HHHCT-----TCSCBCHHHHHHHHHHHT
T ss_pred hcCCC-----CCCCcCHHHHHHHHHHHc
Confidence 10011 237899999999998764
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=189.82 Aligned_cols=199 Identities=20% Similarity=0.222 Sum_probs=149.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+..... . ..++.++++|++|.+++.++++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~---~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR-RVERLKAL---N-----LPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHHHHHTT---C-----CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHh---h-----cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 4588999999999999999999999999999999 54332211 1 2378999999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||.+++.+.+
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~---------- 154 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP---------- 154 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC----------
Confidence 68999999997543 2335566789999999999777654 445 67999999987553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........... ........+..
T Consensus 155 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~-- 217 (266)
T 3p19_A 155 ------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIK---DGYDAWRVDMG-- 217 (266)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHH---HHHHHHHHHTT--
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhh---HHHHhhccccc--
Confidence 2356999999999999999877 589999999999999864433221111 11111111222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 218 ---r~~~pedvA~av~~l 232 (266)
T 3p19_A 218 ---GVLAADDVARAVLFA 232 (266)
T ss_dssp ---CCBCHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHH
Confidence 689999999999886
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=191.71 Aligned_cols=214 Identities=19% Similarity=0.234 Sum_probs=148.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..+...... .+... .+.++.++.+|++|.+++.++++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL--SSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT--CSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc--cCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999995443322221 12111 24578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++. +.+ .++||++||.+.+.+.+
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 171 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP--------- 171 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC---------
Confidence 58999999997543 2345677899999999999999874 444 57999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc--Ccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG--NREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++................... .....
T Consensus 172 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (281)
T 3v2h_A 172 -------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVML 238 (281)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHH
Confidence 23569999999999999998774 8999999999999986443321111000000000 00000
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.......+++++|+|+++++|
T Consensus 239 ~~~p~~r~~~~edvA~~v~~L 259 (281)
T 3v2h_A 239 KGQPTKKFITVEQVASLALYL 259 (281)
T ss_dssp -CCTTCSCBCHHHHHHHHHHH
T ss_pred hcCCCCCccCHHHHHHHHHHH
Confidence 112234799999999999876
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-28 Score=189.38 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=126.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||+||||||||+||++++++|++.| ++|++++| +++....+ ...+++++++|++|.+++.++++++|+|
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R-~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES-SGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc-Chhhhccc--------ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 47899999999999999999999999 89999999 54332211 1347899999999999999999999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+++.. .. . ..+.++++++++.+ +++||++||.+++...+.......+..+.
T Consensus 93 v~~a~~~------~~--~-----~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~------------- 145 (236)
T 3qvo_A 93 YANLTGE------DL--D-----IQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIG------------- 145 (236)
T ss_dssp EEECCST------TH--H-----HHHHHHHHHHHHTT-CCEEEEECCCCC----------------C-------------
T ss_pred EEcCCCC------ch--h-----HHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhccc-------------
Confidence 9999752 11 1 23668999999999 89999999998775543222222222211
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+..+|..+ +++|++++++|||.++++...... . ......+ ...+++++|+|++++++
T Consensus 146 ~~~~~~~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~~---------~-~~~~~~~----~~~~i~~~DvA~~i~~l 207 (236)
T 3qvo_A 146 EPLKPFRRAADAI----EASGLEYTILRPAWLTDEDIIDYE---------L-TSRNEPF----KGTIVSRKSVAALITDI 207 (236)
T ss_dssp GGGHHHHHHHHHH----HTSCSEEEEEEECEEECCSCCCCE---------E-ECTTSCC----SCSEEEHHHHHHHHHHH
T ss_pred chHHHHHHHHHHH----HHCCCCEEEEeCCcccCCCCcceE---------E-eccCCCC----CCcEECHHHHHHHHHHH
Confidence 1333344444444 357999999999999997432210 0 0011111 12689999999999876
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=187.13 Aligned_cols=201 Identities=18% Similarity=0.151 Sum_probs=148.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cc
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GC 79 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~ 79 (243)
.++|+|+||||+|+||++++++|+++|++|++++| +.+....+. ... .+++++.+|++|.+++.++++ ++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQADLDSLV--REC----PGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHc----CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999999 543322211 111 256788999999999999987 47
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|+|||+||.... ...+.+...+++|+.++.++.+++.+. +..++||++||..++.+.
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 143 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-------------- 143 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC--------------
Confidence 999999996542 233456789999999999998887664 214789999997654222
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCcccccccc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
++...|+.+|.+.|.+++.++.+ +|++++++|||.++++...... ...... .... .+.
T Consensus 144 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~--~~~---- 206 (244)
T 3d3w_A 144 --------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKT---MLNR--IPL---- 206 (244)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHH---HHHT--CTT----
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHH---HHhh--CCC----
Confidence 13356999999999999999877 4899999999999998533111 111111 1111 112
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.++++++|+|++++++
T Consensus 207 -~~~~~~~dva~~~~~l 222 (244)
T 3d3w_A 207 -GKFAEVEHVVNAILFL 222 (244)
T ss_dssp -CSCBCHHHHHHHHHHH
T ss_pred -CCCcCHHHHHHHHHHH
Confidence 2789999999998875
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=188.79 Aligned_cols=204 Identities=18% Similarity=0.155 Sum_probs=148.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||++++++|+++|++|++++| +....... ..+. ...+.+++++.+|++|.+++.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDL-SAETLEETARTHW--HAYADKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHS--TTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999 54332221 1110 1123478999999999999988886
Q ss_pred -cccEEEEeeeccCCC--------CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 -GCTGVIHVAAPIDIH--------GKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||..... ..+.+...+++|+.++.++.+.+.+ .+ .++||++||.+++.+.+
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 150 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP------- 150 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC-------
Confidence 689999999875321 2345667899999999877766543 45 68999999986543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.+.+.+.++.+. |++++++|||.++++........ ..+...... ..++
T Consensus 151 ---------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~ 212 (250)
T 2cfc_A 151 ---------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ--PELRDQVLA-RIPQ 212 (250)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS--HHHHHHHHT-TCTT
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC--HHHHHHHHh-cCCC
Confidence 23569999999999999998775 99999999999999864321110 111111111 1122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|++++++
T Consensus 213 ~-----~~~~~~dva~~~~~l 228 (250)
T 2cfc_A 213 K-----EIGTAAQVADAVMFL 228 (250)
T ss_dssp C-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 688999999998875
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=188.36 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=142.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|+.++|+|+||||+|+||++++++|+++|++|++++++++..... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA---AGINVVVAKGDVKNPEDVENMVKTA 77 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH---TTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 666678999999999999999999999999999995434432222 122221 23578999999999999988876
Q ss_pred -----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccc
Q 026091 78 -----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||.+..++.+
T Consensus 78 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------ 150 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA------ 150 (247)
T ss_dssp HHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC------
Confidence 68999999997542 23345668999999999988887664 45 67999999976544321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.|.+.+.++.+. |+++++++||.+.++..... . ......... ..+
T Consensus 151 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~-~~~ 209 (247)
T 2hq1_A 151 ----------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL-P---DKVKEMYLN-NIP 209 (247)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-C---HHHHHHHHT-TST
T ss_pred ----------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-c---hHHHHHHHh-hCC
Confidence 23569999999999999998774 89999999999988742211 1 111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ..+++++|+|++++++
T Consensus 210 ~-----~~~~~~~dva~~~~~l 226 (247)
T 2hq1_A 210 L-----KRFGTPEEVANVVGFL 226 (247)
T ss_dssp T-----SSCBCHHHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHHHH
Confidence 2 2689999999998765
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=188.94 Aligned_cols=195 Identities=15% Similarity=0.202 Sum_probs=146.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... ..++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEEGKAMA--AEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---hcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 543322211 111 1247899999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... .+.+.+...+++|+.++.++.+.+ ++.+ .++||++||.+++.+.+
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV---------- 148 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC----------
Confidence 68999999997543 233456789999999997666654 4455 68999999987553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|++++++|||.++++... .... ... ..+.
T Consensus 149 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~-------~~~--~~~~--- 203 (260)
T 1nff_A 149 ------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPE-------DIF--QTAL--- 203 (260)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCT-------TCS--CCSS---
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchh-------hHH--hCcc---
Confidence 2346999999999999999877 5999999999999998643 1000 000 1111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 204 --~~~~~~~dvA~~v~~l 219 (260)
T 1nff_A 204 --GRAAEPVEVSNLVVYL 219 (260)
T ss_dssp --SSCBCHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHH
Confidence 2678999999998875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=188.58 Aligned_cols=206 Identities=15% Similarity=0.152 Sum_probs=146.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHh------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAI------ 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------ 76 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.+++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLEIWRE---KGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 5433222 122221 2457899999999999888887
Q ss_pred --ccccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 77 --AGCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 77 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
.++|++||+||.... .+.+++...+++|+.++.++++++. +.+ .++||++||.+++.+.+
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 166 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP-------- 166 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT--------
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC--------
Confidence 358999999997543 2334567788999999999998874 345 57999999987553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCc--HHHHHHHHhcCccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGS--VRGTLAMVMGNREE 220 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++++......... .......... ..+
T Consensus 167 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~p 231 (273)
T 1ae1_A 167 --------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV-KTP 231 (273)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH-HST
T ss_pred --------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh-cCC
Confidence 23569999999999999998774 899999999999998643221100 0011111111 111
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. .+.+++|+|++++++
T Consensus 232 ~~-----r~~~p~dvA~~v~~l 248 (273)
T 1ae1_A 232 MG-----RAGKPQEVSALIAFL 248 (273)
T ss_dssp TC-----SCBCHHHHHHHHHHH
T ss_pred CC-----CCcCHHHHHHHHHHH
Confidence 22 688999999998876
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=191.22 Aligned_cols=206 Identities=17% Similarity=0.177 Sum_probs=146.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCC----CCCCCeEEEecCCCChhhHHHHhcc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLP----RASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
++|+|+||||+|+||++++++|+++|++|++++| +....... ..+.... ....++.++.+|++|.+++.+++++
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDL-DRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999 44332221 1111100 0014689999999999999888875
Q ss_pred -------c-cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcc
Q 026091 79 -------C-TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 79 -------~-d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
+ |+|||+||.... ...+.+...+++|+.++.++++++.+. +..++||++||...+.+.+
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 160 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV---- 160 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT----
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC----
Confidence 3 999999997543 234556788999999999999987764 2136899999976543321
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR 218 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~ 218 (243)
+...|+.+|.+.+.+.+.++.+ +|++++++|||.++++....... ....... ..
T Consensus 161 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~-~~ 217 (264)
T 2pd6_A 161 ------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ----KVVDKIT-EM 217 (264)
T ss_dssp ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTG-GG
T ss_pred ------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH----HHHHHHH-Hh
Confidence 2356999999999999999877 69999999999999986432111 1111111 11
Q ss_pred cccccccCcCceeHHHHHHhhhcc
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+. ..+++++|+|++++++
T Consensus 218 ~~~-----~~~~~~~dva~~~~~l 236 (264)
T 2pd6_A 218 IPM-----GHLGDPEDVADVVAFL 236 (264)
T ss_dssp CTT-----CSCBCHHHHHHHHHHH
T ss_pred CCC-----CCCCCHHHHHHHHHHH
Confidence 111 2678999999998765
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=198.92 Aligned_cols=196 Identities=17% Similarity=0.165 Sum_probs=141.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
+++||||||||+||++++++|++.|++|++++|+..........+... ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL--EDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH--HHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH--HhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 468999999999999999999999999999999542222222211111 12489999999999999999999 99999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+|+.. |+.++.+++++|++.+++++||+ |+ ++ . ..+|..+. +|.+
T Consensus 88 i~~a~~~--------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g-~-----~~~e~~~~---------~p~~ 134 (346)
T 3i6i_A 88 VSTVGGE--------------SILDQIALVKAMKAVGTIKRFLP-SE---FG-H-----DVNRADPV---------EPGL 134 (346)
T ss_dssp EECCCGG--------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CS-S-----CTTTCCCC---------TTHH
T ss_pred EECCchh--------------hHHHHHHHHHHHHHcCCceEEee-cc---cC-C-----CCCccCcC---------CCcc
Confidence 9999862 77889999999999987888886 43 21 1 12333321 2446
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
.|+.+|..+|++++. +|++++++||+.++|....... ........+....+. ++..++++|++|+|++++
T Consensus 135 ~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~ 206 (346)
T 3i6i_A 135 NMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM 206 (346)
T ss_dssp HHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHHHHH
Confidence 799999999998876 6999999999999997533221 111011112222222 255789999999999988
Q ss_pred ccC
Q 026091 241 FFT 243 (243)
Q Consensus 241 ~~~ 243 (243)
.++
T Consensus 207 ~~l 209 (346)
T 3i6i_A 207 KTV 209 (346)
T ss_dssp HHT
T ss_pred HHH
Confidence 753
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=187.27 Aligned_cols=205 Identities=15% Similarity=0.137 Sum_probs=155.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|+.++|+++||||+|+||++++++|+++|++|++++| +....... ..+.. .+.++.++.+|++|.+++.++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTAT-SQASAEKFENSMKE---KGFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHH
Confidence 6667899999999999999999999999999999999 54333222 22222 24578999999999999988876
Q ss_pred -----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccc
Q 026091 78 -----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... .+.+.+...+++|+.++.++++.+.+. + ..+||++||...+.+.+
T Consensus 77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 149 (247)
T 3lyl_A 77 KAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNP------ 149 (247)
T ss_dssp HHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT------
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC------
Confidence 36999999997543 234566789999999999998886653 4 46999999987553331
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ........ ...+
T Consensus 150 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~-~~~~ 208 (247)
T 3lyl_A 150 ----------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT----DEQKSFIA-TKIP 208 (247)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC----HHHHHHHH-TTST
T ss_pred ----------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc----HHHHHHHh-hcCC
Confidence 2356999999999999999876 4899999999999998654331 11111111 2222
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ..+.+++|+|++++++
T Consensus 209 ~-----~~~~~~~dva~~i~~l 225 (247)
T 3lyl_A 209 S-----GQIGEPKDIAAAVAFL 225 (247)
T ss_dssp T-----CCCBCHHHHHHHHHHH
T ss_pred C-----CCCcCHHHHHHHHHHH
Confidence 2 2789999999998875
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=188.18 Aligned_cols=200 Identities=18% Similarity=0.180 Sum_probs=150.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+........ . .....++++|++|.++++++++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTAT-SESGAQAISDY--L---GDNGKGMALNVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHH--H---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH--h---cccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 54333222211 1 1257889999999999988887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+++...+++|+.++.++.+++.+ .+ .++||++||.+.+.+.+
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 150 (248)
T 3op4_A 82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA---------- 150 (248)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC----------
Confidence 68999999997543 23456778999999999999998755 34 57999999977553331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++...... ........ ...+.
T Consensus 151 ------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~-~~~p~--- 210 (248)
T 3op4_A 151 ------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN----DEQRTATL-AQVPA--- 210 (248)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC----HHHHHHHH-HTCTT---
T ss_pred ------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC----HHHHHHHH-hcCCC---
Confidence 3356999999999999999876 4899999999999998643321 11111111 11122
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 211 --~r~~~p~dva~~v~~L 226 (248)
T 3op4_A 211 --GRLGDPREIASAVAFL 226 (248)
T ss_dssp --CSCBCHHHHHHHHHHH
T ss_pred --CCCcCHHHHHHHHHHH
Confidence 2789999999999876
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=189.84 Aligned_cols=207 Identities=20% Similarity=0.231 Sum_probs=151.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|+++.|+..........+.. ..+.++.++++|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK--DVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG--GGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999998855543333332211 124578999999999999988886
Q ss_pred --cccEEEEeeecc--CC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPI--DI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~--~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.. .. ...+.+...+++|+.++.++++++ ++.+ .++||++||.+.....+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~------- 154 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPG------- 154 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCC-------
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCC-------
Confidence 689999999942 11 233556788999999999999987 4555 67999999874321111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
.++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++..... ........ ....++
T Consensus 155 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~-~~~~p~ 216 (264)
T 3i4f_A 155 -------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLK-EHNTPI 216 (264)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC--------
T ss_pred -------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHH-hhcCCC
Confidence 013356999999999999999877 589999999999999864433 22211111 111222
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|++++++
T Consensus 217 ~-----r~~~~~dva~~v~~l 232 (264)
T 3i4f_A 217 G-----RSGTGEDIARTISFL 232 (264)
T ss_dssp ------CCCCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 688999999998876
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=196.13 Aligned_cols=210 Identities=15% Similarity=0.093 Sum_probs=145.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----GCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d 80 (243)
||+|+||||+|+||++++++|+++|++|++++|+.. .. . . .+.+|++|.+++.++++ ++|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~-~~---~----------~--~~~~D~~~~~~~~~~~~~~~~~~d 64 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQA-DI---E----------A--DLSTPGGRETAVAAVLDRCGGVLD 64 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS-SE---E----------C--CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh-Hc---c----------c--cccCCcccHHHHHHHHHHcCCCcc
Confidence 468999999999999999999999999999999432 11 0 0 16789999999999887 799
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCC-c---h-
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWS-D---V- 151 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~-~---~- 151 (243)
+|||+||.... ..++...+++|+.++.++++++.+. + .++||++||.+++.... ...+..|.... + +
T Consensus 65 ~vi~~Ag~~~~--~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~ 140 (255)
T 2dkn_A 65 GLVCCAGVGVT--AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGA-AELPMVEAMLAGDEARAI 140 (255)
T ss_dssp EEEECCCCCTT--SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTG-GGCHHHHHHHHTCHHHHH
T ss_pred EEEECCCCCCc--chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccc-cccchhhhhcccchhhhh
Confidence 99999997552 2446789999999999999987765 4 68999999988764331 11111111000 0 0
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-CCcHHHHHHHHhcCccccccccCc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL-AGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
.......++.+.|+.+|.+.|.+++.++++ +|++++++|||.++|+...... ..... ..... +.. ..+
T Consensus 141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~---~~~~~----~~~-~~~ 212 (255)
T 2dkn_A 141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG---ESTRR----FVA-PLG 212 (255)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH---HHHHS----CCC-TTS
T ss_pred hhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH---HHHHH----HHH-Hhc
Confidence 000011134467999999999999998876 6999999999999998421110 00000 00000 000 334
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
++++++|+|++++++
T Consensus 213 ~~~~~~dva~~~~~l 227 (255)
T 2dkn_A 213 RGSEPREVAEAIAFL 227 (255)
T ss_dssp SCBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 799999999998875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=190.71 Aligned_cols=181 Identities=17% Similarity=0.192 Sum_probs=132.2
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+||||||||+||++++++|.+. |++|++++| +++....+ . ..+++++.+|++|++++.++++++|+|||+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R-~~~~~~~~---~-----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDD---W-----RGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES-SGGGSCGG---G-----BTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC-CHHHHHHh---h-----hCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 6999999999999999999998 899999999 55332221 1 248999999999999999999999999999
Q ss_pred eeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHH
Q 026091 86 AAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYK 165 (243)
Q Consensus 86 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~ 165 (243)
|+.... ...|+.++.+++++|++.+ +++|||+||.+. . +..+ ..+.
T Consensus 73 a~~~~~---------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~--------~~~~-------------~~~~ 118 (289)
T 3e48_A 73 PSIIHP---------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---Q--------HNNP-------------FHMS 118 (289)
T ss_dssp CCCCCS---------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---S--------TTCC-------------STTH
T ss_pred CCCCcc---------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---C--------CCCC-------------Cccc
Confidence 986432 1347889999999999999 999999999431 1 0000 0012
Q ss_pred hhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhhcc
Q 026091 166 LSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 166 ~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+..+|..+ .+.|++++++||+.++|+. ...+.....+....+. +++.++++|++|+|++++.+
T Consensus 119 ~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 184 (289)
T 3e48_A 119 PYFGYASRLL----STSGIDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAI 184 (289)
T ss_dssp HHHHHHHHHH----HHHCCEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHH
T ss_pred hhHHHHHHHH----HHcCCCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHH
Confidence 2222344433 3469999999999999973 1222222222222222 36678999999999998765
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=192.83 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=147.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
++|+|+||||+|+||++++++|+++|++|++++| +...... ...+... .+.++.++.+|++|.+++.+++++
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR-KMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 4432221 1222110 034789999999999999888764
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|+|||+||.... ...+.+...+++|+.++.++++++.+. ...++||++||.+++.+.
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 171 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------- 171 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence 5999999996432 233556789999999999998877643 114799999998654332
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC-CCCcHHHHHHHHhcCccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ-LAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+ +|++++++|||.++++..... ...... ...... ..+..
T Consensus 172 ------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~-~~p~~ 236 (302)
T 1w6u_A 172 ------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF--EKEMIG-RIPCG 236 (302)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH--HHHHHT-TCTTS
T ss_pred ------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh--HHHHHh-cCCcC
Confidence 13356999999999999999887 699999999999999732211 111111 111111 11222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+++++|+|+++++++
T Consensus 237 -----~~~~~~dva~~~~~l~ 252 (302)
T 1w6u_A 237 -----RLGTVEELANLAAFLC 252 (302)
T ss_dssp -----SCBCHHHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHHc
Confidence 6889999999988763
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=187.17 Aligned_cols=205 Identities=14% Similarity=0.133 Sum_probs=151.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|++|||||+|+||++++++|+++|++|+++ .| +....... ..+. ..+.++.++.+|++|.++++++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR-SKKAALETAEEIE---KLGVKVLVVKANVGQPAKIKEMFQQIDE 78 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHH---TTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999987 56 54333222 2222 224579999999999999988876
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ ..+||++||.+.+.+.
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~--------- 148 (258)
T 3oid_A 79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYL--------- 148 (258)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCC---------
Confidence 46999999986432 33455677899999999999888754 34 5799999997654332
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++........ ........ ...+..
T Consensus 149 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~p~~ 212 (258)
T 3oid_A 149 -------------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR--EDLLEDAR-QNTPAG 212 (258)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH--HHHHHHHH-HHCTTS
T ss_pred -------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC--HHHHHHHH-hcCCCC
Confidence 133569999999999999998874 89999999999999864433211 11111111 112222
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+++|+|+++++|+
T Consensus 213 -----r~~~~~dva~~v~~L~ 228 (258)
T 3oid_A 213 -----RMVEIKDMVDTVEFLV 228 (258)
T ss_dssp -----SCBCHHHHHHHHHHHT
T ss_pred -----CCcCHHHHHHHHHHHh
Confidence 7899999999998864
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=188.38 Aligned_cols=204 Identities=17% Similarity=0.202 Sum_probs=149.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++|+.+..... ...+.. .+.+++++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA---DGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999952332221 122221 13478999999999999998887
Q ss_pred --cccEEEEeeec-cCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc--------CCccEEEEEecceeee-cCCCCc
Q 026091 78 --GCTGVIHVAAP-IDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS--------GTVKRVVYTSSASTVH-FSGKDV 140 (243)
Q Consensus 78 --~~d~vi~~a~~-~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~i~~Ss~~~~~-~~~~~~ 140 (243)
++|+|||+||. ... ...+.+...+++|+.++.++++++.+. +..++||++||...+. +.
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 158 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG---- 158 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC----
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC----
Confidence 78999999996 322 223446678999999999998876542 1126899999976543 11
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
++...|+.+|.+.|.+++.++.+. |++++++|||.++++...... .........
T Consensus 159 ------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~- 215 (258)
T 3afn_B 159 ------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT----QDVRDRISN- 215 (258)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC----HHHHHHHHT-
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC----HHHHHHHhc-
Confidence 133569999999999999988764 899999999999998644321 111222211
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..++ .++++++|+|++++++
T Consensus 216 ~~~~-----~~~~~~~dva~~~~~l 235 (258)
T 3afn_B 216 GIPM-----GRFGTAEEMAPAFLFF 235 (258)
T ss_dssp TCTT-----CSCBCGGGTHHHHHHH
T ss_pred cCCC-----CcCCCHHHHHHHHHHH
Confidence 1122 2789999999998875
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=189.58 Aligned_cols=203 Identities=18% Similarity=0.131 Sum_probs=148.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +....... ..+... .+.++.++.+|++|.+++.++++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT-SGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999 54332221 111110 13478999999999999998886
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||..++.+.+
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------- 152 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV--------- 152 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC---------
Confidence 68999999997543 2334566889999999977776544 445 68999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++++ +|++++++|||.++++..... . .......... .+.
T Consensus 153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~-~~~-- 212 (248)
T 2pnf_A 153 -------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-S---EEIKQKYKEQ-IPL-- 212 (248)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-C---HHHHHHHHHT-CTT--
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-c---HHHHHHHHhc-CCC--
Confidence 2346999999999999998876 389999999999999864322 1 1111111111 112
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 213 ---~~~~~~~dva~~~~~l 228 (248)
T 2pnf_A 213 ---GRFGSPEEVANVVLFL 228 (248)
T ss_dssp ---SSCBCHHHHHHHHHHH
T ss_pred ---CCccCHHHHHHHHHHH
Confidence 2689999999998765
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-28 Score=193.77 Aligned_cols=206 Identities=20% Similarity=0.198 Sum_probs=149.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 222222 13478999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS------GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||.+.+.+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------- 167 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGV-------- 167 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCC--------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCC--------
Confidence 58999999996543 233456789999999999999987665 4 6799999997654322
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-H------HHHHHHH
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-V------RGTLAMV 214 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-~------~~~~~~~ 214 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++......... - .......
T Consensus 168 --------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T 2rhc_B 168 --------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI 233 (277)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred --------------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH
Confidence 12356999999999999999877 3899999999999987421100000 0 0000001
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ... ....+++++|+|++++++
T Consensus 234 ~-~~~-----p~~r~~~~~dvA~~v~~l 255 (277)
T 2rhc_B 234 T-ARV-----PIGRYVQPSEVAEMVAYL 255 (277)
T ss_dssp H-HHS-----TTSSCBCHHHHHHHHHHH
T ss_pred H-hcC-----CCCCCcCHHHHHHHHHHH
Confidence 0 011 123689999999999876
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=187.78 Aligned_cols=210 Identities=15% Similarity=0.136 Sum_probs=148.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+... ..+.++.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSR-NREKLEAAASRIASL-VSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-STTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc-CCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999 5433222 1212110 012278999999999999998887
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++.+++. +.+ .++||++||..++.+.+
T Consensus 83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 152 (260)
T 2z1n_A 83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ--------- 152 (260)
T ss_dssp TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC---------
Confidence 58999999996432 2345677899999999977777654 445 68999999987553221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC------cHHHH-HHHHhc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG------SVRGT-LAMVMG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~------~~~~~-~~~~~~ 216 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++++........ ..... .....
T Consensus 153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~- 218 (260)
T 2z1n_A 153 -------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA- 218 (260)
T ss_dssp -------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH-
Confidence 23469999999999999998774 89999999999999864311000 00000 00010
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...+. ..+.+++|+|+++++++
T Consensus 219 ~~~p~-----~r~~~~~dva~~v~~l~ 240 (260)
T 2z1n_A 219 SRIPM-----GRVGKPEELASVVAFLA 240 (260)
T ss_dssp -CCTT-----SSCCCHHHHHHHHHHHT
T ss_pred hcCCC-----CCccCHHHHHHHHHHHh
Confidence 11111 26889999999998764
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-27 Score=186.88 Aligned_cols=207 Identities=15% Similarity=0.106 Sum_probs=149.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+....... .....+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGR-TKEKLEEAKL--EIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 5433322221 112234579999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+...+||++||...+.+.+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 151 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP---------- 151 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC----------
Confidence 57999999996432 33456778999999999999988743 22257999999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .....+... ...+.
T Consensus 152 ------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-~~~~~~~~~-~~~p~-- 215 (257)
T 3imf_A 152 ------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-SEEMAKRTI-QSVPL-- 215 (257)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHH-TTSTT--
T ss_pred ------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-CHHHHHHHH-hcCCC--
Confidence 2346999999999999988754 489999999999999854322100 000001111 11122
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 216 ---~r~~~pedvA~~v~~L 231 (257)
T 3imf_A 216 ---GRLGTPEEIAGLAYYL 231 (257)
T ss_dssp ---CSCBCHHHHHHHHHHH
T ss_pred ---CCCcCHHHHHHHHHHH
Confidence 2689999999999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=187.72 Aligned_cols=204 Identities=15% Similarity=0.141 Sum_probs=148.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+|+||||+|+||++++++|+++|++|++++|+..........+ +.++.++.+|++|.+++.++++
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3445689999999999999999999999999999999543222111111 3478999999999999998887
Q ss_pred ----cccEEEEeeeccCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhc----------CCccEEEEEeccee
Q 026091 78 ----GCTGVIHVAAPIDI-----------HGKEPEEVIIQRAVSGTIGILKSCLKS----------GTVKRVVYTSSAST 132 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~i~~Ss~~~ 132 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||..+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~ 160 (265)
T 2o23_A 82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAA 160 (265)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHH
T ss_pred HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhh
Confidence 78999999997543 123456788999999999999988765 4 578999999875
Q ss_pred eecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHH
Q 026091 133 VHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRG 209 (243)
Q Consensus 133 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~ 209 (243)
+.+.+ +...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........
T Consensus 161 ~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---- 214 (265)
T 2o23_A 161 FEGQV----------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK---- 214 (265)
T ss_dssp HHCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------
T ss_pred cCCCC----------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH----
Confidence 53321 2356999999999999998876 489999999999998853321110
Q ss_pred HHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 210 TLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
........ .++ ...+++++|+|++++++
T Consensus 215 ~~~~~~~~-~~~----~~~~~~~~dva~~~~~l 242 (265)
T 2o23_A 215 VCNFLASQ-VPF----PSRLGDPAEYAHLVQAI 242 (265)
T ss_dssp --CHHHHT-CSS----SCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHc-CCC----cCCCCCHHHHHHHHHHH
Confidence 00011111 111 02688999999998875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=189.21 Aligned_cols=204 Identities=16% Similarity=0.101 Sum_probs=151.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| ..........+.. .+.++.++.+|++|.+++.++.+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIAD---GGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STHHHHHHHHHHT---TTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-HHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999997 5433323333322 24578999999999998887754
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++. +.+ .++||++||..++.+.+
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~----------- 173 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR----------- 173 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-----------
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC-----------
Confidence 68999999997543 2345677899999999999998764 345 57999999987553321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+...|+.+|.+.+.+.+.++.+ +|++++.++||.++++........ -........ ..+.
T Consensus 174 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~--~~p~---- 235 (273)
T 3uf0_A 174 -----------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD-DERAAEITA--RIPA---- 235 (273)
T ss_dssp -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-HHHHHHHHH--HSTT----
T ss_pred -----------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-HHHHHHHHh--cCCC----
Confidence 2356999999999999999887 589999999999999853221100 011111111 1122
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 236 -~r~~~pedva~~v~~L 251 (273)
T 3uf0_A 236 -GRWATPEDMVGPAVFL 251 (273)
T ss_dssp -SSCBCGGGGHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHH
Confidence 2789999999999876
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=189.96 Aligned_cols=204 Identities=15% Similarity=0.118 Sum_probs=151.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.++++++++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ---AGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 568999999999999999999999999999999943322222222222 24678999999999999888876
Q ss_pred -cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 -GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 155 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV----------- 155 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT-----------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC-----------
Confidence 68999999997543 23355678899999999999998753 34 57999999987543321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++....... ........ ...++.
T Consensus 156 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~-~~~p~~--- 217 (256)
T 3gaf_A 156 -----------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIERAML-KHTPLG--- 217 (256)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHHHHHH-TTCTTS---
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHHHHHH-hcCCCC---
Confidence 23569999999999999998774 8999999999999874221110 11111111 112222
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 218 --r~~~~~dva~~~~~L 232 (256)
T 3gaf_A 218 --RLGEAQDIANAALFL 232 (256)
T ss_dssp --SCBCHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHH
Confidence 789999999999876
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=190.87 Aligned_cols=210 Identities=19% Similarity=0.093 Sum_probs=151.1
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
..++|+|+||||+|+||++++++|+++|++|++++|++...... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK---LGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 33568999999999999999999999999999999944332221 122222 24578999999999999988887
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceee-ecCCCCcccccCC
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTV-HFSGKDVDMLDET 146 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~-~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+.- +-++||++||.+++ .+.
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 164 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---------- 164 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC----------
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC----------
Confidence 68999999997542 2334456889999999999999887762 01699999998755 221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC----C-----CCcHHHHHHHH
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ----L-----AGSVRGTLAMV 214 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~----~-----~~~~~~~~~~~ 214 (243)
++...|+.+|.+.|.+++.++.+. |++++++|||.++++..... . ...........
T Consensus 165 ------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (274)
T 1ja9_A 165 ------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL 232 (274)
T ss_dssp ------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH
T ss_pred ------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHH
Confidence 123469999999999999998774 89999999999998743210 0 00001111111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ... ...++++++|+|++++++
T Consensus 233 ~-~~~-----~~~~~~~~~dva~~i~~l 254 (274)
T 1ja9_A 233 A-NMN-----PLKRIGYPADIGRAVSAL 254 (274)
T ss_dssp H-HTS-----TTSSCBCHHHHHHHHHHH
T ss_pred H-hcC-----CCCCccCHHHHHHHHHHH
Confidence 1 111 123789999999998875
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=191.07 Aligned_cols=207 Identities=16% Similarity=0.154 Sum_probs=150.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|+++|++|++++| +.+........ .+.++.++++|++|.++++++++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV-NEDAAVRVANE-----IGSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHH-----HCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH-----hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 3345689999999999999999999999999999999 54332222211 13478999999999999888876
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||..++.+.+
T Consensus 97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 168 (277)
T 4dqx_A 97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIA------- 168 (277)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCT-------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCC-------
Confidence 58999999996543 23455677889999999999888754 33 46999999977543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCcc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNRE 219 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~ 219 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++...... ............ ...
T Consensus 169 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~ 232 (277)
T 4dqx_A 169 ---------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN-ARA 232 (277)
T ss_dssp ---------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH-TTS
T ss_pred ---------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHH-hcC
Confidence 23569999999999999998774 899999999999887411000 000111111111 112
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. ..+.+++|+|++++++
T Consensus 233 ~~-----~r~~~pedvA~~v~~L 250 (277)
T 4dqx_A 233 VM-----DRMGTAEEIAEAMLFL 250 (277)
T ss_dssp TT-----CSCBCHHHHHHHHHHH
T ss_pred cc-----cCCcCHHHHHHHHHHH
Confidence 22 2688999999999876
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=194.42 Aligned_cols=193 Identities=17% Similarity=0.187 Sum_probs=142.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+|+|+||||||+||++++++|+++| ++|++++| ++.... ...+.. .+++++.+|++|++++.++++++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R-~~~~~~-~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi 77 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKA-AKELRL-----QGAEVVQGDQDDQVIMELALNGAYATF 77 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES-CTTSHH-HHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc-CCCCHH-HHHHHH-----CCCEEEEecCCCHHHHHHHHhcCCEEE
Confidence 5799999999999999999999999 99999999 443221 111111 368999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+++..... ..+.|+.++.+++++|++.+ +++||+.|+.+++... +. .+...
T Consensus 78 ~~a~~~~~~-------~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~--------~~------------~~~~~ 129 (299)
T 2wm3_A 78 IVTNYWESC-------SQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT--------AG------------RLAAA 129 (299)
T ss_dssp ECCCHHHHT-------CHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT--------TT------------SCCCH
T ss_pred EeCCCCccc-------cchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC--------CC------------cccCc
Confidence 999753211 13467889999999999999 9999998776543211 11 12356
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc--cccc-cccCcCceeHHHHHHhhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR--EEYS-MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~a~~ 240 (243)
|+.+|..+|.+++. +|++++++||+.+||+......... ...+.. ..++ +++.++++|++|+|+++.
T Consensus 130 y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~ 199 (299)
T 2wm3_A 130 HFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQK------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVL 199 (299)
T ss_dssp HHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEE------CTTSSSEEECCCCTTSCEEEECGGGHHHHHH
T ss_pred hhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcc------cCCCCEEEEEecCCCCccceecHHHHHHHHH
Confidence 99999999998875 5999999999999997533111110 001111 1122 366789999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 200 ~~ 201 (299)
T 2wm3_A 200 SL 201 (299)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=189.96 Aligned_cols=204 Identities=22% Similarity=0.159 Sum_probs=150.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++|+..........+... ...++.++++|++|.+++.++++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL--GAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS--SSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh--CCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999433222222222221 12578999999999998888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceee-ecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTV-HFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~-~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++. +.+ .++||++||.... .+.
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~---------- 186 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY---------- 186 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCC----------
Confidence 46999999997543 2345567899999999999999874 455 6799999997642 221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+....|+.+|.+.+.+.+.++.+ +|+++++++||.++++...... ......... ..++.
T Consensus 187 ------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~-~~p~~- 248 (293)
T 3rih_A 187 ------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMAR-SIPMG- 248 (293)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHT-TSTTS-
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHh-cCCCC-
Confidence 12356999999999999999877 5899999999999998432221 111122111 12222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 249 ----r~~~p~dvA~~v~fL 263 (293)
T 3rih_A 249 ----MLGSPVDIGHLAAFL 263 (293)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 678899999998876
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-27 Score=187.58 Aligned_cols=201 Identities=14% Similarity=0.133 Sum_probs=151.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|+++.|++.......... ....+.++.++.+|++|.++++++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAA--IAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999998554333222211 11124578999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+.+.+.+
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 173 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNP---------- 173 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC----------
Confidence 58999999997543 23456778999999999999988644 34 56999999977554331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... .. ... ....++.
T Consensus 174 ------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~---~~~-~~~~p~~-- 231 (269)
T 4dmm_A 174 ------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AA---EKL-LEVIPLG-- 231 (269)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HH---HHH-GGGCTTS--
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cH---HHH-HhcCCCC--
Confidence 2356999999999999999876 489999999999999853211 11 111 1222222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 232 ---r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 232 ---RYGEAAEVAGVVRFL 246 (269)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHH
Confidence 789999999999876
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-27 Score=184.96 Aligned_cols=204 Identities=16% Similarity=0.158 Sum_probs=143.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..+.... .+... +.++.++++|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--HHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--HHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999954132221 12221 3478999999999999888864
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.++ +++.+ .++||++||..++.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 148 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI----------- 148 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-----------
Confidence 68999999997543 23455678899999998888887 44555 6899999998755332
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.................. .+
T Consensus 149 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~---- 210 (249)
T 2ew8_A 149 -----------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML---QA---- 210 (249)
T ss_dssp -----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT---SS----
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh---Cc----
Confidence 12356999999999999999877 4899999999999998533110000000000000 11
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
...+.+++|+|+++++++
T Consensus 211 -~~~~~~p~dva~~~~~l~ 228 (249)
T 2ew8_A 211 -IPRLQVPLDLTGAAAFLA 228 (249)
T ss_dssp -SCSCCCTHHHHHHHHHHT
T ss_pred -cCCCCCHHHHHHHHHHHc
Confidence 126899999999998764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=191.53 Aligned_cols=213 Identities=17% Similarity=0.109 Sum_probs=149.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
++|+++||||+|+||++++++|+++|++|++++| +........ ... +.+++++.+|++|.+++.++++ ++|
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVR-DTRKGEAAA--RTM---AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--TTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999999 543322221 111 3578999999999999999997 579
Q ss_pred EEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhc
Q 026091 81 GVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKL 157 (243)
Q Consensus 81 ~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 157 (243)
++||+||.... ...+.+...+++|+.++.++++++.+.. .++||++||.+.+.+.........+..+
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~--------- 158 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRR--------- 158 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSC---------
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccC---------
Confidence 99999997543 2345566899999999999999999988 7899999998765443211111111111
Q ss_pred CCCCchHHhhHHHHHHHHHHHHHHc---C--ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeH
Q 026091 158 DIWGKSYKLSKTLAERAALEFAEEH---G--LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHI 232 (243)
Q Consensus 158 ~~~~~~y~~sK~~~e~~~~~~~~~~---g--i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 232 (243)
.++...|+.||.+.+.+.+.++.+. | ++++.++||.+.++.......... ....... ..+-..++
T Consensus 159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~------~~~~~~~~ 228 (291)
T 3rd5_A 159 YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----DALMSAA------TRVVATDA 228 (291)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----HHHHHHH------HHHHhCCH
Confidence 1234569999999999999988774 5 999999999999886443211111 1111100 11123458
Q ss_pred HHHHHhhhcc
Q 026091 233 DDVARAHIFF 242 (243)
Q Consensus 233 ~Dva~a~~~~ 242 (243)
+|+|++++++
T Consensus 229 ~~~A~~~~~l 238 (291)
T 3rd5_A 229 DFGARQTLYA 238 (291)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999888775
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=184.10 Aligned_cols=200 Identities=17% Similarity=0.139 Sum_probs=143.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
+.|+|+||||+|+||++++++|+++|++|++++| +.+........ . ..++.++.+|++|.+++.++++ ++|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGS-NEEKLKSLGNA--L---KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--H---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHH--h---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 5689999999999999999999999999999999 54433222211 1 2378999999999999999987 589
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
++||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 151 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNP-------------- 151 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCS--------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCC--------------
Confidence 99999997543 33456779999999999999887654 34 56999999987654331
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++....... ....... ...+. ..
T Consensus 152 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~-~~~~~-----~~ 213 (249)
T 3f9i_A 152 --------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE----KQREAIV-QKIPL-----GT 213 (249)
T ss_dssp --------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH----HHHHHHH-HHCTT-----CS
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH----HHHHHHH-hcCCC-----CC
Confidence 2356999999999999999876 48999999999999986433211 1111111 11122 27
Q ss_pred ceeHHHHHHhhhcc
Q 026091 229 MVHIDDVARAHIFF 242 (243)
Q Consensus 229 ~i~v~Dva~a~~~~ 242 (243)
+.+++|+|++++++
T Consensus 214 ~~~~~dva~~~~~l 227 (249)
T 3f9i_A 214 YGIPEDVAYAVAFL 227 (249)
T ss_dssp CBCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 89999999998875
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=188.02 Aligned_cols=203 Identities=18% Similarity=0.163 Sum_probs=130.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|..++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI-NAEAAEAVAKQIVA---DGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999 4433222 222222 24578999999999999988886
Q ss_pred -----cccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCc
Q 026091 78 -----GCTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
++|++||+||.... ...+.+...+++|+.++.++.+.+. +.+ .++||++||.+++.
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------ 153 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL------ 153 (253)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC------
Confidence 68999999987321 2345567889999999777766554 445 57999999987541
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.++++........ ....... .
T Consensus 154 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~-~ 210 (253)
T 3qiv_A 154 -------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK---EMVDDIV-K 210 (253)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------
T ss_pred -------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH---HHHHHHh-c
Confidence 11349999999999999999885 89999999999999854332111 0111111 1
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+. ..+.+++|+|++++++
T Consensus 211 ~~~~-----~~~~~~~dva~~~~~l 230 (253)
T 3qiv_A 211 GLPL-----SRMGTPDDLVGMCLFL 230 (253)
T ss_dssp --------------CCHHHHHHHHH
T ss_pred cCCC-----CCCCCHHHHHHHHHHH
Confidence 1112 2677899999998875
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=188.12 Aligned_cols=212 Identities=16% Similarity=0.082 Sum_probs=152.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|++.|++|++++| +.+.... ...+ ...+.++.++++|++|.+++.++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGR-TRTEVEEVADEI---VGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHH---TTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 4433222 2222 2235678999999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... ...+.+...+++|+.++.++++++ ++.+ .++||++||.+++...+
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~-------- 173 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT-------- 173 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC--------
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC--------
Confidence 58999999997432 233556788999999999999987 4455 57999999976442111
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH--hcCccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV--MGNREE 220 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~ 220 (243)
.++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++................. .....+
T Consensus 174 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p 241 (283)
T 3v8b_A 174 ------------TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVP 241 (283)
T ss_dssp ------------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCG
T ss_pred ------------CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCc
Confidence 013356999999999999999987 489999999999999865433111111000000 000011
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. ....+..++|+|+++++|+
T Consensus 242 ~---~~~r~~~pedvA~~v~fL~ 261 (283)
T 3v8b_A 242 I---TDGQPGRSEDVAELIRFLV 261 (283)
T ss_dssp G---GTTCCBCHHHHHHHHHHHT
T ss_pred c---ccCCCCCHHHHHHHHHHHc
Confidence 1 0126789999999998874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=188.19 Aligned_cols=206 Identities=17% Similarity=0.164 Sum_probs=148.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+.. ......+.. .+.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR---HGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999443 212222222 23478899999999999999887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++.+.+ ++.+ .++||++||.+++.+.+
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST---------- 146 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC----------
Confidence 78999999996542 234556789999999877776654 4556 68999999987543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHH---H----HHHhcC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGT---L----AMVMGN 217 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~---~----~~~~~~ 217 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++........ .... . ......
T Consensus 147 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 213 (255)
T 2q2v_A 147 ------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDD-RAANGGDPLQAQHDLLAE 213 (255)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHH-HHHHTCCHHHHHHHHHTT
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccc-ccccccchHHHHHHHHhc
Confidence 2346999999999999999887 489999999999999842210000 0000 0 111011
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+ ...+++++|+|+++++++
T Consensus 214 ~~p-----~~~~~~~~dvA~~~~~l~ 234 (255)
T 2q2v_A 214 KQP-----SLAFVTPEHLGELVLFLC 234 (255)
T ss_dssp TCT-----TCCCBCHHHHHHHHHHHT
T ss_pred cCC-----CCCCcCHHHHHHHHHHHh
Confidence 111 237899999999998764
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-27 Score=186.16 Aligned_cols=204 Identities=16% Similarity=0.165 Sum_probs=146.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCe-EEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL-QIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++ .++.+|++|.+++.++++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDR-EAAALDRAA--QEL---GAAVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence 4579999999999999999999999999999999 543322211 111 2356 889999999999988874
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++.+++. +.+ .++||++||.+++.+.+.
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~--------- 153 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRP--------- 153 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS---------
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCC---------
Confidence 68999999997543 1234456788999999887777654 445 689999999765432210
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
.+...|+.+|.+.|.+++.++.+. |++++++|||.++++........ .......... .+.
T Consensus 154 -----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~--- 216 (254)
T 2wsb_A 154 -----------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER--PELFETWLDM-TPM--- 216 (254)
T ss_dssp -----------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC--HHHHHHHHHT-STT---
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC--hHHHHHHHhc-CCC---
Confidence 122569999999999999998775 89999999999999843211000 0111111111 111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 217 --~~~~~~~dva~~~~~l 232 (254)
T 2wsb_A 217 --GRCGEPSEIAAAALFL 232 (254)
T ss_dssp --SSCBCHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHH
Confidence 2689999999998875
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-27 Score=187.15 Aligned_cols=205 Identities=20% Similarity=0.155 Sum_probs=149.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR-KQENVDRTVATLQG---EGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999 543322 1222222 23478899999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||.+++.+.
T Consensus 89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--------- 158 (260)
T 2zat_A 89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPF--------- 158 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC---------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCC---------
Confidence 68999999996421 2334567889999999999988765 345 6799999998765322
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+.++........ ....... ....+
T Consensus 159 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~-~~~~~-- 220 (260)
T 2zat_A 159 -------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARKEYM-KESLR-- 220 (260)
T ss_dssp -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHHHHH-HHHHT--
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHHHHH-HhcCC--
Confidence 123569999999999999998774 89999999999998753210000 0000001 11111
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...+++++|+|+++++++
T Consensus 221 ---~~~~~~~~dva~~v~~l~ 238 (260)
T 2zat_A 221 ---IRRLGNPEDCAGIVSFLC 238 (260)
T ss_dssp ---CSSCBCGGGGHHHHHHHT
T ss_pred ---CCCCCCHHHHHHHHHHHc
Confidence 236899999999998764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=186.56 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=143.8
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|+++|++|++++| +......... .. +.++.++.+|++|.++++++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR-DKAGAERVAG--EI---GDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHH--Hh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999 5543322221 11 3478999999999999888876
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-------CccEEEEEecceeeecCCCCc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-------TVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. ...+||++||.+.+.+.
T Consensus 79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 154 (261)
T 3n74_A 79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR---- 154 (261)
T ss_dssp HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC----
T ss_pred HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC----
Confidence 57999999997542 2345567889999999999988776542 12469999997654322
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++.................. .
T Consensus 155 ------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~ 215 (261)
T 3n74_A 155 ------------------PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFR-D 215 (261)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------
T ss_pred ------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHh-h
Confidence 12346999999999999999887 5899999999999998644332111111111111 1
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+ ...+++++|+|+++++++
T Consensus 216 ~~~-----~~~~~~~~dva~~~~~l~ 236 (261)
T 3n74_A 216 SIP-----MGRLLKPDDLAEAAAFLC 236 (261)
T ss_dssp -CT-----TSSCCCHHHHHHHHHHHT
T ss_pred cCC-----cCCCcCHHHHHHHHHHHc
Confidence 112 237899999999998764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=189.60 Aligned_cols=207 Identities=16% Similarity=0.147 Sum_probs=151.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +.+.. .....+.. .+.++.++.+|++|.+++.++++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR-DAKNVSAAVDGLRA---AGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 54332 22222222 24679999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh------cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK------SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+.+.+.+
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~------- 170 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM------- 170 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC-------
Confidence 57999999997543 23455678899999999999998765 34 57999999987543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC-------CCCcHHHHHHHH
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMV 214 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... ............
T Consensus 171 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (279)
T 3sju_A 171 ---------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERF 235 (279)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHH
T ss_pred ---------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHH
Confidence 2356999999999999999887 589999999999988732110 000111111222
Q ss_pred hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. ...+. ..+.+++|+|+++++|+
T Consensus 236 ~-~~~p~-----~r~~~pedvA~~v~~L~ 258 (279)
T 3sju_A 236 N-AKIPL-----GRYSTPEEVAGLVGYLV 258 (279)
T ss_dssp H-TTCTT-----SSCBCHHHHHHHHHHHT
T ss_pred H-hcCCC-----CCCCCHHHHHHHHHHHh
Confidence 1 11222 27899999999998864
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=187.96 Aligned_cols=202 Identities=17% Similarity=0.191 Sum_probs=145.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhhchh-hhhhcCCCCCCCeEE-EecCCCChhhHHHHhc----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQKRDL-SFLTNLPRASERLQI-FNADLNNPESFDAAIA---- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~---- 77 (243)
||+|+||||+|+||++++++|+++|++|+++ +| +.+..... ..+.. .+.++.. +.+|++|.++++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQ-NREKAEEVAEEARR---RGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESS-CHHHHHHHHHHHHH---TTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998 67 54332221 11221 1345666 8999999999888865
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++. +++.+ .++||++||...+.+.+
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------- 147 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP-------- 147 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS--------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC--------
Confidence 68999999997542 23345668899999996666554 44556 78999999976543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+.+.++++. |++++++|||.++++...... .......... .+.
T Consensus 148 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~-~~~- 207 (245)
T 2ph3_A 148 --------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP----QEVKEAYLKQ-IPA- 207 (245)
T ss_dssp --------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC----HHHHHHHHHT-CTT-
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC----HHHHHHHHhc-CCC-
Confidence 23469999999999999988774 899999999999998533211 1111111111 112
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+|+++++++
T Consensus 208 ----~~~~~~~dva~~~~~l~ 224 (245)
T 2ph3_A 208 ----GRFGRPEEVAEAVAFLV 224 (245)
T ss_dssp ----CSCBCHHHHHHHHHHHT
T ss_pred ----CCCcCHHHHHHHHHHHh
Confidence 26899999999988763
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=185.24 Aligned_cols=206 Identities=16% Similarity=0.100 Sum_probs=150.7
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+ |+||++++++|+++|++|++++|+. ........+... .....++++|++|.+++.++++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999 9999999999999999999999944 222222222221 1234789999999999988876
Q ss_pred ---cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.. +-++||++||.+.+.+.+
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 157 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------ 157 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC------
Confidence 57999999997542 3335567899999999999999998763 025899999976543221
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++++..... .. ........... .+
T Consensus 158 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~~-~p 218 (265)
T 1qsg_A 158 ----------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEAV-TP 218 (265)
T ss_dssp ----------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TT-HHHHHHHHHHH-ST
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cc-cHHHHHHHHhc-CC
Confidence 23469999999999999998774 89999999999999864322 11 11111111111 12
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+.+++|+|+++++++
T Consensus 219 ~~-----~~~~~~dva~~v~~l~ 236 (265)
T 1qsg_A 219 IR-----RTVTIEDVGNSAAFLC 236 (265)
T ss_dssp TS-----SCCCHHHHHHHHHHHT
T ss_pred CC-----CCCCHHHHHHHHHHHh
Confidence 22 6889999999998764
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-27 Score=188.31 Aligned_cols=218 Identities=20% Similarity=0.194 Sum_probs=152.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC-----------chhhchhhhhhcCCCCCCCeEEEecCCCChhhH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD-----------PEQKRDLSFLTNLPRASERLQIFNADLNNPESF 72 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 72 (243)
..|++|||||+|+||++++++|+++|++|++++|+. .+...... ......+.++.++++|++|.+++
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATV--KLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHH--HHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHH--HHHHhcCCeEEEEeCCCCCHHHH
Confidence 468999999999999999999999999999999842 11111111 11111245899999999999999
Q ss_pred HHHhc-------cccEEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCc
Q 026091 73 DAAIA-------GCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 73 ~~~~~-------~~d~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
.++++ ++|++||+||.... ...+.+...+++|+.++.++++++.+. ++..+||++||.+.+.+...
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-- 167 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-- 167 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--
Confidence 98886 68999999997544 234567789999999999999986553 22468999999875433210
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-c
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-G 216 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~ 216 (243)
. .++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... ....+..... .
T Consensus 168 -----~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~ 229 (278)
T 3sx2_A 168 -----A-----------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF--TREWLAKMAAAT 229 (278)
T ss_dssp -----S-----------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH--HHHHHHHHHHHC
T ss_pred -----C-----------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhh--HHHHHhhccchh
Confidence 0 0123469999999999999998774 799999999999998643211 0111111111 1
Q ss_pred Cc-cccccccCcCceeHHHHHHhhhccC
Q 026091 217 NR-EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~-~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ..+.......+++++|+|+++++++
T Consensus 230 ~~~~~~~~~~p~~~~~p~dvA~~v~~l~ 257 (278)
T 3sx2_A 230 DTPGAMGNAMPVEVLAPEDVANAVAWLV 257 (278)
T ss_dssp C--CTTSCSSSCSSBCHHHHHHHHHHHT
T ss_pred hhhhhhhhhcCcCcCCHHHHHHHHHHHh
Confidence 11 1111111257899999999998874
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.5e-27 Score=187.69 Aligned_cols=205 Identities=15% Similarity=0.179 Sum_probs=152.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++++|++|.++++++++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG---VGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 568999999999999999999999999999999943322222222222 24578999999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. +...+||++||.+.+.....
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------- 178 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------- 178 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---------
Confidence 68999999997543 234556778899999999999887654 21268999999765432210
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++...... . ..... ....++.
T Consensus 179 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~----~~~~~-~~~~p~~-- 239 (276)
T 3r1i_A 179 -----------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA-D----YHALW-EPKIPLG-- 239 (276)
T ss_dssp -----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG-G----GHHHH-GGGSTTS--
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch-H----HHHHH-HhcCCCC--
Confidence 12356999999999999999887 5899999999999998643221 1 11111 1122222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 240 ---r~~~pedvA~~v~fL 254 (276)
T 3r1i_A 240 ---RMGRPEELTGLYLYL 254 (276)
T ss_dssp ---SCBCGGGSHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=189.14 Aligned_cols=207 Identities=17% Similarity=0.176 Sum_probs=152.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +.+...... ......+.++.++.+|++|.+++.++++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR-NGNALAELT--DEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHH--HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 543322221 1122235678999999999999988876
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceee-ecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTV-HFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~-~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+. + ..+||++||..++ .+.
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 153 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGF--------- 153 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCC---------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCC---------
Confidence 58999999996532 334567789999999999999887653 3 4699999997654 111
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+.++.................. ...++.
T Consensus 154 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~p~~ 219 (280)
T 3tox_A 154 -------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVE-GLHALK 219 (280)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHH-TTSTTS
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHh-ccCccC
Confidence 123569999999999999998774 899999999999998644321111111111221 112222
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 220 -----r~~~pedvA~~v~~L 234 (280)
T 3tox_A 220 -----RIARPEEIAEAALYL 234 (280)
T ss_dssp -----SCBCHHHHHHHHHHH
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 689999999999876
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=184.64 Aligned_cols=192 Identities=19% Similarity=0.174 Sum_probs=146.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------G 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~ 78 (243)
+|+|+||||+|+||++++++|+++|++|++++| +.. . ..+.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 66 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDL-RRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAP 66 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcc-Ccc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 579999999999999999999999999999999 432 1 245899999999999999887 6
Q ss_pred ccEEEEeeeccCCC-----CCC----hHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEEecceeeecCCCCc
Q 026091 79 CTGVIHVAAPIDIH-----GKE----PEEVIIQRAVSGTIGILKSCLKSG---------TVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 79 ~d~vi~~a~~~~~~-----~~~----~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
+|++||+||..... ..+ .+...+++|+.++.++++++.+.. ..++||++||..++.+.+
T Consensus 67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 143 (242)
T 1uay_A 67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI--- 143 (242)
T ss_dssp EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence 89999999875431 112 677899999999999999887642 123999999987653321
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
+...|+.+|.+.+.+.+.++.+. |++++++|||.++++...... ..+.......
T Consensus 144 -------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~ 200 (242)
T 1uay_A 144 -------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKASLAAQ 200 (242)
T ss_dssp -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHHHHTT
T ss_pred -------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc----hhHHHHHHhh
Confidence 33569999999999999988764 899999999999998543221 1111222211
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.++ ...+++++|+|++++++
T Consensus 201 -~~~----~~~~~~~~dva~~~~~l 220 (242)
T 1uay_A 201 -VPF----PPRLGRPEEYAALVLHI 220 (242)
T ss_dssp -CCS----SCSCCCHHHHHHHHHHH
T ss_pred -CCC----cccCCCHHHHHHHHHHH
Confidence 122 02689999999998875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=193.15 Aligned_cols=178 Identities=17% Similarity=0.218 Sum_probs=133.6
Q ss_pred eEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+||||||+||++++++|+++ |++|++++| ++..... +.. .+++++.+|++|++++.++++++|+|||
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~---~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQA---LAA-----QGITVRQADYGDEAALTSALQGVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTCHH---HHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc-ChHhhhh---hhc-----CCCeEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 5899999999999999999998 999999999 4432211 111 3688999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+|+... +.|+.++.+++++|++.+ +++|||+||.+++ .. + .+|
T Consensus 72 ~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~-----------------------~-~~y 114 (286)
T 2zcu_A 72 ISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-TS-----------------------P-LGL 114 (286)
T ss_dssp CC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTTT-TC-----------------------C-STT
T ss_pred eCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CC-----------------------c-chh
Confidence 998521 147889999999999999 9999999997654 10 0 249
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cccCcCceeHHHHHHhhhcc
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.+|.++|.+++. +|++++++||+.++++.. ..+. ....+....+. +++.++++|++|+|++++.+
T Consensus 115 ~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 181 (286)
T 2zcu_A 115 ADEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----ASAP---AALEHGVFIGAAGDGKIASATRADYAAAAARV 181 (286)
T ss_dssp HHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----TTHH---HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----HHhH---HhhcCCceeccCCCCccccccHHHHHHHHHHH
Confidence 9999999998865 699999999987776531 1122 22222222232 36678999999999998764
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=182.78 Aligned_cols=203 Identities=16% Similarity=0.152 Sum_probs=149.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++|++.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK---LGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999844332221 122221 13478999999999999988886
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++. +.+ .++||++||.+.+.+.+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 149 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP--------- 149 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC---------
Confidence 68999999997543 2345567899999999887776654 345 68999999986543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........... .... ..+..
T Consensus 150 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~-~~p~~- 210 (246)
T 2uvd_A 150 -------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKA----EMLK-LIPAA- 210 (246)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHH----HHHH-TCTTC-
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHH----HHHh-cCCCC-
Confidence 2346999999999999988876 489999999999998864332111111 1111 11122
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 211 ----~~~~~~dvA~~~~~l 225 (246)
T 2uvd_A 211 ----QFGEAQDIANAVTFF 225 (246)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 689999999998875
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=184.50 Aligned_cols=203 Identities=14% Similarity=0.087 Sum_probs=140.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA---AGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 3568999999999999999999999999999999943322222222222 24578999999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||.+.+.+.+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 150 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGS---------- 150 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCT----------
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCC----------
Confidence 57999999997543 33456778999999999999887643 44 57999999987553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccE-EEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDL-VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~-~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+. |+++ +++.||.+.++.......... .... ..
T Consensus 151 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~----~~~~-~~----- 208 (252)
T 3h7a_A 151 ------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF----GKDA-LA----- 208 (252)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh----hhhh-hc-----
Confidence 23569999999999999998774 8999 899999998875433211110 0000 00
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
... .+++++|+|++++++
T Consensus 209 ~~~-~~~~pedvA~~~~~l 226 (252)
T 3h7a_A 209 NPD-LLMPPAAVAGAYWQL 226 (252)
T ss_dssp ------CCHHHHHHHHHHH
T ss_pred CCc-cCCCHHHHHHHHHHH
Confidence 111 389999999999876
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=183.82 Aligned_cols=199 Identities=15% Similarity=0.130 Sum_probs=139.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|+++|++|++++| +... .. .++.++.+|++|.+++.++++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~-------~~-----~~~~~~~~D~~d~~~~~~~~~~~~ 69 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ-AFTQ-------EQ-----YPFATEVMDVADAAQVAQVCQRLL 69 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CCCS-------SC-----CSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-chhh-------hc-----CCceEEEcCCCCHHHHHHHHHHHH
Confidence 4455789999999999999999999999999999999 4321 01 137889999999999998886
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||.+++.+.
T Consensus 70 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------- 140 (250)
T 2fwm_X 70 AETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPR-------- 140 (250)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC--------
Confidence 68999999997543 233557789999999999999887 4445 6799999998654322
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhc----
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMG---- 216 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~---- 216 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++........ ..... ....
T Consensus 141 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~ 204 (250)
T 2fwm_X 141 --------------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFGEQ 204 (250)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------
T ss_pred --------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhhhhhc
Confidence 13356999999999999999877 489999999999999864321100 00000 0000
Q ss_pred --CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 --NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 --~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+. ..+.+++|+|++++++
T Consensus 205 ~~~~~p~-----~~~~~p~dvA~~v~~l 227 (250)
T 2fwm_X 205 FKLGIPL-----GKIARPQEIANTILFL 227 (250)
T ss_dssp ----------------CHHHHHHHHHHH
T ss_pred ccccCCC-----CCCcCHHHHHHHHHHH
Confidence 01111 2578999999998875
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=181.05 Aligned_cols=210 Identities=15% Similarity=0.107 Sum_probs=155.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|.++.|+++||||++.||++++++|++.|++|++++| +.+.. +..+.+.. .+.++.++++|++|+++++++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~-~~~~~~~~~~~i~~---~g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL-LEDRLNQIVQELRG---MGKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999 54333 22222322 35688999999999999988876
Q ss_pred -----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccc
Q 026091 78 -----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++|||||.... .+.+.|...+++|+.++..+.+++.+ .+ -.+||++||.+...+.+
T Consensus 79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~----- 152 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGF----- 152 (254)
T ss_dssp HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSS-----
T ss_pred HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCC-----
Confidence 47999999996432 34567888999999999988876554 34 46999999987543321
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+...+.+.++.+ +||+++.+.||.|..+.........-... +.......
T Consensus 153 -----------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~-~~~~~~~~ 214 (254)
T 4fn4_A 153 -----------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGM-RTLTKLMS 214 (254)
T ss_dssp -----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHH-HHHHHHHT
T ss_pred -----------------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHH-HHHHhcCC
Confidence 2346999999999999999877 48999999999999886443322221111 11111112
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+.. .+...+|+|++++||+
T Consensus 215 ~~~-----R~g~pediA~~v~fLa 233 (254)
T 4fn4_A 215 LSS-----RLAEPEDIANVIVFLA 233 (254)
T ss_dssp TCC-----CCBCHHHHHHHHHHHH
T ss_pred CCC-----CCcCHHHHHHHHHHHh
Confidence 222 6788999999998873
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=188.14 Aligned_cols=214 Identities=18% Similarity=0.161 Sum_probs=151.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch---------hhchhhhh-hcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE---------QKRDLSFL-TNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
+.|+++||||+|+||++++++|+++|++|++++|+.+. ..+.+..+ ......+.++.++++|++|.++++
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 56899999999999999999999999999999983110 11111111 111223567899999999999998
Q ss_pred HHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCC
Q 026091 74 AAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~ 137 (243)
++++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+. +...+||++||..++.+.+
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 173 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP 173 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC
Confidence 8876 58999999997543 244567788999999999999887543 2246899999977553321
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.++++..... .........
T Consensus 174 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~ 228 (280)
T 3pgx_A 174 ----------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE---AMMEIFARH 228 (280)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH---HHHHHHHHC
T ss_pred ----------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh---hhhhhhhcC
Confidence 2356999999999999999887 689999999999999854321 011011100
Q ss_pred hcCccc--cccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREE--YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~--~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...... ........+++++|+|+++++|
T Consensus 229 ~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L 258 (280)
T 3pgx_A 229 PSFVHSFPPMPVQPNGFMTADEVADVVAWL 258 (280)
T ss_dssp GGGGGGSCCBTTBCSSCBCHHHHHHHHHHH
T ss_pred chhhhhhhhcccCCCCCCCHHHHHHHHHHH
Confidence 000011 1111122589999999999876
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-26 Score=182.89 Aligned_cols=205 Identities=18% Similarity=0.155 Sum_probs=152.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+....... .. +.++.++.+|++|.+++.++++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR-NESNIARIRE--EF---GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 5433322221 11 3478999999999998887765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+.- +..+||++||.+.+.+.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 147 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP------------- 147 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-------------
Confidence 57999999997543 2445677899999999999999998752 135899999987553331
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC-CCCc-HHHHHHHHhcCcccccccc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ-LAGS-VRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 225 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++..... .... ...+.... ....+..
T Consensus 148 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~p~~--- 214 (255)
T 4eso_A 148 ---------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLG-DNITPMK--- 214 (255)
T ss_dssp ---------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHH-HHHSTTS---
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHH-hccCCCC---
Confidence 23569999999999999998874 89999999999999864332 1111 11111111 1112222
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 215 --r~~~pedvA~~v~~L 229 (255)
T 4eso_A 215 --RNGTADEVARAVLFL 229 (255)
T ss_dssp --SCBCHHHHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=186.17 Aligned_cols=207 Identities=19% Similarity=0.140 Sum_probs=150.8
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+|+||||+|+||++++++|+++|++|++++|+.....+...... ...+.++.++.+|++|.+++.++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNEL--EEKGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 33456899999999999999999999999999999995544332222111 1124578999999999999888876
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++++.+.+ .+ .++||++||...+.+.+
T Consensus 103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 174 (271)
T 4iin_A 103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNM------- 174 (271)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-------
T ss_pred HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCC-------
Confidence 68999999997543 23456778999999999998887654 34 57999999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ .... .....+
T Consensus 175 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~-~~~~~~- 233 (271)
T 4iin_A 175 ---------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----LKAD-YVKNIP- 233 (271)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGCT-
T ss_pred ---------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----HHHH-HHhcCC-
Confidence 3356999999999999999877 589999999999998753322111 1111 111112
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+.+++|+|++++++
T Consensus 234 ----~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 234 ----LNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp ----TCSCBCHHHHHHHHHHH
T ss_pred ----cCCCcCHHHHHHHHHHH
Confidence 23788999999999876
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-26 Score=184.63 Aligned_cols=206 Identities=14% Similarity=0.104 Sum_probs=150.0
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+ |+||++++++|+++|++|++++| +.........+... ..++.++.+|++|.+++.++++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYA-TPKLEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 45799999999 99999999999999999999999 44322223333221 1247889999999999888876
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.. +.++||++||.+.+.+.+
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 169 (285)
T 2p91_A 96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP------ 169 (285)
T ss_dssp HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT------
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC------
Confidence 57999999996531 2335567899999999999999988763 126999999976543221
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++++..... .. .......... ..+
T Consensus 170 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~-~~p 230 (285)
T 2p91_A 170 ----------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TG-FHLLMEHTTK-VNP 230 (285)
T ss_dssp ----------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TT-HHHHHHHHHH-HST
T ss_pred ----------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cc-hHHHHHHHHh-cCC
Confidence 23469999999999999988774 89999999999999864322 11 1111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+.+++|+|+++++++
T Consensus 231 ~~-----~~~~~~dva~~~~~l~ 248 (285)
T 2p91_A 231 FG-----KPITIEDVGDTAVFLC 248 (285)
T ss_dssp TS-----SCCCHHHHHHHHHHHT
T ss_pred CC-----CCcCHHHHHHHHHHHc
Confidence 22 5789999999998764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=186.82 Aligned_cols=205 Identities=18% Similarity=0.172 Sum_probs=141.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++|++.+..... ..+.. .+.++.++++|++|.+++.++++
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG---LGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH---TTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999997455433222 22222 24579999999999999888886
Q ss_pred --cccEEEEeeeccC--C-----CCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCccc
Q 026091 78 --GCTGVIHVAAPID--I-----HGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 --~~d~vi~~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++||+||... . .+.+.+...+++|+.++.++++++.+.. ...+||++||.+++.+.+
T Consensus 105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----- 179 (280)
T 4da9_A 105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP----- 179 (280)
T ss_dssp HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC-----
Confidence 6899999999732 1 2345677889999999999988876541 035899999987654331
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ ..........
T Consensus 180 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~ 238 (280)
T 4da9_A 180 -----------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK----YDGLIESGLV 238 (280)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------
T ss_pred -----------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh----HHHHHhhcCC
Confidence 2346999999999999999887 589999999999999854332111 1111111112
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.. .+.+++|+|+++++|
T Consensus 239 p~~-----r~~~pedvA~~v~~L 256 (280)
T 4da9_A 239 PMR-----RWGEPEDIGNIVAGL 256 (280)
T ss_dssp --------CCBCHHHHHHHHHHH
T ss_pred CcC-----CcCCHHHHHHHHHHH
Confidence 222 688999999999876
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=184.45 Aligned_cols=205 Identities=15% Similarity=0.113 Sum_probs=150.4
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+ |+||++++++|+++|++|++++| +.+.......+... ...+.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 46899999999 99999999999999999999999 44322222322221 1247899999999999988876
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.- +.++||++||.+++.+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 154 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-------- 154 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC--------
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC--------
Confidence 57999999996431 2345667899999999999999998762 02589999997654322
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.++++...... . ........... .++
T Consensus 155 --------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~~~~~-~p~ 217 (261)
T 2wyu_A 155 --------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-G-FTKMYDRVAQT-APL 217 (261)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-T-HHHHHHHHHHH-STT
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-c-cHHHHHHHHhc-CCC
Confidence 123469999999999999998775 899999999999998643221 1 11111111111 122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|++++++
T Consensus 218 ~-----~~~~~~dva~~v~~l 233 (261)
T 2wyu_A 218 R-----RNITQEEVGNLGLFL 233 (261)
T ss_dssp S-----SCCCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 2 678999999998875
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=185.34 Aligned_cols=205 Identities=18% Similarity=0.119 Sum_probs=147.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +........ ... ..++.++++|++|.+++.++++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADL-DVMAAQAVV--AGL---ENGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTC---TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999999999999999 543322211 111 1267899999999999998887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. ++.++||++||..++.+.
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 153 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------- 153 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----------
Confidence 68999999996542 233456789999999999998887653 214799999997654222
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHhcC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVMGN 217 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~~~ 217 (243)
++...|+.+|.+.+.+.+.++.+. |++++++|||.++++....... ............
T Consensus 154 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (263)
T 3ak4_A 154 -----------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS- 221 (263)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH-
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh-
Confidence 123569999999999999998774 8999999999999974211000 000000011111
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+ ...+++++|+|++++++
T Consensus 222 ~~p-----~~~~~~~~dvA~~v~~l 241 (263)
T 3ak4_A 222 LTP-----LGRIEEPEDVADVVVFL 241 (263)
T ss_dssp TCT-----TCSCBCHHHHHHHHHHH
T ss_pred cCC-----CCCCcCHHHHHHHHHHH
Confidence 111 23689999999998875
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-27 Score=185.66 Aligned_cols=202 Identities=15% Similarity=0.186 Sum_probs=146.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
++|+|+||||+|+||++++++|+++|++|++++| +....... ..+.. ..+++++.+|++|.+++.+++++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVGT----PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHCC----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhhc----cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 54332221 11111 14789999999999999888764
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCc-cEEEEEecceeeecCCCCcccccC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTV-KRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
+|+|||+||.... .+.+.+...+++|+.++.++.+.+. +.+ . ++||++||.+++.+.+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------- 150 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP-------- 150 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT--------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC--------
Confidence 8999999996543 2234566789999998887766544 445 5 7999999987553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHH-----HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE-----EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++. .+|++++++|||.++++..... .. ... ........+
T Consensus 151 --------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~--~~~-~~~~~~~~~ 212 (251)
T 1zk4_A 151 --------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG--AEE-AMSQRTKTP 212 (251)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT--HHH-HHTSTTTCT
T ss_pred --------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc--hhh-hHHHhhcCC
Confidence 235699999999999998876 3589999999999999853321 11 101 111111112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+ ..+++++|+|++++++
T Consensus 213 ~-----~~~~~~~dva~~~~~l 229 (251)
T 1zk4_A 213 M-----GHIGEPNDIAYICVYL 229 (251)
T ss_dssp T-----SSCBCHHHHHHHHHHH
T ss_pred C-----CCCcCHHHHHHHHHHH
Confidence 2 2689999999998875
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-26 Score=184.35 Aligned_cols=209 Identities=15% Similarity=0.111 Sum_probs=148.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+... ..+.++.++.+|++|.+++.++++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 1222111 013478999999999999988876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++.+.+ ++.+ .++||++||..++.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--------- 159 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI--------- 159 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC---------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCC---------
Confidence 57999999986432 233557788999999988766654 4445 6799999997654322
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC----CCCcHHHHHHHHhcCc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ----LAGSVRGTLAMVMGNR 218 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~----~~~~~~~~~~~~~~~~ 218 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++..... .............. .
T Consensus 160 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~ 225 (267)
T 1iy8_A 160 -------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ-V 225 (267)
T ss_dssp -------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT-T
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhc-c
Confidence 12356999999999999998876 489999999999998742110 01111100001111 1
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+. ..+.+++|+|+++++++
T Consensus 226 ~p~-----~r~~~~~dvA~~v~~l~ 245 (267)
T 1iy8_A 226 NPS-----KRYGEAPEIAAVVAFLL 245 (267)
T ss_dssp CTT-----CSCBCHHHHHHHHHHHT
T ss_pred CCC-----CCCcCHHHHHHHHHHHc
Confidence 112 26889999999998764
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=180.95 Aligned_cols=175 Identities=18% Similarity=0.167 Sum_probs=137.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---ccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---CTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~v 82 (243)
|+|+||||+|+||++++++|+ +|++|++++| +.. .+.+|++|.+++++++++ +|+|
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r-~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGR-HSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEES-SSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEec-Ccc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 479999999999999999999 9999999999 431 467999999999999876 8999
Q ss_pred EEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 83 IHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 83 i~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
||+||.... .+.+.+...+++|+.++.++++++.+.. +.++||++||..++.+.
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------- 122 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-------------------- 122 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC--------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC--------------------
Confidence 999996432 1234456788999999999999998872 02689999997543221
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHH
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDD 234 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 234 (243)
++...|+.+|.+.|.+++.++.+ +|++++++||+.++++... .+.. ...+++++++|
T Consensus 123 --~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~--------------~~~~-----~~~~~~~~~~d 181 (202)
T 3d7l_A 123 --VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK--------------LEPF-----FEGFLPVPAAK 181 (202)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH--------------HGGG-----STTCCCBCHHH
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh--------------hhhh-----ccccCCCCHHH
Confidence 13356999999999999998866 3999999999999998420 0111 12347899999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++++
T Consensus 182 va~~~~~~ 189 (202)
T 3d7l_A 182 VARAFEKS 189 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998754
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-27 Score=186.39 Aligned_cols=202 Identities=15% Similarity=0.080 Sum_probs=145.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++|+... ..... ... . .++++|++|.+++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~---~~~----~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAE---AIG----G-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHH---HHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH---Hhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999994432 21111 111 4 789999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------- 144 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ--------- 144 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCC---------
Confidence 57999999997543 22345678999999999999887754 34 67999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcH--HHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSV--RGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++.......... ........ ..
T Consensus 145 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~--- 207 (256)
T 2d1y_A 145 -------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE-DL--- 207 (256)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH-TT---
T ss_pred -------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHH-hc---
Confidence 23569999999999999998774 8999999999998863211000000 00000010 11
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....++++++|+|++++++
T Consensus 208 --~~~~~~~~~~dvA~~~~~l 226 (256)
T 2d1y_A 208 --HALRRLGKPEEVAEAVLFL 226 (256)
T ss_dssp --STTSSCBCHHHHHHHHHHH
T ss_pred --CCCCCCcCHHHHHHHHHHH
Confidence 1123789999999999875
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-27 Score=189.03 Aligned_cols=206 Identities=12% Similarity=0.131 Sum_probs=153.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|++|||||+|+||++++++|+++|++|++++|+..........+. ...+.++.++++|++|.+++.++++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV--EKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999995543332222221 1224578999999999999888876
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.. +.++||++||..++.+.+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 191 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE------------ 191 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC------------
Confidence 57999999986532 2445677899999999999999998763 135999999987654331
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.++++....... ...... .....+.
T Consensus 192 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~-~~~~~p~----- 252 (291)
T 3ijr_A 192 ----------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD---EKKVSQ-FGSNVPM----- 252 (291)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC---HHHHHH-TTTTSTT-----
T ss_pred ----------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC---HHHHHH-HHccCCC-----
Confidence 23569999999999999998775 8999999999999984211100 001111 1122222
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 253 ~r~~~p~dvA~~v~~L 268 (291)
T 3ijr_A 253 QRPGQPYELAPAYVYL 268 (291)
T ss_dssp SSCBCGGGTHHHHHHH
T ss_pred CCCcCHHHHHHHHHHH
Confidence 3788999999999876
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=188.53 Aligned_cols=207 Identities=18% Similarity=0.216 Sum_probs=150.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++++|++|.+++.++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAAR-TVERLEDVAKQVTD---TGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 222222 24579999999999999988876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||...+.+.+
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 155 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA---------- 155 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT----------
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC----------
Confidence 57999999986422 2345677889999999999998876542 015999999987553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHhcC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVMGN 217 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~~~ 217 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.++++....... ........... .
T Consensus 156 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 222 (264)
T 3ucx_A 156 ------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA-A 222 (264)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH-T
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh-c
Confidence 2346999999999999999877 58999999999999974221100 00011111111 1
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+ ...+.+++|+|+++++|
T Consensus 223 ~~p-----~~r~~~p~dvA~~v~~L 242 (264)
T 3ucx_A 223 GSD-----LKRLPTEDEVASAILFM 242 (264)
T ss_dssp TSS-----SSSCCBHHHHHHHHHHH
T ss_pred cCC-----cccCCCHHHHHHHHHHH
Confidence 112 23789999999999876
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=186.22 Aligned_cols=200 Identities=15% Similarity=0.177 Sum_probs=145.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++.++.+|++|.++++++++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT-REDKLKEIA--ADL---GKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999 543332221 111 3478999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||.+.+.+.+
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~---------- 168 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP---------- 168 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-----------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC----------
Confidence 68999999997543 22355678899999997777766543 45 57999999987654331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ........ ...++.
T Consensus 169 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~-~~~p~~-- 229 (266)
T 3grp_A 169 ------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN----EKQKEAIM-AMIPMK-- 229 (266)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC----HHHHHHHH-TTCTTC--
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC----HHHHHHHH-hcCCCC--
Confidence 2356999999999999999877 4899999999999987433221 11112221 122222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 230 ---r~~~~edvA~~v~~L 244 (266)
T 3grp_A 230 ---RMGIGEEIAFATVYL 244 (266)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 788999999999876
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=182.01 Aligned_cols=192 Identities=12% Similarity=0.085 Sum_probs=147.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
+|+|+||||+|+||++++++|+++|+ +|++++| +......+. .+. ..+.+++++.+|++|.+++.+++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~ 77 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISLECR---AEGALTDTITADISDMADVRRLT 77 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC-CHHHHHHHHHHHH---ccCCeeeEEEecCCCHHHHHHHH
Confidence 57899999999999999999999999 9999999 543322221 111 12457899999999999998887
Q ss_pred c-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCc
Q 026091 77 A-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 77 ~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
+ ++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---- 152 (244)
T 2bd0_A 78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF---- 152 (244)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCC----
Confidence 6 58999999997543 23355678899999999999988754 35 6799999998754322
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
++...|+.+|.+.+.+++.++.+ +|++++++|||.++++........
T Consensus 153 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------------ 202 (244)
T 2bd0_A 153 ------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE------------ 202 (244)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST------------
T ss_pred ------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc------------
Confidence 13356999999999999888765 589999999999999864332110
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ...+++++|+|++++++
T Consensus 203 ~-------~~~~~~~~dva~~~~~l 220 (244)
T 2bd0_A 203 M-------QALMMMPEDIAAPVVQA 220 (244)
T ss_dssp T-------GGGSBCHHHHHHHHHHH
T ss_pred c-------cccCCCHHHHHHHHHHH
Confidence 0 11689999999998875
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=189.95 Aligned_cols=204 Identities=15% Similarity=0.112 Sum_probs=151.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.. .....+.. .+.++.++.+|++|.+++.++++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGT-DPSRVAQTVQEFRN---VGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 44332 22222222 24578999999999999998887
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... ...+.+...+++|+.++.++.+++.+. + .++||++||...+.+.+
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~--------- 170 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARA--------- 170 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT---------
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCC---------
Confidence 58999999997543 234567788999999999998776553 4 56999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ ........ ...+.
T Consensus 171 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~p~-- 232 (271)
T 4ibo_A 171 -------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEFDAWVK-ARTPA-- 232 (271)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHHHHHHH-HHSTT--
T ss_pred -------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHHHHHHH-hcCCC--
Confidence 2356999999999999999877 589999999999999843211000 01111111 11122
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 233 ---~r~~~pedva~~v~~L 248 (271)
T 4ibo_A 233 ---KRWGKPQELVGTAVFL 248 (271)
T ss_dssp ---CSCBCGGGGHHHHHHH
T ss_pred ---CCCcCHHHHHHHHHHH
Confidence 2688999999998876
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-27 Score=186.82 Aligned_cols=212 Identities=16% Similarity=0.149 Sum_probs=151.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
+.|+|+||||+|+||++++++|+++|++|++++|+..........+... .+.++.++.+|++|.+++.+++++
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 4679999999999999999999999999999999544322222222110 134789999999999998888763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|+|||+||.... ...+.+...+++|+.++.++++++.+. +..++||++||..++...+.. ..
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------~~ 164 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------LN 164 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------TT
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc------cc
Confidence 7999999997543 233456678999999999999987654 313789999997654332100 00
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
...+...|+.+|.+.+.+++.++.+. |++++++|||.++++...... ......... ..+..
T Consensus 165 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~-~~~~~-- 228 (265)
T 1h5q_A 165 ---------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQAS-NIPLN-- 228 (265)
T ss_dssp ---------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHH-TCTTS--
T ss_pred ---------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc----hhHHHHHHh-cCccc--
Confidence 01134579999999999999998763 899999999999998643321 111111111 11222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 229 ---~~~~~~dva~~~~~l 243 (265)
T 1h5q_A 229 ---RFAQPEEMTGQAILL 243 (265)
T ss_dssp ---SCBCGGGGHHHHHHH
T ss_pred ---CCCCHHHHHHHHHhh
Confidence 688999999998875
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=184.99 Aligned_cols=198 Identities=17% Similarity=0.131 Sum_probs=142.7
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
..++|++|||||+|+||++++++|+++|++|++++|+....... +... ++.++.+|++|.+++.++++
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA-----GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH-----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc-----CCeEEECCCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999954432222 2221 47899999999999988876
Q ss_pred ---cccEEEEeeeccCCC----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 ---GCTGVIHVAAPIDIH----GKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||..... ..+.+...+++|+.++.++++++.+. + ..+||++||..++.+.+
T Consensus 96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------- 165 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSS--------- 165 (260)
T ss_dssp HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCS---------
T ss_pred hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC---------
Confidence 579999999975432 12345578999999999998887653 4 57999999987553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+. ++++++++||.+.++..... . ...... ...++.
T Consensus 166 -------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--~----~~~~~~-~~~p~~-- 223 (260)
T 3gem_A 166 -------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--A----YRANAL-AKSALG-- 223 (260)
T ss_dssp -------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------CCSC--
T ss_pred -------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--H----HHHHHH-hcCCCC--
Confidence 23569999999999999998875 59999999999988743211 0 001111 111222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 224 ---r~~~~edva~~v~~L 238 (260)
T 3gem_A 224 ---IEPGAEVIYQSLRYL 238 (260)
T ss_dssp ---CCCCTHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHH
Confidence 577899999999876
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=186.00 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=148.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEE-EeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-VRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.|+|+||||+|+||++++++|+++|++|+++ .| +....... ..+.. .+.++.++.+|++|.+++.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR-SAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999986 56 54332222 11211 13468899999999999998886
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||.+.+.+.+
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------- 146 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI--------- 146 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCC---------
Confidence 58999999997543 233456678999999999998887763 5 67999999986543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++++ +|++++++|||.++++...... ......... ..+.
T Consensus 147 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~-~~~~-- 206 (244)
T 1edo_A 147 -------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG----EDMEKKILG-TIPL-- 206 (244)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC----HHHHHHHHT-SCTT--
T ss_pred -------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC----hHHHHHHhh-cCCC--
Confidence 2346999999999999998876 4899999999999997533211 111111111 1122
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 207 ---~~~~~~~dva~~~~~l 222 (244)
T 1edo_A 207 ---GRTGQPENVAGLVEFL 222 (244)
T ss_dssp ---CSCBCHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHH
Confidence 2689999999998765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-26 Score=185.90 Aligned_cols=202 Identities=15% Similarity=0.104 Sum_probs=146.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|+++.| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSVVDEIKS---FGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHHHHh---cCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999887 4433222 122221 24578999999999999988875
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++.+.+ .+ .++||++||.+++.+.+
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------- 188 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV--------- 188 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC---------
Confidence 58999999997543 23345678899999998888777653 45 68999999986554321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++...... ......... ..+..
T Consensus 189 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~-~~~~~- 249 (285)
T 2c07_A 189 -------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS----EQIKKNIIS-NIPAG- 249 (285)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC----HHHHHHHHT-TCTTS-
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC----HHHHHHHHh-hCCCC-
Confidence 23469999999999999988764 899999999999998543221 111111111 11222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 250 ----~~~~~~dvA~~~~~l 264 (285)
T 2c07_A 250 ----RMGTPEEVANLACFL 264 (285)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 689999999998875
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=180.98 Aligned_cols=191 Identities=22% Similarity=0.231 Sum_probs=135.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+.++|+|+||||+|+||++++++|+++|++|++++| +........ ... .+++++.+|++|.+++.++++
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMAR-DEKRLQALA--AEL----EGALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHS----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh----hhceEEEecCCCHHHHHHHHHHHH
Confidence 6666789999999999999999999999999999999 543322211 111 267899999999998888775
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.... ...+.+...+++|+.++.++++. +++.+ .++||++||.+++.+.
T Consensus 74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------- 144 (234)
T 2ehd_A 74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPF-------- 144 (234)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCC--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCC--------
Confidence 57999999996542 23345678899999999866554 44555 7899999997654321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++.+ +|++++++|||.+.++..... . . .+
T Consensus 145 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~--------~--~~ 195 (234)
T 2ehd_A 145 --------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-----P--------G--QA 195 (234)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------
T ss_pred --------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-----c--------c--cc
Confidence 12356999999999999988766 489999999999988642210 0 0 01
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 196 ------~~~~~~dvA~~~~~l 210 (234)
T 2ehd_A 196 ------WKLKPEDVAQAVLFA 210 (234)
T ss_dssp --------CCHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHH
Confidence 257899999998765
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=183.59 Aligned_cols=206 Identities=18% Similarity=0.127 Sum_probs=147.6
Q ss_pred CCCeEEEecCch-hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTG-FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+| .||++++++|+++|++|++++|+..........+... ...+++++.+|++|.++++++++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL--GLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--CSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 468999999998 6999999999999999999999433222222222221 23579999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. +...+||++||...+.+.
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 168 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ---------- 168 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----------
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----------
Confidence 47999999997543 234556788999999999999987764 125689999997654332
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ ...... ....+
T Consensus 169 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~-~~~~~--- 229 (266)
T 3o38_A 169 ------------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS---ELLDRL-ASDEA--- 229 (266)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCT---
T ss_pred ------------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH---HHHHHH-HhcCC---
Confidence 13356999999999999999877 589999999999998854322110 011111 11112
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
...+.+++|+|++++++
T Consensus 230 --~~r~~~~~dva~~i~~l 246 (266)
T 3o38_A 230 --FGRAAEPWEVAATIAFL 246 (266)
T ss_dssp --TSSCCCHHHHHHHHHHH
T ss_pred --cCCCCCHHHHHHHHHHH
Confidence 23789999999999876
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=185.66 Aligned_cols=209 Identities=17% Similarity=0.176 Sum_probs=146.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+... .......+... .+.++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--HGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--HTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc--cCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999994432 11111111110 02468899999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 150 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA--------- 150 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC---------
Confidence 58999999996542 23455678999999999999887754 34 57999999986543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHH-------HHHHHHhc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVR-------GTLAMVMG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~-------~~~~~~~~ 216 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++........... ........
T Consensus 151 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (260)
T 1x1t_A 151 -------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLS 217 (260)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHH
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhh
Confidence 23569999999999999998774 89999999999999864322110000 00000000
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
... ....+.+++|+|++++++
T Consensus 218 ~~~-----p~~~~~~p~dva~~~~~l 238 (260)
T 1x1t_A 218 EKQ-----PSLQFVTPEQLGGTAVFL 238 (260)
T ss_dssp HHC-----TTCCCBCHHHHHHHHHHH
T ss_pred ccC-----CCCCCcCHHHHHHHHHHH
Confidence 001 123689999999999876
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=185.55 Aligned_cols=210 Identities=17% Similarity=0.085 Sum_probs=150.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.. .....+... ..+.++.++.+|++|.+++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR-DGERLRAAESALRQR-FPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-STTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh-cCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 44332 222222220 113358999999999998888876
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. + ..+||++||...+.+.+
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 154 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEP-------- 154 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCC--------
Confidence 57999999997543 234556788999999999999987653 3 46899999976543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCC------CcHHHHHHHHhc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLA------GSVRGTLAMVMG 216 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~------~~~~~~~~~~~~ 216 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++....... ............
T Consensus 155 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
T 3lf2_A 155 --------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLAR 220 (265)
T ss_dssp --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHH
T ss_pred --------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhh
Confidence 23569999999999999998774 8999999999999873221100 001111111111
Q ss_pred -CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 -NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 -~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+.. .+..++|+|+++++|
T Consensus 221 ~~~~p~~-----r~~~pedvA~~v~fL 242 (265)
T 3lf2_A 221 NKQIPLG-----RLGKPIEAARAILFL 242 (265)
T ss_dssp HTTCTTC-----SCBCHHHHHHHHHHH
T ss_pred ccCCCcC-----CCcCHHHHHHHHHHH
Confidence 112233 788999999999886
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=183.87 Aligned_cols=202 Identities=17% Similarity=0.195 Sum_probs=149.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++.++++|++|.++++++++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDI-NAEGAKAAA--ASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHH--HHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999999999 543322221 111 3578999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.++ +++.++.++||++||...+.+.+
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 148 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP---------- 148 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC----------
Confidence 58999999997543 23456778999999999999887 44444347999999987554331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++................. .++
T Consensus 149 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~--- 209 (247)
T 3rwb_A 149 ------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML----QAM--- 209 (247)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH----SSS---
T ss_pred ------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc----ccc---
Confidence 2356999999999999999887 589999999999998743221111111111110 112
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++.+|
T Consensus 210 --~r~~~pedva~~v~~L 225 (247)
T 3rwb_A 210 --KGKGQPEHIADVVSFL 225 (247)
T ss_dssp --CSCBCHHHHHHHHHHH
T ss_pred --CCCcCHHHHHHHHHHH
Confidence 2678999999999876
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=185.29 Aligned_cols=202 Identities=19% Similarity=0.204 Sum_probs=146.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|..++|+++||||+|+||++++++|+++|++|++++|+....... . +.++.++++|++|.+++.++++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~---~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD------L---GDRARFAAADVTDEAAVASALDLAE 75 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH------T---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHh------c---CCceEEEECCCCCHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999943322111 1 3578999999999999988886
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-----------CccEEEEEecceeee
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-----------TVKRVVYTSSASTVH 134 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~~i~~Ss~~~~~ 134 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. ...+||++||.+.+.
T Consensus 76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 76 TMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp HHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred HhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 78999999996431 3345677899999999999999877642 135899999987553
Q ss_pred cCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHH
Q 026091 135 FSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTL 211 (243)
Q Consensus 135 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~ 211 (243)
+.+ +...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++...... ....
T Consensus 156 ~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~ 209 (257)
T 3tl3_A 156 GQI----------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP----EEAR 209 (257)
T ss_dssp CHH----------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C----HHHH
T ss_pred CCC----------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc----HHHH
Confidence 221 2246999999999999999877 4899999999999998643321 1111
Q ss_pred HHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 212 AMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.......+... .+.+++|+|++++++
T Consensus 210 ~~~~~~~~~~~-----r~~~p~dva~~v~~l 235 (257)
T 3tl3_A 210 ASLGKQVPHPS-----RLGNPDEYGALAVHI 235 (257)
T ss_dssp HHHHHTSSSSC-----SCBCHHHHHHHHHHH
T ss_pred HHHHhcCCCCC-----CccCHHHHHHHHHHH
Confidence 11111111112 689999999999876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-27 Score=188.07 Aligned_cols=202 Identities=15% Similarity=0.157 Sum_probs=150.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +...... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTAT-TEAGAEGIGAAFKQ---AGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH---HTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 4433222 222222 23478899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+ .+ ..+||++||.+++.+.+
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 172 (270)
T 3ftp_A 103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP--------- 172 (270)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC---------
Confidence 58999999997543 23456778899999999999988754 33 46899999977654331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ....... ....++.
T Consensus 173 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~-~~~~p~~- 233 (270)
T 3ftp_A 173 -------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP----QEQQTAL-KTQIPLG- 233 (270)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC----HHHHHHH-HTTCTTC-
T ss_pred -------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC----HHHHHHH-HhcCCCC-
Confidence 2356999999999999999877 4899999999999987422211 1111111 1122222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 234 ----r~~~pedvA~~v~~L 248 (270)
T 3ftp_A 234 ----RLGSPEDIAHAVAFL 248 (270)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 789999999999876
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=184.54 Aligned_cols=206 Identities=16% Similarity=0.096 Sum_probs=148.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++|++.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK---VGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999933322211 122221 13468899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. +..++||++||...+.+.
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 152 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW---------- 152 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC----------
Confidence 68999999997543 233456688999999999988876654 213699999997643221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+. |++++++|||.++++........ ......... ..+.
T Consensus 153 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~-- 215 (261)
T 1gee_A 153 ------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQRADVES-MIPM-- 215 (261)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHHHHHHHT-TCTT--
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC--hhHHHHHHh-cCCC--
Confidence 134569999999999999988764 89999999999999853211000 111111111 1112
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 216 ---~~~~~~~dva~~~~~l 231 (261)
T 1gee_A 216 ---GYIGEPEEIAAVAAWL 231 (261)
T ss_dssp ---SSCBCHHHHHHHHHHH
T ss_pred ---CCCcCHHHHHHHHHHH
Confidence 2689999999998875
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-26 Score=181.49 Aligned_cols=204 Identities=17% Similarity=0.121 Sum_probs=152.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|+++.|+........ ..+.. .+.++.++.+|++|.++++++++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ---AGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999987554333222 22222 24578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.- ..++||++||........
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~------------ 174 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW------------ 174 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS------------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC------------
Confidence 68999999997543 2345677899999999999999988762 146999999864322110
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... ....... . ..+..
T Consensus 175 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~---~--~~~~~---- 235 (271)
T 3v2g_A 175 ---------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHAEAQR---E--RIATG---- 235 (271)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-SSHHHHH---H--TCTTS----
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-hhHHHHH---h--cCCCC----
Confidence 133569999999999999998774 899999999999998654322 2222111 1 11222
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 236 -r~~~pedvA~~v~fL 250 (271)
T 3v2g_A 236 -SYGEPQDIAGLVAWL 250 (271)
T ss_dssp -SCBCHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHH
Confidence 678999999998876
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-27 Score=186.96 Aligned_cols=206 Identities=17% Similarity=0.130 Sum_probs=150.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+... .+.++.++++|++|.++++++++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGR-DVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 2222210 14578999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+. +...+||++||.+.+.+.+
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 166 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP--------- 166 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC---------
Confidence 68999999997543 234557788999999999998887654 2135999999987553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ ........ ...++.
T Consensus 167 -------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~p~~- 229 (266)
T 4egf_A 167 -------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD--EAKSAPMI-ARIPLG- 229 (266)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS--HHHHHHHH-TTCTTS-
T ss_pred -------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC--hHHHHHHH-hcCCCC-
Confidence 2356999999999999999877 489999999999998742211111 01111111 112222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 230 ----r~~~p~dva~~v~~L 244 (266)
T 4egf_A 230 ----RFAVPHEVSDAVVWL 244 (266)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=184.71 Aligned_cols=223 Identities=16% Similarity=0.135 Sum_probs=154.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh--------hchhhhh-hcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ--------KRDLSFL-TNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|++|||||+|+||++++++|+++|++|++++|+.... ...+... ......+.++.++.+|++|.+++.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 568999999999999999999999999999999842110 0111111 1111124578999999999999988
Q ss_pred Hhc-------cccEEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 75 AIA-------GCTGVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
+++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +..+||++||.+.+..... .+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~ 166 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ--PPG 166 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC--CC-
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc--ccc
Confidence 876 68999999997543 3456677899999999999999998863 1358999999876543311 111
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC----------CCcHHHH
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL----------AGSVRGT 210 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~----------~~~~~~~ 210 (243)
.|..+ .++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... .......
T Consensus 167 ~~~~~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T 3pxx_A 167 AGGPQ---------GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA 237 (287)
T ss_dssp ----C---------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred ccccC---------CCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence 11111 0133569999999999999998875 899999999999998643210 0000000
Q ss_pred HHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 211 LAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..... ........+.+++|+|+++++|
T Consensus 238 ~~~~~-----~~~~~~~~~~~p~dva~~v~fL 264 (287)
T 3pxx_A 238 LLAFP-----AMQAMPTPYVEASDISNAVCFL 264 (287)
T ss_dssp HHHGG-----GGCSSSCSCBCHHHHHHHHHHH
T ss_pred Hhhhh-----hhcccCCCCCCHHHHHhhHhee
Confidence 00000 0001114789999999999876
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-27 Score=189.21 Aligned_cols=203 Identities=19% Similarity=0.168 Sum_probs=147.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+....... .. +.++.++.+|++|.+++.++++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI-DGDAADAAAT--KI---GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHH--HH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 5433222211 11 3478999999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ ..+||++||...+.+.
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~----------- 169 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAV----------- 169 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----------
Confidence 57999999997543 23455778999999999999888765 34 5689999997654332
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC----CcHHHHHHHHhcCccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA----GSVRGTLAMVMGNREE 220 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~ 220 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++....... ........... ..+
T Consensus 170 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~ 236 (277)
T 3gvc_A 170 -----------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI--ARL 236 (277)
T ss_dssp -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH--HHH
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh--hcc
Confidence 12356999999999999998877 58999999999999974211000 00000000000 011
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ..+.+++|+|+++++|
T Consensus 237 ~-----~r~~~pedvA~~v~~L 253 (277)
T 3gvc_A 237 Q-----GRMAAPEEMAGIVVFL 253 (277)
T ss_dssp H-----SSCBCHHHHHHHHHHH
T ss_pred c-----cCCCCHHHHHHHHHHH
Confidence 1 2688999999999876
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=182.48 Aligned_cols=198 Identities=18% Similarity=0.175 Sum_probs=144.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+........++.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES-CHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 5433222 22222211112578999999999998888876
Q ss_pred ---cccEEEEeeeccCCC----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 ---GCTGVIHVAAPIDIH----GKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||..... +.+.+...+++|+.++.++++++.+ .+ .++||++||.+.+.+..
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 153 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFA--------- 153 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------C---------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCC---------
Confidence 589999999975431 2244667899999999999888743 44 57999999987554321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++.... . ......
T Consensus 154 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------------~-~~~~~~-- 205 (250)
T 3nyw_A 154 -------------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK------------A-GTPFKD-- 205 (250)
T ss_dssp -------------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH------------T-TCCSCG--
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh------------c-CCCccc--
Confidence 23469999999999999998774 8999999999998763111 0 111112
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 206 ---~~~~~p~dva~~v~~l 221 (250)
T 3nyw_A 206 ---EEMIQPDDLLNTIRCL 221 (250)
T ss_dssp ---GGSBCHHHHHHHHHHH
T ss_pred ---ccCCCHHHHHHHHHHH
Confidence 2689999999999876
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=185.56 Aligned_cols=204 Identities=19% Similarity=0.136 Sum_probs=147.6
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+ ++.++.+|++|.++++++++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR-DAEACADTATRLSA---YG-DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHHTT---SS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999 5433222 122211 12 78899999999999888876
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCC---ccEEEEEecceeeecCCCCccc
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGT---VKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~---~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+. .++||++||.+++.+.+
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~----- 176 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG----- 176 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-----
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-----
Confidence 58999999996543 23456778999999999888877653 341 27999999987553321
Q ss_pred ccCCCCCchhhhhhcCCCCc-hHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc-C
Q 026091 143 LDETFWSDVDYIRKLDIWGK-SYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG-N 217 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~-~ 217 (243)
... .|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... .......... .
T Consensus 177 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~ 235 (276)
T 2b4q_A 177 -----------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI----ANDPQALEADSA 235 (276)
T ss_dssp -----------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH----HHCHHHHHHHHH
T ss_pred -----------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc----chhHHHHHHhhc
Confidence 113 5999999999999999876 489999999999998753211 0001111111 0
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+. ..+.+++|+|++++++
T Consensus 236 ~~p~-----~r~~~p~dvA~~v~~l 255 (276)
T 2b4q_A 236 SIPM-----GRWGRPEEMAALAISL 255 (276)
T ss_dssp TSTT-----SSCCCHHHHHHHHHHH
T ss_pred CCCC-----CCcCCHHHHHHHHHHH
Confidence 1122 2689999999999876
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=180.50 Aligned_cols=200 Identities=18% Similarity=0.172 Sum_probs=148.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|..++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +++++.+|++|.+++++++++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 72 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEGPLREAA--EAV-----GAHPVVMDVADPASVERGFAEAL 72 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTT-----TCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHc-----CCEEEEecCCCHHHHHHHHHHHH
Confidence 6566789999999999999999999999999999999 543322211 111 378899999999998888763
Q ss_pred -----ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 79 -----CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 -----~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|++||+||.... .+.+.+...+++|+.++.++.+++.+. + .++||++||.+ ..+.+
T Consensus 73 ~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~------- 143 (245)
T 1uls_A 73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNL------- 143 (245)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCT-------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCC-------
Confidence 7999999997543 233556788999999999998877654 4 57999999976 32221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... . .......... .+.
T Consensus 144 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~-~p~ 203 (245)
T 1uls_A 144 ---------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P---EKVREKAIAA-TPL 203 (245)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C---HHHHHHHHHT-CTT
T ss_pred ---------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-C---HHHHHHHHhh-CCC
Confidence 2246999999999999998876 489999999999998864321 1 1111111111 112
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+++++|+|++++++
T Consensus 204 ~-----~~~~~~dvA~~v~~l 219 (245)
T 1uls_A 204 G-----RAGKPLEVAYAALFL 219 (245)
T ss_dssp C-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 588999999998875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-26 Score=182.72 Aligned_cols=203 Identities=15% Similarity=0.125 Sum_probs=147.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCCh----hhHHHHhc--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNP----ESFDAAIA-- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~-- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|++.+... ....+... .+.++.++.+|++|. +++.++++
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh--cCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 4789999999999999999999999999999993332221 11111111 034789999999999 88888876
Q ss_pred -----cccEEEEeeeccCC-----CCC-----------ChHHHHHHHHHHHHHHHHHHHHhcC--Cc------cEEEEEe
Q 026091 78 -----GCTGVIHVAAPIDI-----HGK-----------EPEEVIIQRAVSGTIGILKSCLKSG--TV------KRVVYTS 128 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~~i~~S 128 (243)
++|++||+||.... ... +.+...+++|+.++.++++++.+.. .. ++||++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 58999999996533 122 5566799999999999999988753 13 7999999
Q ss_pred cceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCC
Q 026091 129 SASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAG 205 (243)
Q Consensus 129 s~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~ 205 (243)
|.+++.+.+ +...|+.+|.+.+.+.+.++.+. |+++++++||.++++ . ...
T Consensus 169 S~~~~~~~~----------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~- 222 (276)
T 1mxh_A 169 DAMTDLPLP----------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMP- 222 (276)
T ss_dssp CGGGGSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSC-
T ss_pred chhhcCCCC----------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCC-
Confidence 987553321 23469999999999999998774 899999999999998 2 111
Q ss_pred cHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 206 SVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.......... .+.. +++++++|+|++++++
T Consensus 223 --~~~~~~~~~~-~p~~----r~~~~~~dva~~v~~l 252 (276)
T 1mxh_A 223 --QETQEEYRRK-VPLG----QSEASAAQIADAIAFL 252 (276)
T ss_dssp --HHHHHHHHTT-CTTT----SCCBCHHHHHHHHHHH
T ss_pred --HHHHHHHHhc-CCCC----CCCCCHHHHHHHHHHH
Confidence 1111222111 1121 1289999999999876
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-26 Score=181.32 Aligned_cols=202 Identities=17% Similarity=0.196 Sum_probs=151.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|+++.+++...... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA---NGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999998877645433222 222222 24578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL-----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++.+. +.+ .++||++||.+.+.+.+
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 172 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNR-------- 172 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCT--------
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCC--------
Confidence 58999999997543 2345677899999999999998764 334 57999999977654331
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++..... -......... .+..
T Consensus 173 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~--~p~~ 232 (267)
T 4iiu_A 173 --------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSM--IPMK 232 (267)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHT--CTTC
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhc--CCCC
Confidence 23569999999999999888774 89999999999999864432 1111122211 1222
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 233 -----~~~~~edva~~~~~L 247 (267)
T 4iiu_A 233 -----RMGQAEEVAGLASYL 247 (267)
T ss_dssp -----SCBCHHHHHHHHHHH
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=184.03 Aligned_cols=206 Identities=17% Similarity=0.159 Sum_probs=147.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVASEINQ---AGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999 5433222 122222 13478999999999999988887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++.+++.+. +..++||++||...+.+.+
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 147 (256)
T 1geg_A 78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP---------- 147 (256)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----------
Confidence 68999999986432 233556788999999999988876653 2136999999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-------HHHHHHHHhcC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-------VRGTLAMVMGN 217 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-------~~~~~~~~~~~ 217 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......... ..........
T Consensus 148 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (256)
T 1geg_A 148 ------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK- 214 (256)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT-
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh-
Confidence 2346999999999999998876 4899999999999987421100000 0000011111
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+. ..+.+++|+|++++++
T Consensus 215 ~~p~-----~r~~~p~dvA~~v~~l 234 (256)
T 1geg_A 215 RITL-----GRLSEPEDVAACVSYL 234 (256)
T ss_dssp TCTT-----CSCBCHHHHHHHHHHH
T ss_pred cCCC-----CCCcCHHHHHHHHHHH
Confidence 1111 2689999999999876
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=182.56 Aligned_cols=194 Identities=19% Similarity=0.173 Sum_probs=142.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +...... ...+.. .+.+++++.+|++|.+++.++++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR-DVEKLRAVEREIVA---AGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH---hCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999 5433222 222222 24578999999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 174 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVA-------- 174 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCT--------
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCC--------
Confidence 37999999997321 33455678999999999999888654 34 67999999987543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... .. ..
T Consensus 175 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------------~~-~~-- 225 (262)
T 3rkr_A 175 --------------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------------AK-KS-- 225 (262)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc------------cc-cc--
Confidence 2356999999999999999877 5899999999999887432210 00 11
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+++.+|+|++++++
T Consensus 226 ---~~~~~~p~dvA~~v~~l 242 (262)
T 3rkr_A 226 ---ALGAIEPDDIADVVALL 242 (262)
T ss_dssp ------CCCHHHHHHHHHHH
T ss_pred ---cccCCCHHHHHHHHHHH
Confidence 12578999999998876
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=187.04 Aligned_cols=207 Identities=15% Similarity=0.154 Sum_probs=150.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..........+... .+.++.++++|++|.+++.++++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999433222222222111 13578999999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ ..+||++||...+.+.+
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 172 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQA---------- 172 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCT----------
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC----------
Confidence 58999999996432 34456778999999999999998754 23 46999999987553331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++.................. ..++.
T Consensus 173 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~p~~-- 236 (277)
T 4fc7_A 173 ------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVT--ASPLQ-- 236 (277)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHH--TSTTS--
T ss_pred ------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhc--cCCCC--
Confidence 23569999999999999998774 899999999999987311110000111111111 11222
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|+++++|
T Consensus 237 ---r~~~p~dvA~~v~fL 251 (277)
T 4fc7_A 237 ---RLGNKTEIAHSVLYL 251 (277)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 688999999999886
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=183.25 Aligned_cols=206 Identities=17% Similarity=0.181 Sum_probs=148.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch--hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE--QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|+... .......+.. .+.++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA---ADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999994332 1111122221 24578999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCc-cEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTV-KRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~-~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. + . ++||++||.+.+.+.
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~--------- 148 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGF--------- 148 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCC---------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCC---------
Confidence 68999999997543 234567789999999999998887763 5 5 799999997654322
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC-------CcHHHHHHHHh
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA-------GSVRGTLAMVM 215 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~~~~ 215 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++....... ...........
T Consensus 149 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T 3a28_C 149 -------------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYS 215 (258)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHH
Confidence 12356999999999999998876 48999999999998874211000 00000000111
Q ss_pred cCccccccccCcCceeHHHHHHhhhcc
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...++ ..+.+++|+|++++++
T Consensus 216 -~~~p~-----~r~~~p~dvA~~v~~l 236 (258)
T 3a28_C 216 -SSIAL-----GRPSVPEDVAGLVSFL 236 (258)
T ss_dssp -TTCTT-----SSCBCHHHHHHHHHHH
T ss_pred -hcCCC-----CCccCHHHHHHHHHHH
Confidence 11111 2689999999999876
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=179.74 Aligned_cols=204 Identities=20% Similarity=0.169 Sum_probs=147.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAAR-RVEKLRALGDELTA---AGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 122221 23578999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCC--ccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGT--VKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+++...+++|+.++.++++++.+... -++||++||.+++.+.
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 149 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNV------------ 149 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCC------------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCC------------
Confidence 58999999997532 23345677899999999999988765420 1699999997654322
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .........+ .
T Consensus 150 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~------~ 210 (247)
T 2jah_A 150 ----------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT---ATKEMYEQRI------S 210 (247)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH---HHHHHHHHHT------T
T ss_pred ----------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch---hhHHHHHhcc------c
Confidence 12346999999999999998876 489999999999998854322111 1111111100 1
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++.+|+|++++++
T Consensus 211 ~~~~~~pedvA~~v~~l 227 (247)
T 2jah_A 211 QIRKLQAQDIAEAVRYA 227 (247)
T ss_dssp TSCCBCHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHH
Confidence 11258999999999876
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=183.28 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=147.1
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||+|+||++++++|+++|++|+++.+++........... ...+.++.++++|++|.++++++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI--EAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999988664554332222111 1124578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.- ...+||++||.....+.+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 170 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------ 170 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------------
Confidence 58999999997543 2334567888999999999999887752 135899999976543321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++........ ....... ...++.
T Consensus 171 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~-~~~p~~---- 232 (267)
T 3u5t_A 171 ----------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD---EVRDRFA-KLAPLE---- 232 (267)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHH-TSSTTC----
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH---HHHHHHH-hcCCCC----
Confidence 23469999999999999999884 89999999999998853221110 0111111 112222
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 233 -r~~~pedvA~~v~~L 247 (267)
T 3u5t_A 233 -RLGTPQDIAGAVAFL 247 (267)
T ss_dssp -SCBCHHHHHHHHHHH
T ss_pred -CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-26 Score=181.57 Aligned_cols=205 Identities=17% Similarity=0.167 Sum_probs=147.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +...... ...+.. ..+.++.++.+|++|.+++.++++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433221 111101 013468899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecce-eeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSAS-TVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~-~~~~~~~~~~~~~e 145 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+ ...+.
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------- 166 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM--------- 166 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS---------
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCC---------
Confidence 58999999997543 23345667899999999999887643 44 67999999976 32111
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .......... .+..
T Consensus 167 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~-~p~~ 230 (267)
T 1vl8_A 167 -------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKLDYMLKR-IPLG 230 (267)
T ss_dssp -------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHHHHHHHT-CTTS
T ss_pred -------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--hHHHHHHHhh-CCCC
Confidence 12356999999999999999877 489999999999998742211000 1111111111 1122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 231 -----~~~~p~dvA~~v~~l 245 (267)
T 1vl8_A 231 -----RTGVPEDLKGVAVFL 245 (267)
T ss_dssp -----SCBCGGGGHHHHHHH
T ss_pred -----CCcCHHHHHHHHHHH
Confidence 688999999998875
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=185.24 Aligned_cols=199 Identities=17% Similarity=0.119 Sum_probs=145.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEEGAATA--REL---GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 543322211 111 2468899999999999988886
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILK----SCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+ .+++.+ .++||++||.+++.+.+
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA---------- 146 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence 68999999997543 2335577899999999985554 455556 68999999986543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc-
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM- 223 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++.... . .......+..
T Consensus 147 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------~---~~~~~~~~~~~ 203 (254)
T 1hdc_A 147 ------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE--------T---GIRQGEGNYPN 203 (254)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--------H---TCCCSTTSCTT
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc--------c---chhHHHHHHhc
Confidence 2356999999999999999876 48999999999999973211 0 0000000000
Q ss_pred ccCcCce-eHHHHHHhhhcc
Q 026091 224 LLNISMV-HIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i-~v~Dva~a~~~~ 242 (243)
.....+. +++|+|++++++
T Consensus 204 ~p~~~~~~~~~dvA~~v~~l 223 (254)
T 1hdc_A 204 TPMGRVGNEPGEIAGAVVKL 223 (254)
T ss_dssp STTSSCB-CHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHH
Confidence 1112577 999999998875
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=181.96 Aligned_cols=205 Identities=19% Similarity=0.162 Sum_probs=145.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|+++.++....... ...+.. .+.++.++.+|++|.++++++++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK---LGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT---TTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999986645433222 222222 24578999999999999988886
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceee-ecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTV-HFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~-~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+.. +-.+||++||.+.+ .+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG----------- 152 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS-----------
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC-----------
Confidence 58999999986521 2334567889999999999999998874 12489999997654 111
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC--ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG--LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g--i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
+....|+.+|.+.+.+.+.++.+.+ ++++.++||.+.++....... ....... ....++
T Consensus 153 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~-~~~~p~---- 213 (259)
T 3edm_A 153 -----------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK---PEVRERV-AGATSL---- 213 (259)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------
T ss_pred -----------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC---hHHHHHH-HhcCCC----
Confidence 1235699999999999999988753 999999999999875432211 0011111 111122
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 214 -~r~~~pedva~~v~~L 229 (259)
T 3edm_A 214 -KREGSSEDVAGLVAFL 229 (259)
T ss_dssp --CCBCHHHHHHHHHHH
T ss_pred -CCCcCHHHHHHHHHHH
Confidence 2688999999999876
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=188.40 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=150.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc-hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP-EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|+++|++|+++.|+.. ........+. ...+.++.++.+|++|.++++++++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI--EECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH--HHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHH--HHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999988422 2222222111 1124578999999999998888875
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||.+++.+.+
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~----------- 194 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP----------- 194 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT-----------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC-----------
Confidence 58999999997432 2345677899999999999999998874 124999999987653321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.++++........ ...... .....+
T Consensus 195 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~-~~~~~p----- 255 (294)
T 3r3s_A 195 -----------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT--QDKIPQ-FGQQTP----- 255 (294)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC--GGGSTT-TTTTST-----
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC--HHHHHH-HHhcCC-----
Confidence 23569999999999999998875 89999999999999741111000 000000 011111
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
...+.+++|+|+++++|
T Consensus 256 ~~r~~~p~dvA~~v~~L 272 (294)
T 3r3s_A 256 MKRAGQPAELAPVYVYL 272 (294)
T ss_dssp TSSCBCGGGGHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHH
Confidence 23688999999999876
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-26 Score=182.21 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=152.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|+++.|++....... ..+.. .+.++.++.+|++|.+++.++++
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA---LGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999888555433222 22222 24578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||.......
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 160 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS------------- 160 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-------------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-------------
Confidence 57999999997543 2445677899999999999999988874 12499999996521100
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC--------CCcHHHHHHHHhcCc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL--------AGSVRGTLAMVMGNR 218 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~--------~~~~~~~~~~~~~~~ 218 (243)
.++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++...... ............ ..
T Consensus 161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (270)
T 3is3_A 161 --------VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA-HA 231 (270)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH-HH
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH-hc
Confidence 013356999999999999999887 4899999999999998532100 000111111111 11
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.++. .+.+++|+|+++++|+
T Consensus 232 ~p~~-----r~~~p~dvA~~v~~L~ 251 (270)
T 3is3_A 232 SPLH-----RNGWPQDVANVVGFLV 251 (270)
T ss_dssp STTC-----SCBCHHHHHHHHHHHT
T ss_pred CCCC-----CCCCHHHHHHHHHHHc
Confidence 2222 6889999999998874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=179.71 Aligned_cols=203 Identities=13% Similarity=0.145 Sum_probs=147.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
++|+++||||+|+||++++++|+++|++|++++| +++...... .. .++.++.+|++|.++++++.+ ++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~---~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NESKLQELE---KY----PGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHGGGG---GS----TTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---hc----cCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 5689999999999999999999999999999999 553332221 11 278999999999999887754 689
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+|||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+.+.+.+
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 141 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV-------------- 141 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC--------------
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC--------------
Confidence 99999997543 23355678899999999999988754 35 67999999976442221
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCccccccccC
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
++...|+.+|.+.+.+.+.++.+. |++++++|||.++++...... ............. ..+.
T Consensus 142 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~----- 208 (246)
T 2ag5_A 142 -------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-RQKT----- 208 (246)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-TCTT-----
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh-cCCC-----
Confidence 023469999999999999998764 899999999999998421100 0000111111111 1112
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 209 ~~~~~~~dvA~~v~~l 224 (246)
T 2ag5_A 209 GRFATAEEIAMLCVYL 224 (246)
T ss_dssp SSCEEHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 2689999999999876
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=183.76 Aligned_cols=201 Identities=14% Similarity=0.144 Sum_probs=141.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++.++++|++|.+++.++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR-RLDALQETA--AEI---GDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999 543322221 111 2478999999999999998886
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-----TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+.. +..+||++||.+++.+.
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------- 171 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR--------- 171 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC---------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC---------
Confidence 68999999997432 2345667899999999999988766542 02589999997654332
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++......... .... ...+
T Consensus 172 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~--~~~~-- 230 (272)
T 4dyv_A 172 -------------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV----PQAD--LSIK-- 230 (272)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc----hhhh--hccc--
Confidence 13356999999999999999877 4899999999999988533221110 0000 0111
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...+++++|+|+++++|+
T Consensus 231 ---~~~~~~pedvA~~v~fL~ 248 (272)
T 4dyv_A 231 ---VEPVMDVAHVASAVVYMA 248 (272)
T ss_dssp --------CHHHHHHHHHHHH
T ss_pred ---ccCCCCHHHHHHHHHHHh
Confidence 125889999999998863
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.4e-26 Score=178.33 Aligned_cols=192 Identities=20% Similarity=0.137 Sum_probs=143.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++| +.+........ . ..++.++.+|++|.+++.++++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGR-RYQRLQQQELL--L---GNAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--H---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--h---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999999 54333222211 1 1268999999999999888876
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.- +-.+||++||.+.+.+.+
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------- 143 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA------------- 143 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS-------------
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC-------------
Confidence 47999999997443 2345677899999999999988876541 123999999976553321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.||.+.+.+.+.++.+ +|++++.++||.+.++....... . ...
T Consensus 144 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~--~~~----- 195 (235)
T 3l6e_A 144 ---------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------V--DPS----- 195 (235)
T ss_dssp ---------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------C--CCc-----
Confidence 2246999999999999999887 48999999999998874322100 0 111
Q ss_pred CceeHHHHHHhhhccC
Q 026091 228 SMVHIDDVARAHIFFT 243 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~~ 243 (243)
.+++++|+|+++++++
T Consensus 196 ~~~~pedvA~~v~~l~ 211 (235)
T 3l6e_A 196 GFMTPEDAAAYMLDAL 211 (235)
T ss_dssp -CBCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHH
Confidence 5789999999998764
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-26 Score=182.19 Aligned_cols=201 Identities=14% Similarity=0.110 Sum_probs=143.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|++.|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGAR-RQARIEAIATEIRD---AGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 4433222 222222 24578899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||.+++.+.+
T Consensus 79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~--------- 148 (264)
T 3tfo_A 79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVP--------- 148 (264)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCC---------
Confidence 58999999997543 23456778999999999988887654 34 57999999987553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++........... . . .. ..
T Consensus 149 -------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~----~---~~-~~ 204 (264)
T 3tfo_A 149 -------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETM---A----A---MD-TY 204 (264)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------
T ss_pred -------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHH---H----H---HH-hh
Confidence 23469999999999999998875 99999999999998753322110000 0 0 00 00
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
...++..+|+|++++++
T Consensus 205 ~~~~~~pedvA~~v~~l 221 (264)
T 3tfo_A 205 RAIALQPADIARAVRQV 221 (264)
T ss_dssp ---CCCHHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHH
Confidence 11357899999999876
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=184.90 Aligned_cols=205 Identities=17% Similarity=0.142 Sum_probs=146.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
.++|+|+||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.+++.+++++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT---YGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH---HCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999954322211111111 134789999999999999888864
Q ss_pred ---ccEEEEeeeccCC-C------CCChHHHHHHHHHHHH----HHHHHHHHhcCCccEEEEEecceeeecCCCCccccc
Q 026091 79 ---CTGVIHVAAPIDI-H------GKEPEEVIIQRAVSGT----IGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-~------~~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||+||.... . ..+.+...+++|+.++ .++++.+++.+ .++||++||.+++.+..
T Consensus 109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 180 (279)
T 3ctm_A 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNI------- 180 (279)
T ss_dssp HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---------
T ss_pred hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCC-------
Confidence 8999999996533 1 1234557889999994 56666676666 78999999976432210
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
.++...|+.+|.+.|.+++.++.+. + ++++++||.+.++...... ......+. ...+.
T Consensus 181 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~----~~~~~~~~-~~~p~ 241 (279)
T 3ctm_A 181 -------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS----KDMKAKWW-QLTPL 241 (279)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC----HHHHHHHH-HHSTT
T ss_pred -------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC----hHHHHHHH-HhCCc
Confidence 0133569999999999999998774 6 9999999999998643211 11111111 11112
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+++++|+|++++++
T Consensus 242 ~-----~~~~~~dvA~~~~~l 257 (279)
T 3ctm_A 242 G-----REGLTQELVGGYLYL 257 (279)
T ss_dssp C-----SCBCGGGTHHHHHHH
T ss_pred c-----CCcCHHHHHHHHHHH
Confidence 2 689999999998875
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=183.21 Aligned_cols=203 Identities=15% Similarity=0.193 Sum_probs=149.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+||||||+|+||++++++|+++|++|+++++++.... .....+.. .+.++.++.+|++|.++++++++
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA---LGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999885343322 22222222 24578999999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+.+. +.+ .++||++||.+.+.+.+
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 158 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF--------- 158 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS---------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC---------
Confidence 57999999997543 2335567899999999888877664 445 57999999976553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......+.... ..... .+..
T Consensus 159 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~--~~~~- 219 (256)
T 3ezl_A 159 -------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE---KIVAT--IPVR- 219 (256)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH---HHHHH--STTS-
T ss_pred -------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHH---HHHhc--CCCC-
Confidence 3356999999999999999877 589999999999998753322111111 11111 1122
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 220 ----~~~~~~dva~~~~~l 234 (256)
T 3ezl_A 220 ----RLGSPDEIGSIVAWL 234 (256)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 688999999998875
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-26 Score=182.90 Aligned_cols=212 Identities=15% Similarity=0.111 Sum_probs=149.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+..... ..+........++.++.+|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 54332221 2222110001168999999999999888876
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.. ..++||++||..++....
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 156 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ------ 156 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC------
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC------
Confidence 58999999996432 1234567889999999999999877642 016999999976542220
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-CCc----HHHHHHHHh
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL-AGS----VRGTLAMVM 215 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~-~~~----~~~~~~~~~ 215 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++...... ... ........
T Consensus 157 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~- 220 (280)
T 1xkq_A 157 ---------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH- 220 (280)
T ss_dssp ---------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC-
T ss_pred ---------------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHH-
Confidence 12356999999999999998865 5899999999999998532211 000 00011111
Q ss_pred cCccccccccCcCceeHHHHHHhhhcc
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+. ..+.+++|+|++++++
T Consensus 221 ~~~~p~-----~~~~~pedvA~~v~~l 242 (280)
T 1xkq_A 221 KECIPI-----GAAGKPEHIANIILFL 242 (280)
T ss_dssp TTTCTT-----SSCBCHHHHHHHHHHH
T ss_pred HcCCCC-----CCCCCHHHHHHHHHHh
Confidence 111122 2689999999999876
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=187.70 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=131.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc-hhhchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP-EQKRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
|++++|+++||||+|+||++++++|+++|++|++..|+.. .....+..+.. ....+.++.++.+|++|.+++.++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 5556789999999999999999999999999999998421 11122222211 11124578999999999999998887
Q ss_pred ------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCccc
Q 026091 78 ------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|+|||+||.... .+.+++...+++|+.++.++++++ ++.+ .++||++||.+.+....
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~----- 154 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTP----- 154 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCC-----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCC-----
Confidence 68999999996432 234556788999999999999988 5556 68999999976542221
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
+....|+.||.+.|.+.+.++.+ +|+++++++||.+.++.
T Consensus 155 ----------------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 155 ----------------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp ----------------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred ----------------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 12346999999999999999877 59999999999998764
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=185.61 Aligned_cols=193 Identities=15% Similarity=0.087 Sum_probs=144.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+|+||||+|+||++++++|+++|++|++++| +...... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAKCKG---LGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc-CHHHHHHHHHHHHh---cCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 5433222 222222 13578999999999999888876
Q ss_pred ---cccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||..... ..+.+...+++|+.++.++++.+.+ .+ .++||++||..++.+.
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--------- 174 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV--------- 174 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH---------
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC---------
Confidence 589999999975432 1244567899999998888776643 45 6899999998754322
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc------CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH------GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~------gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
++...|+.+|.+.+.+++.++.+. |+++++++||.+.++..... ..
T Consensus 175 -------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~ 226 (272)
T 1yb1_A 175 -------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---------------ST 226 (272)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---------------HH
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---------------cc
Confidence 123469999999999999988764 89999999999998853210 00
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+ ..+++++|+|++++++
T Consensus 227 ~~-----~~~~~~~dva~~i~~~ 244 (272)
T 1yb1_A 227 SL-----GPTLEPEEVVNRLMHG 244 (272)
T ss_dssp HH-----CCCCCHHHHHHHHHHH
T ss_pred cc-----cCCCCHHHHHHHHHHH
Confidence 11 1578889999888754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=183.23 Aligned_cols=192 Identities=19% Similarity=0.123 Sum_probs=136.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+|+||||+|+||++++++|++ .|++|++++| +.... .....+.. .+.+++++.+|++|.+++.++++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR-DVTRGQAAVQQLQA---EGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES-SHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC-ChHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999 8999999999 44322 22222222 13578999999999999988887
Q ss_pred ---cccEEEEeeeccCCCC-----CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCC---------
Q 026091 78 ---GCTGVIHVAAPIDIHG-----KEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKD--------- 139 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~--------- 139 (243)
++|+|||+||...... .+.+...+++|+.++.++++++.+.. +.++||++||..++.+....
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~ 158 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence 6899999999754311 24456789999999999999998874 12499999998766431100
Q ss_pred cccccCCCCCch--hh--------hhhcCCCCchHHhhHHHHHHHHHHHHHH-------cCccEEEEccCceeCCCC
Q 026091 140 VDMLDETFWSDV--DY--------IRKLDIWGKSYKLSKTLAERAALEFAEE-------HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 140 ~~~~~e~~~~~~--~~--------~~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~gi~~~~~rp~~i~G~~~ 199 (243)
...++|..+... .+ ......|...|+.+|.+.+.+++.++.+ +|+++++++||.+.++..
T Consensus 159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~ 235 (276)
T 1wma_A 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235 (276)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence 011122111000 00 0000113467999999999999988766 489999999999998753
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-26 Score=181.31 Aligned_cols=204 Identities=14% Similarity=0.091 Sum_probs=147.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhc-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIA- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~- 77 (243)
|..++|+++||||+|+||++++++|+++|++ |++++|+... .....+.... .+.+++++.+|++|. +++.++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHH
Confidence 6666789999999999999999999999997 9999984421 1222222211 134688999999998 88887776
Q ss_pred ------cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCcccccC
Q 026091 78 ------GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||... .+.+...+++|+.++.++++++.+.. ..++||++||.+++.+.+
T Consensus 78 ~~~~~g~id~lv~~Ag~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 146 (254)
T 1sby_A 78 IFDQLKTVDILINGAGILD---DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-------- 146 (254)
T ss_dssp HHHHHSCCCEEEECCCCCC---TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT--------
T ss_pred HHHhcCCCCEEEECCccCC---HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC--------
Confidence 6899999999753 35577999999999999999887542 025799999987543221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc--HHHHHHHHhcCccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS--VRGTLAMVMGNREE 220 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~ 220 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......... ........
T Consensus 147 --------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------ 206 (254)
T 1sby_A 147 --------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------ 206 (254)
T ss_dssp --------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH------
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH------
Confidence 2346999999999999998876 6999999999999998432211000 00000111
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+.+++|+|++++++
T Consensus 207 ----~~~~~~~~~dvA~~i~~~ 224 (254)
T 1sby_A 207 ----LSHPTQTSEQCGQNFVKA 224 (254)
T ss_dssp ----TTSCCEEHHHHHHHHHHH
T ss_pred ----hcCCCCCHHHHHHHHHHH
Confidence 111456899999998765
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-26 Score=181.46 Aligned_cols=213 Identities=17% Similarity=0.153 Sum_probs=149.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cc
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GC 79 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~ 79 (243)
.+.|+++||||+|+||++++++|+++|++|++++|+..........+... ..+..+.++.+|++|.+.+.++++ ++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ-YPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-CTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999999433222222222221 113467889999999999998886 68
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||...+.+.+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------- 152 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ------------- 152 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC-------------
Confidence 999999997543 23455667899999998888776544 45 67999999987553321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC-------CCCcHHHHHHHH-hcCcc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMV-MGNRE 219 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~-~~~~~ 219 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++..... .........+.. ....+
T Consensus 153 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (267)
T 3t4x_A 153 ---------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP 223 (267)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT
T ss_pred ---------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC
Confidence 23569999999999999998875 79999999999988631110 000011111111 10000
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
......+.+++|+|+++++|
T Consensus 224 ---~~~~~r~~~pedvA~~v~fL 243 (267)
T 3t4x_A 224 ---TSIIQRLIRPEEIAHLVTFL 243 (267)
T ss_dssp ---TCSSCSCBCTHHHHHHHHHH
T ss_pred ---cccccCccCHHHHHHHHHHH
Confidence 01123789999999999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-26 Score=178.77 Aligned_cols=174 Identities=18% Similarity=0.199 Sum_probs=131.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+|+|+||||+|+||++++++|+++| ++|++++| +......+. .. .+.+++++.+|++|.+++.++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r-~~~~~~~l~---~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKATELK---SI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGGCHHHH---TC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec-CHHHHHHHH---hc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999 99999999 543332222 21 24578999999999999988887
Q ss_pred ----cccEEEEeeeccC-C-----CCCChHHHHHHHHHHHHHHHHHHHHhc----------CC----ccEEEEEecceee
Q 026091 78 ----GCTGVIHVAAPID-I-----HGKEPEEVIIQRAVSGTIGILKSCLKS----------GT----VKRVVYTSSASTV 133 (243)
Q Consensus 78 ----~~d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~----~~~~i~~Ss~~~~ 133 (243)
++|+|||+||... . ...+.+...+++|+.++.++++++.+. +. .++||++||...+
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 7999999999755 2 223456678999999999998877653 11 4699999998755
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCC
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~ 199 (243)
.+... +.. ..++...|+.+|.+.+.+++.++.+. |+++++++||.+.++..
T Consensus 157 ~~~~~------~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 210 (250)
T 1yo6_A 157 ITDNT------SGS---------AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210 (250)
T ss_dssp STTCC------STT---------SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred cCCcc------ccc---------ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC
Confidence 43211 000 01234579999999999999998775 89999999999988753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-26 Score=183.86 Aligned_cols=204 Identities=17% Similarity=0.189 Sum_probs=148.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
++|+++||||+|+||++++++|++.|+ +|++++| +.+..+... .+.. ...+.++.++.+|++|.++++++++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r-~~~~~~~~~~~l~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR-RLEKLEELKKTIDQ-EFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHHHHH-HCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC-CHHHHHHHHHHHHh-hCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 468999999999999999999999987 9999999 544332222 2211 1124578999999999999999986
Q ss_pred -----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccc
Q 026091 78 -----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++. +.+ .++||++||.+.+.+.+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~----- 183 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYP----- 183 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCC-----
Confidence 47999999996541 2345677899999999999999874 445 57999999977543321
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++..................
T Consensus 184 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---- 242 (287)
T 3rku_A 184 -----------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK---- 242 (287)
T ss_dssp -----------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT----
T ss_pred -----------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc----
Confidence 2356999999999999999988 5899999999999987321110000111111111
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...++.++|+|++++++
T Consensus 243 ------~~~p~~pedvA~~v~~l 259 (287)
T 3rku_A 243 ------DTTPLMADDVADLIVYA 259 (287)
T ss_dssp ------TSCCEEHHHHHHHHHHH
T ss_pred ------ccCCCCHHHHHHHHHHH
Confidence 11356899999999876
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-26 Score=177.74 Aligned_cols=193 Identities=16% Similarity=0.131 Sum_probs=141.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc----c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC----T 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----d 80 (243)
||+++||||+|+||++++++|+++|++|++++| +.+...... ... ..++.++.+|++|.+++.++++++ |
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d 74 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGR-SESKLSTVT--NCL---SNNVGYRARDLASHQEVEQLFEQLDSIPS 74 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHH--HTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHH---hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence 578999999999999999999999999999999 553332221 111 357889999999999999998764 8
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
+|||+||.... ...+.+...+++|+.++.++++++.+.. ...+||++||...+.+.+
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------- 138 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA---------------- 138 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT----------------
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC----------------
Confidence 99999996543 2345567889999999999999887652 123899999976543321
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCce
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV 230 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... ..... ..++
T Consensus 139 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~~-----~~~~ 194 (230)
T 3guy_A 139 ------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-------------KSLDT-----SSFM 194 (230)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CC
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-------------CCCCc-----ccCC
Confidence 23569999999999999998885 899999999999887432210 11112 2688
Q ss_pred eHHHHHHhhhccC
Q 026091 231 HIDDVARAHIFFT 243 (243)
Q Consensus 231 ~v~Dva~a~~~~~ 243 (243)
+++|+|+++++++
T Consensus 195 ~~~dvA~~i~~l~ 207 (230)
T 3guy_A 195 SAEDAALMIHGAL 207 (230)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998753
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=187.86 Aligned_cols=211 Identities=18% Similarity=0.133 Sum_probs=146.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+... ....+.. .+.++.++.+|++|.+++.++++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDV-DQPALEQAVNGLRG---QGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999 443322 2222222 24578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+. ++.++||++||.+.+.+.+
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 176 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--------- 176 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT---------
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC---------
Confidence 68999999997543 334556789999999999999987543 2236899999987553321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc-cccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR-EEYS 222 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~ 222 (243)
....|+.||.+.+.+.+.++.+. |+++++++||.+.++........ ..........+ ..+.
T Consensus 177 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~ 241 (301)
T 3tjr_A 177 -------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERI--RGADYGMSATPEGAFG 241 (301)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHH--C---------------
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccc--cchhhccccChhhhcc
Confidence 23569999999999999988774 89999999999988732110000 00000000000 0000
Q ss_pred -cccCcCceeHHHHHHhhhcc
Q 026091 223 -MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 -~~~~~~~i~v~Dva~a~~~~ 242 (243)
......+++++|+|++++.+
T Consensus 242 ~~~~~~~~~~pedvA~~i~~~ 262 (301)
T 3tjr_A 242 PLPTQDESVSADDVARLTADA 262 (301)
T ss_dssp -------CCCHHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHH
Confidence 12234689999999998764
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=183.52 Aligned_cols=206 Identities=18% Similarity=0.148 Sum_probs=144.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +....... ..+... ....++.++.+|++|.+++.++++
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-ChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999 54332222 222211 112358899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHH----HHHHHHHHHhcCCc--cEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSG----TIGILKSCLKSGTV--KRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|+|||+||.... ...+.+...+++|+.+ +..++..+++.+ . ++||++||..++...+
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~------- 180 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLP------- 180 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCS-------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCC-------
Confidence 68999999996543 1334567889999999 556666676666 4 7999999976542111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
.++...|+.+|.+.+.+.+.++.+ .++++++++||.+.++................
T Consensus 181 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------ 241 (279)
T 1xg5_A 181 -------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT------ 241 (279)
T ss_dssp -------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH------
T ss_pred -------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh------
Confidence 012356999999999999988765 47999999999998874211000000100000
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.....+++++|+|++++++
T Consensus 242 ----~~~~~~~~~~dvA~~i~~l 260 (279)
T 1xg5_A 242 ----YEQMKCLKPEDVAEAVIYV 260 (279)
T ss_dssp ----HC---CBCHHHHHHHHHHH
T ss_pred ----cccccCCCHHHHHHHHHHH
Confidence 1112578999999999875
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=185.96 Aligned_cols=207 Identities=15% Similarity=0.067 Sum_probs=150.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+..........+.. .+.++.++.+|++|.+++.++++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA---SGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH---TTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999954433222222222 24678999999999998888876
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ ..+||++||...+...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~------------ 175 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK------------ 175 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC------------
Confidence 58999999996433 34456778899999999999988743 44 5799999997654321
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
++...|+.+|.+.+.+.+.++.+. |++++.++||.+.++......... ............++.
T Consensus 176 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~p~~--- 241 (275)
T 4imr_A 176 ----------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD-PEGWDEYVRTLNWMG--- 241 (275)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC-HHHHHHHHHHHSTTC---
T ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC-hHHHHHHHhhcCccC---
Confidence 123459999999999999998874 899999999999887321110000 000011111111222
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 242 --r~~~pedvA~~v~fL 256 (275)
T 4imr_A 242 --RAGRPEEMVGAALFL 256 (275)
T ss_dssp --SCBCGGGGHHHHHHH
T ss_pred --CCcCHHHHHHHHHHH
Confidence 678899999999876
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-26 Score=184.69 Aligned_cols=212 Identities=15% Similarity=0.092 Sum_probs=149.2
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+........++.++.+|++|.+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999 5433222 22222210001168999999999999888876
Q ss_pred ---cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.. .-++||++||...+.+..
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~-------- 174 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-------- 174 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC--------
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC--------
Confidence 58999999996432 2234577899999999999998877642 016999999976542220
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-CCcH----HHHHHHHhcC
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL-AGSV----RGTLAMVMGN 217 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~-~~~~----~~~~~~~~~~ 217 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... .... ....... ..
T Consensus 175 -------------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (297)
T 1xhl_A 175 -------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR-KE 240 (297)
T ss_dssp -------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC-TT
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH-Hh
Confidence 12346999999999999998865 5899999999999998432211 0000 0011111 11
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+. ..+.+++|+|++++++
T Consensus 241 ~~p~-----~r~~~pedvA~~v~~l 260 (297)
T 1xhl_A 241 CIPV-----GHCGKPEEIANIIVFL 260 (297)
T ss_dssp TCTT-----SSCBCHHHHHHHHHHH
T ss_pred cCCC-----CCCcCHHHHHHHHHHH
Confidence 1122 2689999999998876
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-25 Score=179.17 Aligned_cols=211 Identities=18% Similarity=0.179 Sum_probs=151.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch------------hhchhhhh-hcCCCCCCCeEEEecCCCChh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE------------QKRDLSFL-TNLPRASERLQIFNADLNNPE 70 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~ 70 (243)
++|+++||||+|+||++++++|++.|++|++++|+.+. ..+.+..+ ......+.++.++.+|++|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 56899999999999999999999999999999984211 01111111 111223567999999999999
Q ss_pred hHHHHhc-------cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceee
Q 026091 71 SFDAAIA-------GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTV 133 (243)
Q Consensus 71 ~~~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~ 133 (243)
++.++++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+. ++..+||++||.+.+
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL 169 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 9988876 58999999997443 234567789999999999999887653 213589999998755
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-------
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL------- 203 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~------- 203 (243)
.+.+ ....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++......
T Consensus 170 ~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 227 (286)
T 3uve_A 170 KAYP----------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP 227 (286)
T ss_dssp SCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred cCCC----------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence 3321 2346999999999999999887 5899999999999998643210
Q ss_pred ---CCcHHHHHHHH-hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 204 ---AGSVRGTLAMV-MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 204 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
........... .....+ ..+.+++|+|+++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~p------~r~~~p~dvA~~v~fL 264 (286)
T 3uve_A 228 DLENPGPDDMAPICQMFHTLP------IPWVEPIDISNAVLFF 264 (286)
T ss_dssp TSSSCCHHHHHHHHHTTCSSS------CSCBCHHHHHHHHHHH
T ss_pred cccccchhhHHHHHHhhhccC------CCcCCHHHHHHHHHHH
Confidence 00000000100 011111 3789999999999886
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-26 Score=181.25 Aligned_cols=197 Identities=17% Similarity=0.165 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+||||||+|+||++++++|+++|++|++++|+.. .. ......+++|++|.+++.++++
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~-~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEK-SD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC---C------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch-hc------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999433 11 1256789999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (269)
T 3vtz_A 80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATK---------- 148 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence 58999999997543 23355677899999999999887655 34 57999999987654321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCC-------CCCcHHHHHHHHhcCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMVMGNR 218 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+. ++++++++||.+.++..... ............ ...
T Consensus 149 ------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 215 (269)
T 3vtz_A 149 ------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW-GRQ 215 (269)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHH-HHH
T ss_pred ------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHH-Hhc
Confidence 23569999999999999999886 89999999999998742110 000001111111 111
Q ss_pred cccccccCcCceeHHHHHHhhhcc
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+ ...+.+++|+|+++++|
T Consensus 216 ~p-----~~r~~~pedvA~~v~~L 234 (269)
T 3vtz_A 216 HP-----MGRIGRPEEVAEVVAFL 234 (269)
T ss_dssp ST-----TSSCBCHHHHHHHHHHH
T ss_pred CC-----CCCCcCHHHHHHHHHHH
Confidence 12 23788999999999876
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=180.88 Aligned_cols=205 Identities=12% Similarity=0.086 Sum_probs=149.7
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+ |+||++++++|+++|++|++++|+. ........+... ...+.++.+|++|.+++.++++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 56899999999 9999999999999999999999944 222222322221 1247889999999999888876
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.- +-++||++||.+.+.+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 152 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-------- 152 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--------
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC--------
Confidence 57999999996531 2345577899999999999999998862 02599999997654322
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+.++...... . ........... .++
T Consensus 153 --------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~-~p~ 215 (275)
T 2pd4_A 153 --------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-D-FRMILKWNEIN-APL 215 (275)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-T-HHHHHHHHHHH-STT
T ss_pred --------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-c-cHHHHHHHHhc-CCc
Confidence 123469999999999999998775 899999999999998643221 1 11111111111 112
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+++|+|++++++
T Consensus 216 ~-----~~~~p~dva~~~~~l 231 (275)
T 2pd4_A 216 R-----KNVSLEEVGNAGMYL 231 (275)
T ss_dssp S-----SCCCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 2 578999999998875
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=180.93 Aligned_cols=202 Identities=17% Similarity=0.170 Sum_probs=147.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +++...... ... .++.++.+|++|.+++.++++
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESGGRALE--QEL----PGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh----cCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999999999999 543322221 111 247899999999999988876
Q ss_pred -cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. . .++||++||.....+.+
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 149 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQA---------- 149 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCT----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCC----------
Confidence 58999999997532 223456789999999999999988652 2 36999999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC---CCCcHHHHHHHHhcCcccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ---LAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.++++..... ............. ..++
T Consensus 150 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p~ 215 (270)
T 1yde_A 150 ------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML--AQPL 215 (270)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH--TSTT
T ss_pred ------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhh--cCCC
Confidence 2246999999999999999876 589999999999999742110 0111111111111 1122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+.+|+|++++++
T Consensus 216 ~-----r~~~p~dva~~v~~L 231 (270)
T 1yde_A 216 G-----RMGQPAEVGAAAVFL 231 (270)
T ss_dssp S-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 578999999998876
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-26 Score=182.71 Aligned_cols=206 Identities=17% Similarity=0.198 Sum_probs=145.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|+++.+++.+...... .+.. .+.++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE---SGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999887553554332222 1222 24578999999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEEecceeeecCCCCcccc
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG------TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+.- ..++||++||.+++.+.+.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----- 176 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT----- 176 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-----
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-----
Confidence 57999999997543 2345567899999999999988876541 1468999999876543311
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... ......... ...+
T Consensus 177 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~-~~~~ 236 (272)
T 4e3z_A 177 ----------------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG---LPDRAREMA-PSVP 236 (272)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCT
T ss_pred ----------------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC---ChHHHHHHh-hcCC
Confidence 12459999999999999998775 899999999999998543210 010111111 1111
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ..+.+++|+|++++++
T Consensus 237 ~-----~~~~~~edvA~~i~~l 253 (272)
T 4e3z_A 237 M-----QRAGMPEEVADAILYL 253 (272)
T ss_dssp T-----SSCBCHHHHHHHHHHH
T ss_pred c-----CCCcCHHHHHHHHHHH
Confidence 2 2678899999999876
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-26 Score=180.81 Aligned_cols=196 Identities=18% Similarity=0.165 Sum_probs=145.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++|+... +.++.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999994331 2367899999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||.+++.+.
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 140 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIIT----------- 140 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCC-----------
Confidence 58999999997543 233457789999999999998887653 4 5799999998654322
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC--ccEEEEccCceeCCCCCCCCC----CcH---HHHHHHHhcCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG--LDLVTIIPSFVTGPFICPQLA----GSV---RGTLAMVMGNR 218 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g--i~~~~~rp~~i~G~~~~~~~~----~~~---~~~~~~~~~~~ 218 (243)
++...|+.+|.+.+.+.+.++.+.+ +++++++||.+.++....... ..- ........ ..
T Consensus 141 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 208 (264)
T 2dtx_A 141 -----------KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWG-HE 208 (264)
T ss_dssp -----------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHH-HH
T ss_pred -----------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHH-hc
Confidence 1335699999999999999988765 999999999998863211000 000 00001110 01
Q ss_pred cccccccCcCceeHHHHHHhhhcc
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+ ...+++++|+|++++++
T Consensus 209 ~p-----~~~~~~p~dvA~~v~~l 227 (264)
T 2dtx_A 209 HP-----MQRIGKPQEVASAVAFL 227 (264)
T ss_dssp ST-----TSSCBCHHHHHHHHHHH
T ss_pred CC-----CCCCcCHHHHHHHHHHH
Confidence 11 23689999999999875
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-26 Score=182.98 Aligned_cols=214 Identities=17% Similarity=0.141 Sum_probs=150.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc---------hhhchhhhh-hcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP---------EQKRDLSFL-TNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
++|+++||||+|+||++++++|+++|++|++++|+.. ...+.+... ......+.++.++.+|++|.+++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 5689999999999999999999999999999988311 011111111 111123467899999999999998
Q ss_pred HHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCC
Q 026091 74 AAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~ 137 (243)
++++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+. ++..+||++||.+.+.+.+
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 169 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP 169 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence 8876 48999999997543 234567789999999999998875543 2235899999987543321
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++..... .........
T Consensus 170 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~ 224 (277)
T 3tsc_A 170 ----------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD---MVTAVGQAM 224 (277)
T ss_dssp ----------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH---HHHHHHHHH
T ss_pred ----------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch---hhhhhhhcc
Confidence 23569999999999999998774 89999999999999853221 011111111
Q ss_pred hcCcc---ccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNRE---EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~---~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+. .+.......+.+++|+|+++++|
T Consensus 225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L 255 (277)
T 3tsc_A 225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWL 255 (277)
T ss_dssp HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHH
T ss_pred cccHHHHHHhhhccCCCCCCHHHHHHHHHHH
Confidence 11111 11111112589999999999886
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=193.33 Aligned_cols=197 Identities=17% Similarity=0.147 Sum_probs=138.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-CCChhhHHHHhccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-LNNPESFDAAIAGC 79 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~d~~~~~~~~~~~ 79 (243)
|+.++|+|+||||||+||++++++|+++|++|++++|+.. .. ....+.. ..+++++.+| ++|.+++.++++++
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~-~~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~ 74 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-GL-IAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGA 74 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-SH-HHHHHHT----STTEEEEESCCTTCHHHHHHHHTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC-hh-hHHHHhh----cCCcEEEECCccCCHHHHHHHHhcC
Confidence 5433679999999999999999999999999999999433 22 0111211 1368999999 99999999999999
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|+|||+++.... +.|..+ .+++++|++.+++++|||+||.+.. .. .+ +
T Consensus 75 d~Vi~~a~~~~~----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~-~~-------~~-------------~ 122 (352)
T 1xgk_A 75 HLAFINTTSQAG----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS-LY-------GP-------------W 122 (352)
T ss_dssp SEEEECCCSTTS----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG-GT-------SS-------------C
T ss_pred CEEEEcCCCCCc----------HHHHHH-HHHHHHHHHcCCccEEEEeCCcccc-cc-------CC-------------C
Confidence 999999875321 225555 8999999988657899999997520 11 00 1
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc----ccccccCcCceeH-HH
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE----EYSMLLNISMVHI-DD 234 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D 234 (243)
+.++|+.+|.++|.+++. .|++++++||+ +||+.........+.. ........ ...+++.++++|+ +|
T Consensus 123 ~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~i~v~~D 195 (352)
T 1xgk_A 123 PAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHD 195 (352)
T ss_dssp CCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred CCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhcccccccc--cccCCCceEEeeccCCCCceeeEecHHH
Confidence 225699999999999876 49999999976 6887644321111100 00011111 1114677899999 89
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+|++++.+
T Consensus 196 va~ai~~~ 203 (352)
T 1xgk_A 196 VGPALLQI 203 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-25 Score=172.78 Aligned_cols=201 Identities=17% Similarity=0.143 Sum_probs=150.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d 80 (243)
+.|+++||||++.||++++++|++.|++|++++| +.+.... ....++..+++|++|+++++++++ ++|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~-~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 80 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGL-DADGVHA--------PRHPRIRREELDITDSQRLQRLFEALPRLD 80 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTSTTS--------CCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999999 4432211 124578999999999999999887 579
Q ss_pred EEEEeeeccCC---CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCchhhhh
Q 026091 81 GVIHVAAPIDI---HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIR 155 (243)
Q Consensus 81 ~vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~ 155 (243)
++|||||...+ .+.+.|...+++|+.++..+.+++.+.- +-.+||++||.+...+.+
T Consensus 81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~------------------ 142 (242)
T 4b79_A 81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA------------------ 142 (242)
T ss_dssp EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS------------------
T ss_pred EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC------------------
Confidence 99999997544 3446688899999999998888765531 026999999986543321
Q ss_pred hcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeH
Q 026091 156 KLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHI 232 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 232 (243)
....|+.||.....+.+.++.+ +||+++.+.||.|..|........ ......... ..++. .+...
T Consensus 143 ----~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~-~~~~~~~~~--~~Plg-----R~g~p 210 (242)
T 4b79_A 143 ----DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD-VEATRRIMQ--RTPLA-----RWGEA 210 (242)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC-HHHHHHHHH--TCTTC-----SCBCH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC-HHHHHHHHh--cCCCC-----CCcCH
Confidence 2246999999999999999877 489999999999999864433222 111112221 22333 78899
Q ss_pred HHHHHhhhccC
Q 026091 233 DDVARAHIFFT 243 (243)
Q Consensus 233 ~Dva~a~~~~~ 243 (243)
+|+|++++||+
T Consensus 211 eeiA~~v~fLa 221 (242)
T 4b79_A 211 PEVASAAAFLC 221 (242)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999874
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=182.20 Aligned_cols=213 Identities=17% Similarity=0.170 Sum_probs=150.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch--------hhchhhhh-hcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE--------QKRDLSFL-TNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|++|||||+|+||++++++|+++|++|++++|+... ..+.+... ......+.++.++++|++|.+++.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 46899999999999999999999999999999884211 01111111 1111224578999999999999988
Q ss_pred Hhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCC
Q 026091 75 AIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~ 138 (243)
+++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+. +...+||++||...+.+.+
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~- 203 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP- 203 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC-
Confidence 876 58999999997543 234567788999999999998887543 2236899999987553321
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC---------C-CC
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ---------L-AG 205 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~---------~-~~ 205 (243)
....|+.+|.+.+.+.+.++.+. |+++++++||.+.++..... . ..
T Consensus 204 ---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 262 (317)
T 3oec_A 204 ---------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP 262 (317)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred ---------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence 23569999999999999998874 89999999999999742110 0 00
Q ss_pred cHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 206 SVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
............. .....+++++|+|+++++|+
T Consensus 263 ~~~~~~~~~~~~~-----~~p~~~~~pedvA~av~fL~ 295 (317)
T 3oec_A 263 TREDAAELFSQLT-----LLPIPWVEPEDVSNAVAWLA 295 (317)
T ss_dssp CHHHHHHHHTTTC-----SSSSSSBCHHHHHHHHHHHT
T ss_pred chhHHHHHHhhhc-----cCCCCCCCHHHHHHHHHHHc
Confidence 0000111111110 11147899999999998874
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=185.97 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=147.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcC--CCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNL--PRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+... ....+... ...+.++.++.+|++|.+++.+++++
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999 443222 22222110 01245789999999999999888863
Q ss_pred -----ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 79 -----CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 79 -----~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
+|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||.+ +.+.
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~-------- 165 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGF-------- 165 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCC--------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCC--------
Confidence 8999999995432 233456678999999999999987662 2 46899999976 2221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++++. |++++++|||.++|+................... ..
T Consensus 166 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-- 228 (303)
T 1yxm_A 166 --------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ-KI-- 228 (303)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG-GS--
T ss_pred --------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHh-cC--
Confidence 123469999999999999998874 8999999999999984211111000000000000 01
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+++++|+|++++++
T Consensus 229 ---p~~~~~~~~dvA~~i~~l 246 (303)
T 1yxm_A 229 ---PAKRIGVPEEVSSVVCFL 246 (303)
T ss_dssp ---TTSSCBCTHHHHHHHHHH
T ss_pred ---cccCCCCHHHHHHHHHHH
Confidence 112689999999998875
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=180.76 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=150.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|++.......... ....+.++.++.+|++|.++++++++
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH--ERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH--HHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999986455433222111 11234579999999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++.+.. .+ .++||++||.+.+.+.+
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 170 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF---------- 170 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC----------
Confidence 68999999997543 23455678899999999999887654 34 57999999976553331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++........ ......... .
T Consensus 171 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~-----~ 229 (269)
T 3gk3_A 171 ------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD----VLEAKILPQ-----I 229 (269)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------CCSGGG-----C
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh----HHHHHhhhc-----C
Confidence 23569999999999999988774 89999999999999864432111 000000111 1
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
....+.+++|+|+++++++
T Consensus 230 ~~~~~~~p~dvA~~v~~L~ 248 (269)
T 3gk3_A 230 PVGRLGRPDEVAALIAFLC 248 (269)
T ss_dssp TTSSCBCHHHHHHHHHHHT
T ss_pred CcCCccCHHHHHHHHHHHh
Confidence 2236789999999998764
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=186.50 Aligned_cols=173 Identities=16% Similarity=0.146 Sum_probs=129.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+||||||+|+||++++++|+++|++|++++| +...... ...+... ..+.++.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI-RQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999 5433222 2222221 112378999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEEecceeeecCCCCcc
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---------TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+.. ..++||++||.+++.+.+
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---- 160 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---- 160 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC----
Confidence 46999999996433 2345677899999999999998876643 135799999987654331
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCC
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~ 200 (243)
....|+.||.+.+.+.+.++.+ +|+++++++||.|.++...
T Consensus 161 ------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 204 (319)
T 3ioy_A 161 ------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA 204 (319)
T ss_dssp ------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----
T ss_pred ------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccc
Confidence 2246999999888888877665 4899999999999998543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=178.39 Aligned_cols=202 Identities=15% Similarity=0.153 Sum_probs=146.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+|+++||||+|+||++++++|++.| +.|++++| +.+....+... . +.++.++.+|++|.+++.++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r-~~~~~~~~~~~--~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR-SEAPLKKLKEK--Y---GDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES-CHHHHHHHHHH--H---GGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHHH--h---CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 5899999999999999999999985 78888888 54433222211 1 3478999999999999988876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++. +.+ ++||++||.+.+.+.+
T Consensus 76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~-------- 145 (254)
T 3kzv_A 76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS-------- 145 (254)
T ss_dssp HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC--------
T ss_pred cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC--------
Confidence 57999999997432 2335567899999999999999874 434 6999999987553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCCCCCc-----HHHHHHHHhcCcc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQLAGS-----VRGTLAMVMGNRE 219 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~~~~~-----~~~~~~~~~~~~~ 219 (243)
+...|+.+|.+.+.+.+.++.+. |++++.++||.+.++......... .......... ..
T Consensus 146 --------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (254)
T 3kzv_A 146 --------------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG-LK 210 (254)
T ss_dssp --------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH-HH
T ss_pred --------------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH-HH
Confidence 23569999999999999999775 999999999999998654432111 1111111111 11
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.. .+.+++|+|+++++|
T Consensus 211 ~~~-----r~~~p~dva~~v~~L 228 (254)
T 3kzv_A 211 ENN-----QLLDSSVPATVYAKL 228 (254)
T ss_dssp TTC---------CHHHHHHHHHH
T ss_pred hcC-----CcCCcccHHHHHHHH
Confidence 222 689999999999876
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=180.31 Aligned_cols=204 Identities=19% Similarity=0.218 Sum_probs=147.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc---hhhhh-hcCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR---DLSFL-TNLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
|..++|+++||||+|+||++++++|+++|++|++++|+...... .+... ......+.++.++++|++|.+++.+++
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 45567899999999999999999999999999999995432111 00000 111112457899999999999988887
Q ss_pred c-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEEecceeeecCCCCcc
Q 026091 77 A-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 77 ~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
+ ++|++||+||.... .+.+.+...+++|+.++.++++++.+.- ..++||++||...+.+..
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 160 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW---- 160 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC----
Confidence 6 68999999997543 2335566788899999999999887652 156999999976543220
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCc-eeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSF-VTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~-i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||. +-.+. . ......
T Consensus 161 -----------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-----------~-~~~~~~ 211 (285)
T 3sc4_A 161 -----------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-----------V-QNLLGG 211 (285)
T ss_dssp -----------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-----------H-HHHHTS
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-----------H-Hhhccc
Confidence 12356999999999999999887 589999999994 43321 1 111122
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..... .+...+|+|++++++
T Consensus 212 ~~~~~-----r~~~pedvA~~~~~l 231 (285)
T 3sc4_A 212 DEAMA-----RSRKPEVYADAAYVV 231 (285)
T ss_dssp CCCCT-----TCBCTHHHHHHHHHH
T ss_pred ccccc-----CCCCHHHHHHHHHHH
Confidence 22222 678899999998876
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=184.38 Aligned_cols=196 Identities=18% Similarity=0.161 Sum_probs=144.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.... .....+.+|++|.+++.++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 92 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADR-AVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGL 92 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSS-CCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999999999 43211 122455899999988887765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++ ++.+ .++||++||.+++.+.+
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 161 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP---------- 161 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC----------
Confidence 58999999997543 334567788999999999999987 4445 67999999976553321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC---CCCcHHHHHHHHhcCcccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ---LAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~ 221 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.+.++..... ............ ....+.
T Consensus 162 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 228 (266)
T 3uxy_A 162 ------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL-GRTVPL 228 (266)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH-HTTSTT
T ss_pred ------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHH-HhcCCC
Confidence 23569999999999999998774 89999999999998742110 000001111111 111222
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|++++++
T Consensus 229 -----~r~~~pedvA~~v~~L 244 (266)
T 3uxy_A 229 -----GRIAEPEDIADVVLFL 244 (266)
T ss_dssp -----SSCBCHHHHHHHHHHH
T ss_pred -----CCCcCHHHHHHHHHHH
Confidence 3789999999999876
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-26 Score=182.50 Aligned_cols=209 Identities=14% Similarity=0.073 Sum_probs=150.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+....... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK---NGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH---hCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999954332221 122222 24578999999999998888765
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS--GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+. + .++||++||...+....
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 172 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAV----------- 172 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSC-----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCC-----------
Confidence 57999999997543 234567789999999999999999886 4 57999999976442221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC----C---CcHHHHHHHHhc-C
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL----A---GSVRGTLAMVMG-N 217 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~----~---~~~~~~~~~~~~-~ 217 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... + .........+.. .
T Consensus 173 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T 1g0o_A 173 ----------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ 242 (283)
T ss_dssp ----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc
Confidence 01356999999999999998876 4899999999999987421100 0 000011111111 0
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+. ..+.+++|+|++++++
T Consensus 243 ~~p~-----~r~~~p~dvA~~v~~l 262 (283)
T 1g0o_A 243 WSPL-----RRVGLPIDIARVVCFL 262 (283)
T ss_dssp SCTT-----CSCBCHHHHHHHHHHH
T ss_pred CCCC-----CCCcCHHHHHHHHHHH
Confidence 1112 2688999999999876
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-25 Score=179.96 Aligned_cols=211 Identities=17% Similarity=0.120 Sum_probs=150.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch--------hhchhhhh-hcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE--------QKRDLSFL-TNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|+++||||+|+||++++++|++.|++|++++|+... ..+.+... ......+.++.++++|++|.+++.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 46899999999999999999999999999999984210 01111111 1111224679999999999999988
Q ss_pred Hhc-------cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCC
Q 026091 75 AIA-------GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~ 137 (243)
+++ ++|++||+||.... .+.+.+...+++|+.++.++.+++.+. +...+||++||.+.+.+.+
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~ 186 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE 186 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence 876 58999999996543 234557789999999999999987653 2246999999977553321
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCC----------C
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQL----------A 204 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~----------~ 204 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... .
T Consensus 187 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 244 (299)
T 3t7c_A 187 ----------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN 244 (299)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred ----------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence 23469999999999999998875 899999999999998643210 0
Q ss_pred CcHHHHHHHH-hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 205 GSVRGTLAMV-MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 205 ~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.......... .....+ ..+..++|+|+++++|
T Consensus 245 ~~~~~~~~~~~~~~~~p------~r~~~pedvA~~v~fL 277 (299)
T 3t7c_A 245 PTVEDFQVASRQMHVLP------IPYVEPADISNAILFL 277 (299)
T ss_dssp CCHHHHHHHHHHHSSSS------CSCBCHHHHHHHHHHH
T ss_pred chhhHHHHHhhhhcccC------cCCCCHHHHHHHHHHH
Confidence 0011110000 001111 2688999999999886
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=177.75 Aligned_cols=192 Identities=21% Similarity=0.214 Sum_probs=142.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+.. ..+.++.+|++|++++++++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYR-SGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETH 85 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 43211 1368899999999998888764
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+.+.+.
T Consensus 86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----------- 153 (253)
T 2nm0_A 86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS----------- 153 (253)
T ss_dssp CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----------
Confidence 6999999997533 24566779999999999999887654 35 6799999997654221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.......... ..... ..++.
T Consensus 154 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~-~~p~~-- 215 (253)
T 2nm0_A 154 -----------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQR----ANIVS-QVPLG-- 215 (253)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CH----HHHHT-TCTTC--
T ss_pred -----------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHH----HHHHh-cCCCC--
Confidence 01245999999999999999877 47999999999998875322111111 11111 11122
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 216 ---~~~~p~dvA~~i~~l 230 (253)
T 2nm0_A 216 ---RYARPEEIAATVRFL 230 (253)
T ss_dssp ---SCBCHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHH
Confidence 689999999998875
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=182.33 Aligned_cols=198 Identities=17% Similarity=0.156 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|++ .|+.|+++.|+.... ...+.++.+|++|.+++.++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 69 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIKNV 69 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHHhC
Confidence 578999999999999999999999 789999888833211 2367899999999999999886
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||...+.+.+
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------------- 135 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP-------------- 135 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT--------------
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC--------------
Confidence 68999999997542 2345677889999999999999988764 124899999987553321
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc-------HHHHHHHHhcCcccc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS-------VRGTLAMVMGNREEY 221 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~-------~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......... ........ ....+.
T Consensus 136 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 206 (244)
T 4e4y_A 136 --------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE-EKEFPL 206 (244)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH-HTTSTT
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHH-hhcCCC
Confidence 2346999999999999999875 5899999999999987421110000 00011111 111122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|++++++
T Consensus 207 -----~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 207 -----NRIAQPQEIAELVIFL 222 (244)
T ss_dssp -----SSCBCHHHHHHHHHHH
T ss_pred -----CCCcCHHHHHHHHHHH
Confidence 3789999999999876
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=176.47 Aligned_cols=211 Identities=22% Similarity=0.255 Sum_probs=152.0
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++.|+++||||++.||++++++|++.|++|++.+|+.+. ......+.. .+.+..++.+|++|+++++++++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-GAFLDALAQ---RQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-HHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-HHHHHHHHh---cCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999995443 323333322 24578999999999998888875
Q ss_pred ---cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 ---GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.|...+++|+.++..+.+++.+.- .-.+||++||.+...+.+
T Consensus 80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------- 148 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG----------- 148 (258)
T ss_dssp HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS-----------
T ss_pred HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC-----------
Confidence 47999999997443 3346678899999999999888765431 026899999987653331
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc--HHHHHHHHhcCcccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS--VRGTLAMVMGNREEYSM 223 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+......... ...........-+ +
T Consensus 149 -----------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p-l-- 214 (258)
T 4gkb_A 149 -----------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVP-L-- 214 (258)
T ss_dssp -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCT-T--
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCC-C--
Confidence 2346999999999999999877 4899999999999988644332110 0011111111111 1
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.+...+|+|++++||+
T Consensus 215 --g~R~g~peeiA~~v~fLa 232 (258)
T 4gkb_A 215 --GRRFTTPDEIADTAVFLL 232 (258)
T ss_dssp --TTSCBCHHHHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHHHh
Confidence 126889999999998873
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-25 Score=180.63 Aligned_cols=205 Identities=13% Similarity=0.015 Sum_probs=151.7
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+| +||++++++|+++|++|++++| +.+..+....+... ...+.++++|++|.+++.++++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYL-SETFKKRVDPLAES---LGVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---HTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 468999999997 9999999999999999999999 44333333322221 2356899999999999988886
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +..+||++||.+.+.+.+
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~------- 177 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP------- 177 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-------
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC-------
Confidence 47999999997531 3345677899999999999999988764 135999999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... .......... ...+.
T Consensus 178 ---------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~-~~~p~ 239 (296)
T 3k31_A 178 ---------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS--DFHYILTWNK-YNSPL 239 (296)
T ss_dssp ---------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH--HHHHHHHHHH-HHSTT
T ss_pred ---------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc--chHHHHHHHH-hcCCC
Confidence 23569999999999999998774 899999999999998643321 0111111111 11222
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+..++|+|+++++|
T Consensus 240 ~-----r~~~pedvA~~v~fL 255 (296)
T 3k31_A 240 R-----RNTTLDDVGGAALYL 255 (296)
T ss_dssp S-----SCCCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 2 678999999999886
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=184.70 Aligned_cols=207 Identities=13% Similarity=0.160 Sum_probs=145.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhh-cCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT-NLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|+++||||+|+||++++++|+++|++|+++.| .....+.+..+. .....+.++.++.+|++|.+++.++++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYH-QAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEES-CGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-CccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999988 433222222221 122235578999999999999998886
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.- ..++||++||.+.+.+.+
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~------------ 156 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG------------ 156 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC------------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC------------
Confidence 58999999997543 2345677889999999999999998751 146899999977554332
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++......... .... .....+.
T Consensus 157 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~-~~~~~~~----- 217 (262)
T 3ksu_A 157 ----------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE---STAF-HKSQAMG----- 217 (262)
T ss_dssp ----------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CC-----
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH---HHHH-HHhcCcc-----
Confidence 22459999999999999999885 899999999999886422211100 0000 0111112
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|+++++|
T Consensus 218 ~r~~~pedvA~~v~~L 233 (262)
T 3ksu_A 218 NQLTKIEDIAPIIKFL 233 (262)
T ss_dssp CCSCCGGGTHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 2678999999998876
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-25 Score=175.29 Aligned_cols=198 Identities=19% Similarity=0.238 Sum_probs=144.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|+.. .. .. .. ++.++.+|++| +++.++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~-~~--~~---~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g 69 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-EA--AQ---SL-----GAVPLPTDLEK-DDPKGLVKRALEALG 69 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-HH--HH---HH-----TCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HH--HH---hh-----CcEEEecCCch-HHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999999443 21 11 11 27889999999 77776654
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++. +.+ .++||++||.+++.+..
T Consensus 70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 137 (239)
T 2ekp_A 70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG----------- 137 (239)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC-----------
Confidence 68999999996532 2334577899999999999988774 345 68999999987543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
.++...|+.+|.+.+.+.+.++.+. |++++++|||.+.++........ ......... ..+.
T Consensus 138 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~-~~p~---- 201 (239)
T 2ekp_A 138 ---------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN--PELYEPITA-RIPM---- 201 (239)
T ss_dssp ---------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--HHHHHHHHT-TCTT----
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC--HHHHHHHHh-cCCC----
Confidence 0133569999999999999998774 89999999999999853211000 111111111 1112
Q ss_pred CcCceeHHHHHHhhhccC
Q 026091 226 NISMVHIDDVARAHIFFT 243 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~~ 243 (243)
..+.+++|+|+++++++
T Consensus 202 -~~~~~~~dvA~~~~~l~ 218 (239)
T 2ekp_A 202 -GRWARPEEIARVAAVLC 218 (239)
T ss_dssp -SSCBCHHHHHHHHHHHT
T ss_pred -CCCcCHHHHHHHHHHHc
Confidence 26889999999998763
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=176.99 Aligned_cols=192 Identities=19% Similarity=0.175 Sum_probs=141.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+.. . .+..+.+|++|.+++.++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~---~----------~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-GSGAP---K----------GLFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SSCCC---T----------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHH---H----------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 43211 1 22248899999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+ .+ .++||++||...+.+.+
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG---------- 148 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCC----------
Confidence 47999999997542 23456778999999999999887764 44 67999999986554321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... . ........ ...+.
T Consensus 149 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~-~~~p~--- 208 (247)
T 1uzm_A 149 ------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-D---ERIQQGAL-QFIPA--- 208 (247)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-C---HHHHHHHG-GGCTT---
T ss_pred ------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-C---HHHHHHHH-hcCCC---
Confidence 2346999999999999998877 489999999999988742111 0 11111111 11112
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 209 --~~~~~~~dvA~~~~~l 224 (247)
T 1uzm_A 209 --KRVGTPAEVAGVVSFL 224 (247)
T ss_dssp --CSCBCHHHHHHHHHHH
T ss_pred --CCCcCHHHHHHHHHHH
Confidence 2689999999998875
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-25 Score=179.38 Aligned_cols=205 Identities=13% Similarity=0.040 Sum_probs=149.4
Q ss_pred CCCeEEEecCchh--hHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGF--IGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+|+ ||++++++|++.|++|++++| +....+....+... ..++.++.+|++|.+++.++++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ-GDALKKRVEPLAEE---LGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC-SHHHHHHHHHHHHH---HTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999988 999999999999999999999 44333333332221 2368899999999999988876
Q ss_pred ---cccEEEEeeeccC---------CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPID---------IHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||... ..+.+.+...+++|+.++.++++++.+.. +..+||++||.+.+.+.+
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------- 178 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP------- 178 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT-------
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC-------
Confidence 5799999999753 13345677899999999999999988753 135999999977553321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++....... ......... ...++
T Consensus 179 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~-~~~p~ 240 (293)
T 3grk_A 179 ---------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD--FRYILKWNE-YNAPL 240 (293)
T ss_dssp ---------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC--HHHHHHHHH-HHSTT
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc--hHHHHHHHH-hcCCC
Confidence 2346999999999999999877 48999999999999985433211 111111111 11122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+..++|+|+++++|
T Consensus 241 ~-----r~~~pedvA~~v~~L 256 (293)
T 3grk_A 241 R-----RTVTIDEVGDVGLYF 256 (293)
T ss_dssp S-----SCCCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 2 688999999999876
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-25 Score=174.48 Aligned_cols=194 Identities=18% Similarity=0.168 Sum_probs=145.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. ..+.++.++.+|++|++++.++++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGAR-SVDRLEKIAHELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999 5433222 222211 124578999999999999999887
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+. + ..++|++||.......+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~----------- 146 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIP----------- 146 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCT-----------
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCC-----------
Confidence 57999999997543 234567789999999999999987653 2 35788888765432221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.+|.+.+.+.+.+..+ +|++++.++||.+.++....... .... .
T Consensus 147 -----------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-------------~~~~-----~ 197 (235)
T 3l77_A 147 -----------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG-------------KPKE-----K 197 (235)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-------------CCGG-----G
T ss_pred -----------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC-------------cccc-----c
Confidence 2246999999999999998655 48999999999998875433211 0111 1
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
.++.++|+|++++++
T Consensus 198 ~~~~p~dva~~v~~l 212 (235)
T 3l77_A 198 GYLKPDEIAEAVRCL 212 (235)
T ss_dssp TCBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 578899999998876
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-25 Score=174.38 Aligned_cols=196 Identities=15% Similarity=0.146 Sum_probs=148.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
.|+||||||++.||++++++|++.|++|.+++| +++..... .. ...++.++++|++|+++++++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~-~~~~~~~~---~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI-DEKRSADF---AK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH---HT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH---HH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999999999999 54332222 11 24578999999999998888875
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++|++||+||.... .+.+++...+++|+.++..+.+++.+.- .-.+||++||.....+.+
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~------------- 141 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP------------- 141 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT-------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC-------------
Confidence 47999999986543 3456788899999999999888766541 126999999976543321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNIS 228 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
....|+.||.....+.+.++.+. +++++.+.||.+-.+..... .... .. ..++. .
T Consensus 142 ---------~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~----~~~~---~~--~~Pl~-----R 198 (247)
T 3ged_A 142 ---------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF----TQED---CA--AIPAG-----K 198 (247)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C----CHHH---HH--TSTTS-----S
T ss_pred ---------CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH----HHHH---Hh--cCCCC-----C
Confidence 22469999999999999998775 79999999999987653322 1111 11 12333 6
Q ss_pred ceeHHHHHHhhhccC
Q 026091 229 MVHIDDVARAHIFFT 243 (243)
Q Consensus 229 ~i~v~Dva~a~~~~~ 243 (243)
+...+|+|+++++|+
T Consensus 199 ~g~pediA~~v~fL~ 213 (247)
T 3ged_A 199 VGTPKDISNMVLFLC 213 (247)
T ss_dssp CBCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHH
Confidence 889999999999873
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-25 Score=175.21 Aligned_cols=208 Identities=12% Similarity=0.048 Sum_probs=152.8
Q ss_pred CCCCeEEEecCchh--hHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 3 EEKGRVCVTGGTGF--IGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
.++|+++||||+|+ ||++++++|+++|++|++++| +....+....+.... ...++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA-GERLEKSVHELAGTL-DRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHTS-SSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC-chHHHHHHHHHHHhc-CCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 35789999999987 999999999999999999999 443333333332211 12378999999999999888876
Q ss_pred ----cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||.+.+.+.+
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 156 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP------ 156 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC------
Confidence 57999999997541 2345566789999999999999998864 135899999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++....... .......... ..+
T Consensus 157 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~-~~~ 217 (266)
T 3oig_A 157 ----------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD--FNSILKDIEE-RAP 217 (266)
T ss_dssp ----------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT--HHHHHHHHHH-HST
T ss_pred ----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc--hHHHHHHHHh-cCC
Confidence 23469999999999999998774 8999999999999975443211 1111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. .+.+++|+|++++++
T Consensus 218 ~~-----~~~~p~dva~~v~~l 234 (266)
T 3oig_A 218 LR-----RTTTPEEVGDTAAFL 234 (266)
T ss_dssp TS-----SCCCHHHHHHHHHHH
T ss_pred CC-----CCCCHHHHHHHHHHH
Confidence 22 678999999998876
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-26 Score=180.53 Aligned_cols=200 Identities=19% Similarity=0.186 Sum_probs=148.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... ..++.++.+|++|.+++++++++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERLLAEAV--AAL---EAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999 543322211 111 14788999999999999888763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
+|++||+||.... .+.+.+...+++|+.++.++++++.+.. +.++||++||.+++ +.+
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~------------- 144 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF------------- 144 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-------------
Confidence 6999999997543 2234566789999999999999988753 13699999998754 210
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... .......... .+..
T Consensus 145 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~-~p~~----- 205 (263)
T 2a4k_A 145 ---------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP----PWAWEQEVGA-SPLG----- 205 (263)
T ss_dssp ---------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC----HHHHHHHHHT-STTC-----
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC----HHHHHHHHhc-CCCC-----
Confidence 2246999999999999998876 4899999999999998643321 1111111111 1222
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 206 ~~~~p~dvA~~v~~l 220 (263)
T 2a4k_A 206 RAGRPEEVAQAALFL 220 (263)
T ss_dssp SCBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 688999999998875
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=176.24 Aligned_cols=198 Identities=20% Similarity=0.276 Sum_probs=140.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
|+++||||+|+||++++++|+++|++|++++| +.+...... ... ..++.++.+|++|.+++.++++ +
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 74 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQERLQELK--DEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCN 74 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999 543322221 111 2368999999999999999886 5
Q ss_pred ccEEEEeeeccC-C-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 CTGVIHVAAPID-I-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 ~d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|++||+||... . .+.+++...+++|+.++.++.+++.+ .+ .++||++||.+.+.+.
T Consensus 75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~------------ 141 (248)
T 3asu_A 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY------------ 141 (248)
T ss_dssp CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC------------
T ss_pred CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCC------------
Confidence 799999999752 1 23456778999999999999887763 44 5799999997654222
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCcee-CCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVT-GPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+. .+......... . ... .. .+
T Consensus 142 ----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~---~~~--~~-~~--- 201 (248)
T 3asu_A 142 ----------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-D---GKA--EK-TY--- 201 (248)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-h---HHH--HH-HH---
Confidence 123569999999999999998773 8999999999999 45421110000 0 000 00 00
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....+++++|+|++++++
T Consensus 202 ~~~~~~~p~dvA~~v~~l 219 (248)
T 3asu_A 202 QNTVALTPEDVSEAVWWV 219 (248)
T ss_dssp ---CCBCHHHHHHHHHHH
T ss_pred hccCCCCHHHHHHHHHHH
Confidence 011357999999998876
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=176.93 Aligned_cols=190 Identities=15% Similarity=0.068 Sum_probs=143.8
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---c
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---G 78 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~ 78 (243)
..++|+++||||+|+||++++++|+++|++|++++| +.. +|++|+++++++++ +
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~----------------------~D~~~~~~v~~~~~~~g~ 59 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR-QTG----------------------LDISDEKSVYHYFETIGA 59 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESG-GGT----------------------CCTTCHHHHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecC-Ccc----------------------cCCCCHHHHHHHHHHhCC
Confidence 345689999999999999999999999999999998 441 79999999998886 5
Q ss_pred ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 79 CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 79 ~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+|++||+||.... .+.+.+...+++|+.++.++++++.+.. +-.+||++||.+.+.+.
T Consensus 60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------- 124 (223)
T 3uce_A 60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV--------------- 124 (223)
T ss_dssp EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC---------------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC---------------
Confidence 8999999997521 2345567789999999999999998763 12489999997654332
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC-ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCce
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEEHG-LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV 230 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g-i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (243)
++...|+.+|.+.+.+.+.++.+.+ ++++.++||.+.++.................. ...+.. .+.
T Consensus 125 -------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~ 191 (223)
T 3uce_A 125 -------ANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQ-SHLPVG-----KVG 191 (223)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHH-HHSTTC-----SCB
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHh-hcCCCC-----Ccc
Confidence 1335699999999999999998865 99999999999998654332211111111111 111222 788
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
+++|+|++++++
T Consensus 192 ~~~dvA~~~~~l 203 (223)
T 3uce_A 192 EASDIAMAYLFA 203 (223)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999998875
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.5e-25 Score=176.65 Aligned_cols=205 Identities=11% Similarity=0.027 Sum_probs=151.2
Q ss_pred CCCeEEEecCchh--hHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGF--IGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+++||||+|+ ||++++++|+++|++|++++|+. ..+.+..+.. ...++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCA---EFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHG---GGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHH---hcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 4689999999966 99999999999999999999944 2222333322 12368999999999999888876
Q ss_pred ---cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCccc
Q 026091 78 ---GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.. +..+||++||.+.+.+.
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------ 173 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM------ 173 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC------
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC------
Confidence 36999999997543 3445566789999999999999887652 14699999997654332
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++....... .......... ..
T Consensus 174 ----------------~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~-~~ 234 (280)
T 3nrc_A 174 ----------------PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN--FKKMLDYNAM-VS 234 (280)
T ss_dssp ----------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT--HHHHHHHHHH-HS
T ss_pred ----------------CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc--hHHHHHHHHh-cC
Confidence 12356999999999999998877 58999999999999986443311 1111111111 11
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+.. .+.+++|+|+++++++
T Consensus 235 p~~-----~~~~pedvA~~v~~l~ 253 (280)
T 3nrc_A 235 PLK-----KNVDIMEVGNTVAFLC 253 (280)
T ss_dssp TTC-----SCCCHHHHHHHHHHTT
T ss_pred CCC-----CCCCHHHHHHHHHHHh
Confidence 222 6889999999998874
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=186.46 Aligned_cols=201 Identities=18% Similarity=0.206 Sum_probs=136.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+|+|+||||||++|++++++|++.|++|++++|+.... ......+... ...+++++.+|++|++++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF--KQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH--HTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH--HhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999953210 1111111111 12478999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+++..... .|+.++.+++++|++.+++++||+ |+ ++... .. . + .+ ..+....
T Consensus 82 ~~a~~~~~~----------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~-~~--~-~-~~--------~~p~~~~ 134 (313)
T 1qyd_A 82 SALAGGVLS----------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDP-DI--M-E-HA--------LQPGSIT 134 (313)
T ss_dssp ECCCCSSSS----------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCT-TS--C-C-CC--------CSSTTHH
T ss_pred ECCccccch----------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCc-cc--c-c-cC--------CCCCcch
Confidence 999875431 267778999999999876889985 43 22111 10 0 0 10 0112345
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhhhc
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~ 241 (243)
| .+|..+|.+++. .|++++++||+.++|+......... . .....+....+. ++..++++|++|+|++++.
T Consensus 135 y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~ 206 (313)
T 1qyd_A 135 F-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK 206 (313)
T ss_dssp H-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHH
Confidence 8 999999998864 6999999999999886322111100 0 000011122222 2557899999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 207 ~ 207 (313)
T 1qyd_A 207 S 207 (313)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=178.11 Aligned_cols=168 Identities=17% Similarity=0.164 Sum_probs=131.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+..... ..+.. .+.++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAEASVRE---KGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHT---TTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 54332221 22221 24578999999999998888776
Q ss_pred --cccEEEEeeecc-CC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPI-DI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.. .. ...+++...+++|+.++.++++++.+. + .++||++||..++.+.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 152 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPP-------- 152 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCT--------
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC--------
Confidence 589999999865 21 234556789999999999998887654 4 57999999976553321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCC
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.
T Consensus 153 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 194 (262)
T 1zem_A 153 --------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF 194 (262)
T ss_dssp --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence 2246999999999999998866 48999999999998764
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-26 Score=180.81 Aligned_cols=212 Identities=14% Similarity=0.096 Sum_probs=137.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----CT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d 80 (243)
||+|+||||+|+||++++++|+++|++|++++|+.. .. . . . +.+|++|.+++.+++++ +|
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-~~---~----------~-~-~~~Dl~~~~~v~~~~~~~~~~id 64 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA-EV---I----------A-D-LSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS-SE---E----------C-C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch-hh---c----------c-c-cccCCCCHHHHHHHHHHhCCCCC
Confidence 478999999999999999999999999999999432 11 0 0 1 67899999999999865 49
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCC---cccccCCCCCchhh
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKD---VDMLDETFWSDVDY 153 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~---~~~~~e~~~~~~~~ 153 (243)
+|||+||.... ..++...+++|+.++.++++++.+ .+ .++||++||.+++...... ...+.+.++.....
T Consensus 65 ~lv~~Ag~~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (257)
T 1fjh_A 65 GLVLCAGLGPQ--TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141 (257)
T ss_dssp EEEECCCCCTT--CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred EEEECCCCCCC--cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence 99999997542 244779999999999999988764 34 5799999998765221100 00000000000000
Q ss_pred -hh--hcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC-ccccccccC
Q 026091 154 -IR--KLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN-REEYSMLLN 226 (243)
Q Consensus 154 -~~--~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 226 (243)
.. ...++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++......... ........ ..++
T Consensus 142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~----- 213 (257)
T 1fjh_A 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGESIAKFVPPM----- 213 (257)
T ss_dssp HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCST-----
T ss_pred hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch---hHHHHHHhccccc-----
Confidence 00 01123457999999999999998876 5899999999999998643221100 00000000 1111
Q ss_pred cCceeHHHHHHhhhccC
Q 026091 227 ISMVHIDDVARAHIFFT 243 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~~ 243 (243)
..+++++|+|+++++++
T Consensus 214 ~~~~~~~dvA~~~~~l~ 230 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLM 230 (257)
T ss_dssp TSCCCTHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHh
Confidence 25899999999998764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=177.74 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=152.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||++.||++++++|++.|++|.+.+|+.....+....+.. .+.++..+++|++|+++++++++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR---KGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 679999999999999999999999999999999943322222233322 35678999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++|||||.... .+.++|...+++|+.++..+.+++.+ .+.-.+||++||.+...+.+
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~---------- 154 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP---------- 154 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC----------
Confidence 47999999997543 34577889999999999998876543 22246999999987543331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+...+.+.++.+ +||+++.+.||.|..+........ +...+... ...++.
T Consensus 155 ------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~-~~~Pl~-- 217 (255)
T 4g81_D 155 ------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQFDSWVK-SSTPSQ-- 217 (255)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHHHHHHH-HHSTTC--
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHHHHHHH-hCCCCC--
Confidence 2246999999999999999877 489999999999998743221111 11111111 122233
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|++++||+
T Consensus 218 ---R~g~pediA~~v~fL~ 233 (255)
T 4g81_D 218 ---RWGRPEELIGTAIFLS 233 (255)
T ss_dssp ---SCBCGGGGHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHHh
Confidence 6889999999998863
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=178.15 Aligned_cols=201 Identities=16% Similarity=0.166 Sum_probs=145.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+...... ... +.++.++++|++|.+++.+++++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAAGQQLA--AEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHH--HHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 543322211 111 34789999999999998888764
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+||.... ...+.+...+++|+.++.++.+.+.+ .+ ++||++||.+++.+.
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~----------- 145 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI----------- 145 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCC-----------
Confidence 6999999997543 23345678899999988877765543 34 799999998754322
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---c--CccEEEEccCceeCCCCCCCC-CCcHHHHHHHHhcC--cc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---H--GLDLVTIIPSFVTGPFICPQL-AGSVRGTLAMVMGN--RE 219 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~--gi~~~~~rp~~i~G~~~~~~~-~~~~~~~~~~~~~~--~~ 219 (243)
++...|+.+|.+.+.+.+.++.+ + |++++++|||.++++...... ..... ...... ..
T Consensus 146 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~ 211 (253)
T 1hxh_A 146 -----------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK---EMVLHDPKLN 211 (253)
T ss_dssp -----------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH---HHHBCBTTTB
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhH---HHHhhhhccC
Confidence 12346999999999999998866 3 899999999999998422100 00000 001110 11
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. ..+.+++|+|++++++
T Consensus 212 p~-----~~~~~~~dvA~~~~~l 229 (253)
T 1hxh_A 212 RA-----GRAYMPERIAQLVLFL 229 (253)
T ss_dssp TT-----CCEECHHHHHHHHHHH
T ss_pred cc-----CCCCCHHHHHHHHHHH
Confidence 11 2689999999999875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=174.61 Aligned_cols=173 Identities=21% Similarity=0.211 Sum_probs=134.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
++|+|+||||+|+||++++++|+++| ++|++++| +......+..+.. ...+++++.+|++|.+++.++++
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r-~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAK---NHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHH---HCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEec-ChhhhHHHHHhhc---cCCceEEEEecCCChHHHHHHHHHHH
Confidence 56899999999999999999999999 99999999 4433222332222 13478999999999999988887
Q ss_pred ------cccEEEEeeeccC-C-----CCCChHHHHHHHHHHHHHHHHHHHHhcC---------C-----ccEEEEEecce
Q 026091 78 ------GCTGVIHVAAPID-I-----HGKEPEEVIIQRAVSGTIGILKSCLKSG---------T-----VKRVVYTSSAS 131 (243)
Q Consensus 78 ------~~d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~~i~~Ss~~ 131 (243)
++|+|||+||... . ...+.+...+++|+.++.++++++.+.. . .++||++||..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 6999999999754 1 2335566789999999999999876541 0 26899999987
Q ss_pred eeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 132 TVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 132 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
++..... .++...|+.+|.+.+.+++.++.+ +|++++++|||.+.++..
T Consensus 176 ~~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 227 (267)
T 1sny_A 176 GSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG 227 (267)
T ss_dssp GCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred ccccCCC-------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC
Confidence 6533210 013356999999999999999877 589999999999988754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=177.61 Aligned_cols=208 Identities=20% Similarity=0.210 Sum_probs=149.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+.++|+++||||+|+||++++++|+++|++|++++| +.+....... . .+.++.++.+|++|.+++.++++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~--~---~~~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDK-SAERLRELEV--A---HGGNAVGVVGDVRSLQDQKRAAERCL 74 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--H---TBTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHH--H---cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 6677899999999999999999999999999999999 5543322221 1 14578999999999998888876
Q ss_pred ----cccEEEEeeeccCCC------CC----ChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcc
Q 026091 78 ----GCTGVIHVAAPIDIH------GK----EPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~~------~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
++|++||+||..... .. +.+...+++|+.++.++++++.+.. +-.++|++||...+.+.+
T Consensus 75 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 150 (281)
T 3zv4_A 75 AAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG---- 150 (281)
T ss_dssp HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS----
T ss_pred HhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC----
Confidence 469999999975321 11 2366788999999999999876542 025999999976543321
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHHH------HHHH
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVRG------TLAM 213 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~~------~~~~ 213 (243)
....|+.+|.+.+.+.+.++.+. .++++.++||.+.++............ ....
T Consensus 151 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 212 (281)
T 3zv4_A 151 ------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADM 212 (281)
T ss_dssp ------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHH
T ss_pred ------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHH
Confidence 23469999999999999998875 499999999999998543221111000 1111
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. ...+.. .+..++|+|+++++|
T Consensus 213 ~~-~~~p~~-----r~~~pedvA~~v~fL 235 (281)
T 3zv4_A 213 LK-SVLPIG-----RMPALEEYTGAYVFF 235 (281)
T ss_dssp HH-HTCTTS-----SCCCGGGGSHHHHHH
T ss_pred HH-hcCCCC-----CCCCHHHHHHHHHHh
Confidence 11 111222 688999999998876
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=183.16 Aligned_cols=201 Identities=16% Similarity=0.143 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC----------CchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS----------DPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
++|++|||||+|+||++++++|+++|++|++++|+ ..........+.. .+.++.++.+|++|.+++.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA---AGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH---TTCEEEEECCCTTSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHH
Confidence 46899999999999999999999999999999984 1111111122222 2457889999999999988
Q ss_pred HHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCC---------ccEEEEEeccee
Q 026091 74 AAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGT---------VKRVVYTSSAST 132 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~Ss~~~ 132 (243)
++++ ++|++||+||.... .+.+.+...+++|+.++.++++++.+... -.+||++||.++
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 8876 68999999997543 33456778999999999999998765420 148999999776
Q ss_pred eecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHH
Q 026091 133 VHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRG 209 (243)
Q Consensus 133 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~ 209 (243)
+.+.+ ....|+.+|.+.+.+.+.++.+ +|++++.++|| +.++...........
T Consensus 183 ~~~~~----------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~- 238 (322)
T 3qlj_A 183 LQGSV----------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA- 238 (322)
T ss_dssp HHCBT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----
T ss_pred ccCCC----------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-
Confidence 53331 2346999999999999999887 58999999999 766654333222111
Q ss_pred HHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 210 TLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ...+.++.++|+|+++++|+
T Consensus 239 -------~~-----~~~~~~~~pedva~~v~~L~ 260 (322)
T 3qlj_A 239 -------TQ-----DQDFDAMAPENVSPLVVWLG 260 (322)
T ss_dssp -----------------CCTTCGGGTHHHHHHHT
T ss_pred -------cc-----ccccCCCCHHHHHHHHHHHh
Confidence 00 11225678999999998864
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=174.35 Aligned_cols=195 Identities=22% Similarity=0.190 Sum_probs=144.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCC--CChhhHHHHhc---
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADL--NNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~--- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+... ...++.++.+|+ +|.+++.++++
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGR-NEEKLRQVASHINEE--TGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433222 2222211 123678999999 89988888876
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||...+.+.+
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------ 160 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA------ 160 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC------
Confidence 58999999997422 2334566889999999999999874 444 67999999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC--ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG--LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g--i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+.+ ++++.+.||.+.++.. ........
T Consensus 161 ----------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~------------~~~~~~~~-- 210 (252)
T 3f1l_A 161 ----------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR------------ASAFPTED-- 210 (252)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH------------HHHCTTCC--
T ss_pred ----------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh------------hhhCCccc--
Confidence 234699999999999999998864 9999999999987621 11111111
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+.+++|+|+++++|
T Consensus 211 ----~~~~~~p~dva~~~~~L 227 (252)
T 3f1l_A 211 ----PQKLKTPADIMPLYLWL 227 (252)
T ss_dssp ----GGGSBCTGGGHHHHHHH
T ss_pred ----hhccCCHHHHHHHHHHH
Confidence 11567889999988776
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=181.14 Aligned_cols=204 Identities=17% Similarity=0.141 Sum_probs=144.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||+|+||++++++|+++|++|++++| +.+... ....+... ....+.++++|++|.+++.++++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGR-RPDVLDAAAGEIGGR--TGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc--CCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 443322 22222211 12246899999999999888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----G-TVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+.+...+++|+.++.++.+++.+. + ...+||++||.+.+.+.
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------- 180 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-------- 180 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC--------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC--------
Confidence 46999999997432 334567789999999999888876653 1 13589999997654332
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
++...|+.+|.+.+.+.+.++.+ +|++++.++||.+.++........ .....
T Consensus 181 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------~~~~~ 235 (281)
T 4dry_A 181 --------------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-----------VLQAN 235 (281)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-----------EECTT
T ss_pred --------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-----------hhhhh
Confidence 13356999999999999999877 589999999999998753221100 00000
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.......++.++|+|+++++|+
T Consensus 236 ~~~~~~~~~~pedvA~~v~fL~ 257 (281)
T 4dry_A 236 GEVAAEPTIPIEHIAEAVVYMA 257 (281)
T ss_dssp SCEEECCCBCHHHHHHHHHHHH
T ss_pred hcccccCCCCHHHHHHHHHHHh
Confidence 0011125789999999998863
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-25 Score=176.03 Aligned_cols=205 Identities=16% Similarity=0.080 Sum_probs=148.5
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
+.|+|+||||+ |+||++++++|+++|++|++++| +....+....+... ..++.++.+|++|.+++.++++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYV-GDRFKDRITEFAAE---FGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEec-chhhHHHHHHHHHH---cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 56899999999 99999999999999999999999 44333333333221 2358899999999999998886
Q ss_pred ---cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ---GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+.- +..+||++||.+.+.+.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 162 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP------ 162 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC------
Confidence 47999999997542 2345567889999999999999988763 135899999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+. |+++++++||.+.++...... .......... ...+
T Consensus 163 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~-~~~~ 223 (271)
T 3ek2_A 163 ----------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK--SFGKILDFVE-SNSP 223 (271)
T ss_dssp ----------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH--HHHHHHHHHH-HHST
T ss_pred ----------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc--chHHHHHHHH-hcCC
Confidence 23569999999999999998764 899999999999997543321 0111111111 1112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. .+..++|+|++++++
T Consensus 224 ~~-----~~~~pedva~~i~~l 240 (271)
T 3ek2_A 224 LK-----RNVTIEQVGNAGAFL 240 (271)
T ss_dssp TS-----SCCCHHHHHHHHHHH
T ss_pred cC-----CCCCHHHHHHHHHHH
Confidence 22 678999999999876
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=176.98 Aligned_cols=184 Identities=13% Similarity=0.119 Sum_probs=141.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
|+|+|+||||+|+||++++++|+++|++|++++|+.. .. .-..+.+|++|.+++.++++.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~-~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN-PN--------------ADHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-TT--------------SSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc-cc--------------cccceEEEeCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999433 11 124578899999998888763
Q ss_pred --ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 --CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 --~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|+|||+||.... ...+.+...+++|+.++.++++++.+.. +-++||++||.+++.+.+
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 153 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS------------ 153 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC------------
Confidence 6999999996432 2234566788999999999999988763 124899999987553321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.. ..... ....
T Consensus 154 ----------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~------------~~~~~-~~~~--- 207 (251)
T 3orf_A 154 ----------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN------------RKYMS-DANF--- 207 (251)
T ss_dssp ----------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH------------HHHCT-TSCG---
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch------------hhhcc-cccc---
Confidence 2356999999999999999877 589999999999988631 11111 1112
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
..+++++|+|++++++
T Consensus 208 --~~~~~~~dva~~i~~l 223 (251)
T 3orf_A 208 --DDWTPLSEVAEKLFEW 223 (251)
T ss_dssp --GGSBCHHHHHHHHHHH
T ss_pred --cccCCHHHHHHHHHHH
Confidence 2688999999998875
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-25 Score=173.92 Aligned_cols=206 Identities=17% Similarity=0.184 Sum_probs=151.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
++|+++||||+|+||++++++|+++|++|+++.+++...... ...+.. .+.++.++.+|++|.++++++++.
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh---cCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999875535433222 222222 245788999999999888877652
Q ss_pred ---------ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 79 ---------CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 79 ---------~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
+|++||+||.... ...+.+...+++|+.++.++++++.+.- ...+||++||.+.+.+.+
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------ 156 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP------ 156 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT------
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC------
Confidence 8999999997543 2344566789999999999999988762 145899999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+ +|++++.++||.+.++.......... ...... ...+
T Consensus 157 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~-~~~~ 217 (255)
T 3icc_A 157 ----------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--MKQYAT-TISA 217 (255)
T ss_dssp ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--HHHHHH-HTST
T ss_pred ----------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--HHHhhh-ccCC
Confidence 2346999999999999999877 48999999999999986554432211 111111 1112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. .+.+++|+|++++++
T Consensus 218 ~~-----~~~~~~dva~~~~~l 234 (255)
T 3icc_A 218 FN-----RLGEVEDIADTAAFL 234 (255)
T ss_dssp TS-----SCBCHHHHHHHHHHH
T ss_pred cC-----CCCCHHHHHHHHHHH
Confidence 22 688999999998875
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=174.70 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=138.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh---cccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI---AGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d 80 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.... . .. ..+.++ +|+ .+++++++ .++|
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~---~---~~----~~~~~~-~D~--~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NEELL---K---RS----GHRYVV-CDL--RKDLDLLFEKVKEVD 83 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHH---H---HT----CSEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHHHH---H---hh----CCeEEE-eeH--HHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999 54221 1 11 256677 999 44444444 4789
Q ss_pred EEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 81 GVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKS----CLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 81 ~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
+|||+||.... ...+.+...+++|+.++.++.+. +++.+ .++||++||.+++.+.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 148 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE-------------- 148 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC--------------
Confidence 99999996443 23455678899999998776554 44556 68999999987653221
Q ss_pred hhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHH-HHhcCccccccccCc
Q 026091 152 DYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLA-MVMGNREEYSMLLNI 227 (243)
Q Consensus 152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 227 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++........ ... .... ..+. .
T Consensus 149 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~-~~p~-----~ 210 (249)
T 1o5i_A 149 --------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVES-QIPM-----R 210 (249)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHHT-TSTT-----S
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh----hHHHHHHh-cCCC-----C
Confidence 2346999999999999998876 589999999999999853211110 111 1111 1122 2
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
.+++++|+|++++++
T Consensus 211 ~~~~~~dvA~~i~~l 225 (249)
T 1o5i_A 211 RMAKPEEIASVVAFL 225 (249)
T ss_dssp SCBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 689999999998875
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=174.07 Aligned_cols=206 Identities=18% Similarity=0.134 Sum_probs=150.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||++.||++++++|++.|++|++.+| +.+..+... .+. +.+...+++|++|+++++++++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r-~~~~l~~~~--~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGR-RKDVLDAAI--AEI---GGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999 544332221 122 4578899999999999888876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++|++|||||.... .+.+.|...+++|+.++..+.+++.+.- +-.+||++||.+...+.+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~------------- 168 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP------------- 168 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC-------------
Confidence 47999999986443 3456788999999999999999887752 135899999976543321
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCc-H--HHHHHHHhcCccccccc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGS-V--RGTLAMVMGNREEYSML 224 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+...+.+.++.+. ||+++.+.||.+..+......... . ..+.+.+. ...++.
T Consensus 169 ---------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~Plg-- 236 (273)
T 4fgs_A 169 ---------AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA-AQVPMG-- 236 (273)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHH-HHSTTS--
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHH-hcCCCC--
Confidence 22469999999999999999884 799999999999988644332111 1 11222221 122333
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|++++||+
T Consensus 237 ---R~g~peeiA~~v~FLa 252 (273)
T 4fgs_A 237 ---RVGRAEEVAAAALFLA 252 (273)
T ss_dssp ---SCBCHHHHHHHHHHHH
T ss_pred ---CCcCHHHHHHHHHHHh
Confidence 6889999999999873
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-24 Score=172.91 Aligned_cols=203 Identities=18% Similarity=0.162 Sum_probs=146.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCC----hhhHHHHhc-
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNN----PESFDAAIA- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~~- 77 (243)
+.|+++||||+|+||++++++|+++|++|++++|+..+.... ...+.. ..+.++.++.+|++| .+++.++++
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK--ERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh--hcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 468999999999999999999999999999999954132222 222210 123578999999999 888888776
Q ss_pred ------cccEEEEeeeccCCC---------------CCChHHHHHHHHHHHHHHHHHHHHhcCC---------ccEEEEE
Q 026091 78 ------GCTGVIHVAAPIDIH---------------GKEPEEVIIQRAVSGTIGILKSCLKSGT---------VKRVVYT 127 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ 127 (243)
++|++||+||..... ..+.+...+++|+.++.++++++.+... ..+||++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 589999999975421 1133557889999999999988776421 3589999
Q ss_pred ecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCC
Q 026091 128 SSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLA 204 (243)
Q Consensus 128 Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~ 204 (243)
||.+++.+. ++...|+.+|.+.+.+.+.++.+. |+++++++||.++++. . ..
T Consensus 180 sS~~~~~~~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~- 234 (288)
T 2x9g_A 180 CDAMVDQPC----------------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG- 234 (288)
T ss_dssp CCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-
T ss_pred ecccccCCC----------------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-
Confidence 997654322 123569999999999999988774 8999999999999986 2 11
Q ss_pred CcHHHHHHHHhcCccccccccCcCc-eeHHHHHHhhhcc
Q 026091 205 GSVRGTLAMVMGNREEYSMLLNISM-VHIDDVARAHIFF 242 (243)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~a~~~~ 242 (243)
-.. ....... .++. .+ ..++|+|++++++
T Consensus 235 --~~~-~~~~~~~-~p~~-----r~~~~pedvA~~v~~l 264 (288)
T 2x9g_A 235 --EEE-KDKWRRK-VPLG-----RREASAEQIADAVIFL 264 (288)
T ss_dssp --HHH-HHHHHHT-CTTT-----SSCCCHHHHHHHHHHH
T ss_pred --hHH-HHHHHhh-CCCC-----CCCCCHHHHHHHHHHH
Confidence 111 1111111 1121 45 7999999999876
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=174.61 Aligned_cols=200 Identities=18% Similarity=0.242 Sum_probs=140.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG------- 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------- 78 (243)
|+++||||+|+||++++++|+++|++|++++| +.+....... .... ..++.++.+|++|.+++.+++++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r-~~~~~~~~~~--~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 97 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGR-REERLQALAG--ELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFAT 97 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999999999 5433222211 1111 14789999999999999999874
Q ss_pred ccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCcc-EEEEEecceeeecCCCCcccccCCC
Q 026091 79 CTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVK-RVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 ~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+||.... .+.+.+...+++|+.++.++.+++. +.+ .+ +||++||...+.+.
T Consensus 98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~----------- 165 (272)
T 2nwq_A 98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPY----------- 165 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCC-----------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCC-----------
Confidence 5999999997432 2335577889999999888777654 445 56 99999997654322
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........... .. ...+
T Consensus 166 -----------~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~----~~---~~~~--- 224 (272)
T 2nwq_A 166 -----------PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA----RY---DKTY--- 224 (272)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH----HH---HHhh---
Confidence 12346999999999999999866 489999999999998853211000000 00 0000
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....++..+|+|++++++
T Consensus 225 ~~~~~~~pedvA~~v~~l 242 (272)
T 2nwq_A 225 AGAHPIQPEDIAETIFWI 242 (272)
T ss_dssp -CCCCBCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHH
Confidence 011357999999999876
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=182.74 Aligned_cols=196 Identities=18% Similarity=0.248 Sum_probs=134.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh--hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ--KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
||+|+||||||++|++++++|++.|++|++++|+.... ......+... ...+++++.+|++|++++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF--KASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH--HTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH--HhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999953211 1111111111 1247899999999999999999999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
||+++... +.++.+++++|++.+++++||+ |+ ++.. .+|..+.. |...
T Consensus 82 i~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~--------p~~~ 129 (308)
T 1qyc_A 82 ISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND------VDNVHAVE--------PAKS 129 (308)
T ss_dssp EECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC------TTSCCCCT--------THHH
T ss_pred EECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cc---cccC------ccccccCC--------cchh
Confidence 99998632 3456799999999875889984 43 2111 11211111 1124
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
.| .+|..+|.+++. .+++++++||+.++|+......... .....+....+. ++..++++|++|+|++++
T Consensus 130 ~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 200 (308)
T ss_dssp HH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHHH
Confidence 58 999999988865 5899999999999986432211110 000011122222 255789999999999988
Q ss_pred ccC
Q 026091 241 FFT 243 (243)
Q Consensus 241 ~~~ 243 (243)
.++
T Consensus 201 ~~l 203 (308)
T 1qyc_A 201 KAV 203 (308)
T ss_dssp TTS
T ss_pred HHH
Confidence 753
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=177.58 Aligned_cols=203 Identities=16% Similarity=0.107 Sum_probs=147.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEE-eCCchhhchh-hhhhcCCCCCCCeEEEecCCCChh-----------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-RSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPE----------- 70 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~----------- 70 (243)
+.|++|||||+|+||++++++|+++|++|++++ | +....... ..+.. ..+.++.++.+|++|.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSA 121 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCC-------C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh--hcCCeEEEEEeeCCCchhcccccccccc
Confidence 457999999999999999999999999999999 7 54332222 22210 11357899999999999
Q ss_pred ------hHHHHhc-------cccEEEEeeeccCC-----CC--------------CChHHHHHHHHHHHHHHHHHHHHhc
Q 026091 71 ------SFDAAIA-------GCTGVIHVAAPIDI-----HG--------------KEPEEVIIQRAVSGTIGILKSCLKS 118 (243)
Q Consensus 71 ------~~~~~~~-------~~d~vi~~a~~~~~-----~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (243)
++.++++ ++|+|||+||.... .. .+.+...+++|+.++.++++++.+.
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 201 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 201 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888876 68999999997543 11 3445678999999999999887643
Q ss_pred ---CC------ccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccE
Q 026091 119 ---GT------VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDL 186 (243)
Q Consensus 119 ---~~------~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~ 186 (243)
.. .++||++||..++.+. ++...|+.+|.+.+.+.+.++.+. |+++
T Consensus 202 m~~~~~~~~~~~g~IV~isS~~~~~~~----------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrv 259 (328)
T 2qhx_A 202 VAGTPAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRV 259 (328)
T ss_dssp HHHSCGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHhcCCcCCCCCcEEEEECchhhccCC----------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 11 3689999997654322 123469999999999999998774 8999
Q ss_pred EEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 187 ~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
++++||.+.++. .. . ...........+.- ..+..++|+|++++++
T Consensus 260 n~v~PG~v~T~~-~~-~----~~~~~~~~~~~p~~-----~r~~~pedvA~~v~~l 304 (328)
T 2qhx_A 260 NGVGPGLSVLVD-DM-P----PAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFL 304 (328)
T ss_dssp EEEEESSBSCCC-CS-C----HHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHH
T ss_pred EEEecCcccCCc-cc-c----HHHHHHHHhhCCCC-----CCCCCHHHHHHHHHHH
Confidence 999999999986 21 1 11112221111110 0478999999999876
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=182.94 Aligned_cols=189 Identities=17% Similarity=0.155 Sum_probs=132.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|+++|+||||||++|++++++|+++|++|++++|+.......+..+.. .+++++.+|+.|.+++.++++++|+||
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~~l~~a~~~~d~vi 84 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELDEHEKLVELMKKVDVVI 84 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCCCHHHHHHHHcCCCEEE
Confidence 346899999999999999999999999999999944322212222211 378999999999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
|+++... +.++.+++++|++.+++++||+ |+ ++.. .+|..+.. +....
T Consensus 85 ~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~--------p~~~~ 132 (318)
T 2r6j_A 85 SALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE------EDRINALP--------PFEAL 132 (318)
T ss_dssp ECCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC------TTTCCCCH--------HHHHH
T ss_pred ECCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC------cccccCCC--------Ccchh
Confidence 9998632 3457899999998865789884 43 2211 12222111 11235
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH-HhcCccccc--cccCcCceeHHHHHHhhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM-VMGNREEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
| .+|..+|.+++. .+++++++||+.+++.. ...+... ..+....+. ++..++++|++|+|++++
T Consensus 133 y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 199 (318)
T 2r6j_A 133 I-ERKRMIRRAIEE----ANIPYTYVSANCFASYF--------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTI 199 (318)
T ss_dssp H-HHHHHHHHHHHH----TTCCBEEEECCEEHHHH--------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEcceehhhh--------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHH
Confidence 8 999999988764 68999999999887741 1111111 112222222 255789999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 200 ~~ 201 (318)
T 2r6j_A 200 KV 201 (318)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=173.92 Aligned_cols=168 Identities=17% Similarity=0.167 Sum_probs=128.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+.... ...+.. .+.++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGR-HLDTLRVVAQEAQS---LGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---HSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHH---cCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999 5433222 222221 13468899999999998887764
Q ss_pred ---cccEEEEeee--cc-------C---CCCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCC
Q 026091 78 ---GCTGVIHVAA--PI-------D---IHGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 78 ---~~d~vi~~a~--~~-------~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~ 138 (243)
++|++||+|| .. . ....+.+...+++|+.++.++.+++. +.+ .++||++||.+.+...
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-- 156 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-- 156 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC--
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC--
Confidence 3699999994 22 1 13446677889999999887776654 444 5799999997653211
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..
T Consensus 157 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 199 (260)
T 2qq5_A 157 ---------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELL 199 (260)
T ss_dssp ---------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC
T ss_pred ---------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHH
Confidence 2246999999999999999876 489999999999998853
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-25 Score=176.99 Aligned_cols=202 Identities=20% Similarity=0.152 Sum_probs=146.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +.+....... .. +.++.++++|++|.+++.++++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADL-AAEKGKALAD--EL---GNRAEFVSTNVTSEDSVLAAIEAANQLG 102 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHH--Hh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999 5433322221 11 3478999999999999998886
Q ss_pred cccEEEEeee-ccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEEecceeeecCC
Q 026091 78 GCTGVIHVAA-PIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG---------TVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 78 ~~d~vi~~a~-~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~Ss~~~~~~~~ 137 (243)
++|++||+++ .... ...+.+...+++|+.++.++++++.... ...+||++||...+.+.+
T Consensus 103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 182 (281)
T 3ppi_A 103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI 182 (281)
T ss_dssp EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence 5799999944 3221 1123367899999999999998776421 135899999987553321
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+. |++++.++||.+.++...... .......
T Consensus 183 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----~~~~~~~ 236 (281)
T 3ppi_A 183 ----------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG----EEALAKF 236 (281)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC----HHHHHHH
T ss_pred ----------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc----HHHHHHH
Confidence 23569999999999999988774 899999999999887432221 1111111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+.. ..+++++|+|++++++
T Consensus 237 ~~~~~~~-----~~~~~pedvA~~v~~l 259 (281)
T 3ppi_A 237 AANIPFP-----KRLGTPDEFADAAAFL 259 (281)
T ss_dssp HHTCCSS-----SSCBCHHHHHHHHHHH
T ss_pred HhcCCCC-----CCCCCHHHHHHHHHHH
Confidence 1111111 2689999999999876
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=174.53 Aligned_cols=208 Identities=15% Similarity=0.085 Sum_probs=140.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
+|+++||||+|+||++++++|+++|++|++++| +...... ...+... ..+.++.++.+|++|.+++.+++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHEQ-FEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTTT-SCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhh-cCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999999999 5433221 1122111 0134688999999999999888764
Q ss_pred --ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHH----HHhcC--CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 79 --CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKS----CLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 79 --~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
+|+|||+||... .+++...+++|+.++.++.+. +++.+ ..++||++||.+++.+.+
T Consensus 85 g~id~lv~~Ag~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 148 (267)
T 2gdz_A 85 GRLDILVNNAGVNN---EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------------- 148 (267)
T ss_dssp SCCCEEEECCCCCC---SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------------
T ss_pred CCCCEEEECCCCCC---hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC-------------
Confidence 699999999754 255778999999976665554 44432 146899999986543221
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHH--H---HcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc-cc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFA--E---EHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS-ML 224 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~--~---~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 224 (243)
+...|+.+|.+.+.+.+.++ . .+|+++++++||.+.++....... .... .........+. ..
T Consensus 149 ---------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~-~~~~~~~~~~~~~~ 216 (267)
T 2gdz_A 149 ---------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK--EENM-GQYIEYKDHIKDMI 216 (267)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC--HHHH-GGGGGGHHHHHHHH
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc--cccc-chhhhHHHHHHHHh
Confidence 22469999999999998752 2 358999999999998874221100 0000 00000000000 01
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
....+++++|+|++++++
T Consensus 217 ~~~~~~~~~dvA~~v~~l 234 (267)
T 2gdz_A 217 KYYGILDPPLIANGLITL 234 (267)
T ss_dssp HHHCCBCHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHH
Confidence 112578999999999875
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=180.58 Aligned_cols=192 Identities=18% Similarity=0.170 Sum_probs=132.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc------hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP------EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
||+|+||||||+||++++++|++.|++|++++|+.. +....+..+. ..+++++.+|++|.+++.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~-----~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ-----SLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH-----hCCCEEEEeCCCCHHHHHHHHhC
Confidence 578999999999999999999999999999999531 2221222221 13789999999999999999999
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|||+++... +.++.+++++|++.+.+++||+ |+ ++.. .+|..+..
T Consensus 77 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~-------- 124 (307)
T 2gas_A 77 VDIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLD------VDRHDAVE-------- 124 (307)
T ss_dssp CSEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSC------TTSCCCCT--------
T ss_pred CCEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-cc---cccC------cccccCCC--------
Confidence 999999998632 3457899999998865789983 33 2211 11211111
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVA 236 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva 236 (243)
|..+.| .+|..+|.+++. .|++++++||+.++++......... ..........+. ++..++++|++|+|
T Consensus 125 p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva 195 (307)
T 2gas_A 125 PVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVG 195 (307)
T ss_dssp THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHH
T ss_pred cchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHH
Confidence 112468 999999988764 5899999999999986432211100 000011122222 24567999999999
Q ss_pred Hhhhcc
Q 026091 237 RAHIFF 242 (243)
Q Consensus 237 ~a~~~~ 242 (243)
++++.+
T Consensus 196 ~~~~~~ 201 (307)
T 2gas_A 196 TFTIRA 201 (307)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=171.89 Aligned_cols=195 Identities=17% Similarity=0.162 Sum_probs=143.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCC--CChhhHHHHhc---
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADL--NNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~--- 77 (243)
++|+++||||+|+||++++++|+++|++|++++| +...... ...+... ...+..++.+|+ +|.+++.++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGR-TEASLAEVSDQIKSA--GQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT--TSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHhc--CCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 5433322 2222221 124567777777 88888887765
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+||.... ...+.+...+++|+.++.++++++. +.+ .++||++||...+.+.+
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------ 162 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA------ 162 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC------
Confidence 58999999997432 2345677899999999999999874 334 57999999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
+...|+.+|.+.+.+.+.++.+ .+++++.++||.+.++.. ..... ...
T Consensus 163 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------~~~~~-~~~ 214 (247)
T 3i1j_A 163 ----------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------AQAYP-DEN 214 (247)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------HHHST-TSC
T ss_pred ----------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------hhccc-ccC
Confidence 2346999999999999999876 479999999999987621 01111 111
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+...+|+|+++++|
T Consensus 215 ------~~~~~~p~dva~~~~~l 231 (247)
T 3i1j_A 215 ------PLNNPAPEDIMPVYLYL 231 (247)
T ss_dssp ------GGGSCCGGGGTHHHHHH
T ss_pred ------ccCCCCHHHHHHHHHHH
Confidence 11467889999998876
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=170.40 Aligned_cols=205 Identities=18% Similarity=0.210 Sum_probs=152.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
+.|+++||||++.||+++++.|++.|++|++.+|+..+ +....+.. .+.+...+++|++|+++++++++ ++|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAK---DGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHH---TTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHH---hCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 67999999999999999999999999999999995432 12222222 25678999999999999988876 4899
Q ss_pred EEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 82 VIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 82 vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
+|||||.... .+.++|...+++|+.++..+.+++.+ .++-.+||++||.....+.+
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~--------------- 147 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI--------------- 147 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS---------------
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC---------------
Confidence 9999997543 34567889999999999998886443 33246999999976543321
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISM 229 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (243)
....|+.||.....+.+.++.+ +||+++.+.||.|..|........ ....+.+. ...++. .+
T Consensus 148 -------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~--~~~~~~~~-~~~Plg-----R~ 212 (247)
T 4hp8_A 148 -------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD--AARNKAIL-ERIPAG-----RW 212 (247)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHHHHHHH-TTCTTS-----SC
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC--HHHHHHHH-hCCCCC-----CC
Confidence 2246999999999999999877 489999999999988753221111 11111121 223333 78
Q ss_pred eeHHHHHHhhhccC
Q 026091 230 VHIDDVARAHIFFT 243 (243)
Q Consensus 230 i~v~Dva~a~~~~~ 243 (243)
...+|+|.+++||+
T Consensus 213 g~peeiA~~v~fLa 226 (247)
T 4hp8_A 213 GHSEDIAGAAVFLS 226 (247)
T ss_dssp BCTHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHh
Confidence 89999999999874
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-25 Score=173.02 Aligned_cols=183 Identities=18% Similarity=0.185 Sum_probs=139.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+|+++||||+|+||++++++|+++|++|++++|+.. ... ....++.+|++|.+++.++++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-DQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC-TTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc-ccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999999999999433 211 135778899999998888775
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+||.... ...+.+...+++|+.++.++++++.+.- +.++||++||.+++.+.
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------ 137 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------ 137 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC------------
Confidence 68999999996532 1224466789999999999999988753 12589999998754322
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-----CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-----GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
++...|+.+|.+.+.+.+.++.+. |+++++++||.+.++... ..... ..+
T Consensus 138 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~------------~~~~~-~~~-- 192 (236)
T 1ooe_A 138 ----------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR------------KWMPN-ADH-- 192 (236)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH------------HHSTT-CCG--
T ss_pred ----------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh------------hcCCC-ccc--
Confidence 123569999999999999998764 499999999999887311 11011 111
Q ss_pred ccCcCceeHHHHHHhhh
Q 026091 224 LLNISMVHIDDVARAHI 240 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~ 240 (243)
..+++.+|+|++++
T Consensus 193 ---~~~~~~~dvA~~i~ 206 (236)
T 1ooe_A 193 ---SSWTPLSFISEHLL 206 (236)
T ss_dssp ---GGCBCHHHHHHHHH
T ss_pred ---cccCCHHHHHHHHH
Confidence 14677899999886
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=174.39 Aligned_cols=206 Identities=17% Similarity=0.125 Sum_probs=151.9
Q ss_pred CCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCchh-hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 4 EKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPEQ-KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
+.|+++||||+ |+||++++++|+++|++|+++.|+.... ......+... .+.++.++++|++|.++++++++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHHHHHH
Confidence 56899999999 9999999999999999999999855433 2223333211 14578999999999999888876
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+++. +.+ ..+||++||.+.+.....
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~------ 169 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFP------ 169 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSS------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCC------
Confidence 46999999997543 2345567899999999999998873 444 579999999765433210
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcC--ccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG--LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~g--i~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
++...|+.+|.+.+.+.+.++.+.+ ++++.+.||.+.++...... ......+. ...+..
T Consensus 170 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~-~~~~~~ 230 (267)
T 3gdg_A 170 --------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP----KETQQLWH-SMIPMG 230 (267)
T ss_dssp --------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC----HHHHHHHH-TTSTTS
T ss_pred --------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC----HHHHHHHH-hcCCCC
Confidence 1235699999999999999998864 89999999999987543221 11112221 222222
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+++|+|++++++
T Consensus 231 -----r~~~~~dva~~~~~l 245 (267)
T 3gdg_A 231 -----RDGLAKELKGAYVYF 245 (267)
T ss_dssp -----SCEETHHHHHHHHHH
T ss_pred -----CCcCHHHHHhHhhee
Confidence 789999999998876
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=172.15 Aligned_cols=202 Identities=16% Similarity=0.172 Sum_probs=144.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch---hhhh-hcCCCCCCCeEEEecCCCChhhHHHHh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD---LSFL-TNLPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
|..++|+++||||+|+||++++++|+++|++|++++|+....... +... ......+.++.++.+|++|.+++.+++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 556689999999999999999999999999999999954321110 1111 011112457899999999999988887
Q ss_pred c-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCc
Q 026091 77 A-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 77 ~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
+ ++|++||+||.... .+.+.+...+++|+.++.++.+++.+ .+ .++||++||.+.+.+..
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--- 157 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW--- 157 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH---
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC---
Confidence 6 57999999997543 23456778899999999999998765 33 57999999976543310
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCc-eeCCCCCCCCCCcHHHHHHHHhc
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSF-VTGPFICPQLAGSVRGTLAMVMG 216 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~-i~G~~~~~~~~~~~~~~~~~~~~ 216 (243)
.+....|+.+|.+.+.+.+.++.+ +|++++.++||. +-.+... ...+
T Consensus 158 -----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~------------~~~~ 208 (274)
T 3e03_A 158 -----------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN------------MLPG 208 (274)
T ss_dssp -----------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------C
T ss_pred -----------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh------------hccc
Confidence 012346999999999999999877 489999999995 5444210 0111
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+ . ..+...+|+|++++++
T Consensus 209 ~~--~-----~~~~~pedvA~~v~~l 227 (274)
T 3e03_A 209 VD--A-----AACRRPEIMADAAHAV 227 (274)
T ss_dssp CC--G-----GGSBCTHHHHHHHHHH
T ss_pred cc--c-----cccCCHHHHHHHHHHH
Confidence 11 1 1467889999988775
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=172.34 Aligned_cols=203 Identities=13% Similarity=0.083 Sum_probs=136.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH----hcccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA----IAGCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~----~~~~d 80 (243)
||+++||||+|+||++++++|+++|++|++++| +.+.......+... +.++..+ |..+.+.+.+. +.++|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAET---YPQLKPM--SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999999999999 44333222222211 2344444 44443322221 22689
Q ss_pred EEEEeeecc-CC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 81 GVIHVAAPI-DI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 81 ~vi~~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
++||+||.. .. .+.+.+...+++|+.++.++++++.+ .+ .++||++||..++.+.+
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------- 140 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK------------- 140 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT-------------
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC-------------
Confidence 999999975 32 23355678999999999999887753 34 57999999976543221
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcH----HHHHHHHhcCcccccc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSV----RGTLAMVMGNREEYSM 223 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 223 (243)
+...|+.+|.+.+.+.+.++.+. |+++++++||.++|+.......... ......... ..+.
T Consensus 141 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~-~~p~-- 208 (254)
T 1zmt_A 141 ---------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTAL-- 208 (254)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HSSS--
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhc-cCCC--
Confidence 23469999999999999998774 8999999999998886433211000 001111110 1111
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
..+.+++|+|++++++
T Consensus 209 ---~~~~~p~dvA~~v~~l 224 (254)
T 1zmt_A 209 ---QRLGTQKELGELVAFL 224 (254)
T ss_dssp ---SSCBCHHHHHHHHHHH
T ss_pred ---CCCcCHHHHHHHHHHH
Confidence 2578999999998876
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-24 Score=171.71 Aligned_cols=203 Identities=15% Similarity=0.099 Sum_probs=146.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEE-eCCchhhch-hhhhhcCCCCCCCeEEEecCCCChh-----------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV-RSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPE----------- 70 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~----------- 70 (243)
++|+++||||+|+||++++++|+++|++|++++ | +.+.... ...+.. ..+.++.++++|++|.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHHhh--hcCCeeEEEEeecCCccccccccccccc
Confidence 468999999999999999999999999999999 8 5433222 122210 11357899999999999
Q ss_pred ------hHHHHhc-------cccEEEEeeeccCC-----CC--------------CChHHHHHHHHHHHHHHHHHHHHhc
Q 026091 71 ------SFDAAIA-------GCTGVIHVAAPIDI-----HG--------------KEPEEVIIQRAVSGTIGILKSCLKS 118 (243)
Q Consensus 71 ------~~~~~~~-------~~d~vi~~a~~~~~-----~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (243)
++.++++ ++|++||+||.... .. .+.+...+++|+.++.++++++.+.
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8888876 58999999997542 12 3456678999999999999887653
Q ss_pred ---CC------ccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccE
Q 026091 119 ---GT------VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDL 186 (243)
Q Consensus 119 ---~~------~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~ 186 (243)
.. .++||++||...+.+. +....|+.+|.+.+.+.+.++.+ +|+++
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 222 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRV 222 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred HHhcCCCCCCCCcEEEEEechhhcCCC----------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence 11 3689999997654322 12356999999999999999877 48999
Q ss_pred EEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 187 ~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+.++||.+..+. . .. ........... ++. ..+..++|+|++++++
T Consensus 223 n~v~PG~v~T~~-~--~~---~~~~~~~~~~~-p~~----~r~~~pedvA~~v~~l 267 (291)
T 1e7w_A 223 NGVGPGLSVLVD-D--MP---PAVWEGHRSKV-PLY----QRDSSAAEVSDVVIFL 267 (291)
T ss_dssp EEEEESSBCCGG-G--SC---HHHHHHHHTTC-TTT----TSCBCHHHHHHHHHHH
T ss_pred EEEeeCCccCCc-c--CC---HHHHHHHHhhC-CCC----CCCCCHHHHHHHHHHH
Confidence 999999998886 2 21 11112221111 110 0478899999999876
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=174.65 Aligned_cols=197 Identities=19% Similarity=0.169 Sum_probs=125.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh---HHHHh-
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES---FDAAI- 76 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~- 76 (243)
|+.++|+++||||+|+||++++++|++ |+.|++++| +........ . ..++.++.+|+.+.+. +.+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r-~~~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGR-NPEHLAALA---E----IEGVEPIESDIVKEVLEEGGVDKLK 71 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEES-CHHHHHHHH---T----STTEEEEECCHHHHHHTSSSCGGGT
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeC-CHHHHHHHH---h----hcCCcceecccchHHHHHHHHHHHH
Confidence 666788999999999999999999987 999999999 554332222 1 2368999999988743 22222
Q ss_pred --ccccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCC
Q 026091 77 --AGCTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 77 --~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.++|++||+||..... ..+.+...+++|+.++.++.+++.+.- ...+||++||.+++.+.+
T Consensus 72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 141 (245)
T 3e9n_A 72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP---------- 141 (245)
T ss_dssp TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC----------
Confidence 2589999999975431 234466789999999888888765421 016899999987654331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .+....
T Consensus 142 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~---- 196 (245)
T 3e9n_A 142 ------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS---------QGTNFR---- 196 (245)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------C----
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh---------hhcccc----
Confidence 2356999999999999999876 589999999999999853322111 001111
Q ss_pred cCcCceeHHHHHHhhhcc
Q 026091 225 LNISMVHIDDVARAHIFF 242 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~ 242 (243)
...+++++|+|++++++
T Consensus 197 -~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 197 -PEIYIEPKEIANAIRFV 213 (245)
T ss_dssp -CGGGSCHHHHHHHHHHH
T ss_pred -cccCCCHHHHHHHHHHH
Confidence 12588999999999876
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-25 Score=180.43 Aligned_cols=189 Identities=16% Similarity=0.150 Sum_probs=132.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC-c----hhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD-P----EQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
+||+|+||||||+||++++++|++.|++|++++|+. . .....+..+. ..+++++.+|++|.+++.+++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~-----~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR-----SMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh-----cCCcEEEEecCCCHHHHHHHHcC
Confidence 467899999999999999999999999999999953 1 1111111111 23789999999999999999999
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
+|+|||+++... +.++.+++++|++.+++++||+ |+ ++.. .+|..+..
T Consensus 78 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~-------- 125 (321)
T 3c1o_A 78 VDIVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-SD---FGCE------EDRIKPLP-------- 125 (321)
T ss_dssp CSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-SC---CSSC------GGGCCCCH--------
T ss_pred CCEEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-cc---cccC------ccccccCC--------
Confidence 999999998632 4457899999998865789883 32 2111 12222111
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHH----HhcCccccc--cccCcCceeH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAM----VMGNREEYS--MLLNISMVHI 232 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~i~v 232 (243)
+..+.| .+|..+|.+++. .+++++++||+.++++.. ..+... ..+...... ++..++++|+
T Consensus 126 p~~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (321)
T 3c1o_A 126 PFESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFV--------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYE 192 (321)
T ss_dssp HHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHH--------HHHHCCCSSCCTTSCEEEETTSCCEEEEECH
T ss_pred CcchHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccc--------cccccccccccccCceEEecCCCcceeEeeH
Confidence 112459 999999998864 589999999999888521 111110 111222222 2567899999
Q ss_pred HHHHHhhhcc
Q 026091 233 DDVARAHIFF 242 (243)
Q Consensus 233 ~Dva~a~~~~ 242 (243)
+|+|++++.+
T Consensus 193 ~Dva~~~~~~ 202 (321)
T 3c1o_A 193 EDIAKYTIKV 202 (321)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=174.75 Aligned_cols=200 Identities=15% Similarity=0.171 Sum_probs=145.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch---hhh-hhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD---LSF-LTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
++|++|||||+|+||++++++|+++|++|++++|+....... +.. .......+.++.++.+|++|.+++.++++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999999954321110 000 11111224578999999999999988876
Q ss_pred -----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccc
Q 026091 78 -----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|+|||+||.... .+.+.+...+++|+.++.++++++.+. + ..+||++||...+....
T Consensus 124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~------ 196 (346)
T 3kvo_A 124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVW------ 196 (346)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGG------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCC------
Confidence 68999999997543 233556788999999999999988543 4 57999999976543310
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCc-eeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSF-VTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~-i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
.+....|+.+|.+.+.+.+.++.+. |++++.+.||. +..+. ..... ....
T Consensus 197 --------------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~------------~~~~~-~~~~ 249 (346)
T 3kvo_A 197 --------------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA------------MDMLG-GPGI 249 (346)
T ss_dssp --------------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH------------HHHHC-C--C
T ss_pred --------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH------------HHhhc-cccc
Confidence 0123569999999999999998874 89999999996 43321 11111 1112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. .+..++|+|++++++
T Consensus 250 ~~-----r~~~pedvA~~v~~L 266 (346)
T 3kvo_A 250 ES-----QCRKVDIIADAAYSI 266 (346)
T ss_dssp GG-----GCBCTHHHHHHHHHH
T ss_pred cc-----cCCCHHHHHHHHHHH
Confidence 22 577889999998876
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-23 Score=165.18 Aligned_cols=210 Identities=13% Similarity=0.065 Sum_probs=150.9
Q ss_pred CCCCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhc
Q 026091 1 MEEEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIA 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 77 (243)
|.++.|+++||||+| .||++++++|++.|++|++.+| +.+..+.... +.+. .+.++.++++|++|++++.++++
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYR-KERSRKELEKLLEQL--NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHGGG--TCSSCEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc--CCCcEEEEEccCCCHHHHHHHHH
Confidence 345789999999887 8999999999999999999999 4433323222 2222 23478999999999998888875
Q ss_pred -------cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCc
Q 026091 78 -------GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 -------~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+.+.... +-.+||++||.+...+.+
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~--- 155 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ--- 155 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT---
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc---
Confidence 47999999986432 2223455667889999888888776542 135899999976543221
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGN 217 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~ 217 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+....... .....+....
T Consensus 156 -------------------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~- 213 (256)
T 4fs3_A 156 -------------------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG--FNTILKEIKE- 213 (256)
T ss_dssp -------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT--HHHHHHHHHH-
T ss_pred -------------------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC--CHHHHHHHHh-
Confidence 2246999999999999999877 48999999999999875443321 1222222211
Q ss_pred ccccccccCcCceeHHHHHHhhhccC
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..++. .+...+|+|++++||+
T Consensus 214 ~~Pl~-----R~g~peevA~~v~fL~ 234 (256)
T 4fs3_A 214 RAPLK-----RNVDQVEVGKTAAYLL 234 (256)
T ss_dssp HSTTS-----SCCCHHHHHHHHHHHH
T ss_pred cCCCC-----CCcCHHHHHHHHHHHh
Confidence 12333 6889999999998873
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=170.39 Aligned_cols=186 Identities=13% Similarity=0.117 Sum_probs=140.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|+||++++++|+++|++|++++|+.. ... ....++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-EEA------------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC-TTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh-hcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999433 211 135778999999998888875
Q ss_pred ---cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 ---GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+++|+.++.++.+++.+.- +.++||++||.+++.+.+
T Consensus 73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 142 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP---------- 142 (241)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----------
Confidence 68999999996532 1224456788999999999999988752 025899999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++... ..... ..+
T Consensus 143 ------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~------------~~~~~-~~~- 196 (241)
T 1dhr_A 143 ------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR------------KSMPE-ADF- 196 (241)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH------------HHSTT-SCG-
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc------------ccCcc-hhh-
Confidence 2346999999999999999865 3699999999999876211 11011 111
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
..+++.+|+|++++++
T Consensus 197 ----~~~~~~~~vA~~v~~l 212 (241)
T 1dhr_A 197 ----SSWTPLEFLVETFHDW 212 (241)
T ss_dssp ----GGSEEHHHHHHHHHHH
T ss_pred ----ccCCCHHHHHHHHHHH
Confidence 1567889999998765
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=172.62 Aligned_cols=169 Identities=15% Similarity=0.105 Sum_probs=128.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++| +.+..... ..+... ...+++++.+|++|.+++.++++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHh--CCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999 54332222 111111 12368899999999998888876
Q ss_pred --cccEEEEe-eeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHV-AAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~-a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|+|||+ |+.... ...+.+...+++|+.++.++++++.+.. ..++||++||.+++.+.
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 171 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY------------ 171 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC------------
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC------------
Confidence 68999999 564332 1234456789999999999998876541 03699999997654322
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-----CccEEEEccCceeCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-----GLDLVTIIPSFVTGP 197 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----gi~~~~~rp~~i~G~ 197 (243)
++...|+.+|.+.+.+.+.++.+. ++++++++||.+.++
T Consensus 172 ----------~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 172 ----------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred ----------CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 133569999999999999887664 899999999999876
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=175.66 Aligned_cols=171 Identities=20% Similarity=0.188 Sum_probs=130.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh-hcC---CCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL-TNL---PRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
.|+|+||||+|+||++++++|+++|++|+++.| +.........+ ... ...+.++.++.+|++|.+++.+++++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYA-TLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEE-EESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEe-ecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 578999999999999999999999999998888 33222222111 110 11235789999999999999999875
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+|++|||||.... ...+.+...+++|+.++.++++++ ++.+ .++||++||.+.+.+.+
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~--------- 150 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP--------- 150 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT---------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCC---------
Confidence 8999999986432 233557789999999999999985 3445 67999999976543221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
....|+.||.+.+.+.+.++.+ +|+++++++||.|.++..
T Consensus 151 -------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 151 -------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred -------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 2346999999999999999875 599999999999998864
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=174.03 Aligned_cols=209 Identities=14% Similarity=0.064 Sum_probs=146.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH---cCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD---HGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
+.|+++||||+|+||++++++|++ .|++|++++| +.+.... ...+... ..+.++.++.+|++|++++.++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC-CHHHHHHHHHHHHhh-CCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 468999999999999999999999 8999999999 5433222 2222110 013468899999999998888764
Q ss_pred -------ccc--EEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEEEEecceeeec
Q 026091 78 -------GCT--GVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCLKSG-----TVKRVVYTSSASTVHF 135 (243)
Q Consensus 78 -------~~d--~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~Ss~~~~~~ 135 (243)
++| ++||+||.... .+.+.+...+++|+.++.++++++.+.. ..++||++||.+++.+
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 247 99999997432 2335677899999999999999987642 1457999999875432
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc-CccEEEEccCceeCCCCCCCCC-CcHHHHHHH
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH-GLDLVTIIPSFVTGPFICPQLA-GSVRGTLAM 213 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-gi~~~~~rp~~i~G~~~~~~~~-~~~~~~~~~ 213 (243)
. ++...|+.+|.+.+.+.+.++.+. +++++.++||.+..+....... .........
T Consensus 163 ~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 220 (259)
T 1oaa_A 163 Y----------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK 220 (259)
T ss_dssp C----------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred C----------------------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHH
Confidence 2 123569999999999999999886 5999999999997763110000 000000011
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. ...+. ..+.+++|+|++++++
T Consensus 221 ~~-~~~p~-----~~~~~p~dvA~~v~~l 243 (259)
T 1oaa_A 221 LQ-KLKSD-----GALVDCGTSAQKLLGL 243 (259)
T ss_dssp HH-HHHHT-----TCSBCHHHHHHHHHHH
T ss_pred HH-Hhhhc-----CCcCCHHHHHHHHHHH
Confidence 10 00111 2688999999999876
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=167.02 Aligned_cols=201 Identities=17% Similarity=0.174 Sum_probs=144.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|++|||||++.||++++++|++.|++|++.+|+..+.. ....++++|++|+++++++++
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-------------PEELFVEADLTTKEGCAIVAEATRQR 75 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------CTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-------------CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999543211 133478899999998888876
Q ss_pred --cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.++|...+++|+.++.++.+++.+ .+ -.+||++||.+...+.+.
T Consensus 76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~------ 148 (261)
T 4h15_A 76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE------ 148 (261)
T ss_dssp TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT------
T ss_pred cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC------
Confidence 47999999986332 23466788999999999888776554 34 468999999764432210
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC-------CCcHHHHHHHH
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL-------AGSVRGTLAMV 214 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~-------~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+...... ........+..
T Consensus 149 ---------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (261)
T 4h15_A 149 ---------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKII 213 (261)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHH
Confidence 1246999999999999999887 4899999999999886321110 00000000000
Q ss_pred --hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 --MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 --~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.....++. .+...+|+|++++||+
T Consensus 214 ~~~~~~~Plg-----R~g~peevA~~v~fLa 239 (261)
T 4h15_A 214 MDGLGGIPLG-----RPAKPEEVANLIAFLA 239 (261)
T ss_dssp HHHTTCCTTS-----SCBCHHHHHHHHHHHH
T ss_pred HHHhcCCCCC-----CCcCHHHHHHHHHHHh
Confidence 01112233 6889999999998863
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-23 Score=167.51 Aligned_cols=195 Identities=17% Similarity=0.173 Sum_probs=136.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~----- 77 (243)
++|+|+||||+|+||++++++|+++|++|++++|+..........+... .+.+++++.+|++|. +++.++++
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--NHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999433322223333222 234799999999998 77777765
Q ss_pred --cccEEEEeeeccCC-----------------------------------CCCChHHHHHHHHHHHHHHHHHHHHh---
Q 026091 78 --GCTGVIHVAAPIDI-----------------------------------HGKEPEEVIIQRAVSGTIGILKSCLK--- 117 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~--- 117 (243)
++|++||+||.... ...+.+...+++|+.++.++++++.+
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 68999999997531 12344556799999999999888754
Q ss_pred -cCCccEEEEEecceeeecCCCCcc----cccCCCCCchhh-----------------hhhcCCCCchHHhhHHHHHHHH
Q 026091 118 -SGTVKRVVYTSSASTVHFSGKDVD----MLDETFWSDVDY-----------------IRKLDIWGKSYKLSKTLAERAA 175 (243)
Q Consensus 118 -~~~~~~~i~~Ss~~~~~~~~~~~~----~~~e~~~~~~~~-----------------~~~~~~~~~~y~~sK~~~e~~~ 175 (243)
.+ .++||++||...+........ ..++..+..... .....++...|+.||.+.+.+.
T Consensus 169 ~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~ 247 (311)
T 3o26_A 169 LSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247 (311)
T ss_dssp TSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred cCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence 33 579999999876543321100 000000000000 0000123457999999999999
Q ss_pred HHHHHHc-CccEEEEccCceeCCCCCC
Q 026091 176 LEFAEEH-GLDLVTIIPSFVTGPFICP 201 (243)
Q Consensus 176 ~~~~~~~-gi~~~~~rp~~i~G~~~~~ 201 (243)
+.++.+. +++++.++||.|.++....
T Consensus 248 ~~la~e~~~i~v~~v~PG~v~T~~~~~ 274 (311)
T 3o26_A 248 RVLANKIPKFQVNCVCPGLVKTEMNYG 274 (311)
T ss_dssp HHHHHHCTTSEEEEECCCSBCSGGGTT
T ss_pred HHHHhhcCCceEEEecCCceecCCcCC
Confidence 9999886 7999999999999986443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-23 Score=175.28 Aligned_cols=200 Identities=15% Similarity=0.096 Sum_probs=145.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
..|+++||||+|+||++++++|+++|++|++++|+ ............. +++++.+|++|.+++.++++
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~-~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD-GAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECG-GGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCC-ccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999983 3222111111222 56789999999999888875
Q ss_pred -c-ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -G-CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -~-~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
+ +|+|||+||.... .+.+.+...+++|+.++.++.+++.+. + ..+||++||.+.+.+.+
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~--------- 355 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNR--------- 355 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCT---------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCC---------
Confidence 3 8999999997643 344567789999999999999998876 3 56999999987654432
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .. .... ....
T Consensus 356 -------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~---~~~~-~~~~--- 414 (454)
T 3u0b_A 356 -------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA-TR---EVGR-RLNS--- 414 (454)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------C---HHHH-HSBT---
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh-hH---HHHH-hhcc---
Confidence 2346999999999999988866 489999999999998754322110 00 0000 0111
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
...+...+|+|+++.++
T Consensus 415 --l~r~g~pedvA~~v~fL 431 (454)
T 3u0b_A 415 --LFQGGQPVDVAELIAYF 431 (454)
T ss_dssp --TSSCBCHHHHHHHHHHH
T ss_pred --ccCCCCHHHHHHHHHHH
Confidence 12567899999999876
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-23 Score=177.25 Aligned_cols=200 Identities=20% Similarity=0.178 Sum_probs=142.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhccc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFL-TNLPRASERLQIFNADLNNPESFDAAIAGC-- 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-- 79 (243)
..+++|||||+|+||++++++|+++|++ |++++|+.+.. .....+ ..+...+.+++++.+|++|.+++.++++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 3579999999999999999999999985 88999943321 111111 111112457899999999999999999764
Q ss_pred ----cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 ----TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 ----d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|.|||+||.... .+.+.+...++.|+.++.++.+++++.+ .++||++||.+.+.+.+
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~------------- 369 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP------------- 369 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT-------------
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCC-------------
Confidence 999999997543 2344566788899999999999998887 89999999976654432
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCce
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV 230 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (243)
....|+.+|...+.+.+++. ..|+++++++||.+.+++..... .... +. ...+.++
T Consensus 370 ---------g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~------~~~~-------~~-~~g~~~i 425 (486)
T 2fr1_A 370 ---------GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGP------VADR-------FR-RHGVIEM 425 (486)
T ss_dssp ---------TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CT-TTTEECB
T ss_pred ---------CCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchh------HHHH-------HH-hcCCCCC
Confidence 12459999999999888764 56999999999999886311110 0000 00 1123578
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
+.+|+++++..+
T Consensus 426 ~~e~~a~~l~~~ 437 (486)
T 2fr1_A 426 PPETACRALQNA 437 (486)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888888887653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=165.31 Aligned_cols=162 Identities=17% Similarity=0.132 Sum_probs=120.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC--------Cchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS--------DPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|+++||||+|+||++++++|+++|++|++++|. +.... .....+... +. .+.+|+.|.+++.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---~~---~~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GG---KAVANYDSVEAGEK 81 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TC---EEEEECCCGGGHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh---CC---eEEEeCCCHHHHHH
Confidence 46899999999999999999999999999997542 22211 111222211 11 23579999987766
Q ss_pred Hhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCC
Q 026091 75 AIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~ 138 (243)
+++ ++|++||+||.... .+.+.+...+++|+.++.++.+++. +.+ .++||++||.+...+.+
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~- 159 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF- 159 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC-
Confidence 654 58999999997543 2345677899999999999988764 345 57999999976543321
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCce
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFV 194 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i 194 (243)
+...|+.+|.+.+.+.+.++.+ +|+++++++||.+
T Consensus 160 ---------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 160 ---------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred ---------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 2246999999999999999877 4899999999987
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-22 Score=159.13 Aligned_cols=166 Identities=13% Similarity=0.050 Sum_probs=129.4
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++|||| +|+||++++++|+++|++|++++|+.....+... ... +.++.++.+|++|+++++++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRL---PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH--Hhc---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 4589999999 9999999999999999999999994432111111 111 3467899999999999888876
Q ss_pred ------cccEEEEeeeccC-------C---CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCc
Q 026091 78 ------GCTGVIHVAAPID-------I---HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDV 140 (243)
Q Consensus 78 ------~~d~vi~~a~~~~-------~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~ 140 (243)
++|++||+||... . .+.+.+...+++|+.++.++++++.+.- .-++||++||.+.+ +.
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~~---- 155 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-AM---- 155 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-CC----
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-cc----
Confidence 7899999999654 1 2335567789999999999999988753 12589999986531 11
Q ss_pred ccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCC
Q 026091 141 DMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGP 197 (243)
Q Consensus 141 ~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~ 197 (243)
+....|+.+|.+.+.+.+.++.+. |+++++++||.+.++
T Consensus 156 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 122469999999999999988774 899999999999876
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=172.97 Aligned_cols=200 Identities=21% Similarity=0.184 Sum_probs=144.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhcc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFL-TNLPRASERLQIFNADLNNPESFDAAIAG--C 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~ 79 (243)
..+++|||||+|+||++++++|+++|+ .|++++|+..... ....+ ..+...+.+++++.+|++|.+++.+++++ +
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~-~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAP-GAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGST-THHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccH-HHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 357999999999999999999999998 5888899433211 11111 11222345789999999999999999986 9
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
|+|||+||.... ...+.+...++.|+.++.++.+.+... + .++||++||.+.+.+.+
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~~---------------- 399 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGNA---------------- 399 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCCT----------------
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCCC----------------
Confidence 999999997553 233456678899999999999998876 5 78999999986544332
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHH
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHID 233 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 233 (243)
....|+.+|...+.+.+.+. ..|+++++++||.+.+.+ ....... .... ...+.+++.+
T Consensus 400 ------g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tg---m~~~~~~---~~~~--------~~g~~~l~~e 458 (511)
T 2z5l_A 400 ------GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGG---MAAGAGE---ESLS--------RRGLRAMDPD 458 (511)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTT---CCCCHHH---HHHH--------HHTBCCBCHH
T ss_pred ------CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCc---ccccccH---HHHH--------hcCCCCCCHH
Confidence 22459999999999998764 569999999999884322 1111111 1111 0112578888
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+++++..+
T Consensus 459 ~~a~~l~~a 467 (511)
T 2z5l_A 459 AAVDALLGA 467 (511)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-21 Score=155.95 Aligned_cols=212 Identities=13% Similarity=0.071 Sum_probs=139.0
Q ss_pred CCCCCeEEEecCc--hhhHHHHHHHHHHcCCeEEEEEeCCch-------hhchhhhhhcCCCCC--CCeEEEecC-----
Q 026091 2 EEEKGRVCVTGGT--GFIGSWLIMRLLDHGYSVRTTVRSDPE-------QKRDLSFLTNLPRAS--ERLQIFNAD----- 65 (243)
Q Consensus 2 ~~~~k~ilvtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~D----- 65 (243)
..++|+++||||+ |+||++++++|++.|++|++++|+... ....+..+....... .....+.+|
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 3456899999999 999999999999999999999873110 011111121111100 012333333
Q ss_pred ---CC----C--------hhhHHHHhc-------cccEEEEeeeccC----C---CCCChHHHHHHHHHHHHHHHHHHHH
Q 026091 66 ---LN----N--------PESFDAAIA-------GCTGVIHVAAPID----I---HGKEPEEVIIQRAVSGTIGILKSCL 116 (243)
Q Consensus 66 ---~~----d--------~~~~~~~~~-------~~d~vi~~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~~~~ 116 (243)
+. | .++++++++ ++|++||+||... . .+.+.+...+++|+.++.++++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 22 2 445555544 5899999998532 1 2345577899999999999999998
Q ss_pred hcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC-chHHhhHHHHHHHHHHHHHH----cCccEEEEc
Q 026091 117 KSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG-KSYKLSKTLAERAALEFAEE----HGLDLVTII 190 (243)
Q Consensus 117 ~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~~~~~~----~gi~~~~~r 190 (243)
+.- .-++||++||.+.+.+.+ .. ..|+.+|.+.+.+.+.++.+ +|++++.++
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~ 222 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERIIP----------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 222 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCCT----------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHhccCceEEEEeccccccCCC----------------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEe
Confidence 762 025899999976543221 11 35999999999999988765 599999999
Q ss_pred cCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 191 PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 191 p~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
||.+.++..... ............. .++. .+.+++|+|+++++++
T Consensus 223 PG~v~T~~~~~~--~~~~~~~~~~~~~-~p~~-----r~~~pedvA~~v~~l~ 267 (297)
T 1d7o_A 223 AGPLGSRAAKAI--GFIDTMIEYSYNN-APIQ-----KTLTADEVGNAAAFLV 267 (297)
T ss_dssp ECCCBCCCSSCC--SHHHHHHHHHHHH-SSSC-----CCBCHHHHHHHHHHHT
T ss_pred ccccccchhhhc--cccHHHHHHhhcc-CCCC-----CCCCHHHHHHHHHHHh
Confidence 999999864332 1112111111111 1222 5789999999998764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=158.26 Aligned_cols=198 Identities=14% Similarity=0.152 Sum_probs=132.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEE-E--eCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHH-Hhc---
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT-V--RSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDA-AIA--- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~--- 77 (243)
+|+++||||+|+||++++++|+++|++|+++ + | +.+...... ... .+.... |..+.+.+.+ +.+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r-~~~~~~~~~--~~~----~~~~~~--~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA-DAAERQRFE--SEN----PGTIAL--AEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG-SHHHHHHHH--HHS----TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcC-CHHHHHHHH--HHh----CCCccc--CHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999 6 8 543322221 111 122222 4444433332 222
Q ss_pred cccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 GCTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ~~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.+...+++|+.++.++++++.+ .+ .++||++||.+++.+.+
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 142 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLA-------- 142 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT--------
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCC--------
Confidence 58999999996432 12345677899999999999887753 44 57999999976543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC---CCCCCCcHHHHHHHHhcCcc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI---CPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~---~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.. ...... ...........
T Consensus 143 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~ 205 (244)
T 1zmo_A 143 --------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN---PELRERVDRDV 205 (244)
T ss_dssp --------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC---HHHHHHHHHHC
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch---HHHHHHHhcCC
Confidence 2245999999999999999877 489999999999988753 110000 00111111011
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
++. .+...+|+|++++++
T Consensus 206 p~~-----r~~~pe~vA~~v~~l 223 (244)
T 1zmo_A 206 PLG-----RLGRPDEMGALITFL 223 (244)
T ss_dssp TTC-----SCBCHHHHHHHHHHH
T ss_pred CCC-----CCcCHHHHHHHHHHH
Confidence 122 578999999998876
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=167.27 Aligned_cols=169 Identities=22% Similarity=0.215 Sum_probs=132.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhcc----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFL-TNLPRASERLQIFNADLNNPESFDAAIAG---- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---- 78 (243)
++++|||||+|+||++++++|+++|+ .|++++|+... ......+ ..+...+.++.++.+|++|.+++.++++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~-~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGAD-APGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGG-STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCC-hHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 48999999999999999999999998 78888884322 1111111 11222356799999999999999999863
Q ss_pred --ccEEEEeeecc-CC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 79 --CTGVIHVAAPI-DI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 79 --~d~vi~~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
+|+|||+||.. .. .+.+.+...++.|+.++.++.+.+++.+ .++||++||.+.+.+.+
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~------------- 383 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSG------------- 383 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCT-------------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCC-------------
Confidence 79999999976 32 2334567889999999999999999887 88999999987654432
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|...+.+.+++. .+|++++++.||.+.+.+
T Consensus 384 ---------g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 384 ---------GQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSC
T ss_pred ---------CcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCc
Confidence 22459999999999988764 569999999999998764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-22 Score=163.94 Aligned_cols=178 Identities=15% Similarity=0.095 Sum_probs=126.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCc-hhhc-hhhhhhcCCCCCCCeEEEecCCCChhh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDP-EQKR-DLSFLTNLPRASERLQIFNADLNNPES 71 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~-~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~ 71 (243)
|+ +++||+||||+||||++++..|+++|+ +|.++++... .... ....+.. ..+.++ .|+.+.+.
T Consensus 1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-----~~~~~~-~di~~~~~ 73 (327)
T 1y7t_A 1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-----CAFPLL-AGLEATDD 73 (327)
T ss_dssp CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-----TTCTTE-EEEEEESC
T ss_pred CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-----cccccc-CCeEeccC
Confidence 54 345899999999999999999999886 8988887321 1111 1111111 112223 57877778
Q ss_pred HHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccccc-CCCCC
Q 026091 72 FDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLD-ETFWS 149 (243)
Q Consensus 72 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~-e~~~~ 149 (243)
+.+.++++|+|||+||...... .+..+.++.|+.++.++++++++.+ ...++++.|+..... .++. |..+
T Consensus 74 ~~~a~~~~D~Vih~Ag~~~~~~-~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~------~~~~~~~~~- 145 (327)
T 1y7t_A 74 PKVAFKDADYALLVGAAPRKAG-MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN------ALIAYKNAP- 145 (327)
T ss_dssp HHHHTTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH------HHHHHHTCT-
T ss_pred hHHHhCCCCEEEECCCcCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh------HHHHHHHcC-
Confidence 8888999999999999765433 3445899999999999999999984 234778777643100 0111 1110
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
..+|.++|+.+|...|++...+++.+|++.+++||+++||++..
T Consensus 146 -------~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 146 -------GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp -------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred -------CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 01244669999999999999999889999999999999999754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=154.45 Aligned_cols=212 Identities=14% Similarity=0.065 Sum_probs=136.2
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCc-------hhhchhhhhhcCCCCCC---CeEEEecC------
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDP-------EQKRDLSFLTNLPRASE---RLQIFNAD------ 65 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~D------ 65 (243)
++|+++|||| +|+||++++++|++.|++|++++|+.. .....+..+..... +. ...++.+|
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD-GSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTT-SCBCCCSCEEECCTTCSST
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhc-ccccccccccccccccccc
Confidence 4689999999 899999999999999999999987320 01111121211111 11 12344443
Q ss_pred ------CC--------ChhhHHHHhc-------cccEEEEeeeccC----C---CCCChHHHHHHHHHHHHHHHHHHHHh
Q 026091 66 ------LN--------NPESFDAAIA-------GCTGVIHVAAPID----I---HGKEPEEVIIQRAVSGTIGILKSCLK 117 (243)
Q Consensus 66 ------~~--------d~~~~~~~~~-------~~d~vi~~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~~~~~ 117 (243)
++ |.+++.++++ ++|++||+||... . .+.+.+...+++|+.++.++++++.+
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 22 2445555554 5899999998542 1 23455778899999999999999877
Q ss_pred cC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccC
Q 026091 118 SG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPS 192 (243)
Q Consensus 118 ~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~ 192 (243)
.- +-++||++||.+.+.+.+. ....|+.+|.+.+.+.+.++.+ +|++++.++||
T Consensus 167 ~m~~~g~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG 225 (315)
T 2o2s_A 167 IMNEGGSAVTLSYLAAERVVPG---------------------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAG 225 (315)
T ss_dssp TEEEEEEEEEEEEGGGTSCCTT---------------------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HHhcCCEEEEEecccccccCCC---------------------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecc
Confidence 52 0258999999765432210 1125999999999999988765 58999999999
Q ss_pred ceeCCCCCCCC----CCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 193 FVTGPFICPQL----AGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 193 ~i~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+.++...... ............. ..++. .+...+|+|+++++|+
T Consensus 226 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~-----r~~~pedvA~~v~~L~ 274 (315)
T 2o2s_A 226 PLKSRAASAIGKSGEKSFIDYAIDYSYN-NAPLR-----RDLHSDDVGGAALFLL 274 (315)
T ss_dssp CCCCHHHHHTTCSSSSCHHHHHHHHHHH-HSSSC-----CCCCHHHHHHHHHHHT
T ss_pred cccchhhhhccccccchhHHHHHHHHhc-cCCCC-----CCCCHHHHHHHHHHHh
Confidence 99876321110 0111111111111 11222 5789999999998864
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=153.73 Aligned_cols=212 Identities=12% Similarity=0.026 Sum_probs=117.9
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCC----------chhhchhhhh---------hcCCCCC---CCe
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSD----------PEQKRDLSFL---------TNLPRAS---ERL 59 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~~~~~~---------~~~~~~~---~~~ 59 (243)
+.|+++|||| +|+||++++++|++.|++|++++|+. .+.......+ ......+ ...
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD 87 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence 4589999999 89999999999999999999998731 1110100000 0000000 012
Q ss_pred EEEecCC------------CC--------hhhHHHHhc-------cccEEEEeeeccC----C---CCCChHHHHHHHHH
Q 026091 60 QIFNADL------------NN--------PESFDAAIA-------GCTGVIHVAAPID----I---HGKEPEEVIIQRAV 105 (243)
Q Consensus 60 ~~~~~D~------------~d--------~~~~~~~~~-------~~d~vi~~a~~~~----~---~~~~~~~~~~~~n~ 105 (243)
+++.+|+ +| .+++.++++ ++|++|||||... . .+.+.+...+++|+
T Consensus 88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 167 (319)
T 2ptg_A 88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS 167 (319)
T ss_dssp EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence 4444442 22 335555544 5899999998642 1 23455778999999
Q ss_pred HHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC-chHHhhHHHHHHHHHHHHHH--
Q 026091 106 SGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG-KSYKLSKTLAERAALEFAEE-- 181 (243)
Q Consensus 106 ~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~y~~sK~~~e~~~~~~~~~-- 181 (243)
.++.++++++.+.- .-++||++||.+.+.+.+ .. ..|+.+|.+.+.+.+.++.+
T Consensus 168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------------~~~~~Y~asKaal~~l~~~la~el~ 225 (319)
T 2ptg_A 168 YSFVSLLQHFLPLMKEGGSALALSYIASEKVIP----------------------GYGGGMSSAKAALESDCRTLAFEAG 225 (319)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCceEEEEeccccccccC----------------------ccchhhHHHHHHHHHHHHHHHHHhc
Confidence 99999999988762 025899999976543321 11 25999999999999988765
Q ss_pred --cCccEEEEccCceeCCCCCCCCCC----cHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 182 --HGLDLVTIIPSFVTGPFICPQLAG----SVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 182 --~gi~~~~~rp~~i~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+||+++.++||.+.++........ .......... ...++. .+..++|+|+++++|+
T Consensus 226 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~-----r~~~peevA~~v~~L~ 287 (319)
T 2ptg_A 226 RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSE-ANAPLQ-----KELESDDVGRAALFLL 287 (319)
T ss_dssp HHHCCEEEEEEECCCC-------------------------------------CCCHHHHHHHHHHHT
T ss_pred cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHh-ccCCCC-----CCCCHHHHHHHHHHHh
Confidence 589999999999988753221100 0000000000 111122 5788999999998864
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-20 Score=152.12 Aligned_cols=172 Identities=8% Similarity=-0.018 Sum_probs=124.5
Q ss_pred CCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCC--------chhhchhhhhhcC-CCCCCCeEEEecCCCCh--h-
Q 026091 5 KGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSD--------PEQKRDLSFLTNL-PRASERLQIFNADLNNP--E- 70 (243)
Q Consensus 5 ~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~--~- 70 (243)
.|+++||||++ +||++++++|+++|++|++..|+. .+........... ......+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 58999999875 999999999999999999887632 1111111111111 11123478888999877 6
Q ss_pred -----------------hHHHHhc-------cccEEEEeeeccC--C-----CCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 71 -----------------SFDAAIA-------GCTGVIHVAAPID--I-----HGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 71 -----------------~~~~~~~-------~~d~vi~~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
++.++++ .+|++||+||... . .+.+.+...+++|+.++..+.+++.+.-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6666654 4799999998631 1 3445677899999999999999988763
Q ss_pred -CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc-hHHhhHHHHHHHHHHHHHH----cCccEEEEccCc
Q 026091 120 -TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK-SYKLSKTLAERAALEFAEE----HGLDLVTIIPSF 193 (243)
Q Consensus 120 -~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~ 193 (243)
.-.+||++||.+...+.+ ... .|+.||.+.+.+.+.++.+ +|++++.+.||.
T Consensus 162 ~~~g~Iv~isS~~~~~~~~----------------------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~ 219 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKVVP----------------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP 219 (329)
T ss_dssp EEEEEEEEEECGGGTSCCT----------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred hhCCeEEEEeCccccCCCC----------------------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce
Confidence 014899999976543221 122 5999999999999888755 589999999999
Q ss_pred eeCCC
Q 026091 194 VTGPF 198 (243)
Q Consensus 194 i~G~~ 198 (243)
+..+.
T Consensus 220 v~T~~ 224 (329)
T 3lt0_A 220 LKSRA 224 (329)
T ss_dssp CCCHH
T ss_pred eechh
Confidence 98864
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=163.04 Aligned_cols=192 Identities=15% Similarity=0.065 Sum_probs=130.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe---------CCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR---------SDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.++|+++||||+|+||++++++|+++|++|++++| +..........+... +.. +.+|+.|.+++.
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---~~~---~~~D~~d~~~~~ 90 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---GGE---AVADYNSVIDGA 90 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---TCC---EEECCCCGGGHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---CCe---EEEEeCCHHHHH
Confidence 35789999999999999999999999999999887 222111111222211 122 347999998888
Q ss_pred HHhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEEecceeeecCC
Q 026091 74 AAIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSC----LKSGTVKRVVYTSSASTVHFSG 137 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~Ss~~~~~~~~ 137 (243)
++++ ++|++|||||.... .+.+.+...+++|+.++.++.+++ ++.+ ..+||++||.+...+.+
T Consensus 91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~ 169 (613)
T 3oml_A 91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNF 169 (613)
T ss_dssp HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence 8876 47999999997543 234567789999999999999887 4444 57999999987654432
Q ss_pred CCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHH
Q 026091 138 KDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV 214 (243)
Q Consensus 138 ~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+. ||+++.+.||.+ .+.......
T Consensus 170 ----------------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~---------- 216 (613)
T 3oml_A 170 ----------------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP---------- 216 (613)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC----------
T ss_pred ----------------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc----------
Confidence 22469999999999999998774 899999999864 221111100
Q ss_pred hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
... ...+..+|+|.++++|+
T Consensus 217 ----~~~-----~~~~~pedvA~~v~~L~ 236 (613)
T 3oml_A 217 ----DIL-----FNELKPKLIAPVVAYLC 236 (613)
T ss_dssp ----HHH-----HTTCCGGGTHHHHHHTT
T ss_pred ----hhh-----hhcCCHHHHHHHHHHhc
Confidence 001 14457888888887764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=160.59 Aligned_cols=167 Identities=16% Similarity=0.183 Sum_probs=126.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEE-EeCCch-------------hhchhhhhhcCCCCCCCeEEEecCCCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTT-VRSDPE-------------QKRDLSFLTNLPRASERLQIFNADLNN 68 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~d 68 (243)
..+++|||||+|+||.+++++|+++|++ |+++ +|+... .......+.. .+.++.++.+|++|
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~---~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD---LGATATVVTCDLTD 326 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH---HTCEEEEEECCTTS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh---cCCEEEEEECCCCC
Confidence 3579999999999999999999999988 5555 674321 1111122222 24578999999999
Q ss_pred hhhHHHHhcc------ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCC----ccEEEEEecceee
Q 026091 69 PESFDAAIAG------CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGT----VKRVVYTSSASTV 133 (243)
Q Consensus 69 ~~~~~~~~~~------~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~~~ 133 (243)
.+++.+++++ +|.|||+||.... .+.+.+...+++|+.++.++.+.+..... ..+||++||.+.+
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~ 406 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI 406 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence 9999999874 6999999997543 23455678899999999999999887641 4689999998765
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeC
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG 196 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G 196 (243)
.+.+ ....|+.+|...+.+.+++. ..|++++++.||.+-+
T Consensus 407 ~g~~----------------------g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~t 446 (525)
T 3qp9_A 407 WGGA----------------------GQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEG 446 (525)
T ss_dssp TCCT----------------------TCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTT
T ss_pred CCCC----------------------CCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcccc
Confidence 4432 22459999999998876653 4599999999999933
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=160.19 Aligned_cols=204 Identities=15% Similarity=0.103 Sum_probs=139.5
Q ss_pred CCCCeEEEecCchh-hHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 3 EEKGRVCVTGGTGF-IGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFL-TNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
.++|+++||||+|+ ||+++++.|++.|++|+++++++..... ....+ ......+.++.++.+|++|.+++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 35689999999998 9999999999999999998543443221 11222 1112224578999999999998888764
Q ss_pred -----------cccEEEEeeeccCCC------C--CChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEEEEecceee
Q 026091 78 -----------GCTGVIHVAAPIDIH------G--KEPEEVIIQRAVSGTIGILKSCLKSG-----TVKRVVYTSSASTV 133 (243)
Q Consensus 78 -----------~~d~vi~~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~Ss~~~~ 133 (243)
.+|++|||||..... . .+.+...+++|+.++.++++.++... .-.+||++||....
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 489999999975332 2 34567899999999999999874321 02589999997543
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHH-HHHHHHHcC--ccEEEEccCceeC-CCCCCCCCCcHHH
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERA-ALEFAEEHG--LDLVTIIPSFVTG-PFICPQLAGSVRG 209 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~g--i~~~~~rp~~i~G-~~~~~~~~~~~~~ 209 (243)
.+. ...|+.+|.+.+.+ .+.++++.+ |+++.+.||++.| +..... .. ...
T Consensus 833 ~gg------------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~-~~~ 886 (1887)
T 2uv8_A 833 FGG------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI-IAE 886 (1887)
T ss_dssp SSC------------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CT-THH
T ss_pred cCC------------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hh-HHH
Confidence 220 13499999999998 666665543 9999999999994 432110 11 111
Q ss_pred HHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 210 TLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
..... . ..+...+|+|+++++|+
T Consensus 887 ---~~~~~--p------lr~~sPEEVA~avlfLa 909 (1887)
T 2uv8_A 887 ---GIEKM--G------VRTFSQKEMAFNLLGLL 909 (1887)
T ss_dssp ---HHHTT--S------CCCEEHHHHHHHHHGGG
T ss_pred ---HHHhc--C------CCCCCHHHHHHHHHHHh
Confidence 11111 1 13568999999988874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-17 Score=135.46 Aligned_cols=175 Identities=14% Similarity=0.042 Sum_probs=124.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhhch--------hhhhh-cCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRD--------LSFLT-NLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.+|++|||||++.||+++++.|++ .|++|++++|+....... ...+. .....+..+..+.+|++|.+++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 468999999999999999999999 999999999844322111 00001 11112457889999999999888
Q ss_pred HHhc-------cccEEEEeeeccC---------------------------------------CCCCChHHHHHHHHHHH
Q 026091 74 AAIA-------GCTGVIHVAAPID---------------------------------------IHGKEPEEVIIQRAVSG 107 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~~---------------------------------------~~~~~~~~~~~~~n~~~ 107 (243)
++++ ++|++||+||... ..+.+.+...+++|..+
T Consensus 126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~ 205 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE 205 (405)
T ss_dssp HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence 8875 4799999998631 11334566778888877
Q ss_pred HH-HHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH--
Q 026091 108 TI-GILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-- 181 (243)
Q Consensus 108 ~~-~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-- 181 (243)
.. .+++++.... .-.++|.+||.+...+.+. .....|+.+|.+.+.+.+.++.+
T Consensus 206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~--------------------~~~~aY~AaKaal~~ltrsLA~Ela 265 (405)
T 3zu3_A 206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI--------------------YWNGSIGAAKKDLDQKVLAIRESLA 265 (405)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT--------------------TTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC--------------------ccchHHHHHHHHHHHHHHHHHHHhC
Confidence 76 5555544321 0258999999764322210 01145999999999999999877
Q ss_pred -c-CccEEEEccCceeCCC
Q 026091 182 -H-GLDLVTIIPSFVTGPF 198 (243)
Q Consensus 182 -~-gi~~~~~rp~~i~G~~ 198 (243)
+ |++++.+.||.+-.+.
T Consensus 266 ~~~GIRVNaVaPG~i~T~~ 284 (405)
T 3zu3_A 266 AHGGGDARVSVLKAVVSQA 284 (405)
T ss_dssp TTTSCEEEEEECCCCCCHH
T ss_pred cccCeEEEEEEeCCCcCch
Confidence 4 8999999999998874
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=139.99 Aligned_cols=177 Identities=15% Similarity=0.009 Sum_probs=123.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhhchh--------hhh-hcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDL--------SFL-TNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.+|++|||||++.||+++++.|++ .|++|++++|+........ ..+ ......+..+..+.+|++|.++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 468999999999999999999999 9999999999543222110 000 111112457889999999998877
Q ss_pred HHhc--------cccEEEEeeecc-------------C--C------------------------CCCChHHHHHHHHHH
Q 026091 74 AAIA--------GCTGVIHVAAPI-------------D--I------------------------HGKEPEEVIIQRAVS 106 (243)
Q Consensus 74 ~~~~--------~~d~vi~~a~~~-------------~--~------------------------~~~~~~~~~~~~n~~ 106 (243)
++++ ++|++|||||.. . + .+.+.+...+++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 7754 479999999862 0 0 122345566666766
Q ss_pred HHH-HHHHHHHhcC---CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-
Q 026091 107 GTI-GILKSCLKSG---TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE- 181 (243)
Q Consensus 107 ~~~-~l~~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~- 181 (243)
+.. .+++++.... .-.+||++||.+...+.+. .....|+.||.+.+.+.+.++.+
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~--------------------~~~~aY~ASKaAl~~lTrsLA~El 279 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI--------------------YWHGALGKAKVDLDRTAQRLNARL 279 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH--------------------HTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC--------------------ccchHHHHHHHHHHHHHHHHHHHh
Confidence 654 5566554332 0258999999764322110 01145999999999999999877
Q ss_pred --cCccEEEEccCceeCCCCC
Q 026091 182 --HGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 182 --~gi~~~~~rp~~i~G~~~~ 200 (243)
+||+++.+.||.|-.+...
T Consensus 280 a~~GIRVNaVaPG~i~T~~~~ 300 (422)
T 3s8m_A 280 AKHGGGANVAVLKSVVTQASA 300 (422)
T ss_dssp HTTTCEEEEEEECCCCCTTGG
T ss_pred CccCEEEEEEEcCCCcChhhh
Confidence 4899999999999988643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-17 Score=144.80 Aligned_cols=160 Identities=18% Similarity=0.154 Sum_probs=114.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc--------hhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP--------EQKR-DLSFLTNLPRASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 74 (243)
++|+++||||++.||++++++|+++|++|++.+|+.. +..+ ....+... +... ..|+.|.+++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~---g~~~---~~d~~d~~~~~~ 80 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN---GGVA---VADYNNVLDGDK 80 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT---TCEE---EEECCCTTCHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc---CCeE---EEEcCCHHHHHH
Confidence 5689999999999999999999999999999877321 1111 11222211 2222 246666654444
Q ss_pred Hhc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCC
Q 026091 75 AIA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGK 138 (243)
Q Consensus 75 ~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~ 138 (243)
+++ ++|++|||||.... .+.+.+...+++|+.++..+.+++.+ .+ -.+||++||.+...+.+
T Consensus 81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~- 158 (604)
T 2et6_A 81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNF- 158 (604)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC-
Confidence 432 58999999997432 33456788999999999998876654 34 46999999976554331
Q ss_pred CcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccC
Q 026091 139 DVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPS 192 (243)
Q Consensus 139 ~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~ 192 (243)
....|+.+|.+...+.+.++.+ +||+++.+.|+
T Consensus 159 ---------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 159 ---------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 1245999999999999999877 48999999996
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=145.44 Aligned_cols=162 Identities=14% Similarity=0.081 Sum_probs=119.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC-CChhhHH-HH---hcc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL-NNPESFD-AA---IAG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~-~~---~~~ 78 (243)
++|+++||||++.||+++++.|+++|++|++.+|+.... ....+... +.++..+.+|+ .+.+.+. ++ +.+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~--~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK--TVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHH--HHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999888633211 11222221 34567788898 5554332 22 235
Q ss_pred ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 79 CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 79 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
+|++|||||.... .+.+.+...+++|+.++.++.+++.+. + -.+||++||.+...+.+
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~------------ 462 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNF------------ 462 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC------------
Confidence 8999999997542 234567889999999999988876543 3 46999999976543321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSF 193 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~ 193 (243)
....|+.||.+...+.+.++.+ +||+++.+.||.
T Consensus 463 ----------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 463 ----------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA 499 (604)
T ss_dssp ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred ----------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence 1245999999999999999877 489999999983
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-18 Score=159.60 Aligned_cols=170 Identities=18% Similarity=0.124 Sum_probs=122.3
Q ss_pred CCCCeEEEecCchh-hHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhh-cCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 3 EEKGRVCVTGGTGF-IGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLT-NLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
.++|+++||||+|+ ||++++++|++.|++|+++++++...... ...+. .....+.++.++.+|++|.+++.++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 35689999999998 99999999999999999985434432221 12221 111224568899999999998888864
Q ss_pred -----------cccEEEEeeeccCCC------C--CChHHHHHHHHHHHHHHHHHHHHh--cC---CccEEEEEecceee
Q 026091 78 -----------GCTGVIHVAAPIDIH------G--KEPEEVIIQRAVSGTIGILKSCLK--SG---TVKRVVYTSSASTV 133 (243)
Q Consensus 78 -----------~~d~vi~~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~--~~---~~~~~i~~Ss~~~~ 133 (243)
.+|++||+||..... . .+.+...+++|+.++.++++.++. .- .-.+||++||.+..
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 479999999975322 1 245678899999999999988732 21 02589999996543
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHH-HHHHHHHc--CccEEEEccCceeC
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERA-ALEFAEEH--GLDLVTIIPSFVTG 196 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~--gi~~~~~rp~~i~G 196 (243)
.+ ....|+.+|.+.+.+ .+.++++. .|+++.+.||++.|
T Consensus 634 ~G------------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 634 FG------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp SS------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred cC------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 22 013499999999998 44444433 39999999999985
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=157.00 Aligned_cols=202 Identities=14% Similarity=0.067 Sum_probs=137.7
Q ss_pred CCCCeEEEecCchh-hHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 3 EEKGRVCVTGGTGF-IGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFL-TNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
.++|++|||||+|+ ||.+++++|++.|++|++++++...... ....+ ......+.++.++.+|++|.+++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 35689999999999 9999999999999999998653443221 11222 1122224578999999999999888874
Q ss_pred ---------cccEEEEeeeccCCC------C--CChHHHHHHHHHHHHHHHHHHHHh--c----CCccEEEEEecceeee
Q 026091 78 ---------GCTGVIHVAAPIDIH------G--KEPEEVIIQRAVSGTIGILKSCLK--S----GTVKRVVYTSSASTVH 134 (243)
Q Consensus 78 ---------~~d~vi~~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~--~----~~~~~~i~~Ss~~~~~ 134 (243)
.+|+||||||..... . .+.+...+++|+.++.++++.++. . + ..+||++||.++..
T Consensus 730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSPNHGTF 808 (1878)
T ss_dssp HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECSCSSSS
T ss_pred HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcchhhcc
Confidence 479999999975321 1 245678999999999998876332 2 2 35899999976432
Q ss_pred cCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-c--CccEEEEccCcee-CCCCCCCCCCcHHHH
Q 026091 135 FSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-H--GLDLVTIIPSFVT-GPFICPQLAGSVRGT 210 (243)
Q Consensus 135 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~--gi~~~~~rp~~i~-G~~~~~~~~~~~~~~ 210 (243)
+. ...|+.+|.+.+.+.+.+..+ . +++++.+.||++. ++.... ....
T Consensus 809 gg------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~ 859 (1878)
T 2uv9_A 809 GN------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLV 859 (1878)
T ss_dssp SC------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHT
T ss_pred CC------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhh
Confidence 21 124999999999998765433 1 3999999999998 543211 0110
Q ss_pred HHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 211 LAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....... . ..+...+|+|+++++|
T Consensus 860 ~~~~~~~--p------lr~~sPeEVA~avlfL 883 (1878)
T 2uv9_A 860 AEGVEKL--G------VRTFSQQEMAFNLLGL 883 (1878)
T ss_dssp HHHHHTT--T------CCCBCHHHHHHHHHHH
T ss_pred HHHHHhc--C------CCCCCHHHHHHHHHHH
Confidence 1111111 1 1345889999888775
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=149.34 Aligned_cols=169 Identities=22% Similarity=0.273 Sum_probs=129.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHH-HcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc---
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLL-DHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--- 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--- 78 (243)
..++++||||+|.||++++++|+ ++|+ .|++++|+..........+.++...+.++.++.+|++|.++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 7898 588889953221111111122222356799999999999999999864
Q ss_pred ---ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 79 ---CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 79 ---~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
+|.|||+||.... .+.+.+...++.|+.++.++.+++.. . . +||++||.+...+.+
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~-l-~iV~~SS~ag~~g~~------------- 672 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-D-V-ALVLFSSVSGVLGSG------------- 672 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-T-S-EEEEEEETHHHHTCS-------------
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-C-C-EEEEEccHHhcCCCC-------------
Confidence 6999999997653 34466778899999999999998833 3 3 899999987665542
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|...+.+.+++. ..|++++.+.||.+-+++
T Consensus 673 ---------g~~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 673 ---------GQGNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCC
T ss_pred ---------CCHHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcch
Confidence 22459999998888888765 569999999999987653
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-16 Score=131.53 Aligned_cols=175 Identities=11% Similarity=-0.030 Sum_probs=121.4
Q ss_pred CCCeEEEecCchhhHHH--HHHHHHHcCCeEEEEEeCCchhhch--------hhhhhc-CCCCCCCeEEEecCCCChhhH
Q 026091 4 EKGRVCVTGGTGFIGSW--LIMRLLDHGYSVRTTVRSDPEQKRD--------LSFLTN-LPRASERLQIFNADLNNPESF 72 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~D~~d~~~~ 72 (243)
.+|++|||||++.||.+ ++++|++.|++|++++|+....... ...+.. ....+..+..+.+|++|.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 46899999999999999 9999999999999999954322110 111111 111245789999999999988
Q ss_pred HHHhc-------cccEEEEeeecc-------------C--C------------------------CCCChHHHHHHHHHH
Q 026091 73 DAAIA-------GCTGVIHVAAPI-------------D--I------------------------HGKEPEEVIIQRAVS 106 (243)
Q Consensus 73 ~~~~~-------~~d~vi~~a~~~-------------~--~------------------------~~~~~~~~~~~~n~~ 106 (243)
+++++ ++|++||+||.. . + ...+.+...+++|..
T Consensus 139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~ 218 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG 218 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence 88775 479999999863 0 0 123345556666666
Q ss_pred HHH-HHHHHHHhcCC---ccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-
Q 026091 107 GTI-GILKSCLKSGT---VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE- 181 (243)
Q Consensus 107 ~~~-~l~~~~~~~~~---~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~- 181 (243)
+.. .+++++...+. -.++|.+||.+...+.+. .....|+.+|.+.+.+.+.++.+
T Consensus 219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~--------------------~~~~aY~ASKaAL~~ltrsLA~EL 278 (418)
T 4eue_A 219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI--------------------YREGTIGIAKKDLEDKAKLINEKL 278 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT--------------------TTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc--------------------cccHHHHHHHHHHHHHHHHHHHHh
Confidence 555 55555544320 247999998754322210 01145999999999999988765
Q ss_pred ---cCccEEEEccCceeCCC
Q 026091 182 ---HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 182 ---~gi~~~~~rp~~i~G~~ 198 (243)
+|++++++.||.+-.+.
T Consensus 279 a~~~GIrVN~V~PG~v~T~~ 298 (418)
T 4eue_A 279 NRVIGGRAFVSVNKALVTKA 298 (418)
T ss_dssp HHHHSCEEEEEECCCCCCHH
T ss_pred CCccCeEEEEEECCcCcChh
Confidence 58999999999998864
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-13 Score=133.49 Aligned_cols=204 Identities=15% Similarity=0.118 Sum_probs=131.3
Q ss_pred CCCeEEEecCchh-hHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhh-hcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 4 EKGRVCVTGGTGF-IGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFL-TNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
++|+++||||+++ ||+++++.|++.|++|++.+|+..... ..+..+ ......+.++..+.+|++|.++++++++
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 5689999999999 999999999999999999999544311 111212 1122234568889999999998888753
Q ss_pred --------cccEEEEeeec----cCC----------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCcc---EEEEEe
Q 026091 78 --------GCTGVIHVAAP----IDI----------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVK---RVVYTS 128 (243)
Q Consensus 78 --------~~d~vi~~a~~----~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~---~~i~~S 128 (243)
++|++|||||. ... .+...+...+++|+.++..+++.+.+. + .. .++..+
T Consensus 2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~-~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERD-IASRLHVVLPG 2293 (3089)
T ss_dssp SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCCEEEEEEE
T ss_pred hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCceeEEEEEC
Confidence 36999999997 111 112223345888999988887766543 2 11 222222
Q ss_pred cceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH--c--CccEEEEccCceeCCCCCCCCC
Q 026091 129 SASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE--H--GLDLVTIIPSFVTGPFICPQLA 204 (243)
Q Consensus 129 s~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~--gi~~~~~rp~~i~G~~~~~~~~ 204 (243)
|.. . +.. +....|+.||.+.+.+.+.++.+ . +++++.+.||++-+........
T Consensus 2294 ss~-~-g~~---------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~ 2350 (3089)
T 3zen_D 2294 SPN-R-GMF---------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND 2350 (3089)
T ss_dssp CSS-T-TSC---------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT
T ss_pred Ccc-c-ccC---------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch
Confidence 211 0 100 01124999999999999999988 2 6999999999998543211111
Q ss_pred CcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 205 GSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
... ..... .. ......+|+|.++++|+
T Consensus 2351 ~~~----~~~~~--~~------~r~~~PeEIA~avlfLa 2377 (3089)
T 3zen_D 2351 AIV----SAVEE--AG------VTTYTTDEMAAMLLDLC 2377 (3089)
T ss_dssp TTH----HHHGG--GS------CBCEEHHHHHHHHHHTT
T ss_pred hHH----HHHHh--cC------CCCCCHHHHHHHHHHHh
Confidence 111 11111 11 12348899999999874
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.3e-14 Score=141.15 Aligned_cols=170 Identities=17% Similarity=0.124 Sum_probs=119.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
..|+++||||+|.||+++++.|+++|++ |++++|+..........+......+.++..+.+|++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 3578999999999999999999999987 7777884332211111111111124578899999999998888875
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
.+|+|||+||.... .+.+.+...++.|+.++.++.+.++... ...+||++||.+...+.+
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~------------- 2029 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA------------- 2029 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-------------
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-------------
Confidence 47999999997532 3446677889999999999988877652 146999999976543331
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeC
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTG 196 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G 196 (243)
....|+.+|...+.+.+... ..|++...+..+.+-+
T Consensus 2030 ---------g~~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2030 ---------GQANYGFANSAMERICEKRR-HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBCT
T ss_pred ---------CcHHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcCC
Confidence 22459999999999998754 4589988888776644
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-14 Score=116.49 Aligned_cols=179 Identities=15% Similarity=0.048 Sum_probs=118.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCC---chhh-chhhhhhcCCCCCCCeEEEecCCCCh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSD---PEQK-RDLSFLTNLPRASERLQIFNADLNNP 69 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~---~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~ 69 (243)
|+.+++||+||||+|++|++++..|+..|+ +|.+++++. .... .....+.+. ...+ ..|+...
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---~~~~---~~~i~~~ 74 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---AFPL---LAGMTAH 74 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---TCTT---EEEEEEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---cccc---cCcEEEe
Confidence 544467999999999999999999998885 788887731 2211 111122221 0011 2366556
Q ss_pred hhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 70 ESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 70 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
.++.+.++++|+|||+||...... ....+.+..|+..+.++++.+++.+ .-.+||++|.....-.. -.....+..
T Consensus 75 ~~~~~al~~aD~Vi~~ag~~~~~g-~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~--~~~~~~~~~- 150 (329)
T 1b8p_A 75 ADPMTAFKDADVALLVGARPRGPG-MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY--IAMKSAPSL- 150 (329)
T ss_dssp SSHHHHTTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH--HHHHTCTTS-
T ss_pred cCcHHHhCCCCEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH--HHHHHcCCC-
Confidence 778889999999999999755432 3345889999999999999999984 34588888863211000 000000011
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~ 199 (243)
|+...++.++....++...+++..|++...++...++|...
T Consensus 151 ----------p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg 191 (329)
T 1b8p_A 151 ----------PAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS 191 (329)
T ss_dssp ----------CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred ----------CHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence 12234788888888888888888899888888777888653
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.45 E-value=6e-13 Score=92.72 Aligned_cols=95 Identities=23% Similarity=0.253 Sum_probs=75.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.++++|+|+|+ |++|+++++.|.+.| ++|++++| ++.....+. ..++.++.+|+.+.+.+.++++++|+
T Consensus 3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r-~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADH-DLAALAVLN--------RMGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEES-CHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-CHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHcCCCE
Confidence 35679999999 999999999999999 99999999 554332222 23678899999999999999999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i 125 (243)
|||+++.. ....+++.+.+.+ ++++.
T Consensus 73 vi~~~~~~-----------------~~~~~~~~~~~~g-~~~~~ 98 (118)
T 3ic5_A 73 VISAAPFF-----------------LTPIIAKAAKAAG-AHYFD 98 (118)
T ss_dssp EEECSCGG-----------------GHHHHHHHHHHTT-CEEEC
T ss_pred EEECCCch-----------------hhHHHHHHHHHhC-CCEEE
Confidence 99998431 1357888888888 65554
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.3e-11 Score=98.83 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=82.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+++||+|+||+|++|++++..|+++| ++|.++++ ++. ......+.+.. ....+.. +.+..++.++++++|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di-~~~-~~~~~dL~~~~-~~~~v~~----~~~t~d~~~al~gaDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDV-VNA-PGVTADISHMD-TGAVVRG----FLGQQQLEAALTGMDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEES-SSH-HHHHHHHHTSC-SSCEEEE----EESHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeC-CCc-HhHHHHhhccc-ccceEEE----EeCCCCHHHHcCCCCE
Confidence 45699999999999999999999988 78999887 433 21222222210 0111222 2345677888999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|||+|+....... ...+....|+.++.++++.+++.+ .+.+++++|
T Consensus 80 Vi~~ag~~~~~g~-~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S 125 (326)
T 1smk_A 80 IIVPAGVPRKPGM-TRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS 125 (326)
T ss_dssp EEECCCCCCCSSC-CCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred EEEcCCcCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence 9999986543222 223678999999999999999998 777777776
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-09 Score=89.96 Aligned_cols=86 Identities=12% Similarity=-0.033 Sum_probs=64.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHH-HcCCeEEEEEeCCchhhchh--------hhh-hcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLL-DHGYSVRTTVRSDPEQKRDL--------SFL-TNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
.+|++|||||++.+|.+.+.+|+ ..|..|+++.+.++...... ..+ +.....+.....+.+|+.|.+.++
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 46899999999999999999997 57999999998544322111 000 111223567899999999999888
Q ss_pred HHhc-------cccEEEEeeecc
Q 026091 74 AAIA-------GCTGVIHVAAPI 89 (243)
Q Consensus 74 ~~~~-------~~d~vi~~a~~~ 89 (243)
++++ ++|++||++|..
T Consensus 129 ~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHhcCCCCEEEEecccc
Confidence 8876 479999999864
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=4e-10 Score=91.88 Aligned_cols=171 Identities=12% Similarity=0.070 Sum_probs=102.4
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC--eEEEEEe--CCchhhchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVR--SDPEQKRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
||+||||+|++|++++..|+.+|. ++.++++ +..........+.+. +..+..+.+... .+++.+.++++|+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD~ 77 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESDV 77 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCSE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCCE
Confidence 799999999999999999998884 4665655 211011111111111 111112222221 1235677899999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+||...... ....+.++.|+..+.++++++++.+ +++++++|-=+.... ....... .-|+.
T Consensus 78 Vi~~Ag~~~~~g-~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t---~~~~k~~----------~~p~~ 141 (313)
T 1hye_A 78 VIITSGVPRKEG-MSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMT---YKALVDS----------KFERN 141 (313)
T ss_dssp EEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHH---HHHHHHH----------CCCTT
T ss_pred EEECCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHH---HHHHHhh----------CcChh
Confidence 999999755432 3345789999999999999999998 555555552110000 0000000 01233
Q ss_pred chHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 162 KSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 162 ~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
..++. +.....++...+++..|++..-++. .++|..
T Consensus 142 rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 142 QVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH 178 (313)
T ss_dssp SEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred cEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence 45777 6666777777788777877666664 667754
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=8e-10 Score=89.67 Aligned_cols=170 Identities=11% Similarity=0.030 Sum_probs=99.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEe--CCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVR--SDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+||+||||+|++|++++..|+..+. ++.++++ +..........+.+......++++.. + + .+.++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 3799999999999999999998875 5666655 22111111112211100122334333 2 2 345789999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+|+...... ....+.+..|+..+.++++.+++.+ .+.+++++|--+- .. .........+ |+.
T Consensus 74 Vi~~ag~~~~~g-~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv~-~~--~~~~~~~~~~----------p~~ 138 (303)
T 1o6z_A 74 VVITAGIPRQPG-QTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVD-LL--NRHLYEAGDR----------SRE 138 (303)
T ss_dssp EEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHH-HH--HHHHHHHSSS----------CGG
T ss_pred EEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChHH-HH--HHHHHHHcCC----------CHH
Confidence 999999754322 2344789999999999999999998 7777777663110 00 0000000000 122
Q ss_pred chHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 162 KSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 162 ~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
...+. +-...-++...+++..|++..-++ ..++|..
T Consensus 139 rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H 175 (303)
T 1o6z_A 139 QVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH 175 (303)
T ss_dssp GEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred HeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence 23444 443345555566666777666666 7778864
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=93.58 Aligned_cols=80 Identities=19% Similarity=0.183 Sum_probs=63.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+++||||+|++|+++++.|++.|++|+++.| +.+....+ ..+... .+++++.+|++|.+++.++++++|+|
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R-~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~Dvl 192 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVKGAHFV 192 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC-CHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHHhCCEE
Confidence 4689999999999999999999999999999999 54332222 222110 14567889999999999999999999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+++.
T Consensus 193 Vn~ag~ 198 (287)
T 1lu9_A 193 FTAGAI 198 (287)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 999975
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-09 Score=77.52 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=72.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 82 (243)
++++|+|+|+ |.+|+.+++.|.+.|++|++++| ++.....+. . .....+.+|..+.+.+.++ ++++|+|
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~-~~~~~~~~~---~-----~~~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI-NEEKVNAYA---S-----YATHAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEES-CHHHHHTTT---T-----TCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH---H-----hCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 4678999997 99999999999999999999998 553322221 1 1446788999998888776 7789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
|++++. + .+.| ..+.+.+++.+ +++++..++.
T Consensus 75 i~~~~~------~-----~~~~----~~~~~~~~~~~-~~~ii~~~~~ 106 (144)
T 2hmt_A 75 IVAIGA------N-----IQAS----TLTTLLLKELD-IPNIWVKAQN 106 (144)
T ss_dssp EECCCS------C-----HHHH----HHHHHHHHHTT-CSEEEEECCS
T ss_pred EECCCC------c-----hHHH----HHHHHHHHHcC-CCeEEEEeCC
Confidence 988653 1 1122 23566677778 6777766653
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-09 Score=93.01 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=76.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|+|+|+| +|++|+++++.|++.|++|.+++| +.+....+ .. ...++..+.+|+.|.+++.++++++|+|||
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R-~~~~a~~l---a~---~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACR-TLESAKKL---SA---GVQHSTPISLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEES-SHHHHHHT---TT---TCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEEC-CHHHHHHH---HH---hcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence 67999998 899999999999999999999999 55333222 11 112477889999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHH--H-------HHHHHHHHHHHHhcCCcc
Q 026091 85 VAAPIDIHGKEPEEVIIQR--A-------VSGTIGILKSCLKSGTVK 122 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~~~ 122 (243)
+++..... .-....++. | ...+.+++++|++.| ++
T Consensus 75 ~a~~~~~~--~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~ 118 (450)
T 1ff9_A 75 LIPYTFHA--TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT 118 (450)
T ss_dssp CCC--CHH--HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE
T ss_pred CCccccch--HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce
Confidence 99753221 001122222 2 236788999999988 53
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.3e-09 Score=89.31 Aligned_cols=94 Identities=20% Similarity=0.184 Sum_probs=72.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|||+|.|| |++|+.+++.|.+ .++|.+.+| +.+..+.+. .....+..|+.|.+++.++++++|+||
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~-~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDV-NNENLEKVK---------EFATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEES-CHHHHHHHT---------TTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEc-CHHHHHHHh---------ccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence 4568999997 9999999998865 689999998 554433322 256778899999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+++++.. ...++++|.++| .+++=+|
T Consensus 83 ~~~p~~~-----------------~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 83 GALPGFL-----------------GFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp ECCCGGG-----------------HHHHHHHHHHHT--CEEEECC
T ss_pred EecCCcc-----------------cchHHHHHHhcC--cceEeee
Confidence 9876521 236788888888 5766554
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.5e-09 Score=90.30 Aligned_cols=101 Identities=18% Similarity=0.290 Sum_probs=73.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|++|+|+|| |++|+.+++.|++.| .+|.+.+| +.+....+ ..+... ...++..+.+|++|.+++.+++++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r-~~~~~~~la~~l~~~--~~~~~~~~~~D~~d~~~l~~~l~~~~ 76 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASR-TLSKCQEIAQSIKAK--GYGEIDITTVDADSIEELVALINEVK 76 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEES-CHHHHHHHHHHHHHT--TCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEEC-CHHHHHHHHHHhhhh--cCCceEEEEecCCCHHHHHHHHHhhC
Confidence 468999998 999999999999998 38999999 55433222 222111 123688999999999999999987
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+|+|||++++.. ...++++|.+.| .+++-++
T Consensus 77 ~DvVin~ag~~~-----------------~~~v~~a~l~~g--~~vvD~a 107 (405)
T 4ina_A 77 PQIVLNIALPYQ-----------------DLTIMEACLRTG--VPYLDTA 107 (405)
T ss_dssp CSEEEECSCGGG-----------------HHHHHHHHHHHT--CCEEESS
T ss_pred CCEEEECCCccc-----------------ChHHHHHHHHhC--CCEEEec
Confidence 899999987521 135677788888 3444333
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.5e-09 Score=76.01 Aligned_cols=99 Identities=18% Similarity=0.196 Sum_probs=70.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 82 (243)
+|++|+|+|+ |.+|+++++.|.+.|++|+++.+ +++....+. . .++.++.+|.++++.+.++ ++++|+|
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~-~~~~~~~~~---~-----~~~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDK-SKEKIELLE---D-----EGFDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHH---H-----TTCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHHH---H-----CCCcEEECCCCCHHHHHhCCcccCCEE
Confidence 4678999996 99999999999999999999999 654332222 2 2578899999999999887 4678999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|.+.+ ++ +.| ..+...+++.+ ..+++-..+
T Consensus 75 i~~~~-------~~-----~~n----~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 75 LITGS-------DD-----EFN----LKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp EECCS-------CH-----HHH----HHHHHHHHHHC-CCCEEEEES
T ss_pred EEecC-------CH-----HHH----HHHHHHHHHhC-CceEEEEEc
Confidence 87643 11 122 24455666667 566655443
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.78 E-value=4.6e-08 Score=69.69 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=68.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
.++|+|+|+ |++|+.+++.|.+.|++|++++| +++....+. . ..++..+.+|..+.+.+.+. ++++|+||
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~-~~~~~~~~~---~----~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKDICKKAS---A----EIDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH---H----HCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHH---H----hcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 468999995 99999999999999999999999 554332221 1 11567788999998887765 67899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
++... + +.| ..+.+.+++.+ .+++|..+
T Consensus 75 ~~~~~-------~-----~~~----~~~~~~~~~~~-~~~ii~~~ 102 (140)
T 1lss_A 75 AVTGK-------E-----EVN----LMSSLLAKSYG-INKTIARI 102 (140)
T ss_dssp ECCSC-------H-----HHH----HHHHHHHHHTT-CCCEEEEC
T ss_pred EeeCC-------c-----hHH----HHHHHHHHHcC-CCEEEEEe
Confidence 88531 1 112 24455666667 56776543
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.8e-08 Score=71.57 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=59.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
.++|+|+| .|.+|+++++.|.+.|++|+++.|+.++....+.... ..++.++.+|.++++.+.++ ++++|.||
T Consensus 3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 46899999 4999999999999999999999994333222222111 13688999999999999987 88999998
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 77 ~~~ 79 (153)
T 1id1_A 77 ALS 79 (153)
T ss_dssp ECS
T ss_pred Eec
Confidence 764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=5e-08 Score=79.42 Aligned_cols=115 Identities=16% Similarity=0.197 Sum_probs=78.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||.|+||+|++|+.++..|++.| .+|.+++++. .......+.+.. ...+++... ...++.++++++|+||+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~-~~~~l~~~~----~t~d~~~a~~~aDvVvi 74 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE-TRATVKGYL----GPEQLPDCLKGCDVVVI 74 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS-SSCEEEEEE----SGGGHHHHHTTCSEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC-cCceEEEec----CCCCHHHHhCCCCEEEE
Confidence 79999999999999999999888 7899999943 222222222211 011122211 12457778899999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+++.......+ ..+....|+.....+++.+++.++-.+++++|-
T Consensus 75 ~ag~~~~~g~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 75 PAGVPRKPGMT-RDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp CCSCCCCTTCC-GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 99875432222 236789999999999999999873447776654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.72 E-value=4e-08 Score=75.85 Aligned_cols=76 Identities=25% Similarity=0.376 Sum_probs=53.6
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
.+|+|||||| +|.+|.+++++|+++|++|++++| ....... ...++..+ |+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~-~~~~~~~---------~~~~~~~~--~v~ 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITT-KRALKPE---------PHPNLSIR--EIT 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEC-TTSCCCC---------CCTTEEEE--ECC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeC-Ccccccc---------CCCCeEEE--EHh
Confidence 4689999999 999999999999999999999999 4321100 01244444 444
Q ss_pred Chh----hHHHHhccccEEEEeeeccCC
Q 026091 68 NPE----SFDAAIAGCTGVIHVAAPIDI 91 (243)
Q Consensus 68 d~~----~~~~~~~~~d~vi~~a~~~~~ 91 (243)
..+ .+.+.+.++|++||+||....
T Consensus 70 s~~em~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence 443 344445578999999997543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=84.71 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=61.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++++|+|+|| |++|+++++.|++. |++|++++| +.+....+. .. .++..+.+|+.|.+++.++++++|+|
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R-~~~ka~~la---~~----~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACR-TLANAQALA---KP----SGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEES-SHHHHHHHH---GG----GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEEC-CHHHHHHHH---Hh----cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 5689999997 99999999999998 789999999 554332222 11 14677889999999999999999999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
||+++..
T Consensus 93 In~tp~~ 99 (467)
T 2axq_A 93 ISLIPYT 99 (467)
T ss_dssp EECSCGG
T ss_pred EECCchh
Confidence 9998754
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.8e-08 Score=82.60 Aligned_cols=174 Identities=16% Similarity=0.065 Sum_probs=102.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--e-----EEEEEeCCch--hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--S-----VRTTVRSDPE--QKRDLSFLTNLPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
++||+||||+|+||++++..|+..+. + +.++++.... .......+.+.. ..-.. ++.......+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~--~~~~~----~~~~~~~~~~~ 76 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA--LPLLK----DVIATDKEEIA 76 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC--CTTEE----EEEEESCHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh--hcccC----CEEEcCCcHHH
Confidence 56899999999999999999988764 4 7777773211 111122222210 01111 22223455677
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK--RVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
++++|+||++||...... ....+.++.|...+..+++.+++++ .+ +++.+|-..-.-.+ ..-+....
T Consensus 77 ~~daDvVvitAg~prkpG-~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsNPvd~~t~-----~~~~~~~~---- 145 (333)
T 5mdh_A 77 FKDLDVAILVGSMPRRDG-MERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGNPANTNCL-----TASKSAPS---- 145 (333)
T ss_dssp TTTCSEEEECCSCCCCTT-CCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHH-----HHHHTCTT----
T ss_pred hCCCCEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCchHHHHH-----HHHHHcCC----
Confidence 889999999998654321 2334779999999999999999998 43 56666643210000 00000000
Q ss_pred hhhcCCCCchH-HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 154 IRKLDIWGKSY-KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 154 ~~~~~~~~~~y-~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
.|.... +.+....-++-..++++.|++...++-..|+|...+
T Consensus 146 -----~p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd 188 (333)
T 5mdh_A 146 -----IPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS 188 (333)
T ss_dssp -----SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred -----CCcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence 011112 234444455555667777887777776667887544
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5.7e-07 Score=65.45 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=57.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 82 (243)
..++|+|+| +|.+|+.+++.|.+.|++|+++.| ++.....+ .. ..+...+.+|..+.+.+.++ ++++|+|
T Consensus 18 ~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~-~~~~~~~~---~~----~~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDK-NEYAFHRL---NS----EFSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CGGGGGGS---CT----TCCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHH---Hh----cCCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 347899999 599999999999999999999999 55333221 10 12456788999888877766 6789999
Q ss_pred EEeee
Q 026091 83 IHVAA 87 (243)
Q Consensus 83 i~~a~ 87 (243)
|.+.+
T Consensus 89 i~~~~ 93 (155)
T 2g1u_A 89 FAFTN 93 (155)
T ss_dssp EECSS
T ss_pred EEEeC
Confidence 98753
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-07 Score=73.11 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=53.9
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
++|+|||||| ||.+|.+++++|+++|++|+++.|+.. . . . ..++. ..|+.
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~--l---~----~---~~g~~--~~dv~ 72 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS--L---P----T---PPFVK--RVDVM 72 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC--C---C----C---CTTEE--EEECC
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc--c---c----c---CCCCe--EEccC
Confidence 4689999999 699999999999999999999988331 1 0 0 11333 45777
Q ss_pred ChhhHHHH----hccccEEEEeeeccC
Q 026091 68 NPESFDAA----IAGCTGVIHVAAPID 90 (243)
Q Consensus 68 d~~~~~~~----~~~~d~vi~~a~~~~ 90 (243)
+.+++.+. +.++|++||+||...
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence 76555444 346899999999743
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=6.5e-07 Score=73.06 Aligned_cols=177 Identities=14% Similarity=0.133 Sum_probs=104.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhch-hhhhhcC-CCCCCCeEEEecCCCChhhHHHHh
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRD-LSFLTNL-PRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
|+..++||.|+|+ |++|+.++..|++.|. +|.++++ ..+.... ...+.+. +.....++....| .+.+
T Consensus 1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~-~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~ 71 (326)
T 3pqe_A 1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDC 71 (326)
T ss_dssp -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGG
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEec-chHHHHHHHHHHHhccccccCCeEEEeCc-------HHHh
Confidence 6666789999995 9999999999999886 8999998 5432221 1122221 1111244444333 1357
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
+++|+||.+||..... .....+.++.|......+.+.+.+.++-..++.+|-.... +.+-.+.. .
T Consensus 72 ~~aDvVvi~ag~p~kp-G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~---------~t~~~~k~-----~ 136 (326)
T 3pqe_A 72 KDADIVCICAGANQKP-GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDI---------LTYATWKF-----S 136 (326)
T ss_dssp TTCSEEEECCSCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHH---------HHHHHHHH-----H
T ss_pred CCCCEEEEecccCCCC-CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHH---------HHHHHHHh-----c
Confidence 7899999999864332 2345588999999999999999998733355555532110 00000000 0
Q ss_pred cCCCCchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 157 LDIWGKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 157 ~~~~~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
--|+....+. +....-++...+++..|++...++. .|+|......
T Consensus 137 g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~V~GeHG~t~ 182 (326)
T 3pqe_A 137 GLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCA-HIIGEHGDTE 182 (326)
T ss_dssp CCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEBSSSTTC
T ss_pred CCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHcee-eeeecCCCce
Confidence 0011122343 3333445555666677877766665 6888764433
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.56 E-value=5.3e-07 Score=74.00 Aligned_cols=174 Identities=10% Similarity=-0.026 Sum_probs=100.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
+++||.|+||+|++|++++..|+.+| .+|.++++ ..+.. .....+.+......++. -..+..+.++++|
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi-~~~k~~g~a~DL~~~~~~~~~i~-------~t~d~~~al~dAD 78 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP-FAVGLEGVAEEIRHCGFEGLNLT-------FTSDIKEALTDAK 78 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS-CHHHHHHHHHHHHHHCCTTCCCE-------EESCHHHHHTTEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC-CchhHHHHHHhhhhCcCCCCceE-------EcCCHHHHhCCCC
Confidence 35799999999999999999999988 58999988 44322 11222222111111222 1235667788999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccE-EEEEecceeeecCCCCcccccCCCCCchhhhhhcCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR-VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 159 (243)
+||.+||..... .....+.++.|......+.+.+.+.++-.. ++.+|-....-.+ .......+ |
T Consensus 79 vVvitaG~p~kp-G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~----i~~k~sg~----------p 143 (343)
T 3fi9_A 79 YIVSSGGAPRKE-GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGL----VTLIYSGL----------K 143 (343)
T ss_dssp EEEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHH----HHHHHHTC----------C
T ss_pred EEEEccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHH----HHHHHcCC----------C
Confidence 999999864432 233557899999999999999999872232 4555532100000 00000000 1
Q ss_pred CCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 160 WGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
+....+.+....-++-..++++.|++...++-..|+|...+
T Consensus 144 ~~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHgd 184 (343)
T 3fi9_A 144 PSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHGE 184 (343)
T ss_dssp GGGEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSGG
T ss_pred cceEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCCC
Confidence 11112334344445555667777887777765668886543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.9e-07 Score=63.56 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=58.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
.++|+|+| .|.+|+.+++.|.+.|++|+++.+ +++..+.+. . .++..+.+|.++++.+.++ ++++|+||
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~-~~~~~~~~~---~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIET-SRTRVDELR---E-----RGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHH---H-----TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---H-----cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 45899999 599999999999999999999999 664443332 2 2778899999999998876 56889988
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
-+.
T Consensus 77 ~~~ 79 (140)
T 3fwz_A 77 LTI 79 (140)
T ss_dssp ECC
T ss_pred EEC
Confidence 663
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.5e-06 Score=65.00 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=57.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH--hccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA--IAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~ 81 (243)
.++|+|+| .|.+|+.+++.|.+. |++|+++.| +++....+. . .++..+.+|.++.+.+.++ ++++|.
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~-~~~~~~~~~---~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEI-REEAAQQHR---S-----EGRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES-CHHHHHHHH---H-----TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC-CHHHHHHHH---H-----CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 45899999 699999999999999 999999999 654433322 2 2567788999999988887 788999
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
||.+.
T Consensus 109 vi~~~ 113 (183)
T 3c85_A 109 VLLAM 113 (183)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99764
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.2e-06 Score=67.36 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=57.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|+|+|+|+ |.+|+++++.|.+.|++|+++.+ +++....+. . ..+..++.+|.++.+.+.++ ++++|+||-
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~-~~~~~~~l~---~----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINK-DRELCEEFA---K----KLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHH---H----HSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHH---H----HcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 37999995 99999999999999999999999 654332221 1 12578999999999999987 688999986
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 72 ~ 72 (218)
T 3l4b_C 72 L 72 (218)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.33 E-value=9.5e-07 Score=66.85 Aligned_cols=74 Identities=22% Similarity=0.167 Sum_probs=51.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH---hc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA---IA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+... .. +.. . ..|..+.+..+.+ .. +
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~~~~~~---~~---g~~-~--~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SDAKREMLS---RL---GVE-Y--VGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHH---TT---CCS-E--EEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH---Hc---CCC-E--EeeCCcHHHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999998 554332222 21 111 1 2366655433333 32 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||++++
T Consensus 108 ~D~vi~~~g 116 (198)
T 1pqw_A 108 VDVVLNSLA 116 (198)
T ss_dssp EEEEEECCC
T ss_pred CeEEEECCc
Confidence 899999986
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.9e-07 Score=72.59 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=30.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDP 40 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 40 (243)
|..+++||+|+|++|.+|+.+++.+.+. +++++++.++++
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 5544569999999999999999988754 688886665343
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=6.5e-06 Score=67.04 Aligned_cols=113 Identities=11% Similarity=0.141 Sum_probs=70.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
+++||.|+|| |++|.+++..|+..+. +|.++++ +++... ....+.+.......+++.. .+ .+.++++|
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aD 76 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDV-FKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCD 76 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECC-C---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCC
Confidence 4568999997 9999999999999886 8999998 443222 1222222111112333322 12 23478999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEE
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~ 126 (243)
+||.+++...... ....+....|+.....+++.+.+.++-..++.
T Consensus 77 vVii~~g~p~k~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 121 (318)
T 1y6j_A 77 VIVVTAGANRKPG-ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121 (318)
T ss_dssp EEEECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred EEEEcCCCCCCCC-cCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE
Confidence 9999998644321 22347788899999999999998862334444
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-06 Score=69.22 Aligned_cols=174 Identities=13% Similarity=0.119 Sum_probs=90.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
.++||.|+|+ |.+|++++..|+..|. ++.++++ .++... ....+.+.......++....| .+.++++|
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD 78 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence 4579999995 9999999999999886 8999888 443221 112222211111234444332 23577899
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+||.+||..... .....+.++.|..-...+.+.+.+.++-..++.+|-.... +.+-.+.. ..-|+
T Consensus 79 iVvi~ag~~~kp-G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi---------~t~~~~k~-----~g~p~ 143 (326)
T 3vku_A 79 LVVITAGAPQKP-GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDI---------LTYATWKL-----SGFPK 143 (326)
T ss_dssp EEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECSSSHHH---------HHHHHHHH-----HCCCG
T ss_pred EEEECCCCCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHH---------HHHHHHHh-----cCCCH
Confidence 999999864321 1234477889999999999999988733445555432110 00000000 00011
Q ss_pred CchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 161 GKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 161 ~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
....+. +....-++...+++..|++..-++. .|+|.+....
T Consensus 144 ~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~ViGeHGdt~ 185 (326)
T 3vku_A 144 NRVVGSGTSLDTARFRQSIAKMVNVDARSVHA-YIMGEHGDTE 185 (326)
T ss_dssp GGEEECTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEBSSSTTC
T ss_pred HHeeeecccCcHHHHHHHHHHHhCCCHHHCeE-EEEcCCCCee
Confidence 122333 3333345555566667877766665 6888864433
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-05 Score=64.16 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=69.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch-hhhhhcC---CCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD-LSFLTNL---PRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
++||.|+|| |++|+.++..|+..|+ +|.++++ +++.... ...+.+. .....++... .| + +.++++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d------~-~a~~~a 71 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI-VEGVPQGKALDLYEASPIEGFDVRVTGT-NN------Y-ADTANS 71 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-CccHHHHHHHhHHHhHhhcCCCeEEEEC-CC------H-HHHCCC
Confidence 468999997 9999999999999996 8888887 4322211 1112111 0001122211 22 2 457889
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|+||.+++...... ....+....|......+.+.+.+.+ ...++...|
T Consensus 72 D~Vi~a~g~p~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 119 (309)
T 1ur5_A 72 DVIVVTSGAPRKPG-MSREDLIKVNADITRACISQAAPLS-PNAVIIMVN 119 (309)
T ss_dssp SEEEECCCC---------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred CEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence 99999998644311 1122557788888899999999887 555555444
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.6e-06 Score=66.80 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=77.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC-chhhc-hhhhhhcC-C--CCCCCeEEEecCCCChhhHHH
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD-PEQKR-DLSFLTNL-P--RASERLQIFNADLNNPESFDA 74 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~-~~~~~~~~-~--~~~~~~~~~~~D~~d~~~~~~ 74 (243)
|+.++++|.|+|+ |.+|+.++..|+..|+ +|.+++++. ..... ....+.+. + ....++.. ..| . +
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----~ 74 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----A 74 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G----G
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H----H
Confidence 4444579999996 9999999999999999 999999942 22111 11111110 0 01112222 112 2 3
Q ss_pred HhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 75 AIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
.++++|+||-++|...... ....+.+..|......+.+.+.+.++-..++.+|-
T Consensus 75 a~~~aDvVIiaag~p~kpg-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 75 DTADSDVVVITAGIARKPG-MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp GGTTCSEEEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HhCCCCEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 5678999999998654322 33458899999999999999998873335555553
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=8.7e-06 Score=66.66 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=72.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch-hhhhhcC-C--CCCCCeEEEecCCCChhhHHHHhcc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD-LSFLTNL-P--RASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
+++||.|+|| |.+|..++..|+..|+ +|.++++ +++..+. ...+... . ....+++. ..++.+.+++
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~ 78 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV-VKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTG 78 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC-ChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCC
Confidence 4568999997 9999999999999998 9988888 4432222 1111110 0 00112221 1345557889
Q ss_pred ccEEEEeeeccCCCCCC----hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 79 CTGVIHVAAPIDIHGKE----PEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+|+||-+++.......+ ...+....|......+.+.+.+.. ...++...
T Consensus 79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 99999998754332110 123567778888889999888886 44444333
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=4.3e-06 Score=67.83 Aligned_cols=80 Identities=11% Similarity=0.098 Sum_probs=56.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC--chhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD--PEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
..|+++|+|+ |.+|++++..|++.|. +|+++.|+. .+....+ ..+... ........++.+.+.+.+.++++
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~----~~~~~~~~~~~~~~~l~~~l~~a 227 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK----TDCKAQLFDIEDHEQLRKEIAES 227 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----SSCEEEEEETTCHHHHHHHHHTC
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh----cCCceEEeccchHHHHHhhhcCC
Confidence 4689999996 8999999999999998 899999941 3222221 111111 12334445677777888888899
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+|||+...
T Consensus 228 DiIINaTp~ 236 (315)
T 3tnl_A 228 VIFTNATGV 236 (315)
T ss_dssp SEEEECSST
T ss_pred CEEEECccC
Confidence 999998753
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-05 Score=62.79 Aligned_cols=174 Identities=14% Similarity=0.049 Sum_probs=100.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-C--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-G--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+||+|++|++++..|.++ + .++.++++.. ........+...+ ...+.... .. ....+.++++|+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~---~~~~v~~~-~~--~~~~~~~~~aDiv 73 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---TAVKIKGF-SG--EDATPALEGADVV 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC---SSEEEEEE-CS--SCCHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC---CCceEEEe-cC--CCcHHHhCCCCEE
Confidence 37999999999999999998875 5 5788888843 2222222222221 12222111 00 1234567899999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|-+||..... .....+.++.|..-...+.+.+.+.++-..++.+|-....-..- .......... -|+..
T Consensus 74 ii~ag~~rkp-G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~-a~~~~k~sg~---------~p~~r 142 (312)
T 3hhp_A 74 LISAGVARKP-GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAI-AAEVLKKAGV---------YDKNK 142 (312)
T ss_dssp EECCSCSCCT-TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHH-HHHHHHHTTC---------CCTTS
T ss_pred EEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHH-HHHHHHHcCC---------CCcce
Confidence 9999865432 23456899999999999999999887333555555321000000 0000000000 01223
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
..+......-++...+++..|++..-++ +.|+|.+
T Consensus 143 v~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H 177 (312)
T 3hhp_A 143 LFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH 177 (312)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred EEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence 3455533344555566667788777777 7788876
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3.3e-06 Score=64.58 Aligned_cols=71 Identities=23% Similarity=0.326 Sum_probs=48.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+|+|+||+|++|+++++.|++.|++|.+++| +++..+.+.. .... +. ..|+. ..++.++++++|+||++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~------~~--~~~~~-~~~~~~~~~~~D~Vi~~ 71 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEKAEAKAAEYRRI------AG--DASIT-GMKNEDAAEACDIAVLT 71 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHHHHHHHHHHHHH------HS--SCCEE-EEEHHHHHHHCSEEEEC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhccc------cc--cCCCC-hhhHHHHHhcCCEEEEe
Confidence 7999999999999999999999999999999 5443322221 0100 00 02232 24566777889999988
Q ss_pred ee
Q 026091 86 AA 87 (243)
Q Consensus 86 a~ 87 (243)
..
T Consensus 72 ~~ 73 (212)
T 1jay_A 72 IP 73 (212)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.11 E-value=6.5e-06 Score=68.52 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+|+ |.+|+.+++.|...|++|++++| ++...+.... .. +.. +.+|..+.+.+.++++++|+||
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~-~~~~~~~~~~--~~---g~~---~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDV-NHKRLQYLDD--VF---GGR---VITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HT---TTS---EEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHH--hc---Cce---EEEecCCHHHHHHHHhCCCEEE
Confidence 4589999998 99999999999999999999999 5543322221 11 112 4457778888999999999999
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
++++..
T Consensus 235 ~~~g~~ 240 (369)
T 2eez_A 235 GAVLVP 240 (369)
T ss_dssp ECCC--
T ss_pred ECCCCC
Confidence 998753
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.09 E-value=7.1e-06 Score=67.63 Aligned_cols=74 Identities=20% Similarity=0.285 Sum_probs=51.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+. .. +.. ...|+.+.+++.+.++ +
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~-~~~~~~~~~---~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG-GEGKEELFR---SI-----GGE-VFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-STTHHHHHH---HT-----TCC-EEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC-CHHHHHHHH---Hc-----CCc-eEEecCccHhHHHHHHHHhCCC
Confidence 3578999999999999999999999999999998 443333322 22 111 1237665444444432 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||++++
T Consensus 239 ~D~vi~~~g 247 (347)
T 2hcy_A 239 AHGVINVSV 247 (347)
T ss_dssp EEEEEECSS
T ss_pred CCEEEECCC
Confidence 899999986
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=6.2e-06 Score=67.54 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=51.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh----c-c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI----A-G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~-~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.... . +.. ...|.++.+++.+.+ . +
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~~~~~~~---~---g~~---~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEKIAYLKQ---I---GFD---AAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHH---T---TCS---EEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHh---c---CCc---EEEecCCHHHHHHHHHHHhCCC
Confidence 3579999999999999999999999999999998 5543333322 2 111 224666633333333 2 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|++|+++|
T Consensus 215 ~d~vi~~~g 223 (333)
T 1v3u_A 215 YDCYFDNVG 223 (333)
T ss_dssp EEEEEESSC
T ss_pred CeEEEECCC
Confidence 899999987
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.7e-05 Score=63.06 Aligned_cols=177 Identities=15% Similarity=0.064 Sum_probs=102.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-------eEEEEEeCCchhh---chhhhhhcCCCCCCCeEEEecCCCChhhHHHH
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-------SVRTTVRSDPEQK---RDLSFLTNLPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
-||.|+||+|.||++++-.|++... ++.+++. .+... .....+.... .......+..+ ...+.
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di-~~~~~~~~Gva~DL~~~~-~~~~~~~~~~~-----~~~~a 97 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDI-EPALKALAGVEAELEDCA-FPLLDKVVVTA-----DPRVA 97 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHHTT-CTTEEEEEEES-----CHHHH
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECC-CCccccchhhhhhhhhcC-ccCCCcEEEcC-----ChHHH
Confidence 4899999999999999988876532 5777776 33211 1111222211 01112222221 24567
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK-RVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
++++|+||-+||...... ....+.++.|..-...+.+...+..+.. .++.+|-..-.-.+ .......
T Consensus 98 ~~~advVvi~aG~prkpG-mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~----i~~~~~~------- 165 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKAG-MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNAL----ILLKSAQ------- 165 (345)
T ss_dssp TTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHHTT-------
T ss_pred hCCCCEEEECCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHH----HHHHHcc-------
Confidence 899999999998755422 3456889999999999999988764223 44555532100000 0000000
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~ 202 (243)
...++...-+.+....-++-..++++.|++...++-..|+|......
T Consensus 166 -g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~ 212 (345)
T 4h7p_A 166 -GKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSSTQ 212 (345)
T ss_dssp -TCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTTC
T ss_pred -CCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCCeE
Confidence 00012223445555556666677778898888888778888755443
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.07 E-value=3.8e-06 Score=65.32 Aligned_cols=70 Identities=14% Similarity=0.098 Sum_probs=56.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++.| +++.... +. .++.++.+|.+|++.+.++ ++++|.||
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~-~~~~~~~---~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAED-ENVRKKV---LR------SGANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESC-GGGHHHH---HH------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEEC-CHHHHHH---Hh------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 468999995 9999999999999999 998888 5533222 21 2678999999999999888 78999998
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 77 ~~~ 79 (234)
T 2aef_A 77 VDL 79 (234)
T ss_dssp ECC
T ss_pred EcC
Confidence 663
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.1e-05 Score=62.33 Aligned_cols=116 Identities=12% Similarity=0.037 Sum_probs=75.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++||.|+| +|.+|+.++..|+..|. +|.+++++..........+.+.. ........... .|. +.++++|+|
T Consensus 5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~aDvV 77 (321)
T 3p7m_A 5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENSDVV 77 (321)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCSEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCCCEE
Confidence 56899999 59999999999999887 99999984332221222222210 00112222211 122 467889999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|.+++...... ....+.+..|......+++.+.+.++-..++.+|
T Consensus 78 Ii~ag~p~k~G-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 78 IVTAGVPRKPG-MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp EECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEcCCcCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 99998644322 3355788899999999999999987333555554
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.6e-05 Score=61.50 Aligned_cols=114 Identities=16% Similarity=0.184 Sum_probs=73.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhc-hhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKR-DLSFLTN-LPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
++||.|+|| |.+|.+++..|+..| .+|.++++ ++.... ....+.. .+..+..+++.. | + .+.++++|
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aD 76 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL-DTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDAD 76 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECS-CHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCC
Confidence 469999998 999999999999888 48888887 443222 1122211 111112333332 2 2 34578999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
+||.+++...... ....+....|......+.+.+.+.++-..++.+|
T Consensus 77 vVvi~ag~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 77 LVVICAGAAQKPG-ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp EEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEECCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 9999998654322 3344778889999999999998887333455433
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=5e-05 Score=61.96 Aligned_cols=173 Identities=14% Similarity=0.071 Sum_probs=98.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchh-hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQ-KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
.++||.|+|+ |.+|+.++..|+.+|. ++.++++ ..+. ......+.+..........+..+ |.+ .++++|
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aD 89 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDV-IEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSK 89 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeC-ChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCC
Confidence 3579999996 9999999999999886 8999888 4432 22222222211011111222221 222 478899
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+||.+||..... -....+.++.|..-...+.+.+.++++-..++.+|-....-.. .......+ |+
T Consensus 90 iVvi~aG~~~kp-G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~----~~~k~sg~----------p~ 154 (331)
T 4aj2_A 90 LVIITAGARQQE-GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTY----VAWKISGF----------PK 154 (331)
T ss_dssp EEEECCSCCCCT-TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHH----HHHHHHCC----------CG
T ss_pred EEEEccCCCCCC-CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHH----HHHHHhCC----------CH
Confidence 999999865432 2334478999999999999999998733456555532110000 00000000 11
Q ss_pred CchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 161 GKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 161 ~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
....+. +-...-++...+++..|++..-++. .|+|.+..
T Consensus 155 ~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~ViGeHG~ 194 (331)
T 4aj2_A 155 NRVIGSGCNLDSARFRYLMGERLGVHPLSCHG-WVLGEHGD 194 (331)
T ss_dssp GGEEECTTHHHHHHHHHHHHHHHTSCGGGCBC-CEEBCSST
T ss_pred HHEEeeccccHHHHHHHHHHHHhCCCHHHCEE-eEEecCCC
Confidence 112333 3333445555566666777666665 47887544
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=65.65 Aligned_cols=74 Identities=9% Similarity=0.016 Sum_probs=51.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH---HHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD---AAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+. .. . ..|..+.+..+ +... +
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~-~~~~~~~~~~~g------~~-~--~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQKAQSALKAG------AW-Q--VINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHT------CS-E--EEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHcC------CC-E--EEECCCccHHHHHHHHhCCCC
Confidence 3579999999999999999999999999999999 554433333221 11 1 23555544333 3332 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||+++|
T Consensus 210 ~D~vi~~~g 218 (327)
T 1qor_A 210 VRVVYDSVG 218 (327)
T ss_dssp EEEEEECSC
T ss_pred ceEEEECCc
Confidence 899999987
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=6e-05 Score=61.51 Aligned_cols=171 Identities=13% Similarity=0.097 Sum_probs=97.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
+++||.|+|| |.+|.+++..|+..+. ++.++++ ..+.. .....+.+.......+++.. | + .+.++++|
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aD 78 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence 4468999997 9999999999988875 7888888 54322 21222222111112333332 2 2 33478999
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+||.+++...... ....+....|+.....+.+.+.+.++-..++.+|-....-.. ....... -|+
T Consensus 79 vVii~ag~~~k~g-~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~----~~~k~s~----------~p~ 143 (326)
T 2zqz_A 79 LVVITAGAPQKPG-ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTY----ATWKLSG----------FPK 143 (326)
T ss_dssp EEEECCCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHH----HHHHHHC----------CCG
T ss_pred EEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH----HHHHHcC----------CCH
Confidence 9999998644321 234477888999999999999888734455555432110000 0000000 011
Q ss_pred CchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCC
Q 026091 161 GKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 161 ~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~ 199 (243)
....+. +-...-++...+++..|++..-++ ..++|.+.
T Consensus 144 ~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~HG 182 (326)
T 2zqz_A 144 NRVVGSGTSLDTARFRQSIAEMVNVDARSVH-AYIMGEHG 182 (326)
T ss_dssp GGEEECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEEBSSS
T ss_pred HHEEEccccchHHHHHHHHHHHhCCChhheE-EEEecccC
Confidence 122333 333334555556666787766666 78888653
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=4.4e-05 Score=62.17 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=73.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCC-CCCCCeEEE-ecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLP-RASERLQIF-NADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~-~~D~~d~~~~~~~~~~~d~ 81 (243)
++||.|+|| |.+|..++..|+..|+ +|.+++++..........+.+.. ......+.. ..| . +.++++|+
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~aDi 78 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGADV 78 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCCCE
Confidence 569999997 9999999999999998 99999984332211111221110 000112221 122 2 46788999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
||.++|...... ....+.+..|......+++.+.+.++-..++.+|-
T Consensus 79 VIiaag~p~k~G-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 79 VIVTAGVPRKPG-MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp EEECCSCCCC------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEccCcCCCCC-CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 999998643311 22336788899999999999998873345555553
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=98.00 E-value=3.6e-05 Score=62.62 Aligned_cols=171 Identities=12% Similarity=0.110 Sum_probs=94.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+||.|+|| |.+|.+++..|+..+. ++.++++ .++... ....+.+.......+++.. | + .+.++++|+
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 75 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADL 75 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence 368999997 9999999999998875 8988988 443222 1222222111112333332 2 2 344789999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||.+++...... ....+....|+.....+.+.+++.++-..++.+|-....-.. ....... -|+.
T Consensus 76 Vii~ag~~~~~g-~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~----~~~k~s~----------~p~~ 140 (318)
T 1ez4_A 76 VVITAGAPQKPG-ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTY----ATWKFSG----------FPKE 140 (318)
T ss_dssp EEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHH----HHHHHHC----------CCGG
T ss_pred EEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHH----HHHHHcC----------CCHH
Confidence 999998643311 223356788999999999999988734455555432110000 0000000 0111
Q ss_pred chHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 162 KSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 162 ~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
...+. +-...-++...+++..|++..-++ ..++|.+..
T Consensus 141 rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~HG~ 179 (318)
T 1ez4_A 141 RVIGSGTSLDSSRLRVALGKQFNVDPRSVD-AYIMGEHGD 179 (318)
T ss_dssp GEEECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEESSSSS
T ss_pred HEEeccccchHHHHHHHHHHHhCcChhHEE-EEEecccCC
Confidence 22333 333334555556666787766666 788886533
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=65.93 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=52.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+. .. . ..|.++.+ .+.+... +
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~~g------~~-~--~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS-TEEKAETARKLG------CH-H--TINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHT------CS-E--EEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC------CC-E--EEECCCHHHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999 554333333221 11 1 23555543 3334432 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||+++|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 8999999874
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.9e-05 Score=61.63 Aligned_cols=169 Identities=10% Similarity=0.050 Sum_probs=99.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhc-hhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKR-DLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+||.|+|| |.+|.+++..|++.|+ +|.++++ +++..+ ....+.+. +.......+... .| .+.++++|+
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~-~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDi 72 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-ChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCE
Confidence 37999998 9999999999999987 8999999 554322 11111111 001112222211 12 346788999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
||.+++..... .....+....|..-...+.+.+.+.++-..++.+|-....-.. .......+ |+.
T Consensus 73 VViaag~~~kp-G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~----~~~k~~g~----------p~~ 137 (294)
T 1oju_A 73 IVVTAGLARKP-GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTY----IMWKESGK----------PRN 137 (294)
T ss_dssp EEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHH----HHHHHSCC----------CTT
T ss_pred EEECCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHH----HHHHhcCC----------CHH
Confidence 99999865332 2335588999999999999999998733456655532110000 00000000 122
Q ss_pred chHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 162 KSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 162 ~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
...+. +....-++-..++ +.|++... -+.|+|.+..
T Consensus 138 rviG~gt~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg~ 174 (294)
T 1oju_A 138 EVFGMGNQLDSQRLKERLY-NAGARNIR--RAWIIGEHGD 174 (294)
T ss_dssp SEEECSHHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSST
T ss_pred HEeecccccHHHHHHHHHH-HhCCCccC--ceEEEecCCC
Confidence 23444 3444455555666 77887766 6788887644
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.0001 Score=59.93 Aligned_cols=117 Identities=16% Similarity=0.237 Sum_probs=72.9
Q ss_pred CCC-CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhch-hhhhhc-CCCCCCCeEEEecCCCChhhHHHH
Q 026091 1 MEE-EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRD-LSFLTN-LPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 1 m~~-~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
|++ +++||.|+|+ |.+|..++..|+..|. +|.++++ +++.... ...+.+ .+.....+++.. | + .+.
T Consensus 1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di-~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~a 71 (316)
T 1ldn_A 1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDD 71 (316)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGG
T ss_pred CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC-CcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHH
Confidence 655 4569999997 9999999999988774 8999998 4432221 122222 111112334332 1 2 235
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
++++|+||.+++.......+ ..+.+..|......+++.+.+..+-..++..
T Consensus 72 l~~aDvViia~~~~~~~g~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~ 122 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGET-RLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTC-SGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred hCCCCEEEEcCCCCCCCCCC-HHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence 77899999998765432111 2255677888888888888887622234443
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.3e-05 Score=65.90 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=50.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhH----HHHh-cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESF----DAAI-AG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~-~~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+.. .. +.. .. .|..+.+++ .++. .+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~-~~~~~~~~~~--~~---g~~-~~--~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG-SKEKVDLLKT--KF---GFD-DA--FNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHH--TS---CCS-EE--EETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hc---CCc-eE--EecCCHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999998 5543332220 12 111 12 355543333 3322 25
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||+++|
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 899999976
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.5e-05 Score=68.17 Aligned_cols=73 Identities=18% Similarity=0.367 Sum_probs=58.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 82 (243)
+.|+|+|.| .|-+|+++++.|.+.|++|+++.+ +++....+. ... ++..+.||.++++.++++ ++++|.+
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~-d~~~~~~~~--~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDK-DGDRLRELQ--DKY-----DLRVVNGHASHPDVLHEAGAQDADML 72 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEES-CHHHHHHHH--HHS-----SCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH--Hhc-----CcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence 356899999 699999999999999999999999 664433322 112 678999999999999998 5779998
Q ss_pred EEe
Q 026091 83 IHV 85 (243)
Q Consensus 83 i~~ 85 (243)
|-+
T Consensus 73 ia~ 75 (461)
T 4g65_A 73 VAV 75 (461)
T ss_dssp EEC
T ss_pred EEE
Confidence 744
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.90 E-value=2.6e-05 Score=64.21 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=57.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-----C-eEEEEEeCCchhhchhhhhhcCCCCC--CCeEEEecCCCChhhHHHHh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-----Y-SVRTTVRSDPEQKRDLSFLTNLPRAS--ERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~ 76 (243)
|+||+|.||||++|+.+++.|.+++ + +++++.+++.... ..... .+... ..+.+. |+ +. +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-~~~~~--~~~l~~~~~~~~~--~~-~~----~~~ 78 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-TLGEH--HPHLTPLAHRVVE--PT-EA----AVL 78 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-BGGGT--CTTCGGGTTCBCE--EC-CH----HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-chhhh--cccccccceeeec--cC-CH----HHh
Confidence 5699999999999999999999887 3 7777765332111 11100 00000 011111 22 22 234
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
+++|+|+.+++... +..+++.+ +.| .++|-+|+..
T Consensus 79 ~~~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~ 113 (352)
T 2nqt_A 79 GGHDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADF 113 (352)
T ss_dssp TTCSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred cCCCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCc
Confidence 58999998865421 23555666 677 4788888864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.89 E-value=3.4e-05 Score=63.65 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=51.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh---HHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES---FDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+... .. +.. . ..|..+.+. +.+... +
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~---~~---ga~-~--~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG-TEEGQKIVL---QN---GAH-E--VFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH---HT---TCS-E--EEETTSTTHHHHHHHHHCTTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHH---Hc---CCC-E--EEeCCCchHHHHHHHHcCCCC
Confidence 3578999999999999999999999999999998 554433332 22 111 1 235555433 333333 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||+++|.
T Consensus 240 ~D~vi~~~G~ 249 (351)
T 1yb5_A 240 IDIIIEMLAN 249 (351)
T ss_dssp EEEEEESCHH
T ss_pred cEEEEECCCh
Confidence 8999999873
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=2.1e-05 Score=65.10 Aligned_cols=73 Identities=15% Similarity=0.067 Sum_probs=49.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc-ccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA-GCT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~-~~d 80 (243)
++|+|+||+|.+|..+++.+...|+ +|++++| +++..+.+.. .. +.. ...|..+.+ .+.+... ++|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~-~~~~~~~~~~--~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG-THEKCILLTS--EL-----GFD-AAINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHH--TS-----CCS-EEEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC-CHHHHHHHHH--Hc-----CCc-eEEecCchHHHHHHHHhcCCCCC
Confidence 7999999999999999999999999 9999998 5433322221 11 111 123555543 2333332 589
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
++|+++|
T Consensus 233 ~vi~~~G 239 (357)
T 2zb4_A 233 VYFDNVG 239 (357)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999987
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=3.7e-05 Score=63.53 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=52.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+. .. . ..|..+.+ .+.+... +
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~g------~~-~--~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG-SQKKLQMAEKLG------AA-A--GFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT------CS-E--EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHcC------Cc-E--EEecCChHHHHHHHHHhcCCC
Confidence 3578999999999999999999999999999998 554443333221 11 1 23555443 3333333 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|++|+++|.
T Consensus 232 ~d~vi~~~G~ 241 (354)
T 2j8z_A 232 VNLILDCIGG 241 (354)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCc
Confidence 8999999874
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=3.1e-05 Score=65.30 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=59.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi 83 (243)
.++|+|+| .|.+|+.+++.|.+.|++|+++.+ +++....+. . .++..+.+|.++++.+.++ ++++|+||
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~-d~~~v~~~~---~-----~g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDH-DPDHIETLR---K-----FGMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEEC-CHHHHHHHH---H-----TTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---h-----CCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 45799999 599999999999999999999999 665443332 2 2678899999999999988 77899988
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
-+.
T Consensus 74 v~~ 76 (413)
T 3l9w_A 74 NAI 76 (413)
T ss_dssp ECC
T ss_pred ECC
Confidence 664
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00011 Score=59.63 Aligned_cols=116 Identities=9% Similarity=0.070 Sum_probs=71.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
|||.|+|+ |.+|+.++..|+..|. +|.+++++..........+.+.. ...........| + .+.++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence 37999996 9999999999999886 89999984322111111222110 001122332112 2 2467789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|.+||...... ....+.++.|..-...+.+.+.+.++-..++.+|-
T Consensus 74 ii~ag~~~kpG-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 74 IITAGLPRSPG-MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EECCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 99988653311 22347889999999999999998873345555553
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0002 Score=57.94 Aligned_cols=113 Identities=14% Similarity=0.172 Sum_probs=74.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|| |.+|.+++-.|+..+ .++.++++ +++... ....+.+.......+++.. + + .+.++++|+|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V 71 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDL-DRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAV 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 47999997 999999999998887 68999998 443222 1222222110112333332 2 2 2347899999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|.+++...... ....+....|......+.+.+++.++-..++.+|
T Consensus 72 ii~ag~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 72 VLAAGVAQRPG-ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp EECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EECCCCCCCCC-cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 99998654322 2344778889999999999999887334555554
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.7e-05 Score=63.82 Aligned_cols=75 Identities=19% Similarity=0.113 Sum_probs=50.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHH---HHh-cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFD---AAI-AG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~-~~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+ ..+ +.. ...|..+.+..+ ++. ++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG-GAEKCRFLVEEL--------GFD-GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT--------CCS-EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHc--------CCC-EEEECCCHHHHHHHHHhcCCC
Confidence 3579999999999999999999999999999998 55443333 222 111 123444443333 322 25
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||+++|.
T Consensus 219 ~d~vi~~~g~ 228 (336)
T 4b7c_A 219 IDVFFDNVGG 228 (336)
T ss_dssp EEEEEESSCH
T ss_pred ceEEEECCCc
Confidence 8999999863
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00011 Score=59.33 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=88.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|| |.+|..++..|+..|+ +|.++++ ++..... ...+.............. .+. +.++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~-~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDR-DEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVV 71 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-CHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence 37999997 9999999999999998 9999999 4432211 121211100011222221 122 357789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK-RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|.+++...... ....+....|+.....+++.+.+.+ .. .++.+|-....... . .....++.
T Consensus 72 Ii~~~~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~-----~-----------~~~~~~~~ 133 (304)
T 2v6b_A 72 ILTAGANQKPG-ESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTD-----L-----------ATQLAPGQ 133 (304)
T ss_dssp EECC-------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHH-----H-----------HHHHSCSS
T ss_pred EEcCCCCCCCC-CcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHH-----H-----------HHHhCChh
Confidence 99987543211 1223567788888889998888876 44 44443322110000 0 00000122
Q ss_pred chHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 162 KSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 162 ~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
...+. +-....++...+++..|++..-++. .++|.+
T Consensus 134 rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~-~v~G~H 170 (304)
T 2v6b_A 134 PVIGSGTVLDSARFRHLMAQHAGVDGTHAHG-YVLGEH 170 (304)
T ss_dssp CEEECTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEESS
T ss_pred cEEeCCcCchHHHHHHHHHHHhCcCHHHceE-EEecCC
Confidence 22333 3333345555566666776666666 777765
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=62.65 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=48.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..|+++|+|+ |.+|+++++.|++.|++|++..| +.+....+. .+... ..+. ..| .+.+.+ .++|+|
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R-~~~~~~~la~~~~~~----~~~~--~~~---~~~~~~--~~~Div 184 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR-TVSRAEELAKLFAHT----GSIQ--ALS---MDELEG--HEFDLI 184 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHHTGGG----SSEE--ECC---SGGGTT--CCCSEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHhhcc----CCee--Eec---HHHhcc--CCCCEE
Confidence 4689999997 78999999999999999999999 544332222 11110 1221 123 233322 579999
Q ss_pred EEeeeccC
Q 026091 83 IHVAAPID 90 (243)
Q Consensus 83 i~~a~~~~ 90 (243)
|++++...
T Consensus 185 Vn~t~~~~ 192 (271)
T 1nyt_A 185 INATSSGI 192 (271)
T ss_dssp EECCSCGG
T ss_pred EECCCCCC
Confidence 99987543
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=2.9e-05 Score=62.81 Aligned_cols=80 Identities=14% Similarity=0.124 Sum_probs=53.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC--chhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD--PEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
..|+++|+|+ |.+|++++..|.+.|. +|+++.|+. .+....+ ..+... .+......++.+.+.+.+.++++
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~----~~~~v~~~~~~~l~~~~~~l~~~ 221 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN----TDCVVTVTDLADQHAFTEALASA 221 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH----SSCEEEEEETTCHHHHHHHHHHC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc----cCcceEEechHhhhhhHhhccCc
Confidence 4689999995 9999999999999997 899999931 2222221 111111 12233334555554556677789
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+|||+...
T Consensus 222 DiIINaTp~ 230 (312)
T 3t4e_A 222 DILTNGTKV 230 (312)
T ss_dssp SEEEECSST
T ss_pred eEEEECCcC
Confidence 999998754
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.8e-05 Score=63.16 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=52.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+. .. .. .|..+.+ .+.++.+ +
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~~g------a~-~~--~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG-SEDKLRRAKALG------AD-ET--VNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTSTTHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHhcC------CC-EE--EcCCcccHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999 554443333221 11 22 3555543 3444443 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||+++|
T Consensus 236 ~d~vi~~~g 244 (343)
T 2eih_A 236 ADKVVDHTG 244 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 899999987
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00016 Score=56.71 Aligned_cols=79 Identities=20% Similarity=0.163 Sum_probs=52.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCc------------------hhhc-hhhhhhcCCCCCCCeEEEec
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDP------------------EQKR-DLSFLTNLPRASERLQIFNA 64 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~------------------~~~~-~~~~~~~~~~~~~~~~~~~~ 64 (243)
.++|+|+| +|.+|+++++.|+..|. ++++++++.- .+.+ ....+... ...-.++.+..
T Consensus 31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~ 108 (249)
T 1jw9_B 31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI-NPHIAITPVNA 108 (249)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECS
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH-CCCcEEEEEec
Confidence 47899999 69999999999999995 8888888431 1111 11111111 01224556666
Q ss_pred CCCChhhHHHHhccccEEEEee
Q 026091 65 DLNNPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 65 D~~d~~~~~~~~~~~d~vi~~a 86 (243)
+++ .+.+.++++++|+||.+.
T Consensus 109 ~~~-~~~~~~~~~~~DvVi~~~ 129 (249)
T 1jw9_B 109 LLD-DAELAALIAEHDLVLDCT 129 (249)
T ss_dssp CCC-HHHHHHHHHTSSEEEECC
T ss_pred cCC-HhHHHHHHhCCCEEEEeC
Confidence 665 356777888999999773
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00029 Score=57.40 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=92.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch-hhhhhcC---CCCCCCeEEEecCCCChhhHHHH
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD-LSFLTNL---PRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
|+ .++||.|+|| |.+|..++..|+..|+ +|.++++ +++.... ...+... .....++... . ++ +.
T Consensus 1 m~-~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di-~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~------d~-~a 69 (322)
T 1t2d_A 1 MA-PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI-VKNMPHGKALDTSHTNVMAYSNCKVSGS-N------TY-DD 69 (322)
T ss_dssp -C-CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTHHHHHTCCCCEEEE-C------CG-GG
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhhhhhcCCCcEEEEC-C------CH-HH
Confidence 44 3568999997 9999999999999997 8888888 4432221 1111110 0001122211 2 23 45
Q ss_pred hccccEEEEeeeccCCCCCC----hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCch
Q 026091 76 IAGCTGVIHVAAPIDIHGKE----PEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDV 151 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~ 151 (243)
++++|+||-+++........ +..+....|+.....+.+.+.+..+-..++..|-....- .+-
T Consensus 70 l~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~---------t~~----- 135 (322)
T 1t2d_A 70 LAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM---------VQL----- 135 (322)
T ss_dssp GTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH---------HHH-----
T ss_pred hCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH---------HHH-----
Confidence 78999999998754321111 023557778888888888888776223444443221110 000
Q ss_pred hhhhhcC--CCCchHHh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 152 DYIRKLD--IWGKSYKL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 152 ~~~~~~~--~~~~~y~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
..... +|....+. +-...-++...+++..|++..-++. .++|....
T Consensus 136 --~~~~~g~~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~-~v~G~HG~ 184 (322)
T 1t2d_A 136 --LHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA-HIVGAHGN 184 (322)
T ss_dssp --HHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC-CEEBCSST
T ss_pred --HHHhcCCChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEE-EEEcCCCC
Confidence 00000 12222333 3333344555666667776666654 48887543
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.3e-05 Score=61.18 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=47.5
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..+|++|.|+|+||.+|+.+++.|.+.|++|++.+| +++..+.+. .. ++ +..+ ..++++++|+
T Consensus 8 ~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r-~~~~~~~~~---~~-----g~-----~~~~---~~~~~~~aDv 70 (286)
T 3c24_A 8 DVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEI-APEGRDRLQ---GM-----GI-----PLTD---GDGWIDEADV 70 (286)
T ss_dssp SCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECC-SHHHHHHHH---HT-----TC-----CCCC---SSGGGGTCSE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHH---hc-----CC-----CcCC---HHHHhcCCCE
Confidence 334579999998899999999999999999999988 554333322 11 11 1122 2345678899
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
||.+.
T Consensus 71 Vi~av 75 (286)
T 3c24_A 71 VVLAL 75 (286)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98764
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00021 Score=57.27 Aligned_cols=116 Identities=10% Similarity=0.071 Sum_probs=73.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|| |+||++++-.|+.++ .++.+++............+.+. +......+....+ |. +.++++|+|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence 47999995 999999999998877 47888888332222222222221 0011122222221 22 246789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|-+||...... ....+.++.|..-...+.+.+.++++-..++.+|-
T Consensus 74 vitAG~prkpG-mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 74 VVTAGLARKPG-MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EECCCCCCCSS-SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEecCCCCCCC-CchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999755422 34568899999999999999999883334444443
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0001 Score=60.62 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=51.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhc--ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIA--GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~--~~d 80 (243)
..++|+|+||+|.+|..+++.+...|++|+++++ +++..+.+..+. .-..+..+ .+. +.+.++.. ++|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~g-------a~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN-RTAATEFVKSVG-------ADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHT-------CSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcC-------CcEEecCc-hhHHHHHHHHhCCCCce
Confidence 3578999999999999999999999999999999 554443333321 11233333 222 34444443 589
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+|++++|.
T Consensus 230 vvid~~g~ 237 (342)
T 4eye_A 230 MVVDPIGG 237 (342)
T ss_dssp EEEESCC-
T ss_pred EEEECCch
Confidence 99999874
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00013 Score=60.05 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
|+||.|.||||++|+.+++.|.+.. .+++++.+++.. ....... .+... +. ....+.+.+ + ++++|+|+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~--~~~~~-g~--~~~~~~~~~---~-~~~vDvV~ 73 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFV--HPNLR-GR--TNLKFVPPE---K-LEPADILV 73 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGT--CGGGT-TT--CCCBCBCGG---G-CCCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHh--Cchhc-Cc--ccccccchh---H-hcCCCEEE
Confidence 4699999999999999999998776 488777663322 1111110 00000 00 011122322 2 37899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
.+++... +..+...+.+.| .++|-+|+.
T Consensus 74 ~a~g~~~-----------------s~~~a~~~~~aG--~~VId~Sa~ 101 (345)
T 2ozp_A 74 LALPHGV-----------------FAREFDRYSALA--PVLVDLSAD 101 (345)
T ss_dssp ECCCTTH-----------------HHHTHHHHHTTC--SEEEECSST
T ss_pred EcCCcHH-----------------HHHHHHHHHHCC--CEEEEcCcc
Confidence 8865311 234555666778 468888875
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.9e-05 Score=61.84 Aligned_cols=75 Identities=19% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHh-ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAI-AGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~-~~~ 79 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+.. . .. .|..+.+ .+.++. .++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~lGa------~-~~--~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG-STGKCEACERLGA------K-RG--INYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHTC------S-EE--EETTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcCC------C-EE--EeCCchHHHHHHHHHhCCCc
Confidence 3579999999999999999999999999999998 6544444433211 1 22 2444433 333332 268
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+||+++|.
T Consensus 237 Dvvid~~g~ 245 (353)
T 4dup_A 237 DIILDMIGA 245 (353)
T ss_dssp EEEEESCCG
T ss_pred eEEEECCCH
Confidence 999999874
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.71 E-value=3.3e-05 Score=64.01 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=54.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+|+ |.+|+.+++.|...|++|++++| +++..+.+..+.. ..+.. +..+.+.+.+.++++|+||
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr-~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVEL---LYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHcCCCEEE
Confidence 3579999997 99999999999999999999999 6544433332211 11211 1234566777788999999
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
++++..
T Consensus 236 ~~~~~~ 241 (361)
T 1pjc_A 236 GAVLVP 241 (361)
T ss_dssp ECCCCT
T ss_pred ECCCcC
Confidence 998753
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=9.5e-05 Score=60.84 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=52.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~-- 77 (243)
..++|+|+||+|.+|..+++.+... |++|++++| +++..+....+. .. .. .|..+.+ .+.++..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~-~~~~~~~~~~~g------~~-~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-REEAVEAAKRAG------AD-YV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC-CHHHHHHHHHhC------CC-EE--ecCCCccHHHHHHHHhcCC
Confidence 3578999999989999999999998 999999998 554443333221 11 22 2444433 3555553
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|+||+++|.
T Consensus 240 ~~d~vi~~~g~ 250 (347)
T 1jvb_A 240 GVDAVIDLNNS 250 (347)
T ss_dssp CEEEEEESCCC
T ss_pred CceEEEECCCC
Confidence 68999999874
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.70 E-value=2.1e-05 Score=56.28 Aligned_cols=71 Identities=14% Similarity=0.209 Sum_probs=49.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|+|+| +|.+|+.+++.|.+.|++|.+.+| +++....+. ... +... ...+++.++++++|+||.
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r-~~~~~~~~a--~~~-----~~~~-----~~~~~~~~~~~~~Divi~ 86 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGR-NIDHVRAFA--EKY-----EYEY-----VLINDIDSLIKNNDVIIT 86 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEES-CHHHHHHHH--HHH-----TCEE-----EECSCHHHHHHTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC-CHHHHHHHH--HHh-----CCce-----EeecCHHHHhcCCCEEEE
Confidence 57999999 599999999999999999888888 554332221 111 1222 123456677889999998
Q ss_pred eeecc
Q 026091 85 VAAPI 89 (243)
Q Consensus 85 ~a~~~ 89 (243)
+.+..
T Consensus 87 at~~~ 91 (144)
T 3oj0_A 87 ATSSK 91 (144)
T ss_dssp CSCCS
T ss_pred eCCCC
Confidence 87643
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.0001 Score=60.27 Aligned_cols=75 Identities=11% Similarity=0.021 Sum_probs=51.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|+++++ +++..+....+. .-..+ |..+. +.+.++.. +
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~g-------a~~~~--~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS-TDEKLKIAKEYG-------AEYLI--NASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT-------CSEEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CcEEE--eCCCchHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999 554443333221 11222 33333 34444443 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+|++++|.
T Consensus 218 ~D~vid~~g~ 227 (334)
T 3qwb_A 218 VDASFDSVGK 227 (334)
T ss_dssp EEEEEECCGG
T ss_pred ceEEEECCCh
Confidence 8999999874
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=8.8e-05 Score=60.46 Aligned_cols=75 Identities=16% Similarity=0.130 Sum_probs=52.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|+++++ +++..+.+..+. .-.. .|..+. +.+.+... +
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~G-------a~~~--~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS-SPEKAAHAKALG-------AWET--IDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHT-------CSEE--EETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CCEE--EeCCCccHHHHHHHHhCCCC
Confidence 3579999999999999999999989999999998 654444443321 1122 244443 34444443 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||+++|.
T Consensus 210 ~Dvvid~~g~ 219 (325)
T 3jyn_A 210 CPVVYDGVGQ 219 (325)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCh
Confidence 8999999874
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00018 Score=59.98 Aligned_cols=69 Identities=12% Similarity=0.222 Sum_probs=54.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+|+|+|+| .|.+|+.+++++.+.|++|++++. .+.... .. . .-+++..|..|.+.+.++++++|+|.
T Consensus 11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~-~~~~p~--~~---~-----ad~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDP-SEDCPC--RY---V-----AHEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CTTCTT--GG---G-----SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-CCCChh--hh---h-----CCEEEECCCCCHHHHHHHHHhCCcce
Confidence 467999999 699999999999999999999987 332111 10 0 22567799999999999999999874
Q ss_pred E
Q 026091 84 H 84 (243)
Q Consensus 84 ~ 84 (243)
.
T Consensus 79 ~ 79 (377)
T 3orq_A 79 Y 79 (377)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=56.26 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+++|.|+| +|.+|+.+++.|.+.|++|.+.+| +++....+ .. .+++.. ++.++++++|+||.
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r-~~~~~~~~---~~-----~g~~~~--------~~~~~~~~~DvVi~ 89 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSR-NPKRTARL---FP-----SAAQVT--------FQEEAVSSPEVIFV 89 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEES-SHHHHHHH---SB-----TTSEEE--------EHHHHTTSCSEEEE
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH---HH-----cCCcee--------cHHHHHhCCCEEEE
Confidence 46899999 899999999999999999999999 55332222 11 133321 45667788999997
Q ss_pred eee
Q 026091 85 VAA 87 (243)
Q Consensus 85 ~a~ 87 (243)
+..
T Consensus 90 av~ 92 (215)
T 2vns_A 90 AVF 92 (215)
T ss_dssp CSC
T ss_pred CCC
Confidence 754
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00035 Score=56.83 Aligned_cols=115 Identities=17% Similarity=0.092 Sum_probs=73.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhh-chhhhhhcCCCCCCCeEEE-ecCCCChhhHHHHhcccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQK-RDLSFLTNLPRASERLQIF-NADLNNPESFDAAIAGCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d 80 (243)
.+||.|+|+ |.+|+.++..|+..|. +|.++++ ..+.. .....+.+........... ..|+. + ++++|
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~------~-~~daD 91 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDV-MEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS------V-SAGSK 91 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECS-CHHHHHHHHHHHHHHGGGSCCSEEEEESSSC------S-CSSCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-CHHHHHHHHHHhhhhhhcccCCeEEEcCCHH------H-hCCCC
Confidence 468999997 9999999999999886 8999988 44322 1122222110001111222 23432 2 67899
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+||-+||...... ....+.+..|..-...+.+.+.+.++-..++.+|-
T Consensus 92 iVIitaG~p~kpG-~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 92 LVVITAGARQQEG-ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp EEEECCSCCCCSS-CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEEeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 9999998654321 22336788899889999999888873345555553
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.66 E-value=8.6e-05 Score=59.34 Aligned_cols=77 Identities=21% Similarity=0.364 Sum_probs=51.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..|+++|+|+ |.+|++++..|.+.|. +|+++.| +.+....+ ..+... ...+.....+ .+++.+.++++|+
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R-~~~~a~~la~~~~~~---~~~~~i~~~~---~~~l~~~l~~~Di 197 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL-DTSRAQALADVINNA---VGREAVVGVD---ARGIEDVIAAADG 197 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SHHHHHHHHHHHHHH---HTSCCEEEEC---STTHHHHHHHSSE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHHHhh---cCCceEEEcC---HHHHHHHHhcCCE
Confidence 4689999996 9999999999999997 7999999 55433322 222211 0112222233 3456677788999
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
|||+...
T Consensus 198 VInaTp~ 204 (283)
T 3jyo_A 198 VVNATPM 204 (283)
T ss_dssp EEECSST
T ss_pred EEECCCC
Confidence 9998743
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=4e-05 Score=55.76 Aligned_cols=72 Identities=22% Similarity=0.268 Sum_probs=50.7
Q ss_pred chhhHHHHHHHHHHcCCeEEEEEeCCchhhch---hhhhhcCCCCCCCeEEEecCCCCh--hhHHHHhc------cccEE
Q 026091 14 TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD---LSFLTNLPRASERLQIFNADLNNP--ESFDAAIA------GCTGV 82 (243)
Q Consensus 14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~------~~d~v 82 (243)
+|.++.+.++.|++.|++|++..|+....... ...+.. .+.+...+.+|++++ +++.++++ +-|++
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~---~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ---AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH---TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH---cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 46889999999999999998887743322110 111222 234577888999998 88877764 22999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|||||.
T Consensus 102 VnnAgg 107 (157)
T 3gxh_A 102 VHCLAN 107 (157)
T ss_dssp EECSBS
T ss_pred EECCCC
Confidence 999985
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00055 Score=55.51 Aligned_cols=112 Identities=15% Similarity=0.180 Sum_probs=68.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
+++||.|+|| |.+|..++..|++.|+ +|.+++| ++..... ...+............... .+. +.++++|
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~-~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD 77 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDAD 77 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCC
Confidence 4568999996 9999999999999998 9999999 5432221 1111110000112222211 122 2457899
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i 125 (243)
+||-+++...... ....+....|......+++..++.+ ...+|
T Consensus 78 ~Vii~v~~~~~~g-~~r~~~~~~n~~~~~~~~~~i~~~~-~~~~v 120 (319)
T 1lld_A 78 MVVITAGPRQKPG-QSRLELVGATVNILKAIMPNLVKVA-PNAIY 120 (319)
T ss_dssp EEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred EEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC-CCceE
Confidence 9999887543322 2344778888888888888877765 33343
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.65 E-value=7.5e-05 Score=60.19 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|+|+||+|.+|..+++.+...|++|++++| +++..+.+.. . +... ..|..+.+++.+.++++|+||+
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~---~-----ga~~-~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEKLALPLA---L-----GAEE-AATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGGSHHHHH---T-----TCSE-EEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHh---c-----CCCE-EEECCcchhHHHHhcCceEEEE
Confidence 578999999999999999999999999999999 5543333322 2 1111 1344441334444478999999
Q ss_pred eeec
Q 026091 85 VAAP 88 (243)
Q Consensus 85 ~a~~ 88 (243)
+|.
T Consensus 196 -~g~ 198 (302)
T 1iz0_A 196 -VRG 198 (302)
T ss_dssp -CSC
T ss_pred -CCH
Confidence 764
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.64 E-value=4.2e-05 Score=61.63 Aligned_cols=75 Identities=17% Similarity=0.130 Sum_probs=51.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..++++|+|+ |.+|++++..|++.|. +|++..| +.+....+.. ... .... ++.+.+++.+.++++|+|
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR-~~~ka~~la~--~~~---~~~~----~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANR-TVEKAERLVR--EGD---ERRS----AYFSLAEAETRLAEYDII 208 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECS-SHHHHHHHHH--HSC---SSSC----CEECHHHHHHTGGGCSEE
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHH--Hhh---hccC----ceeeHHHHHhhhccCCEE
Confidence 4679999995 8899999999999997 9999999 5543322221 110 0000 122335677778899999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|++.+..
T Consensus 209 In~t~~~ 215 (297)
T 2egg_A 209 INTTSVG 215 (297)
T ss_dssp EECSCTT
T ss_pred EECCCCC
Confidence 9998653
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00072 Score=54.73 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=70.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeCCchhhchhh-hhhcC-CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRSDPEQKRDLS-FLTNL-PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+||.|+|+ |.+|..++..|++. |++|.+++++ ++..+... .+... +.......+... +| ..+ ++++|+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~-~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~~-l~~aDv 72 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVV-EGIPQGKALDMYESGPVGLFDTKVTGS--ND---YAD-TANSDI 72 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-SSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GGG-GTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-hhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HHH-HCCCCE
Confidence 37999997 99999999999885 7999999994 43222211 11110 000011111110 22 223 678999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
||-+++...... ....+....|+.....+.+.+.+.++-..++.+|
T Consensus 73 Viiav~~p~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 73 VIITAGLPRKPG-MTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp EEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 999887533211 2244778889999999999888876334555553
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00012 Score=62.51 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=49.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeE-EE-----ecCCCChhhHHHHhccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ-IF-----NADLNNPESFDAAIAGC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~D~~d~~~~~~~~~~~ 79 (243)
++|.|+| +|++|..++..|++.|++|++++| +++..+.+.. ...+....++. .+ .+.+.-..++.++++++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~-~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDT-DRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEEC-CHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 5899999 799999999999999999999999 6544333322 11100000100 00 11121123456677889
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+||-+...
T Consensus 80 DvViiaVpt 88 (450)
T 3gg2_A 80 DIIFIAVGT 88 (450)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEcCC
Confidence 999877654
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.62 E-value=6.5e-05 Score=62.11 Aligned_cols=82 Identities=22% Similarity=0.264 Sum_probs=48.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|+.++++|.|+| +|.+|.+++..|++.|++|.+.+| +++..+.+......+...+++. +...+.-..++.++++++|
T Consensus 25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r-~~~~~~~i~~~~~~~~~l~g~~-l~~~i~~t~d~~ea~~~aD 101 (356)
T 3k96_A 25 MEPFKHPIAILG-AGSWGTALALVLARKGQKVRLWSY-ESDHVDEMQAEGVNNRYLPNYP-FPETLKAYCDLKASLEGVT 101 (356)
T ss_dssp --CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECS-CHHHHHHHHHHSSBTTTBTTCC-CCTTEEEESCHHHHHTTCC
T ss_pred ccccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHcCCCcccCCCCc-cCCCeEEECCHHHHHhcCC
Confidence 333456899999 699999999999999999999999 6544333332111000001111 0111111234566777889
Q ss_pred EEEEe
Q 026091 81 GVIHV 85 (243)
Q Consensus 81 ~vi~~ 85 (243)
+||-+
T Consensus 102 vVila 106 (356)
T 3k96_A 102 DILIV 106 (356)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88855
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0002 Score=59.27 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHh-ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAI-AGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~-~~~ 79 (243)
..++|+|+||+|.+|..+++.+...|++|++++| +++..+.+..+. .. ..+ |..+.+ .+.+.. .++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~G------a~-~~~--~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS-SDEKSAFLKSLG------CD-RPI--NYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT------CS-EEE--ETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHcC------Cc-EEE--ecCChhHHHHHHHhcCCCC
Confidence 3578999999999999999999999999999998 554433333221 11 222 333322 222222 258
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
|+||++++. .. ....++.++..| +++.+++..
T Consensus 233 D~vid~~g~----------~~-------~~~~~~~l~~~G---~iv~~g~~~ 264 (362)
T 2c0c_A 233 DVVYESVGG----------AM-------FDLAVDALATKG---RLIVIGFIS 264 (362)
T ss_dssp EEEEECSCT----------HH-------HHHHHHHEEEEE---EEEECCCGG
T ss_pred CEEEECCCH----------HH-------HHHHHHHHhcCC---EEEEEeCCC
Confidence 999999762 11 223445555444 888888743
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00053 Score=55.76 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=70.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhh-hhhc-CCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLS-FLTN-LPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+||.|+|+ |.+|+.++..|++.|+ +|.+++| +++...... .+.. .+ ......... +|. +.++++|+
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~-~~~~~~~~~~~l~~~~~-~~~~~~i~~---~d~----~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV-DKKRAEGDALDLIHGTP-FTRRANIYA---GDY----ADLKGSDV 70 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGG-GSCCCEEEE---CCG----GGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHHHHHhhhh-hcCCcEEEe---CCH----HHhCCCCE
Confidence 37999997 9999999999999998 9999999 543322211 1111 10 001122221 232 24678999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
||-+++...... ....+....|......+++.+.+..+-..++.+|
T Consensus 71 Viiav~~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 71 VIVAAGVPQKPG-ETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp EEECCCCCCCSS-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEccCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 998887544321 2234777888888889988888776223444443
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=8.7e-05 Score=60.91 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=54.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
+++|+|.||||++|+.+++.|.++++ ++.++..++.... ... . .+..+.+ .|. +++. ++++|+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~-~~~----~--~g~~i~~--~~~-~~~~----~~~~Dv 71 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMG----F--AESSLRV--GDV-DSFD----FSSVGL 71 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEE----E--TTEEEEC--EEG-GGCC----GGGCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC-ccc----c--CCcceEE--ecC-CHHH----hcCCCE
Confidence 36899999999999999999997764 4555543122111 000 0 0111121 122 1222 468999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
|+.+.+.. .+..+.+.+.+.| + ++|.+|+..
T Consensus 72 V~~a~g~~-----------------~s~~~a~~~~~aG-~-kvId~Sa~~ 102 (340)
T 2hjs_A 72 AFFAAAAE-----------------VSRAHAERARAAG-C-SVIDLSGAL 102 (340)
T ss_dssp EEECSCHH-----------------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred EEEcCCcH-----------------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence 99876431 1335556666778 4 477777753
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0012 Score=54.60 Aligned_cols=175 Identities=10% Similarity=-0.005 Sum_probs=97.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-----eEEEEEeCCchh----hchhhhhhcCCCCCCCeEEEecCCCChhhHHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-----SVRTTVRSDPEQ----KRDLSFLTNLPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
+.||.|+||+|.||++++-.|+..+. .+.+...+.+.. ......+.+... .-...+.. . ..-.+.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~--p~~~~v~i--~--~~~y~~ 105 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--PLLREVSI--G--IDPYEV 105 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTEEEEEE--E--SCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh--hhcCCcEE--e--cCCHHH
Confidence 46899999999999999999988762 265554422221 111222222110 01111111 1 123567
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCCCcccccCC-CCCchhh
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGKDVDMLDET-FWSDVDY 153 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~~~~~~~e~-~~~~~~~ 153 (243)
++++|+||-+||.... .-....+.++.|..-...+.+.+.+. ++-..++.+|-..-.-.+ ...... .+
T Consensus 106 ~~daDvVVitag~prk-pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~----ia~k~sg~~----- 175 (375)
T 7mdh_A 106 FEDVDWALLIGAKPRG-PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNAL----ICLKNAPDI----- 175 (375)
T ss_dssp TTTCSEEEECCCCCCC-TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTS-----
T ss_pred hCCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHH----HHHHHcCCC-----
Confidence 7899999999886443 22445689999999999999988875 523455555542100000 000000 00
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCC
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFIC 200 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~ 200 (243)
++..--+.+....-++-..++++.|++...++-..|+|....
T Consensus 176 -----~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd 217 (375)
T 7mdh_A 176 -----PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 217 (375)
T ss_dssp -----CGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST
T ss_pred -----CccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC
Confidence 011112334444455555667777887666665578887544
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00022 Score=56.53 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=43.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEE-EeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTT-VRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
|.||.|+||+|.+|+.+++.+.+. ++++.++ +| +..... ...+.... ++. . ++.-.+++.++++++|+|
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~-~~~~~~-G~d~gel~----g~~--~-gv~v~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDR-TGSPQL-GQDAGAFL----GKQ--T-GVALTDDIERVCAEADYL 77 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCC-TTCTTT-TSBTTTTT----TCC--C-SCBCBCCHHHHHHHCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEe-cCcccc-cccHHHHh----CCC--C-CceecCCHHHHhcCCCEE
Confidence 579999999999999999999876 5777765 45 321110 00001110 000 0 222234556666678888
Q ss_pred EEee
Q 026091 83 IHVA 86 (243)
Q Consensus 83 i~~a 86 (243)
|.++
T Consensus 78 IDfT 81 (272)
T 4f3y_A 78 IDFT 81 (272)
T ss_dssp EECS
T ss_pred EEcC
Confidence 8875
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=59.32 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=51.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~ 78 (243)
..++|+|+||+|.+|..+++.+...|++|+++++ +++..+.+..+.. . ..+ |..+. +.+.++.. +
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~lga------~-~~~--~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR-NNKHTEELLRLGA------A-YVI--DTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC------S-EEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhCCC------c-EEE--eCCcccHHHHHHHHhCCCC
Confidence 3579999999999999999999889999999998 5444333333211 1 222 44443 33444443 6
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||+++|.
T Consensus 214 ~Dvvid~~g~ 223 (340)
T 3gms_A 214 ADAAIDSIGG 223 (340)
T ss_dssp EEEEEESSCH
T ss_pred CcEEEECCCC
Confidence 8999999864
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0001 Score=59.95 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=69.2
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchh-hhhhcC---CCCCCCeEEEecCCCChhhHHHH
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDL-SFLTNL---PRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
|+ ++++|.|+|| |.+|+.++..|++.|+ +|.+.+++ ++..... ..+... .....++... . | + +.
T Consensus 1 M~-~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~-~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a 69 (317)
T 2ewd_A 1 MI-ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIA-EGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-AD 69 (317)
T ss_dssp CC-CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS-SSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GG
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-chHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HH
Confidence 55 3468999996 9999999999999998 99999984 4322221 111110 0001122211 1 2 2 35
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
++++|+||-+++........ ..+....|......+++.+.+..+-..++.+|.
T Consensus 70 ~~~aDiVi~avg~p~~~g~~-r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 70 ISGSDVVIITASIPGRPKDD-RSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp GTTCSEEEECCCCSSCCSSC-GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred hCCCCEEEEeCCCCCCCCCc-HHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 67899999998764432111 124455677777777777777652234444443
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00016 Score=59.93 Aligned_cols=72 Identities=15% Similarity=0.275 Sum_probs=48.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc--hhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHhcccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP--EQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAIAGCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d 80 (243)
.++|+|+|| |.+|..+++.+...|++|++++|+.. +..+.+..+ +...+ | .+ .+.+.+.-.++|
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~--------ga~~v--~-~~~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET--------KTNYY--N-SSNGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH--------TCEEE--E-CTTCSHHHHHHHCCEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh--------CCcee--c-hHHHHHHHHHhCCCCC
Confidence 689999999 99999999999989999999999431 333222222 33333 4 43 223333114699
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+||+++|.
T Consensus 249 ~vid~~g~ 256 (366)
T 2cdc_A 249 VIIDATGA 256 (366)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999874
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0002 Score=60.54 Aligned_cols=68 Identities=16% Similarity=0.253 Sum_probs=53.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+++|+|+| .|.+|+.+++++.+.|++|++++. .+.... ..+ .-+.+..|..|.+.+.++++++|+|+
T Consensus 34 ~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~-~~~~p~--~~~--------ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 34 PGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDP-DPASPA--GAV--------ADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CTTCHH--HHH--------SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECC-CCcCch--hhh--------CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 457999999 689999999999999999998876 332211 111 22566789999999999999999987
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.57 E-value=5.9e-05 Score=61.81 Aligned_cols=69 Identities=13% Similarity=0.101 Sum_probs=56.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
++++|+| .|.+|+.+++.|.+.|+ |+++.+ +++... + .. .++..+.+|.+|++.++++ ++++|.|+-
T Consensus 116 ~~viI~G-~G~~g~~l~~~L~~~g~-v~vid~-~~~~~~-~---~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 116 RHVVICG-WSESTLECLRELRGSEV-FVLAED-ENVRKK-V---LR-----SGANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp CEEEEES-CCHHHHHHHTTGGGSCE-EEEESC-GGGHHH-H---HH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCc-EEEEeC-Chhhhh-H---Hh-----CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 4799999 59999999999999999 988888 554332 2 22 3789999999999999988 788999886
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 184 ~~ 185 (336)
T 1lnq_A 184 DL 185 (336)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=58.58 Aligned_cols=113 Identities=12% Similarity=0.032 Sum_probs=68.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch-hhhhhcCC---CCCCCeEEEecCCCChhhHHHHhccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD-LSFLTNLP---RASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
++||.|+|| |.+|..++..|+..|+ +|.+.+++ ++..+. ...+.... ....++... .| + +.++++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~-~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~a 83 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDII-EGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNS 83 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSS-TTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECC-HHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCC
Confidence 358999997 9999999999999998 99999984 432221 11111100 001122221 22 3 457889
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|+||-+++........ ..+....|..-...+.+.+.+..+-..++..|
T Consensus 84 D~VI~avg~p~k~g~t-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 131 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMT-RSDLLTVNAKIVGSVAENVGKYCPNAFVICIT 131 (328)
T ss_dssp SEEEECCSCCCCTTCC-SGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEcCCCCCCCCCc-hhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999998754321111 12456678888888888887776222344443
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.52 E-value=7.4e-05 Score=60.37 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=31.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
|++|.|+| +|.+|+.++..|.+.|++|++++| +++.
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r-~~~~ 38 (316)
T 2ew2_A 3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQ-WPAH 38 (316)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEEC-CHHH
Confidence 56899999 599999999999999999999999 5543
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00062 Score=55.08 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=64.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhh-hhhc-CCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLS-FLTN-LPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|.|+| +|.+|..++..|++.| ++|.+++| +++...... .+.. .......+.....| . +.++++|+
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDv 72 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADV 72 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcC-CHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCE
Confidence 5899999 7999999999999999 89999999 543332221 1111 00001123332222 2 35678999
Q ss_pred EEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 82 VIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 82 vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
||-+++.... .. ....+....|+.....+++.+.+..
T Consensus 73 Viiav~~~~~~~~~~g-~~r~~l~~~n~~i~~~i~~~i~~~~ 113 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPT-GDRFAELKFTSSMVQSVGTNLKESG 113 (309)
T ss_dssp EEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCcccCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9988875331 11 1112456677777788888887766
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00058 Score=55.04 Aligned_cols=24 Identities=29% Similarity=0.304 Sum_probs=22.8
Q ss_pred hhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 15 GFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 15 G~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|-.|.+++++++++|++|+.+.|.
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cHHHHHHHHHHHHCCCEEEEEecC
Confidence 889999999999999999999993
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00025 Score=59.98 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=33.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
.|.+|.|+| +||+|..++..|++.|++|++++. +++..
T Consensus 20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Di-d~~kV 57 (444)
T 3vtf_A 20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDV-NPSIV 57 (444)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CHHHH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEEC-CHHHH
Confidence 467999999 899999999999999999999999 65443
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00049 Score=58.44 Aligned_cols=94 Identities=16% Similarity=0.273 Sum_probs=61.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-C---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC--CCh-hhHHHHhcc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-Y---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL--NNP-ESFDAAIAG 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~-~~~~~~~~~ 78 (243)
+||+|+| .|.||+.++..|+++. . +|++++. .....+... .. ++.+...++ .|. +.+.+++++
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~-~~~~~~~~~---~~-----g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAA-EGTKVDVAQ---QY-----GVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEES-SCCSCCHHH---HH-----TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEecc-chhhhhHHh---hc-----CCceeEEeccchhHHHHHHHHhcC
Confidence 6899999 8999999999998874 4 6777776 332222111 11 345555555 444 346667776
Q ss_pred ccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 79 CTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
.|+|||++-+. . ...++++|.++| +-|++++
T Consensus 84 ~DvVIN~s~~~-----~------------~l~Im~acleaG----v~YlDTa 114 (480)
T 2ph5_A 84 NDFLIDVSIGI-----S------------SLALIILCNQKG----ALYINAA 114 (480)
T ss_dssp TCEEEECCSSS-----C------------HHHHHHHHHHHT----CEEEESS
T ss_pred CCEEEECCccc-----c------------CHHHHHHHHHcC----CCEEECC
Confidence 79999854221 1 347889999999 4566665
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0011 Score=52.97 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=65.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhh-------------------hhhcCCCCCCCeEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLS-------------------FLTNLPRASERLQIFN 63 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 63 (243)
..++|+|+| .|.+|+++++.|+..| -++++++.+. -...++. .+... ...-+++.+.
T Consensus 35 ~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~-Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~ 111 (292)
T 3h8v_A 35 RTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDK-VELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHN 111 (292)
T ss_dssp GGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB-C------------CCTTSBHHHHHHHHHHHH-CTTSEEEEEC
T ss_pred hCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCc-cChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEec
Confidence 357899999 7999999999999999 5788887632 1111111 11111 1233566777
Q ss_pred cCCCChhhHHHHh-----------ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 64 ADLNNPESFDAAI-----------AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 64 ~D~~d~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
.++++.+.+.+++ +++|+||.+. |.+. .-..+.++|.+.+ ..+|+.+.
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~--------Dn~~--------~R~~in~~c~~~~--~Pli~~gv 170 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV--------DNFE--------ARMTINTACNELG--QTWMESGV 170 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC--------SSHH--------HHHHHHHHHHHHT--CCEEEEEE
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC--------cchh--------hhhHHHHHHHHhC--CCEEEeee
Confidence 7887766676665 5789999663 3221 1134566777777 45666544
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00029 Score=57.83 Aligned_cols=73 Identities=19% Similarity=0.142 Sum_probs=48.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC-hhhHHHHhc--ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN-PESFDAAIA--GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d 80 (243)
..++|||+||+|.+|..+++.+...|++|+++ + +++..+.+..+ +...+. +-.+ .+.+.+... ++|
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~-~~~~~~~~~~l--------Ga~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-A-RGSDLEYVRDL--------GATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E-CHHHHHHHHHH--------TSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e-CHHHHHHHHHc--------CCCEec-cCCCHHHHHHHHhcCCCce
Confidence 35789999999999999999999999999988 6 55443333322 223332 2112 233334433 689
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
+|++++|
T Consensus 219 ~vid~~g 225 (343)
T 3gaz_A 219 LVYDTLG 225 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999976
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00026 Score=56.33 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=49.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..|+++|+|+ |.+|++++..|.+.|. +|++..| +.+....+. ..+..+ ..+++.++++++|+|
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R-~~~~a~~la---------~~~~~~-----~~~~~~~~~~~aDiV 179 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANR-TMSRFNNWS---------LNINKI-----NLSHAESHLDEFDII 179 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECS-CGGGGTTCC---------SCCEEE-----CHHHHHHTGGGCSEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHH---------Hhcccc-----cHhhHHHHhcCCCEE
Confidence 4579999995 8999999999999998 8999999 553332221 122221 345667778889999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
|++...
T Consensus 180 InaTp~ 185 (277)
T 3don_A 180 INTTPA 185 (277)
T ss_dssp EECCC-
T ss_pred EECccC
Confidence 988643
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00029 Score=58.66 Aligned_cols=75 Identities=19% Similarity=0.168 Sum_probs=54.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+++|+|+|+ |.+|+.+++.+...|++|++.+| ++...+.+... . +..+ ..+..+.+.+.++++++|+||
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~-~~~~l~~~~~~--~---g~~~---~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDI-NIDKLRQLDAE--F---CGRI---HTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--T---TTSS---EEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHh--c---CCee---EeccCCHHHHHHHHcCCCEEE
Confidence 4689999997 99999999999999999999999 55433222211 1 1122 123345667888888999999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
++++.
T Consensus 237 ~~~~~ 241 (377)
T 2vhw_A 237 GAVLV 241 (377)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 98764
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0014 Score=52.75 Aligned_cols=111 Identities=16% Similarity=0.119 Sum_probs=70.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.++||.|+|| |.+|+.++..|+..|. +|.+++++ ++.......+.... ..+++.. .| + +.++++|+
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~-~~~~g~a~dl~~~~--~~~i~~t-~d------~-~~l~~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLS-EGTKGATMDLEIFN--LPNVEIS-KD------L-SASAHSKV 80 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT--CTTEEEE-SC------G-GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCC-cchHHHHHHHhhhc--CCCeEEe-CC------H-HHHCCCCE
Confidence 3578999995 9999999999999998 89999984 32222222222211 1244442 22 3 44789999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
||-+++...+ .....+....|..-...+++.+.+..+-..++.+|
T Consensus 81 Vi~aag~~~p--G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s 125 (303)
T 2i6t_A 81 VIFTVNSLGS--SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS 125 (303)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred EEEcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 9999987432 23445778889998999999888876223444444
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00096 Score=47.23 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=29.1
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r 37 (243)
++++|.|+|++ |.+|..+++.|.+.|++|+.+.+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp 49 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP 49 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCC
Confidence 46799999987 99999999999999999776655
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00033 Score=58.09 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=53.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+|+ |.+|..+++.+...|++|+++++ +++..+... ..+ +.. ...|..+.+.+.++..++|+||
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~--~~l-----Ga~-~v~~~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIST-SPSKKEEAL--KNF-----GAD-SFLVSRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CGGGHHHHH--HTS-----CCS-EEEETTCHHHHHHTTTCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hhc-----CCc-eEEeccCHHHHHHhhCCCCEEE
Confidence 3578999995 99999999999989999999998 543322221 011 111 1235666677777777899999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
++++.
T Consensus 257 d~~g~ 261 (366)
T 1yqd_A 257 DTVSA 261 (366)
T ss_dssp ECCSS
T ss_pred ECCCc
Confidence 99874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00037 Score=57.32 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=50.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--ccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA--GCT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d 80 (243)
++++|+||+|.+|...++.+...|++|+++++ +++..+.+..+. ....+ |..+. +.+.++.. ++|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~~G-------a~~~~--~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR-RDEQIALLKDIG-------AAHVL--NEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHT-------CSEEE--ETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CCEEE--ECCcHHHHHHHHHHhcCCCCc
Confidence 68999999999999999999989999999998 554444443321 11222 33333 33444433 699
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+|++++|.
T Consensus 236 ~vid~~g~ 243 (349)
T 3pi7_A 236 IFLDAVTG 243 (349)
T ss_dssp EEEESSCH
T ss_pred EEEECCCC
Confidence 99999763
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0003 Score=57.65 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=49.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~ 81 (243)
.++|+|+|| |.+|..+++.+...|++|++++| +++..+.+..+ +... ..|..+.+ .+.++..++|+
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~l--------Ga~~-~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI-GDEKLELAKEL--------GADL-VVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHT--------TCSE-EECTTTSCHHHHHHHHHSSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHC--------CCCE-EecCCCccHHHHHHHHhCCCCE
Confidence 578999999 77999999999999999999998 55444333322 1111 23555432 33333357999
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||++++.
T Consensus 234 vid~~g~ 240 (339)
T 1rjw_A 234 AVVTAVS 240 (339)
T ss_dssp EEESSCC
T ss_pred EEECCCC
Confidence 9999763
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.40 E-value=2.3e-05 Score=62.83 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+++|+|+ |.+|+++++.|++.| +|++..| +.+....+. .+.... .... .+.+|+.+. .+.+.++|+|
T Consensus 127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r-~~~~~~~l~~~~~~~~--~~~~-~~~~d~~~~---~~~~~~~Dil 197 (287)
T 1nvt_A 127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANR-TVEKAEALAKEIAEKL--NKKF-GEEVKFSGL---DVDLDGVDII 197 (287)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECS-SHHHHHHHHHHHHHHH--TCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEEC-CHHHHHHHHHHHhhhc--cccc-ceeEEEeeH---HHhhCCCCEE
Confidence 4689999997 599999999999999 9999999 543322221 111100 0000 112333332 3345678999
Q ss_pred EEeeeccC
Q 026091 83 IHVAAPID 90 (243)
Q Consensus 83 i~~a~~~~ 90 (243)
||+++...
T Consensus 198 Vn~ag~~~ 205 (287)
T 1nvt_A 198 INATPIGM 205 (287)
T ss_dssp EECSCTTC
T ss_pred EECCCCCC
Confidence 99998643
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00032 Score=57.88 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=28.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
++||.|.||||++|+.+++.|.+.. .+|.++.+
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 3689999999999999999998765 68888876
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00038 Score=56.02 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=31.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++++|.|+||+|.+|+.++..|.+.|++|.+.+|+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 34689999999999999999999999999999884
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00037 Score=59.20 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=48.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeE-EE-----ecCCCChhhHHHHhcccc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ-IF-----NADLNNPESFDAAIAGCT 80 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~D~~d~~~~~~~~~~~d 80 (243)
+|.|+| +|++|+.++..|++.|++|++++| +++..+.+..-. .+.....+. .+ .+.+.-..++.++++++|
T Consensus 2 kI~VIG-~G~vG~~~A~~la~~G~~V~~~d~-~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDV-SSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 799999 899999999999999999999999 554433332100 000000000 00 011211234556677899
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+||-+...
T Consensus 79 vviiaVpt 86 (436)
T 1mv8_A 79 VSFICVGT 86 (436)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99988753
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0019 Score=52.24 Aligned_cols=170 Identities=14% Similarity=0.152 Sum_probs=93.8
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||.|+|| |.+|..++..|+..+. +|.+++++..........+.+.. ......++... .| . +.++++|+||-
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NS---Y-EDMRGSDIVLV 73 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CC---H-HHhCCCCEEEE
Confidence 5899997 9999999999988887 69999984322211122221100 00112222221 12 2 35789999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
+++...... ....+....|..-...+++.+.+..+-..++.+|-.... +.+-.+.. ..-|+....
T Consensus 74 ~ag~~~k~G-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~---------~t~~~~k~-----~~~p~~rvi 138 (308)
T 2d4a_B 74 TAGIGRKPG-MTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDA---------MTYVMYKK-----TGFPRERVI 138 (308)
T ss_dssp CCSCCCCSS-CCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---------HHHHHHHH-----HCCCGGGEE
T ss_pred eCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHH---------HHHHHHHh-----cCCChhhEE
Confidence 988654322 223477888999999999999887623355555432100 00000000 000122234
Q ss_pred Hh-hHHHHHHHHHHHHHHcCccEEEEccCceeCCCC
Q 026091 165 KL-SKTLAERAALEFAEEHGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 165 ~~-sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~ 199 (243)
|. +-...-++...+++..|++..-++. .++|.+.
T Consensus 139 G~gt~LD~~R~~~~la~~lgv~~~~v~~-~v~G~Hg 173 (308)
T 2d4a_B 139 GFSGILDSARMAYYISQKLGVSFKSVNA-IVLGMHG 173 (308)
T ss_dssp ECCHHHHHHHHHHHHHHHHTSCGGGEEC-CEEBCSS
T ss_pred EecccchHHHHHHHHHHHhCcChhHeEE-EEEeccC
Confidence 44 3333455555566666776655554 4888653
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00087 Score=55.95 Aligned_cols=68 Identities=10% Similarity=0.104 Sum_probs=52.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+|+|+|+| .|.+|+.+++++.+.|++|++++. .+.... . ...-..+..|..|.+.+.++++++|+|.
T Consensus 13 ~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~-~~~~~~--~--------~~ad~~~~~~~~d~~~l~~~~~~~dvI~ 80 (389)
T 3q2o_A 13 PGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDP-TKNSPC--A--------QVADIEIVASYDDLKAIQHLAEISDVVT 80 (389)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-STTCTT--T--------TTCSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeC-CCCCch--H--------HhCCceEecCcCCHHHHHHHHHhCCEee
Confidence 457999999 688999999999999999999987 332110 0 0122456689999999999999999874
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00067 Score=57.92 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=36.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL 49 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 49 (243)
..+|+|+||+|.+|...++.+...|++|+++++ +++..+.+..+
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~-~~~~~~~~~~l 272 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAM 272 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC-CHHHHHHHHhh
Confidence 568999999999999999999999999999998 66555444433
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00056 Score=56.19 Aligned_cols=74 Identities=16% Similarity=0.058 Sum_probs=50.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHh-cccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAI-AGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~-~~~d 80 (243)
..++|+|+||+|.+|...++.+...|++|+++++ +++..+.+..+.. ...+ |..+ .+.+.++- +++|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lGa-------~~vi--~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS-RNETIEWTKKMGA-------DIVL--NHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC-SHHHHHHHHHHTC-------SEEE--CTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcCC-------cEEE--ECCccHHHHHHHhCCCCcc
Confidence 3578999999999999999999989999999998 5554444443321 1222 2222 23333332 2589
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
+|+++++
T Consensus 220 vv~d~~g 226 (346)
T 3fbg_A 220 YVFCTFN 226 (346)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999876
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0017 Score=50.86 Aligned_cols=104 Identities=18% Similarity=0.245 Sum_probs=62.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchh--------------------hhhhcCCCCCCCeEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDL--------------------SFLTNLPRASERLQIFN 63 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 63 (243)
.++|+|+| .|.+|+++++.|+..|. ++++++++ .-...++ ..+... ..+-+++.+.
T Consensus 28 ~~~VlvvG-~GglG~~va~~La~~Gvg~i~lvD~d-~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~ 104 (251)
T 1zud_1 28 DSQVLIIG-LGGLGTPAALYLAGAGVGTLVLADDD-DVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL-NPDIQLTALQ 104 (251)
T ss_dssp TCEEEEEC-CSTTHHHHHHHHHHTTCSEEEEECCC-BCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEEC
T ss_pred cCcEEEEc-cCHHHHHHHHHHHHcCCCeEEEEeCC-CcccccCCCCccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEEe
Confidence 47899999 58899999999999995 67777653 2111111 111110 0122345555
Q ss_pred cCCCChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 64 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
.+++ .+.+.++++++|+||.+. +... .-..+.++|++.+ ..+|+.+..
T Consensus 105 ~~~~-~~~~~~~~~~~DvVi~~~--------d~~~--------~r~~l~~~~~~~~--~p~i~~~~~ 152 (251)
T 1zud_1 105 QRLT-GEALKDAVARADVVLDCT--------DNMA--------TRQEINAACVALN--TPLITASAV 152 (251)
T ss_dssp SCCC-HHHHHHHHHHCSEEEECC--------SSHH--------HHHHHHHHHHHTT--CCEEEEEEE
T ss_pred ccCC-HHHHHHHHhcCCEEEECC--------CCHH--------HHHHHHHHHHHhC--CCEEEEecc
Confidence 4443 456778888999999773 2221 1234556677777 356666543
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.001 Score=55.44 Aligned_cols=73 Identities=11% Similarity=0.138 Sum_probs=54.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--c
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--G 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~ 78 (243)
|..++|+|+|+|+ |.+|..+++.+.+.|++|+++.. .+..... .. .-+.+..|..|.+.+.++++ +
T Consensus 7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~-~~~~~~~-----~~-----~d~~~~~~~~d~~~l~~~~~~~~ 74 (391)
T 1kjq_A 7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDR-YADAPAM-----HV-----AHRSHVINMLDGDALRRVVELEK 74 (391)
T ss_dssp TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEES-STTCGGG-----GG-----SSEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEC-CCCCchh-----hh-----ccceEECCCCCHHHHHHHHHHcC
Confidence 5556789999985 78999999999999999999887 4322110 00 12456678889988888886 6
Q ss_pred ccEEEEe
Q 026091 79 CTGVIHV 85 (243)
Q Consensus 79 ~d~vi~~ 85 (243)
+|+|+..
T Consensus 75 ~d~v~~~ 81 (391)
T 1kjq_A 75 PHYIVPE 81 (391)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8998763
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00088 Score=55.69 Aligned_cols=69 Identities=14% Similarity=0.229 Sum_probs=52.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||+|+|+|+ |..|+.+++.|.+.|++|+++.. .+.... .. . .-..+..|..|.+.+.++++++|.|+.
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~-~~~~~~--~~---~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~ 68 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDP-TPRSPA--GQ---V-----ADEQIVAGFFDSERIEDLVKGSDVTTY 68 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-STTCTT--GG---G-----SSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCCch--hh---h-----CceEEECCCCCHHHHHHHHhcCCEEEe
Confidence 478999995 89999999999999999998887 332211 10 1 124567899999999999888999875
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
.
T Consensus 69 ~ 69 (380)
T 3ax6_A 69 D 69 (380)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00032 Score=56.80 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
.|++|.|+| +|.+|..+++.|++.|++|++.+| +++..
T Consensus 20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~ 57 (310)
T 3doj_A 20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNR-TLSKC 57 (310)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGGG
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHH
Confidence 467999999 899999999999999999999999 55433
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00024 Score=56.82 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=32.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
|++|.|+| +|.+|+.+++.|++.|++|++.+| +++..
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~ 37 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNR-NPAKC 37 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECS-SGGGG
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHHHH
Confidence 35899998 899999999999999999999999 55433
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00018 Score=58.10 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=32.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
++++|.|+| +|.+|+.+++.|++.|++|++.+| +++..
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~ 43 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADL-NPQAC 43 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEEC-CHHHH
Confidence 356899998 899999999999999999999999 65433
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00039 Score=57.15 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=49.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA--G 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~ 78 (243)
.++|+|+|| |.+|..+++.+...|+ +|++++| +++..+.+..+.. ... .|..+.+ .+.++.. +
T Consensus 168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~-~~~~~~~~~~~Ga-------~~~--~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP-SDFRRELAKKVGA-------DYV--INPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS-CHHHHHHHHHHTC-------SEE--ECTTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHhCC-------CEE--ECCCCcCHHHHHHHHcCCCC
Confidence 468999999 9999999999988998 9999998 5544433332211 122 2444432 3334333 5
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+||++++
T Consensus 237 ~D~vid~~g 245 (348)
T 2d8a_A 237 VDVFLEFSG 245 (348)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 899999976
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00026 Score=54.33 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEE-EEeCCchh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRT-TVRSDPEQ 42 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~ 42 (243)
+|++|.|+| +|.+|.++++.|.+.|++|.+ .+| +++.
T Consensus 22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r-~~~~ 59 (220)
T 4huj_A 22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSR-GPAS 59 (220)
T ss_dssp GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTT-CGGG
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-CHHH
Confidence 367999999 899999999999999999998 667 5543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00025 Score=61.67 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=43.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.|+++|+|| |.+|++++.+|++.|++|+++.| +.+....+.. .. +..+. ++.|.+.+ ....+|++||
T Consensus 364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R-~~~~a~~la~--~~---~~~~~----~~~dl~~~--~~~~~DilVN 430 (523)
T 2o7s_A 364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANR-TYERALELAE--AI---GGKAL----SLTDLDNY--HPEDGMVLAN 430 (523)
T ss_dssp --CEEEECC-SHHHHHHHHHHHHHCC-CEEEES-SHHHHHHHHH--HT---TC-CE----ETTTTTTC----CCSEEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hc---CCcee----eHHHhhhc--cccCceEEEE
Confidence 568999998 79999999999999999999999 5433322211 11 11121 12221111 1235799999
Q ss_pred eeecc
Q 026091 85 VAAPI 89 (243)
Q Consensus 85 ~a~~~ 89 (243)
+++..
T Consensus 431 ~agvg 435 (523)
T 2o7s_A 431 TTSMG 435 (523)
T ss_dssp CSSTT
T ss_pred CCCCC
Confidence 99863
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00096 Score=53.53 Aligned_cols=69 Identities=14% Similarity=0.249 Sum_probs=50.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+| .|.+|+.+++.|...|.+|++.+| +........ .. +++.+ +.+++.++++++|+|+
T Consensus 154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr-~~~~~~~~~---~~-----g~~~~-----~~~~l~~~l~~aDvVi 218 (293)
T 3d4o_A 154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGAR-ESDLLARIA---EM-----GMEPF-----HISKAAQELRDVDVCI 218 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH---HT-----TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHH---HC-----CCeec-----ChhhHHHHhcCCCEEE
Confidence 468999999 799999999999999999999999 543322221 11 23332 2356778889999999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+..
T Consensus 219 ~~~p 222 (293)
T 3d4o_A 219 NTIP 222 (293)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8863
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00026 Score=56.23 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..|+++|+|+ |.+|++++..|++.|++|++..| +.+....+. .+... ..+.. .|+ +.+.+ .++|+|
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R-~~~~a~~l~~~~~~~----~~~~~--~~~---~~~~~--~~~Div 184 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR-TFSKTKELAERFQPY----GNIQA--VSM---DSIPL--QTYDLV 184 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES-SHHHHHHHHHHHGGG----SCEEE--EEG---GGCCC--SCCSEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHcccc----CCeEE--eeH---HHhcc--CCCCEE
Confidence 4689999996 88999999999999999999999 554332222 11110 12222 222 12111 378999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|++++..
T Consensus 185 In~t~~~ 191 (272)
T 1p77_A 185 INATSAG 191 (272)
T ss_dssp EECCCC-
T ss_pred EECCCCC
Confidence 9998753
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0011 Score=53.36 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=51.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+| .|.+|+.+++.|...|++|++.+| +......+. .. +++.+ +..++.++++++|+|+
T Consensus 156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~-~~~~~~~~~---~~-----g~~~~-----~~~~l~~~l~~aDvVi 220 (300)
T 2rir_A 156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGAR-SSAHLARIT---EM-----GLVPF-----HTDELKEHVKDIDICI 220 (300)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH---HT-----TCEEE-----EGGGHHHHSTTCSEEE
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---HC-----CCeEE-----chhhHHHHhhCCCEEE
Confidence 468999999 699999999999999999999999 553322221 11 23322 2346788889999999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
.+...
T Consensus 221 ~~~p~ 225 (300)
T 2rir_A 221 NTIPS 225 (300)
T ss_dssp ECCSS
T ss_pred ECCCh
Confidence 88654
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0023 Score=54.52 Aligned_cols=75 Identities=15% Similarity=0.043 Sum_probs=52.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-ccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-CTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~v 82 (243)
++|+|+|+|. |..|..+++.|.++|++|.+.+++..........+... +++++.+.- ++ +++++ +|.|
T Consensus 8 ~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~-----gi~~~~g~~--~~---~~~~~~~d~v 76 (451)
T 3lk7_A 8 ENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE-----GIKVVCGSH--PL---ELLDEDFCYM 76 (451)
T ss_dssp TTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT-----TCEEEESCC--CG---GGGGSCEEEE
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC-----CCEEEECCC--hH---HhhcCCCCEE
Confidence 4689999996 99999999999999999999998442222222333332 667766543 22 23455 8999
Q ss_pred EEeeecc
Q 026091 83 IHVAAPI 89 (243)
Q Consensus 83 i~~a~~~ 89 (243)
|.+.|..
T Consensus 77 v~spgi~ 83 (451)
T 3lk7_A 77 IKNPGIP 83 (451)
T ss_dssp EECTTSC
T ss_pred EECCcCC
Confidence 9887753
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00054 Score=56.71 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=53.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC-----------------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL----------------- 66 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~----------------- 66 (243)
..++|+|+|+ |-+|..+++.+...|.+|++.+| ++...+.+..+ +.+++..|.
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~l--------Ga~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDV-RPEVAEQVRSV--------GAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECS-SGGGHHHHHHT--------TCEECCCC-------------CHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeccccccccccchhhhhHHHH
Confidence 3579999995 99999999999999999999999 55443333322 334433221
Q ss_pred -CChhhHHHHhccccEEEEeeec
Q 026091 67 -NNPESFDAAIAGCTGVIHVAAP 88 (243)
Q Consensus 67 -~d~~~~~~~~~~~d~vi~~a~~ 88 (243)
.+.+.+.+.++++|+||.++..
T Consensus 253 ~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 253 AQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCC
T ss_pred hhhHHHHHHHHhcCCEEEECCCC
Confidence 1235778888999999988643
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00044 Score=55.25 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=31.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
++|.|+| +|.+|+.+++.|++.|++|++.+| +++.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~ 36 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNR-SPEK 36 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGG
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcC-CHHH
Confidence 5899999 799999999999999999999999 5543
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0005 Score=56.80 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=28.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
.||.|.||+|++|+.+++.|.++. .+++++.+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~ 49 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTA 49 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeC
Confidence 589999999999999999999876 48888766
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00023 Score=57.74 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=30.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 38 (243)
.+++|.|+| +|.+|+.+++.|++.|+ +|++.+|+
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 457999999 79999999999999999 99999994
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00047 Score=55.55 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=34.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD 45 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (243)
.||||-++| .|.+|+.+++.|++.||+|++..| +++..+.
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr-~~~~~~~ 41 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQSAVDG 41 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHHHHHH
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcC-CHHHHHH
Confidence 368999999 999999999999999999999999 6544433
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=55.66 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+++|+|+| .|.+|+.+++++.+.|++|++++ +........ .+....+.+|..|.+.+.++++++|+|+-
T Consensus 24 ~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~---------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 24 SRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSPAKQI---------SAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGG---------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHh---------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 57999999 58999999999999999999998 443221111 11224567899999999999999998763
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00051 Score=55.84 Aligned_cols=65 Identities=26% Similarity=0.362 Sum_probs=45.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+++|.|+| +|.+|..+++.|++.|++|.+.+| +++..+.+. .. +++. ..++.++++++|+||-
T Consensus 31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~~~l~---~~-----g~~~-------~~~~~e~~~~aDvVi~ 93 (320)
T 4dll_A 31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNR-TPARAASLA---AL-----GATI-------HEQARAAARDADIVVS 93 (320)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHH---TT-----TCEE-------ESSHHHHHTTCSEEEE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcC-CHHHHHHHH---HC-----CCEe-------eCCHHHHHhcCCEEEE
Confidence 46899998 799999999999999999999999 654333322 11 2221 2345566677777775
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 94 ~v 95 (320)
T 4dll_A 94 ML 95 (320)
T ss_dssp CC
T ss_pred EC
Confidence 53
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00047 Score=55.67 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=32.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
++++|.|+| .|.+|+.+++.|++.|++|++.+| +++..
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~ 45 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNR-SPGKA 45 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CHHHH
Confidence 357899998 899999999999999999999999 55433
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00056 Score=55.57 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
...+|+|+||+|.+|...++.+...|.+|+++.+ ... .+.+..+ +... ..|..+.+.+.+.++++|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~-~~~~~~l--------Ga~~-~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRN-HAFLKAL--------GAEQ-CINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHH-HHHHHHH--------TCSE-EEETTTSCHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cch-HHHHHHc--------CCCE-EEeCCCcchhhhhccCCCEEE
Confidence 3578999999999999999999989999988875 332 3233322 1111 235555554666678899999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+.|
T Consensus 221 d~~g 224 (321)
T 3tqh_A 221 DLVG 224 (321)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9876
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0017 Score=53.63 Aligned_cols=70 Identities=16% Similarity=0.196 Sum_probs=51.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC-CChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL-NNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~d~vi 83 (243)
||+|+|+| .|..|..+++.+.+.|++|++++. ++..... .-.-+++..|. .|.+.+..+.+++|+|+
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~-~~~~~~~----------~~aD~~~~~~~~~d~~~~~~~~~~~D~v~ 68 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDK-NPQALIR----------NYADEFYCFDVIKEPEKLLELSKRVDAVL 68 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CTTCTTT----------TTSSEEEECCTTTCHHHHHHHHTSSSEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCChhH----------hhCCEEEECCCCcCHHHHHHHhcCCCEEE
Confidence 68999999 689999999999999999999987 4422210 11225555665 46777877888999987
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
-..
T Consensus 69 ~~~ 71 (363)
T 4ffl_A 69 PVN 71 (363)
T ss_dssp ECC
T ss_pred ECC
Confidence 543
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00053 Score=58.38 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=35.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS 47 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 47 (243)
..++|+|+||+|.+|...++.+...|.+|+++++ +++..+.+.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~-~~~~~~~~~ 262 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS-SAQKEAAVR 262 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH
Confidence 3578999999999999999999999999999988 665444443
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00024 Score=57.71 Aligned_cols=34 Identities=9% Similarity=-0.071 Sum_probs=31.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 38 (243)
++++|.|+| +|.+|..+++.|++.| ++|++.+|+
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467999999 8999999999999999 999999994
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00079 Score=55.84 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=51.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
..+|||+|+ |.+|...++.+...|++|+++++ +++..+.+..+.. ... .|..+.+.+.++..++|+||.
T Consensus 195 g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~-~~~~~~~a~~lGa-------~~v--i~~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 195 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALGA-------DEV--VNSRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHTC-------SEE--EETTCHHHHHTTTTCEEEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcCC-------cEE--eccccHHHHHHhhcCCCEEEE
Confidence 568999997 88999999988889999999998 5544433333211 122 345555545555567999999
Q ss_pred eeec
Q 026091 85 VAAP 88 (243)
Q Consensus 85 ~a~~ 88 (243)
+++.
T Consensus 264 ~~g~ 267 (369)
T 1uuf_A 264 TVAA 267 (369)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9764
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00033 Score=56.32 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=31.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+++|.|+| +|.+|..+++.|++.|++|++.+| +++
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~ 49 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDI-RIE 49 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECS-STT
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHH
Confidence 45899999 899999999999999999999999 543
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00037 Score=58.57 Aligned_cols=70 Identities=21% Similarity=0.200 Sum_probs=50.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..++|+|+|+ |.+|+.+++.|...|. +|++..| +.... .....+ +...+ +.+++.+.+.++|+
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r-~~~ra~~la~~~--------g~~~~-----~~~~l~~~l~~aDv 230 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYERAVELARDL--------GGEAV-----RFDELVDHLARSDV 230 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHHHHHHHHHH--------TCEEC-----CGGGHHHHHHTCSE
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHHHc--------CCcee-----cHHhHHHHhcCCCE
Confidence 4689999996 9999999999999998 8999999 54332 111111 22221 23456777789999
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||.+.+.
T Consensus 231 Vi~at~~ 237 (404)
T 1gpj_A 231 VVSATAA 237 (404)
T ss_dssp EEECCSS
T ss_pred EEEccCC
Confidence 9998754
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00077 Score=54.10 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=44.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcccc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
|+ ++++|.|+| +|.+|+.+++.|.+.|++|.+.+| +++....+. .. ++.. ..+..++++++|
T Consensus 1 M~-~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-~~~~~~~~~---~~-----g~~~-------~~~~~~~~~~~D 62 (301)
T 3cky_A 1 ME-KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDL-MEANVAAVV---AQ-----GAQA-------CENNQKVAAASD 62 (301)
T ss_dssp ----CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECS-SHHHHHHHH---TT-----TCEE-------CSSHHHHHHHCS
T ss_pred CC-CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHH---HC-----CCee-------cCCHHHHHhCCC
Confidence 54 356899999 799999999999999999998888 554332222 11 2221 123445556678
Q ss_pred EEEEee
Q 026091 81 GVIHVA 86 (243)
Q Consensus 81 ~vi~~a 86 (243)
+||.+.
T Consensus 63 ~vi~~v 68 (301)
T 3cky_A 63 IIFTSL 68 (301)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 877664
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00071 Score=55.67 Aligned_cols=36 Identities=25% Similarity=0.130 Sum_probs=31.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
+++|.|+| +|.+|+.++..|.+.|++|.+++| +++.
T Consensus 4 ~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r-~~~~ 39 (359)
T 1bg6_A 4 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDI-DAQR 39 (359)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH
T ss_pred cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeC-CHHH
Confidence 46899999 599999999999999999999998 5543
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00051 Score=56.74 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=49.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi 83 (243)
.++|+|+|| |.+|..+++.+...|++|+++++ ++...+.+..+.. -+.+ |..+. +..+++..++|+||
T Consensus 180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~-~~~~~~~~~~lGa-------~~v~--~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMGA-------DHYI--ATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC-------SEEE--EGGGTSCHHHHSCSCEEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHcCC-------CEEE--cCcCchHHHHHhhcCCCEEE
Confidence 578999999 99999999988888999999998 4443333332211 1222 33333 33333335799999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
.+++.
T Consensus 249 d~~g~ 253 (360)
T 1piw_A 249 VCASS 253 (360)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0021 Score=52.88 Aligned_cols=76 Identities=20% Similarity=0.089 Sum_probs=49.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC--CCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD--LNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--~~d~~~~~~~~~---- 77 (243)
..++|+|+|+ |.+|...++.+...|++|+++++ +++..+.+..+. .. ..+..+ -...+.+.+...
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lG------a~-~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTAR-SPRRLEVAKNCG------AD-VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHTT------CS-EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHhC------CC-EEEcCcccccHHHHHHHHhccccC
Confidence 3578999996 99999999988889999988888 554443333221 11 222221 122345555543
Q ss_pred -cccEEEEeeec
Q 026091 78 -GCTGVIHVAAP 88 (243)
Q Consensus 78 -~~d~vi~~a~~ 88 (243)
++|+||++++.
T Consensus 239 ~g~D~vid~~g~ 250 (352)
T 1e3j_A 239 DLPNVTIDCSGN 250 (352)
T ss_dssp SCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 59999999763
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0017 Score=52.98 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=29.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 39 (243)
.|+||.|+||||++|+.+++.|.+. .+++..+.+++
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 3579999999999999999999885 46888775534
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.003 Score=44.97 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=27.7
Q ss_pred CCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEE
Q 026091 5 KGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTV 36 (243)
Q Consensus 5 ~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~ 36 (243)
+++|.|+|++ |.+|..+++.|.+.|++|+.+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn 56 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN 56 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC
Confidence 6789999998 8999999999999999865443
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00022 Score=56.96 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=32.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
+++|.|+| +|.+|+.+++.|++.|++|++.+| +++.
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~-~~~~ 39 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDI-NTDA 39 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeC-CHHH
Confidence 57999999 699999999999999999999999 5543
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0015 Score=54.46 Aligned_cols=75 Identities=21% Similarity=0.207 Sum_probs=52.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC----------------CCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD----------------LNN 68 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~d 68 (243)
..+|+|+|+ |-+|...++.+...|++|++.+| ++...+....+ +..++..+ +++
T Consensus 190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~~--------G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDV-RPAAKEQVASL--------GAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-STTHHHHHHHT--------TCEECCCCC-----------------C
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHc--------CCceeecccccccccccccchhhhcch
Confidence 578999995 99999999999999999999999 55433333322 22333322 222
Q ss_pred ------hhhHHHHhccccEEEEeeecc
Q 026091 69 ------PESFDAAIAGCTGVIHVAAPI 89 (243)
Q Consensus 69 ------~~~~~~~~~~~d~vi~~a~~~ 89 (243)
.+.+.++++++|+||.++...
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlip 286 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIP 286 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence 257888889999999987543
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0014 Score=54.76 Aligned_cols=73 Identities=22% Similarity=0.155 Sum_probs=49.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC----------------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN---------------- 67 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---------------- 67 (243)
..++|+|+| +|.+|..+++.+...|.+|++.+| ++...+....+ +..++..|..
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~-~~~~~~~~~~~--------Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDV-RAATKEQVESL--------GGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHT--------TCEECCC-------------------
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeecccccccccccccchhhcC
Confidence 367999999 599999999999999999999998 44333232221 2222211211
Q ss_pred ------ChhhHHHHhccccEEEEee
Q 026091 68 ------NPESFDAAIAGCTGVIHVA 86 (243)
Q Consensus 68 ------d~~~~~~~~~~~d~vi~~a 86 (243)
..+.+.++++++|+||+++
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTA 265 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECC
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECC
Confidence 1234778888999999887
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00045 Score=56.56 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=55.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC---CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG---YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
|+||.|.||||++|+.+++.|.+++ .+++++..++.... ... . .+..+.+...| ++ .++++|+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~-~~~----~--~~~~i~~~~~~---~~----~~~~vDv 68 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK-TYR----F--NGKTVRVQNVE---EF----DWSQVHI 68 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC-EEE----E--TTEEEEEEEGG---GC----CGGGCSE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC-cee----e--cCceeEEecCC---hH----HhcCCCE
Confidence 5789999999999999999999873 46777764222111 110 0 01122332222 22 2358999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
|+-+.+.. .+......+.+.| + ++|-.|+.
T Consensus 69 Vf~a~g~~-----------------~s~~~a~~~~~~G-~-~vId~s~~ 98 (336)
T 2r00_A 69 ALFSAGGE-----------------LSAKWAPIAAEAG-V-VVIDNTSH 98 (336)
T ss_dssp EEECSCHH-----------------HHHHHHHHHHHTT-C-EEEECSST
T ss_pred EEECCCch-----------------HHHHHHHHHHHcC-C-EEEEcCCc
Confidence 99775431 1334555666778 4 67777775
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00039 Score=55.95 Aligned_cols=38 Identities=21% Similarity=0.349 Sum_probs=29.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
|.+||.++| .|.+|+.+++.|++.||+|++..| +++..
T Consensus 4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr-~~~~~ 41 (297)
T 4gbj_A 4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNR-TASKA 41 (297)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC--------
T ss_pred CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeC-CHHHH
Confidence 456899999 899999999999999999999999 55433
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.001 Score=53.73 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=54.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++++|+|++.-+|+.+++.|+..|.+|+++.|+..........+.. ..........++.+.+.+.++++|+||
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~-----~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL-----NKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC-----CCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh-----hcccccccccccHhHHHHHhccCCEEE
Confidence 568999999877899999999999999999998842221111111110 001111111134478999999999999
Q ss_pred EeeeccC
Q 026091 84 HVAAPID 90 (243)
Q Consensus 84 ~~a~~~~ 90 (243)
.+.+...
T Consensus 251 sAtg~p~ 257 (320)
T 1edz_A 251 TGVPSEN 257 (320)
T ss_dssp ECCCCTT
T ss_pred ECCCCCc
Confidence 8887643
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=54.24 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=27.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTV 36 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~ 36 (243)
+.||.|.||+|++|+.+++.|.+.. .++.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 5689999999999999999988764 5787776
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=54.17 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
++|+|+|+|+ |.+|..+++.+.+.|++|+++.. .+..... .. .-+.+..|..|.+.+.++++ ++|+
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~-~~~~~~~--~~--------ad~~~~~~~~d~~~l~~~~~~~~~d~ 85 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDR-YANAPAM--QV--------AHRSYVGNMMDKDFLWSVVEREKPDA 85 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEES-STTCHHH--HH--------SSEEEESCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC-CCCChhh--hh--------cceEEECCCCCHHHHHHHHHHcCCCE
Confidence 3579999995 88999999999999999999987 3322111 00 12456778889999888885 7899
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
|+...
T Consensus 86 V~~~~ 90 (433)
T 2dwc_A 86 IIPEI 90 (433)
T ss_dssp EEECS
T ss_pred EEECc
Confidence 87643
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0027 Score=52.65 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=48.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--ccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI--AGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 81 (243)
..++|+|+||+|.+|..+++.+...|++|+++.+ .. ..+.+ ..+ +.. ..+ |..+.+..+++. .++|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~-~~~~~---~~l---Ga~-~v~--~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD-ASELV---RKL---GAD-DVI--DYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GG-GHHHH---HHT---TCS-EEE--ETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hH-HHHHH---HHc---CCC-EEE--ECCchHHHHHHhhcCCCCE
Confidence 3578999999999999999999889999988774 32 22222 222 111 222 444433333333 36999
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||+++|.
T Consensus 252 vid~~g~ 258 (375)
T 2vn8_A 252 ILDNVGG 258 (375)
T ss_dssp EEESSCT
T ss_pred EEECCCC
Confidence 9999863
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0033 Score=48.95 Aligned_cols=155 Identities=12% Similarity=0.081 Sum_probs=88.2
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----ccc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----GCT 80 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d 80 (243)
||+|+|++|.+|+.+++.+.+. ++++.++..+.. .. ..+... +. =+..|.+.++...+.++ +.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~-dl---~~~~~~-----~~-DvvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD-PL---SLLTDG-----NT-EVVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC-CT---HHHHHT-----TC-CEEEECSCTTTHHHHHHHHHHTTCE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC-CH---HHHhcc-----CC-cEEEEccChHHHHHHHHHHHHcCCC
Confidence 7999999999999999998866 899988776332 11 111110 11 26678888877766553 578
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEEecceeeecCCC-----------CcccccCCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS-GTVKRVVYTSSASTVHFSGK-----------DVDMLDETFW 148 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~~~~~~~~-----------~~~~~~e~~~ 148 (243)
+|+-+.|. ++ +. ...+.++|++. + ..+++.+..+ .+.... ....+-|.+
T Consensus 72 ~VigTTG~------~~--e~-------~~~l~~aa~~~~~--~~vv~a~N~s-iGv~ll~~l~~~aa~~~~dieIiE~H- 132 (245)
T 1p9l_A 72 AVVGTTGF------TA--ER-------FQQVESWLVAKPN--TSVLIAPNFA-IGAVLSMHFAKQAARFFDSAEVIELH- 132 (245)
T ss_dssp EEECCCCC------CH--HH-------HHHHHHHHHTSTT--CEEEECSCCC-HHHHHHHHHHHHHGGGCSEEEEEEEE-
T ss_pred EEEcCCCC------CH--HH-------HHHHHHHHHhCCC--CCEEEECCcc-HHHHHHHHHHHHHHhhcCCEEEEECc-
Confidence 88855442 11 11 12455566655 4 3566665543 211100 001111211
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHH-------------------HcCccEEEEccCceeCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAE-------------------EHGLDLVTIIPSFVTGP 197 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-------------------~~gi~~~~~rp~~i~G~ 197 (243)
...+-..|-|.++..+|.+...... ..++.+..+|-|.+.|.
T Consensus 133 -------H~~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~ 193 (245)
T 1p9l_A 133 -------HPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAH 193 (245)
T ss_dssp -------CTTCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEE
T ss_pred -------ccCCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeE
Confidence 1112233467788888777543210 02688999999999886
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00084 Score=55.45 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=32.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
+++|.|+| .|.+|+.+++.|++.|++|.+.+| +++..
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr-~~~~~ 58 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDL-NVNAV 58 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHH
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-CHHHH
Confidence 46899999 899999999999999999999999 55433
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00086 Score=52.64 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=45.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+|++|.|+| +|.+|+.+++.|.+.|++|.+.+| +++....+.. .. ++. -..++.++++++|+||
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~--~~-----g~~-------~~~~~~~~~~~~D~Vi 65 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGS-SLERSKEIAE--QL-----ALP-------YAMSHQDLIDQVDLVI 65 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-SHHHHHHHHH--HH-----TCC-------BCSSHHHHHHTCSEEE
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECC-CHHHHHHHHH--Hc-----CCE-------eeCCHHHHHhcCCEEE
Confidence 356899999 899999999999999999998888 5543322221 00 111 1123455666788888
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
-+.
T Consensus 66 ~~v 68 (259)
T 2ahr_A 66 LGI 68 (259)
T ss_dssp ECS
T ss_pred EEe
Confidence 765
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00094 Score=54.14 Aligned_cols=37 Identities=24% Similarity=0.441 Sum_probs=32.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQ 42 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~ 42 (243)
++++|.|+| +|.+|..+++.|.+.|+ +|++.+| +++.
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr-~~~~ 70 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-NPES 70 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-CHHH
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEEC-CHHH
Confidence 347999999 89999999999999999 9999999 5543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00096 Score=54.29 Aligned_cols=72 Identities=21% Similarity=0.311 Sum_probs=45.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh--hhHHHHh-ccccEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP--ESFDAAI-AGCTGVI 83 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~-~~~d~vi 83 (243)
+|+|+||+|.+|...++.+...|++|+++++ +++..+.+..+. .. ..+ |..+. +.+.++. .++|+||
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~-~~~~~~~~~~lG------a~-~~i--~~~~~~~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLG------AK-EVL--AREDVMAERIRPLDKQRWAAAV 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CTTCHHHHHHTT------CS-EEE--ECC---------CCSCCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHcC------Cc-EEE--ecCCcHHHHHHHhcCCcccEEE
Confidence 7999999999999999999889999999998 443333333221 11 222 33332 2222222 2589999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
+++|.
T Consensus 222 d~~g~ 226 (328)
T 1xa0_A 222 DPVGG 226 (328)
T ss_dssp ECSTT
T ss_pred ECCcH
Confidence 99763
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00078 Score=52.45 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=26.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV 36 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~ 36 (243)
|+||.|+|+ |.+|+.+++.+.+.+.++.++.
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~ 33 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVI 33 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEE
Confidence 679999998 9999999999998877766643
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0019 Score=51.23 Aligned_cols=72 Identities=19% Similarity=0.242 Sum_probs=47.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..|+++|+|+ |.+|++++..|.+.|. +|++..| +.+....+.. .... ..+..+. +.+ +.. .++|+|
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R-~~~~a~~la~--~~~~--~~~~~~~--~~~---l~~--~~~Div 185 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANR-DMAKALALRN--ELDH--SRLRISR--YEA---LEG--QSFDIV 185 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHH--HHCC--TTEEEEC--SGG---GTT--CCCSEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHH--Hhcc--CCeeEee--HHH---hcc--cCCCEE
Confidence 4689999995 8999999999999995 9999999 5544333221 1111 1344432 222 211 678999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 186 InaTp~ 191 (272)
T 3pwz_A 186 VNATSA 191 (272)
T ss_dssp EECSSG
T ss_pred EECCCC
Confidence 998643
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00065 Score=54.47 Aligned_cols=65 Identities=25% Similarity=0.374 Sum_probs=43.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+++|.|+| +|.+|+.+++.|.+.|++|.+.+| +++..+.+. .. ++.. ..++.++++++|+||.
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-~~~~~~~~~---~~-----g~~~-------~~~~~~~~~~~D~vi~ 67 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPEAIADVI---AA-----GAET-------ASTAKAIAEQCDVIIT 67 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHH---HT-----TCEE-------CSSHHHHHHHCSEEEE
T ss_pred cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHH---HC-----CCee-------cCCHHHHHhCCCEEEE
Confidence 35899999 799999999999999999999888 554332222 11 2221 1234455666788776
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 68 ~v 69 (299)
T 1vpd_A 68 ML 69 (299)
T ss_dssp CC
T ss_pred EC
Confidence 64
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0018 Score=50.76 Aligned_cols=65 Identities=22% Similarity=0.355 Sum_probs=47.2
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+++|+| +|..|++++..|.+.|. +|++..| +.+..+.+. + .+... ..+++.+.++++|+||++
T Consensus 110 ~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR-~~~ka~~la---~------~~~~~-----~~~~~~~~~~~aDiVIna 173 (253)
T 3u62_A 110 PVVVVG-AGGAARAVIYALLQMGVKDIWVVNR-TIERAKALD---F------PVKIF-----SLDQLDEVVKKAKSLFNT 173 (253)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEES-CHHHHHTCC---S------SCEEE-----EGGGHHHHHHTCSEEEEC
T ss_pred eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHH---H------HcccC-----CHHHHHhhhcCCCEEEEC
Confidence 899999 59999999999999997 8999999 554332221 1 12211 234566778899999998
Q ss_pred ee
Q 026091 86 AA 87 (243)
Q Consensus 86 a~ 87 (243)
..
T Consensus 174 tp 175 (253)
T 3u62_A 174 TS 175 (253)
T ss_dssp SS
T ss_pred CC
Confidence 64
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00091 Score=52.17 Aligned_cols=36 Identities=33% Similarity=0.490 Sum_probs=31.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
.+++|.|+| +|.+|+++++.|++.|++|++.+| +++
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r-~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTR-DPK 53 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-Chh
Confidence 467999998 899999999999999999999999 554
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0021 Score=52.04 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=48.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|+| .|.||+.+++.|...|++|++.+| ++... ..+.... ...++.++++++|+|+
T Consensus 138 ~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr-~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~ 198 (315)
T 3pp8_A 138 EEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSR-SRKSW-------------PGVESYV----GREELRAFLNQTRVLI 198 (315)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEES-SCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcC-Cchhh-------------hhhhhhc----ccCCHHHHHhhCCEEE
Confidence 468999999 899999999999999999999998 43211 1222211 1267888999999987
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 199 l~~ 201 (315)
T 3pp8_A 199 NLL 201 (315)
T ss_dssp ECC
T ss_pred Eec
Confidence 664
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0031 Score=50.20 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=27.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (243)
++.||.|.||+|.+|+.+++.+.+. +.++.++.-
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd 54 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLV 54 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 3468999999999999999998765 577766643
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=55.80 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=47.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeE-EE---ecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ-IF---NADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~---~~D~~d~~~~~~~~~~~ 79 (243)
++++|.|+| +|++|..++..|++ |++|++.+| +++..+.+..-. .+.....++ .+ ...++-..++.++++++
T Consensus 35 ~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~-~~~~v~~l~~g~-~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 35 EFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDI-VQAKVDMLNQKI-SPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECS-CHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEec-CHHHhhHHhccC-CccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 456899999 79999999999987 999999999 654433332100 000000000 00 01111123455677889
Q ss_pred cEEEEee
Q 026091 80 TGVIHVA 86 (243)
Q Consensus 80 d~vi~~a 86 (243)
|+||-+.
T Consensus 111 DvViiaV 117 (432)
T 3pid_A 111 DYVIIAT 117 (432)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9988764
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0029 Score=52.24 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=50.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHH----Hhc-
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDA----AIA- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~----~~~- 77 (243)
..++|||+|| |.+|...++.+...|.+ |+++++ +++..+.+..+ . ..+.....|-.+.+.+.+ +..
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~-~~~~~~~a~~l-~-----~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDI-DEGRLKFAKEI-C-----PEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEES-CHHHHHHHHHH-C-----TTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHh-c-----hhcccccccccchHHHHHHHHHHhCC
Confidence 3578999997 99999999999889987 888888 66555454443 1 133333344334443333 332
Q ss_pred -cccEEEEeee
Q 026091 78 -GCTGVIHVAA 87 (243)
Q Consensus 78 -~~d~vi~~a~ 87 (243)
++|+|+.++|
T Consensus 251 ~g~Dvvid~~g 261 (363)
T 3m6i_A 251 IEPAVALECTG 261 (363)
T ss_dssp CCCSEEEECSC
T ss_pred CCCCEEEECCC
Confidence 5899999876
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.002 Score=45.92 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=29.2
Q ss_pred CCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+++|.|+|++ |.+|..+++.|.+.|++|+.+.+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp 48 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSP 48 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCC
Confidence 6789999998 89999999999999999776655
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00091 Score=53.29 Aligned_cols=71 Identities=14% Similarity=0.201 Sum_probs=46.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..|+++|+|+ |.+|++++..|.+.|. +|.+..| +.+....+. .+... ..+..+. +.+ +.+++|+
T Consensus 125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R-~~~~a~~la~~~~~~----~~~~~~~--~~~------l~~~aDi 190 (281)
T 3o8q_A 125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNR-TFAKAEQLAELVAAY----GEVKAQA--FEQ------LKQSYDV 190 (281)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEES-SHHHHHHHHHHHGGG----SCEEEEE--GGG------CCSCEEE
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEEC-CHHHHHHHHHHhhcc----CCeeEee--HHH------hcCCCCE
Confidence 4689999996 8899999999999995 9999999 554332222 22111 1234332 211 1267899
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||++...
T Consensus 191 IInaTp~ 197 (281)
T 3o8q_A 191 IINSTSA 197 (281)
T ss_dssp EEECSCC
T ss_pred EEEcCcC
Confidence 9998643
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00034 Score=57.79 Aligned_cols=26 Identities=31% Similarity=0.390 Sum_probs=23.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY 30 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~ 30 (243)
+.+|.|+||||++|..+++.|.+.++
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~ 27 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTL 27 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCC
Confidence 46899999999999999999988765
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0019 Score=45.78 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=28.1
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEE
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTV 36 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~ 36 (243)
++++|.|+|++ |.+|..+++.|.+.|++|+.+.
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn 47 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN 47 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC
Confidence 36789999998 8999999999999999855443
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0019 Score=54.12 Aligned_cols=74 Identities=23% Similarity=0.267 Sum_probs=50.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC-------------Ch--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN-------------NP-- 69 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------d~-- 69 (243)
.++|+|+| .|-+|..+++.+...|.+|++.+| ++....... .+ +.+++..|.. +.
T Consensus 172 g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~-~~~~~~~~~---~l-----Ga~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (401)
T 1x13_A 172 PAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDT-RPEVKEQVQ---SM-----GAEFLELDFKEEAGSGDGYAKVMSDAF 241 (401)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CGGGHHHHH---HT-----TCEECCC--------CCHHHHHHSHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHH---Hc-----CCEEEEecccccccccccchhhccHHH
Confidence 57999999 599999999999999999999998 554333322 22 3344333321 11
Q ss_pred -----hhHHHHhccccEEEEeeec
Q 026091 70 -----ESFDAAIAGCTGVIHVAAP 88 (243)
Q Consensus 70 -----~~~~~~~~~~d~vi~~a~~ 88 (243)
+.+.++++++|+||.++..
T Consensus 242 ~~~~~~~l~e~~~~aDvVI~~~~~ 265 (401)
T 1x13_A 242 IKAEMELFAAQAKEVDIIVTTALI 265 (401)
T ss_dssp HHHHHHHHHHHHHHCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCcc
Confidence 1467777889999998644
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0016 Score=53.67 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=50.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
...+|+|+|+ |.+|...++.+...|.+|+++++ +++..+.+. ..+ +.. .. .|..+.+.+.++..++|+||
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~-~~~~~~~~~--~~l---Ga~-~v--i~~~~~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISS-SNKKREEAL--QDL---GAD-DY--VIGSDQAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-STTHHHHHH--TTS---CCS-CE--EETTCHHHHHHSTTTEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHH--HHc---CCc-ee--eccccHHHHHHhcCCCCEEE
Confidence 3568999995 99999999988888999999998 443322221 011 111 12 24455566666666899999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
.+++.
T Consensus 250 d~~g~ 254 (357)
T 2cf5_A 250 DTVPV 254 (357)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 99874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 243 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 8e-32 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-25 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 8e-23 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-21 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-21 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 4e-21 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 7e-19 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-19 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 8e-19 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-18 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-16 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-14 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 2e-14 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 1e-13 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 6e-13 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 7e-13 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 7e-13 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 1e-11 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-11 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-11 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 1e-10 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-10 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 7e-09 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 6e-08 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 4e-07 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-07 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 1e-06 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 1e-06 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 3e-06 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 4e-06 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 9e-05 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 3e-04 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 4e-04 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 5e-04 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 5e-04 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 5e-04 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 8e-04 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 0.001 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 0.002 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.002 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 0.002 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 0.002 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.003 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 0.004 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 0.004 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 8e-32
Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 25/243 (10%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
+ R+ +TGG GF+GS L +L+ G+ V +KR++ N
Sbjct: 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE---------NF 51
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
+L N + + + H+A+P P + ++ GT+ +L + G
Sbjct: 52 ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIK-TLKTNTIGTLNMLGLAKRVG--A 108
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
R++ S++ +V E +W V+ I Y K +AE + ++
Sbjct: 109 RLLLASTSEVYG--DPEVHPQSEDYWGHVNPIGPRAC----YDEGKRVAETMCYAYMKQE 162
Query: 183 GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV----HIDDVARA 238
G+++ GP + G V + E ++ + S ++ D+
Sbjct: 163 GVEVRVARIFNTFGPRMHMND-GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 221
Query: 239 HIF 241
+
Sbjct: 222 LVA 224
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 100 bits (251), Expect = 1e-25
Identities = 40/251 (15%), Positives = 85/251 (33%), Gaps = 23/251 (9%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ +TGG GFIGS ++ ++ + + +L L+++ S R +AD+
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID-KLTYAGNLESLSDISE-SNRYNFEHADI 59
Query: 67 NNPESFDAAIAG--CTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSG--- 119
+ V+H+AA + P I+ + GT +L+ K
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAA-FIETNIVGTYALLEVARKYWSAL 118
Query: 120 -----TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERA 174
R + S+ V+ D ++ + + Y SK ++
Sbjct: 119 GEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 175 ALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV---- 230
+ +GL + S GP+ + + + + + +
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPY---HFPEKLIPLVILNALEGKPLPIYGKGDQIRDWL 234
Query: 231 HIDDVARAHIF 241
+++D ARA
Sbjct: 235 YVEDHARALHM 245
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 92.9 bits (230), Expect = 8e-23
Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 25/248 (10%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR--SDPEQKRDLSFLTNLPRASERLQIFNA 64
+TG TG GS+L LL+ GY V R S +R + + + +
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 65 DLNNPESFDAAIAGC--TGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGT 120
DL++ + + V ++ A + + PE GT+ +L++ G
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY-TADVDAMGTLRLLEAIRFLGL 121
Query: 121 --VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEF 178
R S++ + ET Y ++K A + +
Sbjct: 122 EKKTRFYQASTSEL--YGLVQEIPQKET-----TPFYPRSP----YAVAKLYAYWITVNY 170
Query: 179 AEEHGLDLVTIIPSFVTGPFI-CPQLAGSVRGTLAMVMGNREEYSMLLNI----SMVHID 233
E +G+ I P + + +A + E L N+ H
Sbjct: 171 RESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230
Query: 234 DVARAHIF 241
D +
Sbjct: 231 DYVKMQWM 238
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 89.2 bits (220), Expect = 1e-21
Identities = 28/197 (14%), Positives = 61/197 (30%), Gaps = 34/197 (17%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
K RV + G G +GS + +L G D
Sbjct: 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------EL 38
Query: 65 DLNNPESFDAAIAG--CTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGT 120
+L + + A V AA + I + + I+ + ++
Sbjct: 39 NLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND- 97
Query: 121 VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE 180
V ++++ S+ K E ++ + Y ++K + +
Sbjct: 98 VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP------YAIAKIAGIKLCESYNR 151
Query: 181 EHGLDLVTIIPSFVTGP 197
++G D +++P+ + GP
Sbjct: 152 QYGRDYRSVMPTNLYGP 168
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 89.5 bits (221), Expect = 1e-21
Identities = 50/244 (20%), Positives = 87/244 (35%), Gaps = 25/244 (10%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRT----TVRSDPEQKRDLSFLTNLPRASERLQIF 62
R+ VTGG GFIGS + +LL Y V + + L + A RL+
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFV 60
Query: 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPE-EVIIQRAVSGTIGILKSCLKSGTV 121
+ D+ + + G ++H AA + V + V GT +L+ + +G
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
RVV+ S+ + D E+ + + Y SK ++ A +
Sbjct: 120 GRVVHVSTNQV--YGSIDSGSWTESSPLEPNSP---------YAASKAGSDLVARAYHRT 168
Query: 182 HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV----HIDDVAR 237
+GLD+ GP+ Q + + + + + + V H DD R
Sbjct: 169 YGLDVRITRCCNNYGPY---QHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225
Query: 238 AHIF 241
Sbjct: 226 GIAL 229
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 87.9 bits (216), Expect = 4e-21
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 17/249 (6%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V VTG GF+ S ++ +LL+HGY VR T R + +L + D+
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
++D I G GV H+A+ + K E V GT+ L++ + +VKR V
Sbjct: 72 LKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIG--GTLNALRAAAATPSVKRFVL 129
Query: 127 TSSASTVHFSGKDVD---------MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
TSS + +V+ L+ + Y SKT AE AA +
Sbjct: 130 TSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWK 189
Query: 178 FAEEHGL--DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE---YSMLLNISMVHI 232
F +E+ L ++P++ G P+ M + N E +++ V
Sbjct: 190 FMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSA 249
Query: 233 DDVARAHIF 241
D+ H+
Sbjct: 250 VDIGLLHLG 258
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 81.9 bits (201), Expect = 7e-19
Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 16/194 (8%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ +TG GFI S + RL G+ V + E ++ + DL
Sbjct: 17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNE---------HMTEDMFCDEFHLVDL 67
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVS--GTIGILKSCLKSGTVKRV 124
E+ G V ++AA + G + + + ++++ +G +KR
Sbjct: 68 RVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRF 126
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
Y SSA + SD D + L K E + ++ G+
Sbjct: 127 FYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA----FGLEKLATEELCKHYNKDFGI 182
Query: 185 DLVTIIPSFVTGPF 198
+ + GPF
Sbjct: 183 ECRIGRFHNIYGPF 196
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 82.0 bits (201), Expect = 8e-19
Identities = 44/244 (18%), Positives = 79/244 (32%), Gaps = 17/244 (6%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+ VTGG GFIGS + + ++ V TV + + L + +R+++ D+
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDI 61
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVKRV 124
+ E D A ++H AA +P I GT +L++ K
Sbjct: 62 ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHT-NFIGTYTLLEAARKYDIRFHH 120
Query: 125 VYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGL 184
V T +D+ E + Y +K ++ + G+
Sbjct: 121 VSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS-PYSSTKAASDLIVKAWVRSFGV 179
Query: 185 DLVTIIPSFVTGP------FICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
S GP FI Q+ + G + G + +H +D +
Sbjct: 180 KATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV-----RDWIHTNDHSTG 234
Query: 239 HIFF 242
Sbjct: 235 VWAI 238
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.9 bits (201), Expect = 8e-19
Identities = 44/246 (17%), Positives = 66/246 (26%), Gaps = 24/246 (9%)
Query: 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVR-SDPEQKRDLSFLTNLPRA--SERLQIFNADL 66
+TG TG GS+L LL+ GY V VR S + L P+A +++ DL
Sbjct: 6 ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGK---EPEEVIIQRAVSGTIGILKSCLKSG--TV 121
+ I H K + E GT+ +L + G
Sbjct: 66 TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
+ S++ + ET Y +K A + F E
Sbjct: 126 VKFYQASTSEL--YGKVQEIPQKETTPFYPRSP---------YGAAKLYAYWIVVNFREA 174
Query: 182 HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN-----ISMVHIDDVA 236
+ L V I P + + L H D
Sbjct: 175 YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 234
Query: 237 RAHIFF 242
A
Sbjct: 235 EAMWLM 240
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 80.4 bits (197), Expect = 2e-18
Identities = 38/241 (15%), Positives = 66/241 (27%), Gaps = 22/241 (9%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
VTG TG G++L LL+ GY V V R + +Q + D+
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI---EGDIQYEDGDM 58
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVI---IQRAVSGTIGILKSCLKSGTVKR 123
+ S A+ G +L++ + R
Sbjct: 59 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 118
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
S++ F + DE Y ++K + + E G
Sbjct: 119 FYQASTS--EMFGLIQAERQDENTPFY---------PRSPYGVAKLYGHWITVNYRESFG 167
Query: 184 LDLVTIIPSFVTGPFICPQLAGS-VRGTLAMVMGNREEYSMLLNIS----MVHIDDVARA 238
L + I P + V +A + +++ L N+ D A
Sbjct: 168 LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA 227
Query: 239 H 239
Sbjct: 228 M 228
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 73.5 bits (179), Expect = 8e-16
Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 37/259 (14%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
RV VTGG+G+IGS ++LL +G+ V ++ L + L + D+
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDI 59
Query: 67 NNPESFDAAIA--GCTGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
N + VIH A + ++P E V+GT+ ++ + + VK
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLE-YYDNNVNGTLRLISAMRAAN-VK 117
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH 182
+++SSA+ + Y SK + E+ + +
Sbjct: 118 NFIFSSSATVYG----------DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ 167
Query: 183 GLDLVTII-PSFVTGPFICPQLAGSVRGTLAMVM--------GNREEYSMLLNISM---- 229
+ ++ G + +G +M G R+ ++ N
Sbjct: 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227
Query: 230 ------VHIDDVARAHIFF 242
+H+ D+A H+
Sbjct: 228 TGVRDYIHVMDLADGHVVA 246
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 69.4 bits (168), Expect = 2e-14
Identities = 35/242 (14%), Positives = 69/242 (28%), Gaps = 42/242 (17%)
Query: 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR----SDPEQKRDLSFLTNLPRASER 58
++K RV + GGTG+IG ++ + G+ R S+ ++ + L + L
Sbjct: 1 DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----G 55
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
++ A L++ + A+ VI A + E++ + A+ K
Sbjct: 56 AKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAI-----------KE 104
Query: 119 GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEF 178
+ S + + D +R+
Sbjct: 105 AGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEA------------------ 146
Query: 179 AEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARA 238
+ + + G F LA + + V DDV
Sbjct: 147 ---ASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202
Query: 239 HI 240
I
Sbjct: 203 TI 204
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 69.3 bits (168), Expect = 2e-14
Identities = 33/203 (16%), Positives = 57/203 (28%), Gaps = 8/203 (3%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE---QKRDLSFLTNLPRASERLQI 61
+ +TG TG GS+L LL GY V +R Q+ + ++ +++
Sbjct: 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60
Query: 62 FNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV 121
ADL + S I H E+ A G L++
Sbjct: 61 HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGA-LRLLEAVRS 119
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE 181
+ + ++ S+ + SK A + + E
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA----SKCAAHWYTVNYREA 175
Query: 182 HGLDLVTIIPSFVTGPFICPQLA 204
+GL I P
Sbjct: 176 YGLFACNGILFNHESPRRGENFV 198
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 67.0 bits (162), Expect = 1e-13
Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 16/151 (10%)
Query: 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF 62
++K + V G TG G+ LI G+ VR V + +A + +F
Sbjct: 1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLIAEEL-----QAIPNVTLF 54
Query: 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVK 122
L N + + + + + A ++GT++
Sbjct: 55 QGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADA----------AKRAGTIQ 104
Query: 123 RVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153
+Y+S + + ++ +Y
Sbjct: 105 HYIYSSMPDHSLYGPWPAVPMWAPKFTVENY 135
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 65.1 bits (157), Expect = 6e-13
Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 10/157 (6%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR-SDPEQKRDLSFLTNLPRASERLQIFNAD 65
++ +TGG GF+GS L L G + S +L +L++L + + D
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG----NFEFVHGD 57
Query: 66 LNNPESFDAAIAGC--TGVIHVAAPIDIHG--KEPEEVIIQRAVSGTIGILKSCLKSGTV 121
+ N I H+A + + P + V GT+ +L++ + +
Sbjct: 58 IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCM-DFEINVGGTLNLLEAVRQYNSN 116
Query: 122 KRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158
++Y+S+ + ET ++ VD D
Sbjct: 117 CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 153
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 65.1 bits (157), Expect = 7e-13
Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 11/185 (5%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67
V VTGG G+IGS ++ L+++GY ++ L L + + + DL
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLC 61
Query: 68 NPESFDAAIA--GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVV 125
+ + + VIH A + + +L ++ V + V
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121
Query: 126 YTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLD 185
++SSA+ + + +M+ + Y +K E +
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPT-------NPYGHTKYAIENILNDLYNSDKKS 174
Query: 186 LVTII 190
I
Sbjct: 175 WKFAI 179
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.1 bits (152), Expect = 7e-13
Identities = 32/234 (13%), Positives = 62/234 (26%), Gaps = 52/234 (22%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
++ + G TG G + + + GY V VR + + D+
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR---------PAHVVVGDV 55
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
D +AG VI + + R + + +K+ V +VV
Sbjct: 56 LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNI-------VAAMKAHGVDKVVA 108
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
+SA + K L + E GL
Sbjct: 109 CTSAFLLWDPTKVPPRLQAVTDDH----------------------IRMHKVLRESGLKY 146
Query: 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
V ++P + + G + + R ++ D+ +
Sbjct: 147 VAVMPPHIGD--------QPLTGAYTVTLDGRGP------SRVISKHDLGHFML 186
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 61.0 bits (146), Expect = 1e-11
Identities = 18/102 (17%), Positives = 34/102 (33%)
Query: 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNA 64
+ R+ + G TG+IG + LD G+ VR + I +
Sbjct: 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62
Query: 65 DLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVS 106
+++ S A+ VI + I + I+ +
Sbjct: 63 SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGT 104
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 60.4 bits (145), Expect = 2e-11
Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 15/204 (7%)
Query: 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNL--PRASER 58
+ + +TG GFIGS L+ LL V +R+L + +L +
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71
Query: 59 LQIFNADLNNPESFDAAIAGCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLK 117
+ D+ N + + A AG V+H AA + + G + +L +
Sbjct: 72 FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 118 SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALE 177
+ S S+ + + +++T + Y ++K + E A
Sbjct: 132 AKVQSFTYAAS--SSTYGDHPGLPKVEDTIGKPLS----------PYAVTKYVNELYADV 179
Query: 178 FAEEHGLDLVTIIPSFVTGPFICP 201
F+ +G + + V G P
Sbjct: 180 FSRCYGFSTIGLRYFNVFGRRQDP 203
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 58.7 bits (140), Expect = 5e-11
Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 26/234 (11%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
V VTG +G G + +L + Q + +F D+
Sbjct: 5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--------KEKIGGEADVFIGDI 56
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126
+ +S + A G ++ + + + + G + + G V
Sbjct: 57 TDADSINPAFQGIDALVILTSAVPKMKPGFDPT--------KGGRPEFIFEDGQYPEQVD 108
Query: 127 TSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDL 186
+ K + + K + + +R A ++ + G
Sbjct: 109 WIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY 168
Query: 187 VTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240
I + G + ++ +++ + + V DVA I
Sbjct: 169 TIIRAGGLLDK----------EGGVRELLVGKDDELLQTDTKTVPRADVAEVCI 212
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 58.3 bits (139), Expect = 1e-10
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
RV VTG TGF G WL + L G +V+ + P R ++ +Q D+
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF----ETARVADGMQSEIGDI 65
Query: 67 NNPESFDAAIAGCTGVIHVAAPIDIH 92
+ +I I
Sbjct: 66 RDQNKLLESIREFQPEIVFHMAAQPL 91
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 2e-10
Identities = 33/217 (15%), Positives = 64/217 (29%), Gaps = 19/217 (8%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASE----RLQIF 62
+V VTGG G+IGS ++ LL+ GY + S +L R E ++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 63 NADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEE---VIIQRAVSGTIGILKSCLKSG 119
D+ + + + + + E + + ++GTI +L+ G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 120 TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFA 179
+ + +D Y SK E +
Sbjct: 124 V-----------KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC 172
Query: 180 EEHGLDLVTII-PSFVTGPFICPQLAGSVRGTLAMVM 215
+ ++ TG + +G +M
Sbjct: 173 QADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLM 209
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.1 bits (125), Expect = 7e-09
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVR---TTVRSDPEQKRDLSFLTNLPRASERL---- 59
RV V GG G+ G + L Y V VR + + L LT + +R+
Sbjct: 3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62
Query: 60 -------QIFNADLNNPESFDAAIAGC 79
+++ D+ + E +
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKSF 89
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 50.3 bits (118), Expect = 6e-08
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 7/70 (10%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
RV + G GFIG+ L RLL + + + D+
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDI 54
Query: 67 NNPESFDAAI 76
+ +
Sbjct: 55 SIHSEWIEYH 64
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.1 bits (110), Expect = 4e-07
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38
RV + G TG G L+ R+L + +
Sbjct: 4 RVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 35
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 47.1 bits (110), Expect = 7e-07
Identities = 48/282 (17%), Positives = 80/282 (28%), Gaps = 48/282 (17%)
Query: 7 RVCVTGGTGFIGSWLIMRLL-DHGYSV--------------RTTVRSDPEQKRDLSFLTN 51
RV V GG G+IGS + LL D +SV R + +K S
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63
Query: 52 LPRASERLQIFNADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGI 111
P A + D+ N + + + V + +
Sbjct: 64 PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 112 LKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLA 171
+ L++ + + +S+ G T +D K Y SK +A
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKS-PESPYGESKLIA 182
Query: 172 ERAALEFAEEHGLDLVTIIPSFVTGPFICP----------------------QLAGSVRG 209
ER + AE +G+ + + G +A R
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 210 TLAMVMGNREEYSMLLNI----------SMVHIDDVARAHIF 241
T+ + + VH+ D+A AHI
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHIL 284
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 46.4 bits (108), Expect = 1e-06
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39
++ +TG G +G + +L V T D
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 45.7 bits (106), Expect = 1e-06
Identities = 13/73 (17%), Positives = 20/73 (27%), Gaps = 21/73 (28%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL 66
+ + G TG +G L L G + V S F D
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE---------------------FCGDF 40
Query: 67 NNPESFDAAIAGC 79
+NP+ +
Sbjct: 41 SNPKGVAETVRKL 53
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 44.7 bits (105), Expect = 3e-06
Identities = 33/242 (13%), Positives = 73/242 (30%), Gaps = 11/242 (4%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+G+V VTG IG + M L G V + E ++ + + +
Sbjct: 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV--VAAIKKNGSDAACVK 74
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR 123
A++ E + + +DI V T + +
Sbjct: 75 ANVGVVEDIVRMFE---EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVF-TINTRG 130
Query: 124 VVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHG 183
+ + + H +L + + K ++ S +T A A++ A +
Sbjct: 131 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKK 189
Query: 184 LDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHI---DDVARAHI 240
+ + + P + + + +EY+ + + + D+AR
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 249
Query: 241 FF 242
F
Sbjct: 250 FL 251
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 44.6 bits (103), Expect = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTV 36
+ VTGG GFIGS ++ L D G + V
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVV 30
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (97), Expect = 2e-05
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38
V + G +G G L+ +L+ G + T+
Sbjct: 16 SVFILGASGETGRVLLKEILEQGLFSKVTLIG 47
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 40.4 bits (94), Expect = 9e-05
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
G+ +TG + IG + G V T R++ + + +E++
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62
Query: 64 ADLNNPESFDAAIA 77
AD+ D I
Sbjct: 63 ADVTEASGQDDIIN 76
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.8 bits (90), Expect = 3e-04
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+ +TG + IG + G +V T RS + + + +++
Sbjct: 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63
Query: 64 ADLNNPESFDAAIA 77
AD+ + D I
Sbjct: 64 ADVTTEDGQDQIIN 77
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (89), Expect = 4e-04
Identities = 39/248 (15%), Positives = 74/248 (29%), Gaps = 28/248 (11%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN--LPRASERLQI 61
+G+V VTGG IG ++ LL+ G +V R K L P R+
Sbjct: 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70
Query: 62 FNADLNNPESFDAAIAGCT---GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS 118
++ N E + + G I+ ++ G + + G +L++ L
Sbjct: 71 IQCNIRNEEEVNNLVKSTLDTFGKINFL--VNNGGGQFLSPAEHISSKGWHAVLETNLTG 128
Query: 119 GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEF 178
Y A + + + G + L + ALE+
Sbjct: 129 -----TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 183
Query: 179 AEEHGLDLVTIIPSFVTGPFICPQLAGS----VRGTLAMVMGNREEYSMLLNISMVHIDD 234
A G+ + + P + G+ + R + ++
Sbjct: 184 A-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR----------IGVPEE 232
Query: 235 VARAHIFF 242
V+ F
Sbjct: 233 VSSVVCFL 240
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 38.1 bits (88), Expect = 5e-04
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+G VTGG+ IG ++ L G SV T R+ E LT +++
Sbjct: 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND---CLTQWRSKGFKVEASV 63
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDIH 92
DL++ + H ++I
Sbjct: 64 CDLSSRSERQELMNTV--ANHFHGKLNIL 90
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.0 bits (88), Expect = 5e-04
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+V +TG + IG + G V T R + + + + +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 64 ADLNNPESFDAAIA 77
AD+ D ++
Sbjct: 64 ADVTTDAGQDEILS 77
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (88), Expect = 5e-04
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 1 MEEEKGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERL 59
ME + R+ VTG +G IG+ + L+ G V R+ + + + L
Sbjct: 5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTL 63
Query: 60 QIFNADLNNPESFDAAIA 77
+ DL+N E + +
Sbjct: 64 IPYRCDLSNEEDILSMFS 81
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 37.3 bits (86), Expect = 8e-04
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 16/122 (13%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
G VTG IG + L G V R++ + L +L + ++
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD-------LVSLAKECPGIEPVC 56
Query: 64 ADLNNPESFDAAIAGCTGV--------IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSC 115
DL + ++ + A+ G V + + P KE + + + +
Sbjct: 57 VDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 116
Query: 116 LK 117
+
Sbjct: 117 AR 118
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 37.0 bits (85), Expect = 0.001
Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 35/254 (13%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
G+V TG IG + + L G SV S + ++ + L + +
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV--VAELKKLGAQGVAIQ 62
Query: 64 ADLNNPESFDAAIAGCT---GVIHVA---------APIDIHGKEPEEVIIQRAVSGTIGI 111
AD++ P A G + +E + + G +
Sbjct: 63 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122
Query: 112 LKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLA 171
+ LK + +S+ +G + K + G +
Sbjct: 123 AQQGLKHCRRGGRIILTSSIAAVMTG--------IPNHALYAGSKAAVEGFCRAFAVDCG 174
Query: 172 ERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVH 231
G+ + I P V G + + + + +
Sbjct: 175 ---------AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKR 225
Query: 232 I---DDVARAHIFF 242
I D+ RA
Sbjct: 226 IGYPADIGRAVSAL 239
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.1 bits (83), Expect = 0.002
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
GR VTG IG + L G V R+ + L +L R ++
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-------LDSLVRECPGIEPVC 58
Query: 64 ADLNNPESFDAAIA 77
DL + E+ + A+
Sbjct: 59 VDLGDWEATERALG 72
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.1 bits (83), Expect = 0.002
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
K + VTGGT IG ++ G + T R++ E LS + ++
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLS---KWQKKGFQVTGSV 63
Query: 64 ADLNNPESFDAAIAGCTGVIHVAAPIDI 91
D + + + +DI
Sbjct: 64 CDASLRPEREKLMQTV--SSMFGGKLDI 89
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 36.0 bits (83), Expect = 0.002
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 6/74 (8%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
K ++ +TGG IG + R G + + + R+
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA-----IRNLGRRVLTVK 58
Query: 64 ADLNNPESFDAAIA 77
D++ P +A
Sbjct: 59 CDVSQPGDVEAFGK 72
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 36.2 bits (83), Expect = 0.002
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+ +V +TGG G IG + +G V +D ++ + N + + + +
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK----VCNNIGSPDVISFVH 60
Query: 64 ADLNNPESFDAAIAGC 79
D+ E +
Sbjct: 61 CDVTKDEDVRNLVDTT 76
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 35.8 bits (82), Expect = 0.003
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+ VTGG IG + G +V RS + + + + +
Sbjct: 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK--EFGVKTKAYQ 65
Query: 64 ADLNNPESFDAAIA 77
D++N + I
Sbjct: 66 CDVSNTDIVTKTIQ 79
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 35.2 bits (80), Expect = 0.004
Identities = 27/211 (12%), Positives = 57/211 (27%), Gaps = 27/211 (12%)
Query: 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRA-SERLQIF 62
G V VTG IG L+ +L+ + RD+ T L R+ +
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA-----RDVEKATELKSIKDSRVHVL 56
Query: 63 NADLNNPESFDAAIAG---------------CTGVIHVAAPIDIHGKEPEEVIIQRAVSG 107
+ +S D ++ GV+ + + +
Sbjct: 57 PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116
Query: 108 TIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLS 167
+ + + L S + + + +Y++S
Sbjct: 117 VVLLTQKLLP-LLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175
Query: 168 KT----LAERAALEFAEEHGLDLVTIIPSFV 194
K A++ + + +V P +V
Sbjct: 176 KAAINMFGRTLAVDLK-DDNVLVVNFCPGWV 205
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 35.5 bits (81), Expect = 0.004
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
+G+V +TG + +G + +R V RS ++ + L + +
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVGGEAIAVK 63
Query: 64 ADLNNPESFDAAIA 77
D+ +
Sbjct: 64 GDVTVESDVINLVQ 77
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 35.5 bits (81), Expect = 0.004
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 5 KGRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN 63
KG VTGG+ IG ++ L G V T R++ E L ++
Sbjct: 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE---CLEIWREKGLNVEGSV 61
Query: 64 ADLNNPESFDAAIA 77
DL + D +
Sbjct: 62 CDLLSRTERDKLMQ 75
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 243 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.98 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.97 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.97 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.95 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.94 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.94 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.94 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.94 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.94 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.94 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.94 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.94 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.94 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.93 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.93 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.93 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.93 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.93 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.93 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.93 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.93 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.93 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.93 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.93 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.93 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.93 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.93 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.93 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.93 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.92 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.92 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.92 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.92 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.92 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.92 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.92 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.92 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.92 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.92 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.91 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.91 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.91 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.91 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.91 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.91 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.91 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.91 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.9 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.9 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.9 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.9 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.9 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.9 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.9 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.89 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.88 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.88 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.88 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.88 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.88 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.87 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.87 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.85 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.85 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.84 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.84 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.84 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.83 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.82 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.82 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.8 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.8 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.78 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.77 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.75 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.73 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.7 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.4 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.7 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.67 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.57 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.56 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.53 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 98.52 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 98.48 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.46 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.45 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.44 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.42 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 98.38 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 98.37 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.33 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 98.22 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 98.2 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.19 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 98.18 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.13 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 98.13 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.12 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 98.05 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.0 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.98 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.98 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.96 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.93 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.92 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.91 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.9 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.89 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.89 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.88 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.88 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.87 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.79 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.79 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.76 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.74 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.71 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.71 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.68 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.66 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.66 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.65 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.65 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.63 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.62 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.57 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.55 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.52 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.48 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.47 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.45 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.44 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.42 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.42 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.38 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.37 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.34 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.28 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.26 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.26 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.17 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.16 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.15 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.13 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.1 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.08 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.07 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.0 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.99 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.94 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.93 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.93 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.92 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.92 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.88 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.87 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.87 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.86 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.86 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.85 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.84 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.83 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.8 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.79 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.77 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.76 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.73 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.72 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.67 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.65 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.63 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.62 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.55 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.54 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.53 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.48 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.46 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.45 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.44 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.43 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.43 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.4 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.4 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.4 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.37 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.34 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.33 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 96.29 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 96.25 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.25 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.24 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.24 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.23 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.21 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.19 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.13 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.13 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.09 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.05 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.04 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 96.04 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.92 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.91 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 95.88 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.85 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.84 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.8 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.78 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.77 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.76 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.72 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.71 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.71 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.52 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.49 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 95.39 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.36 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.28 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.25 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.08 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.02 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.97 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.93 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.8 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.8 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 94.79 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 94.78 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.72 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.69 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.66 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.58 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.47 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 94.44 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 94.41 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.4 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 94.34 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 94.26 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.26 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 94.21 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 94.21 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 94.18 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 94.11 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.07 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.97 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.88 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.87 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.8 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.78 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 93.75 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 93.67 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.62 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.62 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 93.56 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 93.46 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 93.42 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.36 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 93.35 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 93.35 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 93.34 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 93.33 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 93.29 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 92.98 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 92.57 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 92.51 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.23 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 92.07 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.91 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 91.85 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 91.85 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 91.79 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 91.76 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 91.54 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 91.51 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 91.45 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 91.45 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 91.39 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 91.38 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 91.36 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 91.27 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 91.11 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 91.1 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 91.03 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 90.93 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.76 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 90.57 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 89.98 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 89.82 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 89.8 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 89.67 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 89.62 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 89.37 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 89.35 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 89.27 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 88.97 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 88.64 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.6 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 88.52 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.41 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 88.32 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 87.83 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 87.75 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 87.63 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 87.61 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.45 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 87.33 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 87.14 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 86.98 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 86.82 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 86.67 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 86.43 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 86.34 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 86.28 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 86.24 | |
| d1p3y1_ | 183 | MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | 86.07 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 85.37 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 85.37 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 85.19 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 84.96 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 84.66 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 84.51 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 84.38 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 84.11 | |
| d2at2a2 | 151 | Aspartate carbamoyltransferase catalytic subunit { | 83.76 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 83.74 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 83.43 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 83.23 | |
| d1neka2 | 330 | Succinate dehydogenase {Escherichia coli [TaxId: 5 | 83.14 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 82.46 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 82.38 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 82.15 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 82.15 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 82.06 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 82.06 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 81.92 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 81.83 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 81.29 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 81.29 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 80.95 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 80.94 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 80.88 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 80.72 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 80.61 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 80.4 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 80.25 | |
| d1c9ka_ | 180 | Adenosylcobinamide kinase/adenosylcobinamide phosp | 80.2 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 80.06 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 80.05 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.9e-39 Score=265.91 Aligned_cols=227 Identities=17% Similarity=0.141 Sum_probs=168.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
|++||||||||||++|+++|+++|++|++++|.... ....+..+.. ......+++++++|++|.+.+.+++++ +|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 789999999999999999999999999999994321 1122222221 122355899999999999999999985 599
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLD 158 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 158 (243)
|+|+|+..+. ...++....+++|+.+|.+|+++|++.+ +.++|||+||+++|+.. ...+++|+++..
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~--~~~~~~E~~~~~-------- 151 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLV--QEIPQKETTPFY-------- 151 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTC--CSSSBCTTSCCC--------
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCC--CCCCcCCCCCCC--------
Confidence 9999998654 2233345899999999999999999875 24479999999876432 345788887543
Q ss_pred CCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHHHHHHHHhcCccccc---cccCcCceeHH
Q 026091 159 IWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMVMGNREEYS---MLLNISMVHID 233 (243)
Q Consensus 159 ~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~ 233 (243)
|.++|+.+|.++|.+++.++++++++++++||+++|||+...... .....+.....+....+. +++.++++|++
T Consensus 152 -P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~ 230 (357)
T d1db3a_ 152 -PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (357)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeec
Confidence 567899999999999999999999999999999999997543321 222333334444443322 36788999999
Q ss_pred HHHHhhhccC
Q 026091 234 DVARAHIFFT 243 (243)
Q Consensus 234 Dva~a~~~~~ 243 (243)
|+|++++.++
T Consensus 231 D~~~a~~~~~ 240 (357)
T d1db3a_ 231 DYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHTT
T ss_pred hHHHHHHHHH
Confidence 9999998763
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-38 Score=259.17 Aligned_cols=221 Identities=19% Similarity=0.263 Sum_probs=164.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+|||||||||||||++++++|+++|++|++++|.............. ...+.....|+ +..++.++|+|||
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~-----~~~~~~~~d~Vih 71 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDV-----VEPLYIEVDQIYH 71 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCT-----TSCCCCCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC----CCceEEEehHH-----HHHHHcCCCEEEE
Confidence 47999999999999999999999999999998743332222221111 22344444444 4445668999999
Q ss_pred eeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCch
Q 026091 85 VAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKS 163 (243)
Q Consensus 85 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 163 (243)
+|+.... .+..+....+++|+.++.+++++|++.+ + ++||+||+++|+.. ...+++|+.+...+. ..|.++
T Consensus 72 lAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~--~~~~~~e~~~~~~~~----~~p~~~ 143 (312)
T d2b69a1 72 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVNP----IGPRAC 143 (312)
T ss_dssp CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCCS----SSTTHH
T ss_pred CcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCC--CCCCCCccccCCCCC----CCCccH
Confidence 9997553 2223345889999999999999999998 5 89999999887643 334566655433221 125678
Q ss_pred HHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHH-HHHHhcCcccccc--ccCcCceeHHHHHHhhh
Q 026091 164 YKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGT-LAMVMGNREEYSM--LLNISMVHIDDVARAHI 240 (243)
Q Consensus 164 y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~ 240 (243)
|+.+|.++|.+++.+++.+|++++++||+++|||+.......++..+ .+...+++..+.+ .+.++++|++|++++++
T Consensus 144 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~ 223 (312)
T d2b69a1 144 YDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV 223 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHH
Confidence 99999999999999999999999999999999998766544555444 4555666665543 66889999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 224 ~~ 225 (312)
T d2b69a1 224 AL 225 (312)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.7e-36 Score=249.91 Aligned_cols=227 Identities=20% Similarity=0.168 Sum_probs=177.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcC--CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNL--PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|||||||||||++|+++|++.|++|++++|...........+... .....+++++.+|+.|...+.....+.+.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 5789999999999999999999999999999987433222222222111 01134789999999999999999999999
Q ss_pred EEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|+|+++.... .+..+....+++|+.++.+++++|++.+ +++|||+||.++|+.. ...+++|+++.. |
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~~---------p 162 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIGK---------P 162 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCCC---------C
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCC--CCCCccCCCCCC---------C
Confidence 9999986543 1223345889999999999999999999 9999999999987544 345678887654 5
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHH-HHHHhcCcccccc--ccCcCceeHHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGT-LAMVMGNREEYSM--LLNISMVHIDDV 235 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~-~~~~~~~~~~~~~--~~~~~~i~v~Dv 235 (243)
.+.|+.+|.++|.+++.+++.++++++++||+++||++..+.. ..++..+ .....+++..+.+ .+.++|+|++|+
T Consensus 163 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~ 242 (341)
T d1sb8a_ 163 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242 (341)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEecc
Confidence 6789999999999999999999999999999999999766443 3445444 3455666655543 678999999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
|.++..+
T Consensus 243 ~~a~~~~ 249 (341)
T d1sb8a_ 243 VQANLLA 249 (341)
T ss_dssp HHHHHHH
T ss_pred chhhhhh
Confidence 9997653
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4.6e-36 Score=249.14 Aligned_cols=230 Identities=18% Similarity=0.155 Sum_probs=166.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|||||||||||||++|+++|++.|++|++..++.... .....+... ....+++++++|++|...+.++++ ++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA-GNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT-CCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-ccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 3799999999999999999999999866655422211 112222221 124589999999999999999987 489999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEEecceeeecCCCCcccccCCCCCch-h
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSG--------TVKRVVYTSSASTVHFSGKDVDMLDETFWSDV-D 152 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~-~ 152 (243)
|+||.... ...++ ...+++|+.++.+++++|++.+ ++++|||+||.++|+.... .+..|.....+ .
T Consensus 79 hlAa~~~~~~~~~~p-~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~~~~~~~~ 155 (361)
T d1kewa_ 79 HLAAESHVDRSITGP-AAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPH--PDEVENSVTLPLF 155 (361)
T ss_dssp ECCSCCCHHHHHHCT-HHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCC--GGGSCTTSCCCCB
T ss_pred ECccccchhhHHhCH-HHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCcc--CCccccccCCCCc
Confidence 99997553 12244 4789999999999999998864 1458999999998865532 11111111110 0
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccc--cccCcCc
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYS--MLLNISM 229 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~ 229 (243)
.......|.++|+.+|.++|.+++.++++++++++++||+++|||+... ..++..+. +...+++..+. +++.|+|
T Consensus 156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~~v~g~g~~~r~~ 233 (361)
T d1kewa_ 156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRDW 233 (361)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCcEEeCCCCeEEeC
Confidence 0011123678899999999999999999999999999999999997543 23444444 44556655443 3678999
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|+++..+
T Consensus 234 i~v~D~a~ai~~~ 246 (361)
T d1kewa_ 234 LYVEDHARALHMV 246 (361)
T ss_dssp EEHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHH
Confidence 9999999998765
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.3e-36 Score=245.92 Aligned_cols=232 Identities=17% Similarity=0.118 Sum_probs=168.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||+|||||||||||++|+++|+++|++|.+++++..........+... ...+++++.+|++|.+.+.+++++++.|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence 689999999999999999999999998887777433222222222111 246899999999999999999999999999
Q ss_pred eeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC-cccccCCCCCchhhhhhcCCCC
Q 026091 85 VAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD-VDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 85 ~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
+|+.... ...++ .+.+++|+.++.+++++++..+ .++|++||+++|+..+.. ..+..+..+...........|.
T Consensus 80 ~a~~~~~~~~~~~~-~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~ 156 (346)
T d1oc2a_ 80 YAAESHNDNSLNDP-SPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 156 (346)
T ss_dssp CCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred hhhcccccchhhCc-ccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCCC
Confidence 9987554 22344 4889999999999999999999 589999999887543221 0111111110000001112356
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAH 239 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~ 239 (243)
+.|+.+|.++|.+++.++++++++++++||+++|||..... ......+.....+.+.... +.+.++++|++|+|+++
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 78999999999999999999999999999999999864332 1223334445555555444 37789999999999998
Q ss_pred hcc
Q 026091 240 IFF 242 (243)
Q Consensus 240 ~~~ 242 (243)
+.+
T Consensus 236 ~~~ 238 (346)
T d1oc2a_ 236 WAI 238 (346)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.2e-36 Score=247.36 Aligned_cols=218 Identities=23% Similarity=0.292 Sum_probs=168.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEE------EEeCC-chhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRT------TVRSD-PEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~------~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
|||||||||||||+++++.|+++|++|.+ +.+.. ......+..+ ....+++++.+|+.+.........+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~ 76 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV----DADPRLRFVHGDIRDAGLLARELRG 76 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG----TTCTTEEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh----hcCCCeEEEEeccccchhhhccccc
Confidence 37999999999999999999999986544 33211 1111111111 1245899999999999999999999
Q ss_pred ccEEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 79 CTGVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 79 ~d~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
+|.|+|+|+.... ...++ .+.+++|+.++.+++++|++.+ +++|||+||+++|+.. ...+++|+++..
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~--~~~~~~E~~~~~------ 146 (322)
T d1r6da_ 77 VDAIVHFAAESHVDRSIAGA-SVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSI--DSGSWTESSPLE------ 146 (322)
T ss_dssp CCEEEECCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCC--SSSCBCTTSCCC------
T ss_pred cceEEeecccccccccccch-HHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCC--CCCCCCCCCCCC------
Confidence 9999999976543 12233 4788999999999999999999 9999999999987655 345678877643
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccc--cccCcCceeHH
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYS--MLLNISMVHID 233 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~v~ 233 (243)
|.++|+.+|.++|.+++.++++++++++++||+.+|||+.... .++..+. ....+++..+. +.+.|+|+|++
T Consensus 147 ---p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~ 221 (322)
T d1r6da_ 147 ---PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTD 221 (322)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence 5678999999999999999999999999999999999975432 4455544 44455555543 36789999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+|++++.+
T Consensus 222 D~a~ai~~~ 230 (322)
T d1r6da_ 222 DHCRGIALV 230 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998865
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-36 Score=245.59 Aligned_cols=226 Identities=19% Similarity=0.139 Sum_probs=165.8
Q ss_pred CeE-EEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhcC--CCCCCCeEEEecCCCChhhHHHHhcc--c
Q 026091 6 GRV-CVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNL--PRASERLQIFNADLNNPESFDAAIAG--C 79 (243)
Q Consensus 6 k~i-lvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~--~ 79 (243)
||| ||||||||||++|+++|+++||+|++++|+... ....+..+... .....+++++.+|++|.+.+.+++++ +
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 999999999999999999999999999994321 11122222111 11235789999999999999999974 6
Q ss_pred cEEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCCCchhhhhh
Q 026091 80 TGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRK 156 (243)
Q Consensus 80 d~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~ 156 (243)
++++|+++.... ...++....+++|+.++.++++++++.+ +.++|||+||+++|+.. ...+++|+++..
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~--~~~~~~E~~~~~------ 152 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKV--QEIPQKETTPFY------ 152 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSC--SSSSBCTTSCCC------
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCC--CCCCCCCCCCCC------
Confidence 799999886543 1123334788999999999999999986 13489999999887543 345678887643
Q ss_pred cCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHHHHHHHHhcCc-cccc--cccCcCcee
Q 026091 157 LDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMVMGNR-EEYS--MLLNISMVH 231 (243)
Q Consensus 157 ~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~-~~~~--~~~~~~~i~ 231 (243)
|.++|+.+|.++|+++..++++++++++++||+++|||....... .....+.....+.. .... +.+.++++|
T Consensus 153 ---P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~ 229 (347)
T d1t2aa_ 153 ---PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 229 (347)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeE
Confidence 567899999999999999999999999999999999996543321 11222233333333 3322 366889999
Q ss_pred HHHHHHhhhcc
Q 026091 232 IDDVARAHIFF 242 (243)
Q Consensus 232 v~Dva~a~~~~ 242 (243)
++|+++++..+
T Consensus 230 v~D~~~a~~~~ 240 (347)
T d1t2aa_ 230 AKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHH
T ss_pred ecHHHHHHHHH
Confidence 99999998764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-35 Score=240.06 Aligned_cols=222 Identities=20% Similarity=0.249 Sum_probs=164.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|||||||||||||++|+++|+++|++|++++|............... ...+++++++|++|.+.+.++++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 36999999999999999999999999999987332222222222111 13479999999999999999998 789999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+||.... ...++ ...+++|+.++.+++++|++.+ ++++|++||.++|..... .+..|..+. ..|.
T Consensus 79 HlAa~~~~~~~~~~~-~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~--~~~~e~~~~--------~~p~ 146 (338)
T d1udca_ 79 HFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPK--IPYVESFPT--------GTPQ 146 (338)
T ss_dssp ECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCS--SSBCTTSCC--------CCCS
T ss_pred ECCCccchhhHHhCH-HHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccc--ccccccccc--------CCCc
Confidence 99997543 12233 4899999999999999999999 999999999987755432 222333221 1356
Q ss_pred chHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCccccc----------
Q 026091 162 KSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREEYS---------- 222 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~---------- 222 (243)
++|+.+|.++|.++.++..+ .+++++++||+++||++.... ....++.+.....+....+.
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~ 226 (338)
T d1udca_ 147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED 226 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTT
T ss_pred chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCC
Confidence 78999999999999977665 489999999999999865422 12345555555544432221
Q ss_pred cccCcCceeHHHHHHhhhc
Q 026091 223 MLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~ 241 (243)
+.+.|+|+|++|++.+...
T Consensus 227 g~~~rd~i~v~D~~~~~~~ 245 (338)
T d1udca_ 227 GTGVRDYIHVMDLADGHVV 245 (338)
T ss_dssp SSCEECEEEHHHHHHHHHH
T ss_pred CCceeeEEEEeehhhhccc
Confidence 2456899999999987654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.3e-34 Score=240.46 Aligned_cols=225 Identities=19% Similarity=0.140 Sum_probs=166.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|||||||||||||++|+++|+++|++|++++|++...... .....++..+|+++.+.+.++++++|.||
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~d~Vi 84 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---------DMFCDEFHLVDLRVMENCLKVTEGVDHVF 84 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---------GGTCSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh---------hcccCcEEEeechhHHHHHHHhhcCCeEe
Confidence 456899999999999999999999999999998744422111 11356889999999999999999999999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|+|+.... .........+..|+.++.++++++++.+ +++||++||..+|+.... .+.+|......+. ....|.
T Consensus 85 h~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~--~~~~~~~~~~~e~--~~~~p~ 159 (363)
T d2c5aa1 85 NLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQ--LETTNVSLKESDA--WPAEPQ 159 (363)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGS--SSSSSCEECGGGG--SSBCCS
T ss_pred ecccccccccccccccccccccccchhhHHHHhHHhhC-cccccccccccccccccc--ccccccccccccC--CcCCCC
Confidence 99987554 2234445889999999999999999999 999999999987765432 2223222111110 111256
Q ss_pred chHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHH-HHHHHH-hcCccccc--cccCcCceeHHHH
Q 026091 162 KSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVR-GTLAMV-MGNREEYS--MLLNISMVHIDDV 235 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~-~~~~~~-~~~~~~~~--~~~~~~~i~v~Dv 235 (243)
++|+.+|.++|.+++.+.+++|++++++||+++||+....... .... ...... ...+.... +.+.|+|+|++|+
T Consensus 160 ~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~ 239 (363)
T d2c5aa1 160 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC 239 (363)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH
Confidence 7899999999999999999999999999999999997554422 2222 222222 22222222 2568899999999
Q ss_pred HHhhhcc
Q 026091 236 ARAHIFF 242 (243)
Q Consensus 236 a~a~~~~ 242 (243)
++++..+
T Consensus 240 ~~~~~~~ 246 (363)
T d2c5aa1 240 VEGVLRL 246 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.2e-34 Score=236.60 Aligned_cols=223 Identities=17% Similarity=0.122 Sum_probs=166.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 83 (243)
|+|||||||||||++|+++|+++||+|++++|...... ...+... ....+++++++|++|.+.+.+.+.+ .++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 77 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLREL-GIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 77 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHh-cccCCcEEEEccccChHHhhhhhccccccccc
Confidence 68999999999999999999999999999999543211 1222221 1235799999999999999998875 57888
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+.... .........++.|+.++.+++++|++.+..++|++.||..++ +.. .....+|+++.. |.+
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~-~~~-~~~~~~E~~~~~---------p~~ 146 (321)
T d1rpna_ 78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF-GLI-QAERQDENTPFY---------PRS 146 (321)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG-CSC-SSSSBCTTSCCC---------CCS
T ss_pred cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhc-Ccc-cCCCCCCCCCcc---------ccC
Confidence 88776544 122334588999999999999999999845577777777654 332 334556776543 567
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCcccc--c-cccCcCceeHHHHHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEY--S-MLLNISMVHIDDVAR 237 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~--~-~~~~~~~i~v~Dva~ 237 (243)
+|+.+|.++|.+++.++++++++++++||+++|||...... ..+...+.+...+++..+ . +++.|+|+|++|+|+
T Consensus 147 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~ 226 (321)
T d1rpna_ 147 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE 226 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHH
Confidence 89999999999999999999999999999999999654332 122333444455554332 2 367889999999999
Q ss_pred hhhcc
Q 026091 238 AHIFF 242 (243)
Q Consensus 238 a~~~~ 242 (243)
++.++
T Consensus 227 ~~~~~ 231 (321)
T d1rpna_ 227 AMWLM 231 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=7e-34 Score=234.27 Aligned_cols=236 Identities=26% Similarity=0.367 Sum_probs=171.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.+|+|||||||||||++|+++|+++|++|++++| +......+..+............+.+|+.|.+.+.+++.++|.|+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC-CchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 3589999999999999999999999999999999 555444444333322223345668899999999999999999999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCC--cccccCCCCCchhhh-------
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKD--VDMLDETFWSDVDYI------- 154 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~--~~~~~e~~~~~~~~~------- 154 (243)
|+++..... .+....+..|+.++.+++++|++.+.++++||+||+++++...+. ....+|..|+.....
T Consensus 89 ~~a~~~~~~--~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e 166 (342)
T d1y1pa1 89 HIASVVSFS--NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE 166 (342)
T ss_dssp ECCCCCSCC--SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred hhccccccc--ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence 999976543 334578899999999999999997549999999998655443322 233455554432221
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCC-cHHHHH-HHHhcCccc-cccccCcCc
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAG-SVRGTL-AMVMGNREE-YSMLLNISM 229 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~-~~~~~~-~~~~~~~~~-~~~~~~~~~ 229 (243)
..+..|.++|+.+|..+|.+++.+++++ +++++++||+.+|||...+.... ....+. ....+.... ...++.++|
T Consensus 167 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 246 (342)
T d1y1pa1 167 SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246 (342)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEE
T ss_pred cCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceee
Confidence 1122345679999999999999998876 57889999999999965544322 233333 444444332 234677899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|++++.+
T Consensus 247 v~v~Dva~~~i~~ 259 (342)
T d1y1pa1 247 VSAVDIGLLHLGC 259 (342)
T ss_dssp EEHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHh
Confidence 9999999997653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=9.9e-34 Score=237.44 Aligned_cols=233 Identities=15% Similarity=0.147 Sum_probs=160.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEE---eCCchhh-------------chhhhhhcCCCCCCCeEEEecCCCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTV---RSDPEQK-------------RDLSFLTNLPRASERLQIFNADLNN 68 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~D~~d 68 (243)
+|||||||||||||++|+++|+++||+|++++ |+..... ......... .+.+++++++|++|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh--cCCCcEEEEccCCC
Confidence 47999999999999999999999999999985 1111000 000000000 13578999999999
Q ss_pred hhhHHHHhcc--ccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCccc
Q 026091 69 PESFDAAIAG--CTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 69 ~~~~~~~~~~--~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
.+.+.+++++ +|+|||+||.... .........++.|+.++.+++++|++.+..+++++.||..++ +... .+
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~-~~~~--~~ 155 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEY-GTPN--ID 155 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGG-CCCS--SC
T ss_pred HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccc-cccc--cc
Confidence 9999999985 6999999986543 222223467899999999999999999834456666666544 3321 11
Q ss_pred ccCCCCCc-----hhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC---------------
Q 026091 143 LDETFWSD-----VDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--------------- 202 (243)
Q Consensus 143 ~~e~~~~~-----~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--------------- 202 (243)
..|..... .+.......|.++|+.+|.++|.+++.++++++++++++||+++|||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T d1i24a_ 156 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV 235 (393)
T ss_dssp BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred cccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccc
Confidence 22211100 0000111235678999999999999999999999999999999999965422
Q ss_pred CCCcHHH-HHHHHhcCcccccc--ccCcCceeHHHHHHhhhcc
Q 026091 203 LAGSVRG-TLAMVMGNREEYSM--LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 203 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~ 242 (243)
....+.. ..+...+.+..+.+ .+.|+|+|++|+++++..+
T Consensus 236 ~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~ 278 (393)
T d1i24a_ 236 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIA 278 (393)
T ss_dssp TCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred cccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHH
Confidence 1122333 33455666655543 6679999999999998765
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.3e-33 Score=228.79 Aligned_cols=223 Identities=20% Similarity=0.254 Sum_probs=164.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHH-HhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDA-AIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi 83 (243)
|||||||||||||++++++|+++| ++|+++++.+....... ...+++++++|+++.+.+.+ +.+++|+||
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vi 72 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHVKKCDVVL 72 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------cCCCeEEEECccCChHHHHHHHHhCCCccc
Confidence 379999999999999999999999 58999988443222111 13589999999998766655 667899999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+.... ...+.....++.|+.++.++++++++.+ + ++++.||..+|+.... ...+|..+... ..+...|.+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~-~~~~~ss~~~~~~~~~--~~~~~~~~~~~--~~~~~~p~~ 146 (342)
T d2blla1 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSD--KYFDEDHSNLI--VGPVNKPRW 146 (342)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCC--SSBCTTTCCCB--CCCTTCGGG
T ss_pred cccccccccccccCCcccccccccccccccccccccc-c-cccccccccccccccc--ccccccccccc--ccccCCCcc
Confidence 99997554 1112234789999999999999999998 4 6678888887765532 22233222111 112234667
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC------CcH-HHHHHHHhcCcccccc--ccCcCceeHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA------GSV-RGTLAMVMGNREEYSM--LLNISMVHID 233 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~------~~~-~~~~~~~~~~~~~~~~--~~~~~~i~v~ 233 (243)
.|+.+|.++|.+++.+++++|++++++||+.+||+....... ... ..+.+...+++..+.+ ++.++++|++
T Consensus 147 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~ 226 (342)
T d2blla1 147 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 226 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHH
T ss_pred hhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccc
Confidence 899999999999999999999999999999999986544321 112 3344556676665543 6788999999
Q ss_pred HHHHhhhcc
Q 026091 234 DVARAHIFF 242 (243)
Q Consensus 234 Dva~a~~~~ 242 (243)
|+|+++..+
T Consensus 227 D~~~a~~~~ 235 (342)
T d2blla1 227 DGIEALYRI 235 (342)
T ss_dssp HHHHHHHHH
T ss_pred cccceeeee
Confidence 999998765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3e-33 Score=230.87 Aligned_cols=223 Identities=19% Similarity=0.238 Sum_probs=164.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|.|||||||||||++|+++|+++|++|+++++............... ...+++++++|++|.+.++++++ ++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 67999999999999999999999999999976333222222222111 13478999999999999999987 689999
Q ss_pred EeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCC--CcccccCCCCCchhhhhhcCC
Q 026091 84 HVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGK--DVDMLDETFWSDVDYIRKLDI 159 (243)
Q Consensus 84 ~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~ 159 (243)
|+||.... ...++ ..++.+|+.++.+++++|++.+ +++||++||.++|+.... ...+++|+.+..
T Consensus 80 hlAa~~~~~~~~~~~-~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~--------- 148 (347)
T d1z45a2 80 HFAGLKAVGESTQIP-LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLG--------- 148 (347)
T ss_dssp ECCSCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC---------
T ss_pred EccccccccccccCc-ccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCC---------
Confidence 99997653 22233 4788899999999999999999 999999999998865432 233455554432
Q ss_pred CCchHHhhHHHHHHHHHHHHHH--cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCccccc--c----
Q 026091 160 WGKSYKLSKTLAERAALEFAEE--HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREEYS--M---- 223 (243)
Q Consensus 160 ~~~~y~~sK~~~e~~~~~~~~~--~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~---- 223 (243)
|.++|+.+|.++|.+++++.+. ++++++++||+++||+..... ....+..+.....+...++. +
T Consensus 149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~ 228 (347)
T d1z45a2 149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 228 (347)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence 5678999999999999998754 589999999999999754332 22345555555554443222 1
Q ss_pred ----ccCcCceeHHHHHHhhhc
Q 026091 224 ----LLNISMVHIDDVARAHIF 241 (243)
Q Consensus 224 ----~~~~~~i~v~Dva~a~~~ 241 (243)
...++++++.|++.+++.
T Consensus 229 ~~~~~~~~d~~~~~~~~~~~~~ 250 (347)
T d1z45a2 229 SRDGTPIRDYIHVVDLAKGHIA 250 (347)
T ss_dssp -CCSSCEECEEEHHHHHHHHHH
T ss_pred ccCCceeeeeeeeecccccccc
Confidence 235678888888877654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.6e-33 Score=229.41 Aligned_cols=208 Identities=16% Similarity=0.157 Sum_probs=156.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 82 (243)
+|||||||||||||++|+++|+++|+.|+++.+ .. ..|+.|.+.+.++++ ++|.|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~d~v 58 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-RD----------------------ELNLLDSRAVHDFFASERIDQV 58 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC-TT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC-ch----------------------hccccCHHHHHHHHhhcCCCEE
Confidence 479999999999999999999999999876655 22 248999999999986 48999
Q ss_pred EEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 83 IHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 83 i~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|+|+.... ....+..+.++.|+.++.+++++|++.+ +++|||+||.++|+... ..+++|+.+.+.. ..++
T Consensus 59 ~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~--~~~~~E~~~~~~~----~~~~ 131 (315)
T d1e6ua_ 59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLA--KQPMAESELLQGT----LEPT 131 (315)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTC--CSSBCGGGTTSSC----CCGG
T ss_pred EEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCC--CCCccCCccccCC----CCCC
Confidence 999976543 1122334778999999999999999999 99999999999886542 3456776544322 1234
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCC--CCcHHHH------HHHHhcCcccccc--ccCcCce
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQL--AGSVRGT------LAMVMGNREEYSM--LLNISMV 230 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~------~~~~~~~~~~~~~--~~~~~~i 230 (243)
.++|+.+|.++|++++.+.+++|++++++||+++|||+..... ....... .....+......+ ...++++
T Consensus 132 ~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~ 211 (315)
T d1e6ua_ 132 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 211 (315)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEE
Confidence 5679999999999999999999999999999999999765432 2222211 1122222222222 4568999
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
|++|+++++..+
T Consensus 212 ~v~d~~~~~~~~ 223 (315)
T d1e6ua_ 212 HVDDMAAASIHV 223 (315)
T ss_dssp EHHHHHHHHHHH
T ss_pred EeehhHHHHHHh
Confidence 999999998653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3e-33 Score=229.83 Aligned_cols=226 Identities=18% Similarity=0.151 Sum_probs=162.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch-hhchhhhhhcCC--CCCCCeEEEecCCCChhhHHHHhc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE-QKRDLSFLTNLP--RASERLQIFNADLNNPESFDAAIA--GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~--~~ 79 (243)
.|++||||||||||+||+++|+++||+|++++|..+. ....+..+.... .....++++.+|+++.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 4799999999999999999999999999999994321 112222222111 123468899999999999999986 57
Q ss_pred cEEEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 80 TGVIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSG----TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 80 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
|+|||+|+..... ..+.....++.|+.++.++++++++.+ ...++++.||..++.. ....++|+++..
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~---~~~~~~E~~~~~---- 153 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS---TPPPQSETTPFH---- 153 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT---SCSSBCTTSCCC----
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc---CCCCCCCCCCCC----
Confidence 9999999975541 112334888999999999999988653 1346777777654322 345677877643
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC--CcHHHHHHHHhcCcc-ccc--cccCcCc
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMVMGNRE-EYS--MLLNISM 229 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~-~~~--~~~~~~~ 229 (243)
|.+.|+.+|.++|.++..+.+.++++++++||+++|||....... ...........+... .+. +.+.|++
T Consensus 154 -----p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~ 228 (339)
T d1n7ha_ 154 -----PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 228 (339)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred -----CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence 567899999999999999999999999999999999997543321 112223333334332 222 3668899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|+|+++.++
T Consensus 229 ~~v~D~a~~~~~~ 241 (339)
T d1n7ha_ 229 GFAGDYVEAMWLM 241 (339)
T ss_dssp EEHHHHHHHHHHH
T ss_pred eeeehHHHHHHHH
Confidence 9999999998764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-32 Score=226.34 Aligned_cols=224 Identities=21% Similarity=0.223 Sum_probs=163.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch------hhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE------QKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
.|||||||||||||++|+++|+++|++|++++|.... .......+... ...+++++++|++|.+.+.+++.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeeccccccccccccc
Confidence 4799999999999999999999999999999752111 11111111111 245899999999999999998875
Q ss_pred --ccEEEEeeeccCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhh
Q 026091 79 --CTGVIHVAAPIDI--HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYI 154 (243)
Q Consensus 79 --~d~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~ 154 (243)
+++++|+||..+. ...++ .+.++.|+.++.++++++++.+ +++|+|+||+.+++....... ..+..
T Consensus 80 ~~~~~i~h~Aa~~~~~~~~~~p-~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~-~~~~~------- 149 (346)
T d1ek6a_ 80 YSFMAVIHFAGLKAVGESVQKP-LDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPL-DEAHP------- 149 (346)
T ss_dssp CCEEEEEECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSB-CTTSC-------
T ss_pred cccccccccccccCcHhhHhCH-HHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccc-ccccc-------
Confidence 5689999997654 22244 4889999999999999999999 999999999987765532221 11111
Q ss_pred hhcCCCCchHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCCCCCC--------CCCcHHHHHHHHhcCcccc----
Q 026091 155 RKLDIWGKSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPFICPQ--------LAGSVRGTLAMVMGNREEY---- 221 (243)
Q Consensus 155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~---- 221 (243)
...+.++|+.+|..+|..++++++. .+++.+++||+.+||+..... ....++.+.....+....+
T Consensus 150 --~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g 227 (346)
T d1ek6a_ 150 --TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG 227 (346)
T ss_dssp --CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEEC
T ss_pred --ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcC
Confidence 1235578999999999999998776 499999999999999865432 2233555554444333221
Q ss_pred ------ccccCcCceeHHHHHHhhhcc
Q 026091 222 ------SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ------~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+.+.|+|+|++|+|.++..+
T Consensus 228 ~~~~~~~g~~~Rdfi~v~D~a~~~~~~ 254 (346)
T d1ek6a_ 228 NDYDTEDGTGVRDYIHVVDLAKGHIAA 254 (346)
T ss_dssp SCSSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred CcccCCCCCeeEeEEEEEeccchhhhh
Confidence 124568999999999887653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.98 E-value=2.8e-31 Score=219.39 Aligned_cols=224 Identities=21% Similarity=0.160 Sum_probs=166.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~ 81 (243)
+.|||||||||||||+++++.|+++|++|++++|+.+......... ...++++++.+|++|++.+.+++++ +|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA----RVADGMQSEIGDIRDQNKLLESIREFQPEI 82 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT----TTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh----hcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence 4699999999999999999999999999999999554333222211 1235799999999999999999874 699
Q ss_pred EEEeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 82 VIHVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 82 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
|+|+|+..... ..+.....+++|+.++.++++++++.+..+.+++.||. .++.......+.+|+.+.. |
T Consensus 83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~---------p 152 (356)
T d1rkxa_ 83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEWIWGYRENEAMG---------G 152 (356)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCSSSCBCTTSCBC---------C
T ss_pred hhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccc-ccccccccccccccccccC---------C
Confidence 99999875441 11233588999999999999999998734445555544 4545544555556655432 5
Q ss_pred CchHHhhHHHHHHHHHHHHHH---------cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCc
Q 026091 161 GKSYKLSKTLAERAALEFAEE---------HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISM 229 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~---------~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 229 (243)
.++|+.+|...|..+..++++ +++.++++||+++|||+.... ..++..+.+...+...... ..+.+++
T Consensus 153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 231 (356)
T d1rkxa_ 153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPW 231 (356)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCceEEeeccccccc
Confidence 577999999999999887653 478899999999999975333 3445555555555444333 3678899
Q ss_pred eeHHHHHHhhhcc
Q 026091 230 VHIDDVARAHIFF 242 (243)
Q Consensus 230 i~v~Dva~a~~~~ 242 (243)
+|++|++.++..+
T Consensus 232 ~~v~D~~~a~~~~ 244 (356)
T d1rkxa_ 232 QHVLEPLSGYLLL 244 (356)
T ss_dssp EETHHHHHHHHHH
T ss_pred cccccccchhhhh
Confidence 9999999997754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=2.4e-31 Score=222.14 Aligned_cols=227 Identities=21% Similarity=0.221 Sum_probs=160.3
Q ss_pred CeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCc-----h----hhchhhhhhc-----CCCCCCCeEEEecCCCChh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDP-----E----QKRDLSFLTN-----LPRASERLQIFNADLNNPE 70 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~-----~----~~~~~~~~~~-----~~~~~~~~~~~~~D~~d~~ 70 (243)
|||||||||||||++|+++|++ .|++|+++++-.. . .......+.. .......+.++++|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 4899999999999999999986 6899999874100 0 0000111111 1123456899999999999
Q ss_pred hHHHHhc---cccEEEEeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCc-----c
Q 026091 71 SFDAAIA---GCTGVIHVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDV-----D 141 (243)
Q Consensus 71 ~~~~~~~---~~d~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-----~ 141 (243)
.+.++++ ++|+|+|+|+.... ...+.....++.|+.++.++++++++.+ +++++++||.+++....... .
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccccc
Confidence 9999986 47999999997554 1222334788999999999999999999 99999999988765543322 2
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC-------CcHHHHHH-H
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA-------GSVRGTLA-M 213 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~-------~~~~~~~~-~ 213 (243)
++.|+.+ ..|.++|+.+|.++|.+++.+.+.+|++++++||+++|||+...... ..++.+.. .
T Consensus 162 ~~~e~~~---------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~ 232 (383)
T d1gy8a_ 162 PIDINAK---------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRV 232 (383)
T ss_dssp CBCTTSC---------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHH
T ss_pred ccccccC---------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHH
Confidence 2333332 23678899999999999999999999999999999999998665432 22222211 1
Q ss_pred H----------------hcCccccc--------cccCcCceeHHHHHHhhhcc
Q 026091 214 V----------------MGNREEYS--------MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 214 ~----------------~~~~~~~~--------~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+.+.... +.+.|+|+|++|+|++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~ 285 (383)
T d1gy8a_ 233 MSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILA 285 (383)
T ss_dssp HHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHH
T ss_pred HhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHH
Confidence 1 11111111 24468999999999998754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2e-30 Score=198.60 Aligned_cols=187 Identities=17% Similarity=0.170 Sum_probs=141.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||||+||||||+||++++++|+++||+|++++| +++..... ...+++++.+|++|.+++.++++++|+|||
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R-~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~~~d~vi~ 73 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEc-Chhhcccc--------cccccccccccccchhhHHHHhcCCCEEEE
Confidence 789999999999999999999999999999999 55332111 134789999999999999999999999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchH
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSY 164 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y 164 (243)
++|....... .+.+..++.++++++++++ ++|+|++||.+++..... .+ +....|
T Consensus 74 ~~g~~~~~~~------~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~--------~~----------~~~~~~ 128 (205)
T d1hdoa_ 74 LLGTRNDLSP------TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK--------VP----------PRLQAV 128 (205)
T ss_dssp CCCCTTCCSC------CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC--------SC----------GGGHHH
T ss_pred EeccCCchhh------hhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcc--------cc----------cccccc
Confidence 9987544222 2346678999999999999 999999999875533211 10 122358
Q ss_pred HhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 165 KLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 165 ~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...|..+|+++++ .|++++++||+.+++....... .....+.....+|+++|+|++++.++
T Consensus 129 ~~~~~~~e~~l~~----~~~~~tiirp~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~DvA~~~~~~l 189 (205)
T d1hdoa_ 129 TDDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTGAY--------------TVTLDGRGPSRVISKHDLGHFMLRCL 189 (205)
T ss_dssp HHHHHHHHHHHHH----TCSEEEEECCSEEECCCCCSCC--------------EEESSSCSSCSEEEHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHh----cCCceEEEecceecCCCCcccE--------------EEeeCCCCCCCcCCHHHHHHHHHHHh
Confidence 8889888887754 7999999999999975332210 01111244558999999999988653
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.97 E-value=9.2e-31 Score=214.42 Aligned_cols=230 Identities=18% Similarity=0.167 Sum_probs=162.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC-chhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD-PEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVI 83 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 83 (243)
||||||||||||++|+++|+++|++|+++++-. ......+..+.. ..+++++.+|++|.+.+.+++++ +|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~----~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc----cCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence 799999999999999999999999999987422 222223333322 35799999999999999999986 59999
Q ss_pred EeeeccCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCC-------chhhhh
Q 026091 84 HVAAPIDIH-GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWS-------DVDYIR 155 (243)
Q Consensus 84 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~-------~~~~~~ 155 (243)
|+|+..... ..++....+++|+.+|.+|++++.+.+ ++++++.||.++++...... +..+.... ......
T Consensus 78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T d1orra_ 78 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQY-KYNETETRYTCVDKPNGYDES 155 (338)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTS-CEEECSSCEEETTCTTCBCTT
T ss_pred eecccccccccccChHHHHHHHHHHHHHHHHhhhccc-cccccccccccccccccccc-ccccccccccccccccCcccC
Confidence 999986541 112235889999999999999999999 77777777766665554321 11111110 001111
Q ss_pred hcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCC-CcHHHHH----HHHh--cCcccccc--ccC
Q 026091 156 KLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLA-GSVRGTL----AMVM--GNREEYSM--LLN 226 (243)
Q Consensus 156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~-~~~~~~~----~~~~--~~~~~~~~--~~~ 226 (243)
....|.+.|+.+|...|.++..+.+.+++...++|++.+|++....... ..+..+. .... +.+..+.+ .+.
T Consensus 156 ~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 235 (338)
T d1orra_ 156 TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 235 (338)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCcee
Confidence 1123567899999999999999999999999999999999876544432 2223222 2222 23333332 567
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
++++|++|++++++.+
T Consensus 236 r~~~~v~D~~~~~~~~ 251 (338)
T d1orra_ 236 RDVLHAEDMISLYFTA 251 (338)
T ss_dssp EECEEHHHHHHHHHHH
T ss_pred EeeecccchhhHHHHH
Confidence 8999999999998764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.5e-31 Score=205.07 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=145.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++|+|||||||||||++++++|+++|. +|++++|+....... ....++.+.+|+.+.+.+.+.++++|+
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~~~~~~~~~~~~~d~ 83 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQGHDV 83 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeeccccccccccccccccc
Confidence 357899999999999999999999994 899999954321111 123678888999999999999999999
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||+++..... .+...+++.|+.++.+++++|++.+ +++|||+||.+++.. +.
T Consensus 84 vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~------------------------~~ 136 (232)
T d2bkaa1 84 GFCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------------------------SN 136 (232)
T ss_dssp EEECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------------------------CS
T ss_pred ccccccccccc--cchhhhhhhcccccceeeecccccC-ccccccCCccccccC------------------------cc
Confidence 99999864332 2345788999999999999999999 999999999764311 22
Q ss_pred chHHhhHHHHHHHHHHHHHHcCc-cEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGL-DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi-~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
+.|+.+|..+|..+++ .++ +++|+||+.+||+..... ....+........ .........||++|+|++++
T Consensus 137 ~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 137 FLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSL--PDSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp SHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSC--CTTGGGGTEEEHHHHHHHHH
T ss_pred chhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCc---HHHHHHHHHhhcc--CCcccCCCeEEHHHHHHHHH
Confidence 5699999999998866 465 489999999999865432 2222222222211 01122336799999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 208 ~~ 209 (232)
T d2bkaa1 208 NN 209 (232)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.95 E-value=1.1e-27 Score=191.34 Aligned_cols=191 Identities=15% Similarity=0.072 Sum_probs=147.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi 83 (243)
|||||||||||||++|+++|.++||+|++++|++ .|+.|.+.+.++++ ++|+||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~~~d~vi 57 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEKKPNVVI 57 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHcCCCEEE
Confidence 4699999999999999999999999999998822 38999999999997 579999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+|+.... ............|.....++.+.++..+ ..+++.||..+++.. ...+..|.++.+ +..
T Consensus 58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~--~~~~~~e~~~~~---------~~~ 124 (281)
T d1vl0a_ 58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGE--AKEPITEFDEVN---------PQS 124 (281)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSC--CSSCBCTTSCCC---------CCS
T ss_pred eeccccccccccccchhhccccccccccccccccccc--ccccccccceeeecc--cccccccccccc---------chh
Confidence 99987554 1122334778889999999999988877 678888887765443 345566666543 456
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHH-HHHhcCccccccccCcCceeHHHHHHhhhc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTL-AMVMGNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
.|+.+|...|.+++. ++.+++++||+++||++.. +...+. ....+.......++.++++|++|+++++.+
T Consensus 125 ~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~ 195 (281)
T d1vl0a_ 125 AYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNN-----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK 195 (281)
T ss_dssp HHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSC-----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcc-----cccchhhhhccCCceeecCCceeccchhhhhhhhhhh
Confidence 799999999987765 5889999999999999642 233333 333444455556888999999999999876
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 196 ~ 196 (281)
T d1vl0a_ 196 V 196 (281)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=5.9e-28 Score=185.61 Aligned_cols=184 Identities=20% Similarity=0.166 Sum_probs=127.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh-ccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI-AGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~ 81 (243)
+|||||||||||||++++++|+++|+ +|.+++|+.... ..++.. +..|..++.+.+ ..+|.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------------~~~~~~---~~~d~~~~~~~~~~~~d~ 65 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------HPRLDN---PVGPLAELLPQLDGSIDT 65 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------CTTEEC---CBSCHHHHGGGCCSCCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------------cccccc---cccchhhhhhccccchhe
Confidence 68999999999999999999999997 677777732210 123333 333444333333 35899
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCC
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWG 161 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (243)
|||++|.......+ ...+.+.|+.++.+++++|++.+ +++++++||.+++.. +.
T Consensus 66 vi~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~------------------------~~ 119 (212)
T d2a35a1 66 AFCCLGTTIKEAGS-EEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK------------------------SS 119 (212)
T ss_dssp EEECCCCCHHHHSS-HHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------------------------CS
T ss_pred eeeeeeeecccccc-ccccccchhhhhhhccccccccc-ccccccccccccccc------------------------cc
Confidence 99998765332223 34889999999999999999999 999999999764311 22
Q ss_pred chHHhhHHHHHHHHHHHHHHcCc-cEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhh
Q 026091 162 KSYKLSKTLAERAALEFAEEHGL-DLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHI 240 (243)
Q Consensus 162 ~~y~~sK~~~e~~~~~~~~~~gi-~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 240 (243)
+.|..+|..+|+.+++ .++ +++|+||+.+||+......... ..........+.+.+||++|+|++++
T Consensus 120 ~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~~i~v~DvA~ai~ 187 (212)
T d2a35a1 120 IFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEI--------LAAPIARILPGKYHGIEACDLARALW 187 (212)
T ss_dssp SHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGG--------TTCCCC----CHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHHHH--------HHHHHhhccCCCCcEEEHHHHHHHHH
Confidence 5599999999998865 455 5999999999998654321110 01111111123346799999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 188 ~~ 189 (212)
T d2a35a1 188 RL 189 (212)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=8.2e-26 Score=176.60 Aligned_cols=200 Identities=18% Similarity=0.175 Sum_probs=149.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+++.|+++||||++.||++++++|++.|++|++.+| +.+..+... + ..+.+++.+|++|+++++++++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r-~~~~l~~~~---~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 72 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEGPLREAA---E----AVGAHPVVMDVADPASVERGFAEAL 72 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH---H----TTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---H----HcCCeEEEEecCCHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999 553332221 1 1267889999999999988875
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++|||||.... .+.+.|...+++|+.++..+.+++.+. + -..++++||.+ ..+.
T Consensus 73 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~-~~~~-------- 142 (242)
T d1ulsa_ 73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGN-------- 142 (242)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCC--------
T ss_pred HhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccc-ccCC--------
Confidence 47999999997543 345678889999999999998876654 3 34677777643 2111
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++.+. ||+++.+.||.+-.+...... ....+.... ..++
T Consensus 143 --------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~----~~~~~~~~~-~~pl 203 (242)
T d1ulsa_ 143 --------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP----EKVREKAIA-ATPL 203 (242)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC----HHHHHHHHH-TCTT
T ss_pred --------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC----HHHHHHHHh-cCCC
Confidence 123469999999999999998774 899999999999988644332 112222211 1223
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+...+|+|+++.+|
T Consensus 204 ~-----R~~~pedia~~v~fL 219 (242)
T d1ulsa_ 204 G-----RAGKPLEVAYAALFL 219 (242)
T ss_dssp C-----SCBCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 3 688999999999886
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=5.1e-26 Score=179.12 Aligned_cols=206 Identities=12% Similarity=0.076 Sum_probs=152.7
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|+.+.|+++||||++.||++++++|++.|++|++.+| +.+..+ ....+.. .+.++.++++|++|+++++++++
T Consensus 7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~~l~~---~g~~~~~~~~Dvs~~~~~~~~~~~~ 82 (255)
T d1fmca_ 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH---cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4456799999999999999999999999999999999 543332 2222332 24578999999999998888875
Q ss_pred -----cccEEEEeeeccCC----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 -----GCTGVIHVAAPIDI----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.++|...+++|+.++..+.+.+.+. + -.++|++||.+...+.+
T Consensus 83 ~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~------- 154 (255)
T d1fmca_ 83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI------- 154 (255)
T ss_dssp HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT-------
T ss_pred HHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcccc-------
Confidence 47999999996543 234668889999999999988765543 4 45899999976443321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+........ ...+.... ..++
T Consensus 155 ---------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---e~~~~~~~-~~pl 215 (255)
T d1fmca_ 155 ---------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---EIEQKMLQ-HTPI 215 (255)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---HHHHHHHH-TCSS
T ss_pred ---------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH---HHHHHHHh-cCCC
Confidence 2346999999999999999877 489999999999988743322211 11122211 2223
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+..++|+|+++++|
T Consensus 216 ~-----R~g~pedvA~~v~fL 231 (255)
T d1fmca_ 216 R-----RLGQPQDIANAALFL 231 (255)
T ss_dssp C-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 3 688999999999886
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=1.2e-25 Score=175.56 Aligned_cols=196 Identities=16% Similarity=0.186 Sum_probs=149.2
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+| +++..+.+. .+. ..+..++++|++|+++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEEGKAMA--AEL---ADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999 543332221 111 3478899999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... .+.++|...+++|+.++..+.+.+.+ .+ -.+||++||.....+.+
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~--------- 147 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV--------- 147 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccc---------
Confidence 47999999997543 34466888999999999998876543 33 46899999987543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ ....++.
T Consensus 148 -------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----------~~~~pl~- 203 (244)
T d1nffa_ 148 -------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------IFQTALG- 203 (244)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----------CSCCSSS-
T ss_pred -------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----------HHhcccc-
Confidence 2246999999999999999877 489999999999988754322111 0112222
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 204 ----R~~~p~diA~~v~fL 218 (244)
T d1nffa_ 204 ----RAAEPVEVSNLVVYL 218 (244)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 688999999999876
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.94 E-value=2.9e-25 Score=176.25 Aligned_cols=210 Identities=14% Similarity=0.186 Sum_probs=153.2
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|++|||||++.||++++++|+++|++|++++| +.+..+..... . .....+.++.+|++|+++++++++
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~--l-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKVCNN--I-GSPDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--H-CCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--h-cCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999 54333222211 1 123468899999999999988875
Q ss_pred --cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 --GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... ...+.+...+++|+.++..+.+++.+. + -.++|++||.+......
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~------- 151 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE------- 151 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT-------
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccccc-------
Confidence 47999999986432 223567789999999999988876543 3 46899999876543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++.+ +||+++.+.||.+.++......................+.
T Consensus 152 --------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (268)
T d2bgka1 152 --------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK 217 (268)
T ss_dssp --------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC
T ss_pred --------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC
Confidence 01236999999999999999877 4899999999999998755443322222222222222222
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|++++||+
T Consensus 218 g-----r~~~pedvA~~v~fL~ 234 (268)
T d2bgka1 218 G-----TLLRAEDVADAVAYLA 234 (268)
T ss_dssp S-----CCCCHHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHHh
Confidence 2 6889999999998863
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.94 E-value=8.1e-26 Score=177.62 Aligned_cols=202 Identities=16% Similarity=0.114 Sum_probs=150.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|++|||||++.||++++++|++.|++|++.+| +.+..+. ...+.. .+.++..+++|++|+++++++++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r-~~~~l~~~~~~l~~---~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSVVDEIKS---FGYESSGYAGDVSKKEEISEVINKILTE 84 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 6799999999999999999999999999999999 5433322 222222 35578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+|+.... ...++|...+++|+.++..+.+++.+ .+ -.+||++||.+...+.+
T Consensus 85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~--------- 154 (251)
T d2c07a1 85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV--------- 154 (251)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCC---------
Confidence 47999999986543 33467888999999999888876543 34 57999999987553331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.|.||.+..+...... ....+..... .++.
T Consensus 155 -------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~----~~~~~~~~~~-~pl~- 215 (251)
T d2c07a1 155 -------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS----EQIKKNIISN-IPAG- 215 (251)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC----HHHHHHHHTT-CTTS-
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC----HHHHHHHHhc-CCCC-
Confidence 2246999999999999999877 4899999999999988644332 2222222222 2333
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++++|
T Consensus 216 ----R~~~pedvA~~v~fL 230 (251)
T d2c07a1 216 ----RMGTPEEVANLACFL 230 (251)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.94 E-value=4.8e-26 Score=179.51 Aligned_cols=206 Identities=17% Similarity=0.213 Sum_probs=152.5
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|++++|+++||||++.||++++++|+++|++|++.+| +.+..+... .+. +.++..+.+|++|+++++++++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~--~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~ 74 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADI-NLEAARATA--AEI---GPAACAIALDVTDQASIDRCVAELL 74 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES-CHHHHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---CCceEEEEeeCCCHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999 543332221 111 4578999999999999998876
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+++.+ .++-.+||++||.+...+.+
T Consensus 75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------- 147 (256)
T d1k2wa_ 75 DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA------- 147 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-------
T ss_pred HHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc-------
Confidence 47999999997543 34566888999999999998876443 22246899999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHH-------
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMV------- 214 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~------- 214 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+..... ........
T Consensus 148 ---------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~----~~~~~~~~~~~~~~~ 208 (256)
T d1k2wa_ 148 ---------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGV----DAKFADYENLPRGEK 208 (256)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHH----HHHHHHHHTCCTTHH
T ss_pred ---------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhh----hhhhhhhccCChHHH
Confidence 2246999999999999999877 489999999999988742211 01000000
Q ss_pred ---hcCccccccccCcCceeHHHHHHhhhccC
Q 026091 215 ---MGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 215 ---~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.....++. .+...+|+|+++++|+
T Consensus 209 ~~~~~~~~Plg-----R~~~p~evA~~v~fL~ 235 (256)
T d1k2wa_ 209 KRQVGAAVPFG-----RMGRAEDLTGMAIFLA 235 (256)
T ss_dssp HHHHHHHSTTS-----SCBCHHHHHHHHHHTT
T ss_pred HHHHHhcCCCC-----CCcCHHHHHHHHHHHh
Confidence 00111222 6889999999999874
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=4.1e-26 Score=177.92 Aligned_cols=197 Identities=18% Similarity=0.193 Sum_probs=136.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe--EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS--VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.|++|||||||||||++++++|+++|++ |++++| +++....+ ..+++++.+|+.+.+.+.++++++|+
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R-~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~d~ 71 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKI---------GGEADVFIGDITDADSINPAFQGIDA 71 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEES-CHHHHHHT---------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcC-CHHHHHhc---------cCCcEEEEeeecccccccccccccee
Confidence 4789999999999999999999999975 556677 55332221 24789999999999999999999999
Q ss_pred EEEeeeccCC--------------CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 82 VIHVAAPIDI--------------HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 82 vi~~a~~~~~--------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
|||+|+.... ...........+|+.++.+++..+.... .+++.+.|+...+....+ ..
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~------~~- 143 (252)
T d2q46a1 72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHP------LN- 143 (252)
T ss_dssp EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCG------GG-
T ss_pred eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcc------cc-
Confidence 9999975332 0012223567889999999999999988 888988887543211100 00
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
......|...+.+.+ .+..+++++++++||+++||+...... ...+.... ......
T Consensus 144 ----------~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~---------~~~~~~~~-~~~~~~ 199 (252)
T d2q46a1 144 ----------KLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVRE---------LLVGKDDE-LLQTDT 199 (252)
T ss_dssp ----------GGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSC---------EEEESTTG-GGGSSC
T ss_pred ----------cccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchhh---------hhhccCcc-cccCCC
Confidence 001122444444433 445567999999999999999643221 01111111 124456
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
+++|++|+|++++.+
T Consensus 200 ~~i~~~Dva~a~~~~ 214 (252)
T d2q46a1 200 KTVPRADVAEVCIQA 214 (252)
T ss_dssp CEEEHHHHHHHHHHH
T ss_pred CeEEHHHHHHHHHHH
Confidence 899999999998765
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.94 E-value=3e-25 Score=173.96 Aligned_cols=205 Identities=15% Similarity=0.147 Sum_probs=146.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+|+...... ..++. .+.++..+++|++|+++++++++
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~--~~~~~---~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRN---LGRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH--HHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH--HHHHH---cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999995432211 11222 25688999999999999988875
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++|||||.... .+.+.|...+++|+.++..+.+++.+ .+ -.+||++||.+...+.+
T Consensus 78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~--------- 147 (247)
T d2ew8a1 78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE--------- 147 (247)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS---------
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCc---------
Confidence 47999999997543 34567889999999999998886554 34 46899999976432221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ ...........+++
T Consensus 148 -------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~~l~- 210 (247)
T d2ew8a1 148 -------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS---AMFDVLPNMLQAIP- 210 (247)
T ss_dssp -------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSSSC-
T ss_pred -------------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc---hhHHHHHHHhccCC-
Confidence 2246999999999999999876 489999999999988754322111 01111111111222
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++|+
T Consensus 211 ----r~~~pedvA~~v~fL~ 226 (247)
T d2ew8a1 211 ----RLQVPLDLTGAAAFLA 226 (247)
T ss_dssp ----SCCCTHHHHHHHHHHT
T ss_pred ----CCCCHHHHHHHHHHHh
Confidence 6788999999998874
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.8e-25 Score=174.96 Aligned_cols=203 Identities=18% Similarity=0.175 Sum_probs=151.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---cc
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---GC 79 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~ 79 (243)
+++|++|||||++.||++++++|++.|++|++++| +.+..+.+. .+ ..+++.+.+|++|.++++++++ ++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r-~~~~l~~~~--~~----~~~~~~~~~Dv~d~~~v~~~~~~~g~i 77 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQADLDSLV--RE----CPGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HH----STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHH--Hh----cCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 47899999999999999999999999999999999 554332222 11 2367899999999999999987 47
Q ss_pred cEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCCCc
Q 026091 80 TGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSD 150 (243)
Q Consensus 80 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~ 150 (243)
|++||+|+.... .+.+++...+++|+.++..+.+++.+. +...++|++||.+...+.+
T Consensus 78 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~------------- 144 (244)
T d1pr9a_ 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT------------- 144 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------------
T ss_pred eEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc-------------
Confidence 999999987543 345778889999999998887765442 2246899999976543221
Q ss_pred hhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCc
Q 026091 151 VDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNI 227 (243)
Q Consensus 151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+......... . ..+... ...++.
T Consensus 145 ---------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~-~-~~~~~~-~~~pl~----- 207 (244)
T d1pr9a_ 145 ---------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-H-KAKTML-NRIPLG----- 207 (244)
T ss_dssp ---------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSH-H-HHHHHH-TTCTTC-----
T ss_pred ---------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccCh-H-HHHHHH-hcCCCC-----
Confidence 2246999999999999999877 4899999999999987543332221 1 112221 122233
Q ss_pred CceeHHHHHHhhhcc
Q 026091 228 SMVHIDDVARAHIFF 242 (243)
Q Consensus 228 ~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++.+|
T Consensus 208 R~~~peevA~~v~fL 222 (244)
T d1pr9a_ 208 KFAEVEHVVNAILFL 222 (244)
T ss_dssp SCBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.93 E-value=7.7e-26 Score=178.55 Aligned_cols=209 Identities=17% Similarity=0.142 Sum_probs=151.7
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.++.|+++||||++.||++++++|+++|++|++.+|+.....+....+.. .+.++.++++|++|+++++++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS---KGFKVEASVCDLSSRSERQELMNTVAN 81 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999943322222222222 35578899999999988887764
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+||.... .+.+++...+++|+.++..+.+++.+. + -.+||++||.+...+.+
T Consensus 82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~------- 153 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP------- 153 (259)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT-------
T ss_pred HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccc-------
Confidence 37999999996543 345678889999999999888876543 3 46999999976532221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcH-HHHHHHHhcCccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSV-RGTLAMVMGNREE 220 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+.......... ........ ...+
T Consensus 154 ---------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~p 217 (259)
T d2ae2a_ 154 ---------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI-DRCA 217 (259)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH-HTST
T ss_pred ---------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHH-hcCC
Confidence 2246999999999999999877 48999999999998864322211111 11111111 1122
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. .+...+|+|+++++|
T Consensus 218 l~-----R~g~pedvA~~v~fL 234 (259)
T d2ae2a_ 218 LR-----RMGEPKELAAMVAFL 234 (259)
T ss_dssp TC-----SCBCHHHHHHHHHHH
T ss_pred CC-----CCcCHHHHHHHHHHH
Confidence 33 688999999999886
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.93 E-value=2.7e-25 Score=175.28 Aligned_cols=211 Identities=17% Similarity=0.122 Sum_probs=151.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|++.|++|.+.+| +.+..+...........+.++..+++|++|+++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999 554332222211111234578899999999999888875
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++|||||.... .+.++|...+++|+.++.++.+++.+. + -.+||++||.+...+.+
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~-------- 151 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG-------- 151 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS--------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCC--------
Confidence 47999999986432 345678889999999999998866443 3 46899999976543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC----CCCcHHHHHHHHhcCc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ----LAGSVRGTLAMVMGNR 218 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~----~~~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+..... .............. .
T Consensus 152 --------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~ 216 (258)
T d1iy8a_ 152 --------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ-V 216 (258)
T ss_dssp --------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT-T
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHh-c
Confidence 2246999999999999999877 489999999999987632111 00001111111111 1
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.++. .+...+|+|+++++|+
T Consensus 217 ~pl~-----R~~~p~dvA~~v~fL~ 236 (258)
T d1iy8a_ 217 NPSK-----RYGEAPEIAAVVAFLL 236 (258)
T ss_dssp CTTC-----SCBCHHHHHHHHHHHT
T ss_pred CCCC-----CCcCHHHHHHHHHHHh
Confidence 1222 6889999999998874
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.93 E-value=1.3e-25 Score=174.91 Aligned_cols=193 Identities=19% Similarity=0.156 Sum_probs=145.1
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|++|||||++.||++++++|++.|++|+++.|+.. . ..++..+++|++|+++++++++
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~-~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-A-------------PKGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC-C-------------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-h-------------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999433 1 2366889999999999888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.|...+++|+.++..+.+++. +.+ -.+||++||.+...+.+
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~--------- 140 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG--------- 140 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC--------------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCc---------
Confidence 47999999987543 3456788899999999888876544 344 56999999987553331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+...... ....+.. ....++.
T Consensus 141 -------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~----~~~~~~~-~~~~pl~- 201 (237)
T d1uzma1 141 -------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD----ERIQQGA-LQFIPAK- 201 (237)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC----HHHHHHH-GGGCTTC-
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC----HHHHHHH-HhcCCCC-
Confidence 2246999999999999999877 4899999999999886422111 1111111 1222233
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++++|
T Consensus 202 ----R~~~pedvA~~v~fL 216 (237)
T d1uzma1 202 ----RVGTPAEVAGVVSFL 216 (237)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCcCHHHHHHHHHHH
Confidence 688999999999886
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.1e-25 Score=175.86 Aligned_cols=201 Identities=17% Similarity=0.169 Sum_probs=151.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+.|+++||||++.||++++++|+++|++|++.+| +++..+.+... . +.+...+.+|++|+++++++++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r-~~~~l~~~~~~--~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTAT-SENGAQAISDY--L---GANGKGLMLNVTDPASIESVLEKIRAE 75 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHH--H---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH--h---CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence 46899999999999999999999999999999999 55433222211 1 2367889999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+++.+. + -.+||++||.+...+.+
T Consensus 76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~--------- 145 (243)
T d1q7ba_ 76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNG--------- 145 (243)
T ss_dssp TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCC---------
Confidence 47999999987543 345678889999999999998876543 4 46899999976543331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+...... ........ ...++.
T Consensus 146 -------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~----~~~~~~~~-~~~pl~- 206 (243)
T d1q7ba_ 146 -------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS----DDQRAGIL-AQVPAG- 206 (243)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC----HHHHHHHH-TTCTTS-
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh----hhHHHHHH-hcCCCC-
Confidence 2246999999999999999877 4899999999999876433221 11111221 222333
Q ss_pred ccCcCceeHHHHHHhhhcc
Q 026091 224 LLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++.+|
T Consensus 207 ----R~~~pedvA~~v~fL 221 (243)
T d1q7ba_ 207 ----RLGGAQEIANAVAFL 221 (243)
T ss_dssp ----SCBCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHH
Confidence 688999999999886
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.93 E-value=4.4e-25 Score=174.09 Aligned_cols=205 Identities=18% Similarity=0.180 Sum_probs=137.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+.|+++||||++.||++++++|++.|++|++++|+.....+....+.. .+.++..+.+|++++++++++++
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK---KGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999943322222222222 24578999999999988877764
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
.+|++||+||.... .+.+++...+++|+.++..+.+++.+ .+ -.+||++||.....+.+
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~--------- 153 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS--------- 153 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------------
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc---------
Confidence 37999999987543 34566888999999999988886554 34 56999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+......... ..+.. ....++.
T Consensus 154 -------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~-~~~~pl~- 215 (259)
T d1xq1a_ 154 -------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---FKKVV-ISRKPLG- 215 (259)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------
T ss_pred -------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH---HHHHH-HhCCCCC-
Confidence 2346999999999999999877 4899999999999887543321110 11111 1112233
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++++|+
T Consensus 216 ----R~~~pedvA~~v~fL~ 231 (259)
T d1xq1a_ 216 ----RFGEPEEVSSLVAFLC 231 (259)
T ss_dssp ------CCGGGGHHHHHHHT
T ss_pred ----CCcCHHHHHHHHHHHh
Confidence 6788999999998874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=3.4e-25 Score=173.07 Aligned_cols=205 Identities=17% Similarity=0.149 Sum_probs=152.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-- 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 78 (243)
|..+.|++|||||++.||++++++|++.|++|++++| +.+....+. .+ ..+++.+.+|++|.+++++++++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~--~~----~~~~~~~~~Dv~~~~~v~~~~~~~g 73 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSDLVSLA--KE----CPGIEPVCVDLGDWDATEKALGGIG 73 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HH----STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--Hh----cCCCeEEEEeCCCHHHHHHHHHHcC
Confidence 7778999999999999999999999999999999999 543332221 12 23688999999999999999874
Q ss_pred -ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 79 -CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 79 -~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
+|++||+||.... .+.+.+...+++|+.++..+.+++.+. +.-.++|++||.+...+.+
T Consensus 74 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------- 142 (242)
T d1cyda_ 74 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------- 142 (242)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------
T ss_pred CCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC-----------
Confidence 7999999986543 355668889999999999998865432 2246899999976432221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ +...+... ...++.
T Consensus 143 -----------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~-~~~pl~--- 205 (242)
T d1cyda_ 143 -----------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKLK-ERHPLR--- 205 (242)
T ss_dssp -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHHH-HHSTTS---
T ss_pred -----------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--HHHHHHHH-hcCCCC---
Confidence 2246999999999999999877 489999999999987632211111 11111111 112233
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++.+|
T Consensus 206 --R~~~peeva~~v~fL 220 (242)
T d1cyda_ 206 --KFAEVEDVVNSILFL 220 (242)
T ss_dssp --SCBCHHHHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHH
Confidence 688999999999886
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.93 E-value=2.4e-25 Score=175.98 Aligned_cols=209 Identities=17% Similarity=0.183 Sum_probs=147.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.|++|||||++.||++++++|+++|++|++.+|++.+..+... .+.. ..+.++.++++|++|+++++++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA--QHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH--HHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999995543332222 1111 124578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+++...+++|+.++.++.+++.+ .+ -.+||++||.+...+.+
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~--------- 150 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA--------- 150 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccC---------
Confidence 47999999997543 34567889999999999888776544 34 46999999986543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHH-------HHHhc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTL-------AMVMG 216 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~-------~~~~~ 216 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+.............. .....
T Consensus 151 -------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (260)
T d1x1ta1 151 -------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLS 217 (260)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHH
T ss_pred -------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHH
Confidence 2246999999999999999877 489999999999988754433211111000 00000
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+. ..+...+|+|+++++|
T Consensus 218 ~~~Pl-----~R~g~pediA~~v~fL 238 (260)
T d1x1ta1 218 EKQPS-----LQFVTPEQLGGTAVFL 238 (260)
T ss_dssp HHCTT-----CCCBCHHHHHHHHHHH
T ss_pred hcCCC-----CCCcCHHHHHHHHHHH
Confidence 11122 2688999999999886
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.5e-25 Score=179.27 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=138.3
Q ss_pred EEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh-HHHHh-----cccc
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES-FDAAI-----AGCT 80 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~-----~~~d 80 (243)
|||||||||||++|++.|+++|+ +|+++.+ -.... ....+.. ....|..+.+. ..... ..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~-~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDGT-KFVNLVD---------LNIADYMDKEDFLIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC-CSSGG-GGHHHHT---------SCCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEEC-CCCcc-hhhcccc---------cchhhhccchHHHHHHhhhhcccchh
Confidence 89999999999999999999995 7888764 22111 1111111 11122222222 22222 3578
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCC
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIW 160 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 160 (243)
+|+|+|+....... +.....+.|+.++.+++++++..+ + ++++.||..++++... ....|+.+ .+|
T Consensus 71 ~i~~~aa~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~--~~~~~~~~---------~~~ 136 (307)
T d1eq2a_ 71 AIFHEGACSSTTEW-DGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS--DFIESREY---------EKP 136 (307)
T ss_dssp EEEECCSCCCTTCC-CHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCS--CBCSSGGG---------CCC
T ss_pred hhhhhccccccccc-cccccccccccccccccccccccc-c-cccccccccccccccc--cccccccc---------ccc
Confidence 99999986555433 345788889999999999999998 6 4677777666554432 22222221 236
Q ss_pred CchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCC--CCCcHHHHHHHHhcC-cccc-c--cccCcCceeHHH
Q 026091 161 GKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQ--LAGSVRGTLAMVMGN-REEY-S--MLLNISMVHIDD 234 (243)
Q Consensus 161 ~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~--~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~i~v~D 234 (243)
.+.|+.+|.++|.+++.++++++++++++||+++|||..... ....+..+.+.+... .... . ....++++|++|
T Consensus 137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d 216 (307)
T d1eq2a_ 137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (307)
T ss_dssp SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred ccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence 678999999999999999999999999999999999975433 233344444444433 3322 2 255789999999
Q ss_pred HHHhhhcc
Q 026091 235 VARAHIFF 242 (243)
Q Consensus 235 va~a~~~~ 242 (243)
+++++..+
T Consensus 217 ~~~~~~~~ 224 (307)
T d1eq2a_ 217 VADVNLWF 224 (307)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998753
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.93 E-value=4.8e-25 Score=173.15 Aligned_cols=205 Identities=14% Similarity=0.154 Sum_probs=149.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+| +.+..+...... ....++.++++|++|+++++++++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSV---GTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH---CCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh---CCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999 554333222211 124579999999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.++|...+++|+.++..+.+++.+. +.-.+||++||.+...+.+
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~--------- 150 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------- 150 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---------
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC---------
Confidence 47999999987543 345667789999999999998876543 3124799999976542221
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ ... .......++
T Consensus 151 -------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~--~~~~~~~pl 213 (251)
T d1zk4a1 151 -------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA--EEA--MSQRTKTPM 213 (251)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH--HHH--HTSTTTCTT
T ss_pred -------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH--HHH--HHHHhCCCC
Confidence 2246999999999999988754 489999999999987643222110 100 011111222
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+...+|+|+++++|
T Consensus 214 ~-----R~~~pedvA~~v~fL 229 (251)
T d1zk4a1 214 G-----HIGEPNDIAYICVYL 229 (251)
T ss_dssp S-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 688999999999886
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.93 E-value=3.3e-25 Score=174.95 Aligned_cols=207 Identities=15% Similarity=0.108 Sum_probs=150.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+|+..+..+. .+.+.. .+.++..+++|++|+++++++++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~---~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK---VGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999955433222 222222 24578899999999999888876
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.++|...+++|+.++..+.+++.+ .+.-.+|+++||.+...+.+
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~-------- 153 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP-------- 153 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc--------
Confidence 47999999987544 34567888999999999888776544 34234689999976432221
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+.+.++.+. ||+++.+.||.+..+........ ....+.. ....++.
T Consensus 154 --------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~-~~~~pl~ 216 (261)
T d1geea_ 154 --------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQRADV-ESMIPMG 216 (261)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHHHHHH-HTTCTTS
T ss_pred --------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC--HHHHHHH-HhcCCCC
Confidence 22469999999999999998774 89999999999988742211000 0111111 1222333
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++++|
T Consensus 217 -----R~~~pediA~~v~fL 231 (261)
T d1geea_ 217 -----YIGEPEEIAAVAAWL 231 (261)
T ss_dssp -----SCBCHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHH
Confidence 688999999999886
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=2.4e-25 Score=174.51 Aligned_cols=202 Identities=15% Similarity=0.113 Sum_probs=147.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.+.|++|||||++.||++++++|+++|++|.+.+|+ ++..+..+ .. +..++++|++|.++++++++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~-~~~~~~~~---~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAE---AI-----GGAFFQVDLEDERERVRFVEEAAYA 73 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-TTHHHHHH---HH-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHH---Hc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 367999999999999999999999999999999994 43332222 11 45788999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.++|...+++|+.++.++.+++.+. + -.+||++||.+...+.+
T Consensus 74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~--------- 143 (248)
T d2d1ya1 74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ--------- 143 (248)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT---------
T ss_pred cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccccccc---------
Confidence 47999999987543 344667889999999999998876553 3 46999999987543331
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCC--CcHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLA--GSVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~ 221 (243)
...+|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+....... .......+... ...++
T Consensus 144 -------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pl 209 (248)
T d2d1ya1 144 -------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE-DLHAL 209 (248)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH-TTSTT
T ss_pred -------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH-hcCCC
Confidence 2346999999999999999877 48999999999998763211000 00000111111 11122
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+...+|+|+++.+|
T Consensus 210 ~-----R~~~pedia~~v~fL 225 (248)
T d2d1ya1 210 R-----RLGKPEEVAEAVLFL 225 (248)
T ss_dssp S-----SCBCHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 2 688999999999886
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.4e-25 Score=173.73 Aligned_cols=204 Identities=16% Similarity=0.144 Sum_probs=149.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||++.||+++++.|++.|++|++++| +.+..+.+.. + ..+..++.+|++|+++++++++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~--~----~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESGGRALEQ--E----LPGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--H----CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--h----cCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999 5543322221 1 2368899999999999988876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... .+.+.|...+++|+.++.++.+++.+.- +-.++|++||.+...+.+
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~---------- 146 (250)
T d1ydea1 77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA---------- 146 (250)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc----------
Confidence 47999999985432 2345578899999999999988766541 025999999976543321
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC---CCCcHHHHHHHHhcCcccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ---LAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~ 221 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+..... .+.....+.+..... ++
T Consensus 147 ------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--pl 212 (250)
T d1ydea1 147 ------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ--PL 212 (250)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS--TT
T ss_pred ------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC--CC
Confidence 2346999999999999999877 489999999999987632111 111112222222222 22
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+...+|+|+++++|
T Consensus 213 ~-----R~g~p~eva~~v~fL 228 (250)
T d1ydea1 213 G-----RMGQPAEVGAAAVFL 228 (250)
T ss_dssp S-----SCBCHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHH
Confidence 2 789999999999886
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=6.6e-25 Score=172.30 Aligned_cols=207 Identities=17% Similarity=0.165 Sum_probs=150.6
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.+.|+++||||++.||++++++|+++|++|.+.+| +.+.. +....+.+ ..+.++.++++|++|+++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH--HhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 54332 22222222 124578899999999998888875
Q ss_pred ---cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 ---GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.++|...+++|+.++..+.+++.+. + -.++|++||........
T Consensus 80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~-------- 150 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM-------- 150 (251)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccC--------
Confidence 47999999996443 355678889999999999998876553 3 46999999864321110
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
+....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+........ -.. .+... ...++.
T Consensus 151 -------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~-~~~~~-~~~pl~ 214 (251)
T d1vl8a_ 151 -------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEK-LDYML-KRIPLG 214 (251)
T ss_dssp -------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHH-HHHHH-HTCTTS
T ss_pred -------------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC-HHH-HHHHH-hcCCCC
Confidence 11246999999999999999877 489999999999988753322111 011 11111 112233
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++++|
T Consensus 215 -----R~~~pedvA~~v~fL 229 (251)
T d1vl8a_ 215 -----RTGVPEDLKGVAVFL 229 (251)
T ss_dssp -----SCBCGGGGHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHH
Confidence 678899999999886
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.93 E-value=1.6e-24 Score=170.82 Aligned_cols=207 Identities=14% Similarity=0.122 Sum_probs=148.2
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++.|++|||||++.||++++++|+++|++|++++| ++...+ ..+.+.. .+..++++.+|+++.++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r-~~~~l~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLEIWRE---KGLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCCceEEEeecCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 543322 2222222 34578899999999998877764
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+|+.... ...+++...+++|+.++..+.+++.+. + ..++|++||.+...+.+
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~------- 151 (258)
T d1ae1a_ 80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP------- 151 (258)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT-------
T ss_pred HhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccc-------
Confidence 26899999987543 345678899999999999988766543 4 57999999976543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC---cHHHHHHHHhcCc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG---SVRGTLAMVMGNR 218 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~---~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ .-.........
T Consensus 152 ---------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-- 214 (258)
T d1ae1a_ 152 ---------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK-- 214 (258)
T ss_dssp ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH--
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhc--
Confidence 2246999999999999999877 489999999999998754333211 11111112111
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.++. .+...+|+|+++.+|+
T Consensus 215 ~plg-----R~~~pediA~~v~fL~ 234 (258)
T d1ae1a_ 215 TPMG-----RAGKPQEVSALIAFLC 234 (258)
T ss_dssp STTC-----SCBCHHHHHHHHHHHH
T ss_pred CCCC-----CCcCHHHHHHHHHHHh
Confidence 2223 6899999999998863
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.93 E-value=1.7e-24 Score=170.85 Aligned_cols=209 Identities=15% Similarity=0.149 Sum_probs=151.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||+++++.|++.|++|++++| +.+..+..... ....+.++..+.+|++|+++++++++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~--~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAEAS--VREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--HHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 54433222211 12235678999999999998888876
Q ss_pred --cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 --GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 --~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++||+||.... .+.+.|...+++|+.++..+.+++.+. + -.+||++||.+...+.+
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~-------- 150 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPP-------- 150 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCT--------
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCc--------
Confidence 47999999986432 345668889999999999988876543 3 46999999976543331
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCC------------CCCCcHHHH
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICP------------QLAGSVRGT 210 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~------------~~~~~~~~~ 210 (243)
...+|+.+|.+.+.+.+.++.+. ||+++.+.||.|-.+.... .........
T Consensus 151 --------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (260)
T d1zema1 151 --------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVV 216 (260)
T ss_dssp --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHH
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHH
Confidence 22469999999999999998774 8999999999998863110 000111111
Q ss_pred HHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 211 LAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+..... .++. .+..++|+|++++||+
T Consensus 217 ~~~~~~~-~Pl~-----R~g~pedvA~~v~fL~ 243 (260)
T d1zema1 217 AQQMIGS-VPMR-----RYGDINEIPGVVAFLL 243 (260)
T ss_dssp HHHHHHT-STTS-----SCBCGGGSHHHHHHHH
T ss_pred HHHHHhc-CCCC-----CCcCHHHHHHHHHHHh
Confidence 1111111 1222 6788999999998863
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.92 E-value=3.9e-25 Score=177.42 Aligned_cols=195 Identities=15% Similarity=0.037 Sum_probs=140.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc--ccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG--CTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 83 (243)
|||||||||||||++|++.|.++|+.| ++.+++. .+.+|++|.+.+.+++++ +|+||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~--------------------~~~~Dl~~~~~~~~~i~~~~~D~Vi 59 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK--------------------EFCGDFSNPKGVAETVRKLRPDVIV 59 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS--------------------SSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc--------------------cccCcCCCHHHHHHHHHHcCCCEEE
Confidence 379999999999999999999888654 4555232 134799999999999974 69999
Q ss_pred EeeeccCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 84 HVAAPIDI-HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 84 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
|+||.... ...+.....++.|+.++.++++++++.+ .+++++||+.+++.. ...+.+|..+.. |.+
T Consensus 60 h~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~--~~~~~~E~~~~~---------p~~ 126 (298)
T d1n2sa_ 60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGT--GDIPWQETDATS---------PLN 126 (298)
T ss_dssp ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCC--TTCCBCTTSCCC---------CSS
T ss_pred EecccccccccccCccccccccccccccchhhhhccc--cccccccccccccCC--CCCCCccccccC---------CCc
Confidence 99997553 2223345889999999999999999888 578888888766543 445677776543 557
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh-cCccccccccCcCceeHHHHHHhhhc
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM-GNREEYSMLLNISMVHIDDVARAHIF 241 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~~ 241 (243)
.|+.+|..+|..++.. .....++|++..++..... ....+..... ........+..++++|++|+++++..
T Consensus 127 ~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 198 (298)
T d1n2sa_ 127 VYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAH 198 (298)
T ss_dssp HHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred hHhhhhhhhhhhHHhh----hcccccccccceeeccCCc----cchhhhhhhcccceeecccceeecccccchHHHHHHH
Confidence 7999999999988763 3456667766666543221 2233333333 33334444667899999999998764
Q ss_pred c
Q 026091 242 F 242 (243)
Q Consensus 242 ~ 242 (243)
+
T Consensus 199 ~ 199 (298)
T d1n2sa_ 199 A 199 (298)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.92 E-value=1.1e-24 Score=171.87 Aligned_cols=206 Identities=21% Similarity=0.205 Sum_probs=151.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc-hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR-DLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
+|++|||||++.||++++++|+++|++|++.+| +++..+ ..+.+.. .+.++.++++|++|+++++++++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~l~~---~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999 543332 2233322 35578999999999999988876
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEEecceeeecCCCCcccccC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS------GTVKRVVYTSSASTVHFSGKDVDMLDE 145 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~e 145 (243)
++|++|||||.... .+.+++...+++|+.++.++.+++.+. + ..++|++||.....+.+
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~-------- 148 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV-------- 148 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCT--------
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccccccc--------
Confidence 47999999987543 345678899999999999999987652 3 46899999976543321
Q ss_pred CCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCC-------CCCcHHHHHHHHh
Q 026091 146 TFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQ-------LAGSVRGTLAMVM 215 (243)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~-------~~~~~~~~~~~~~ 215 (243)
....|+.+|.+.+.+.+.++.+. ||+++.+.||.+-.+..... .....+...+...
T Consensus 149 --------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~ 214 (257)
T d2rhca1 149 --------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT 214 (257)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH
Confidence 22469999999999999999884 79999999999987632111 0000111111111
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
...++. .+...+|+|+++++|+
T Consensus 215 -~~~Plg-----R~~~pedia~~v~fL~ 236 (257)
T d2rhca1 215 -ARVPIG-----RYVQPSEVAEMVAYLI 236 (257)
T ss_dssp -TTSTTS-----SCBCHHHHHHHHHHHT
T ss_pred -hcCCCC-----CCcCHHHHHHHHHHHh
Confidence 112222 6889999999999874
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.92 E-value=2.4e-24 Score=169.16 Aligned_cols=166 Identities=18% Similarity=0.159 Sum_probs=132.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|+++|++|++.+| +.+...... .+. +.++.++++|++|+++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEEGAATA--REL---GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 443322211 122 3578999999999999988875
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||.... ...+.+...+++|+.++..+.+++.+ .+ -.+||++||.+...+.+
T Consensus 77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~--------- 146 (254)
T d1hdca_ 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA--------- 146 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccccc---------
Confidence 47999999987543 34567888999999999999887654 34 57999999976543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+
T Consensus 147 -------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~ 187 (254)
T d1hdca_ 147 -------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence 2246999999999999999877 4899999999999876
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.92 E-value=1e-24 Score=171.79 Aligned_cols=203 Identities=17% Similarity=0.179 Sum_probs=147.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
|.++||||++.||++++++|+++|++|++.+| +++..+. ...+.. .+.++..+++|++|+++++++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~i~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVASEINQ---AGGHAVAVKVDVSDRDQVFAAVEQARKTLG 77 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 55799999999999999999999999999999 5443322 222222 35678999999999999888875
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.|...+++|+.++.++.+++.+ .++..+++++||.+...+.+
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------- 146 (255)
T d1gega_ 78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------- 146 (255)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc-----------
Confidence 47999999986443 34566888999999999998877543 34346799999976443221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHh----------
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVM---------- 215 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~---------- 215 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+..... .........
T Consensus 147 -----------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~~~~~~~~ 211 (255)
T d1gega_ 147 -----------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI----DRQVSEAAGKPLGYGTAEF 211 (255)
T ss_dssp -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH----HHHHHHHHTCCTTHHHHHH
T ss_pred -----------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhh----hhhhHhhhcccchhHHHHH
Confidence 2246999999999999999877 489999999999987632111 010000000
Q ss_pred cCccccccccCcCceeHHHHHHhhhccC
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
....++. .+...+|+|+++++|+
T Consensus 212 ~~~~pl~-----R~~~peevA~~v~fL~ 234 (255)
T d1gega_ 212 AKRITLG-----RLSEPEDVAACVSYLA 234 (255)
T ss_dssp HTTCTTC-----SCBCHHHHHHHHHHHH
T ss_pred HhcCCCC-----CCcCHHHHHHHHHHHh
Confidence 0111222 6889999999998863
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.92 E-value=7.1e-25 Score=171.43 Aligned_cols=201 Identities=15% Similarity=0.137 Sum_probs=150.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhc-------
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIA------- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 77 (243)
+.||||||++.||++++++|++.|++|++..+++.+..+.... +.. .+.++.++++|++|+++++++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999998877646544333322 222 24578899999999999888876
Q ss_pred cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.|...+++|+.++.++.+++.+ .+ -.+||++||.+...+.+
T Consensus 79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~----------- 146 (244)
T d1edoa_ 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI----------- 146 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----------
T ss_pred CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCC-----------
Confidence 47999999987543 34567888999999999998776654 34 56999999987553331
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLL 225 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+...... ....+... ...++.
T Consensus 147 -----------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~----~~~~~~~~-~~~pl~--- 207 (244)
T d1edoa_ 147 -----------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG----EDMEKKIL-GTIPLG--- 207 (244)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC----HHHHHHHH-TSCTTC---
T ss_pred -----------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh----HHHHHHHH-hcCCCC---
Confidence 2246999999999999999887 4899999999999876432221 11222222 222233
Q ss_pred CcCceeHHHHHHhhhcc
Q 026091 226 NISMVHIDDVARAHIFF 242 (243)
Q Consensus 226 ~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+++.+|
T Consensus 208 --R~~~p~dvA~~v~fL 222 (244)
T d1edoa_ 208 --RTGQPENVAGLVEFL 222 (244)
T ss_dssp --SCBCHHHHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHH
Confidence 688999999999876
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.92 E-value=4.5e-26 Score=184.05 Aligned_cols=202 Identities=16% Similarity=0.122 Sum_probs=136.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+++||||||||||||++++++|+++||+|++++|+..... .....+... ...+++++++|+.|.+.+.+.+++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~--~~~~v~~v~~d~~d~~~~~~~~~~~~~~ 79 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF--KQLGAKLIEASLDDHQRLVDALKQVDVV 79 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH--HTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh--ccCCcEEEEeecccchhhhhhccCcchh
Confidence 3568999999999999999999999999999999432211 111111111 1347999999999999999999999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
+|+++..... .|..++.++++++++.+ ..++++.||.+..... +..+ ..+..
T Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~--------~~~~---------~~~~~ 131 (312)
T d1qyda_ 80 ISALAGGVLS----------HHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI--------MEHA---------LQPGS 131 (312)
T ss_dssp EECCCCSSSS----------TTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS--------CCCC---------CSSTT
T ss_pred hhhhhhcccc----------cchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC--------cccc---------cchhh
Confidence 9998754331 24445678888898888 6788888875432211 1111 11334
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
.|...|..++. +....+++++++||+.+||+........... .........+. +++.++|+|++|+|++++
T Consensus 132 ~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 204 (312)
T d1qyda_ 132 ITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGH---MMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI 204 (312)
T ss_dssp HHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCC---SSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred hhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHHHH---hhhcccccccccccccccceeeHHHHHHHHH
Confidence 46666655555 4455799999999999999754332111100 01112222222 367889999999999987
Q ss_pred cc
Q 026091 241 FF 242 (243)
Q Consensus 241 ~~ 242 (243)
.+
T Consensus 205 ~~ 206 (312)
T d1qyda_ 205 KS 206 (312)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.4e-24 Score=169.75 Aligned_cols=210 Identities=18% Similarity=0.139 Sum_probs=148.0
Q ss_pred CC-CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 1 ME-EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 1 m~-~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
|+ .+.|++|||||++.||+++++.|+++|++|++..| +.+..+.+ +.+.. .....++.++++|++++++++++++
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r-~~~~l~~~~~~l~~-~~~~~~~~~~~~Dls~~~~v~~~v~~ 82 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKS-AGYPGTLIPYRCDLSNEEDILSMFSA 82 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH-TTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh-cCCCceEEEEEccCCCHHHHHHHHHH
Confidence 54 46799999999999999999999999999999999 55433332 22222 1223478899999999998888876
Q ss_pred ------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcC-CccEEEEEecceeeecCCCCcc
Q 026091 78 ------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSG-TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
++|++||+||.... .+.+.+...+++|+.++.++.+.+. +.+ .-.++|++||.+.....+.
T Consensus 83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~--- 159 (257)
T d1xg5a_ 83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL--- 159 (257)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC---
T ss_pred HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC---
Confidence 47999999987543 3456678899999999988877653 333 1368999999764322211
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG 216 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~ 216 (243)
+....|+.+|...+.+.+.++.+ ++|+++.+.||.+-.+................
T Consensus 160 -----------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~--- 219 (257)
T d1xg5a_ 160 -----------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT--- 219 (257)
T ss_dssp -----------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---
T ss_pred -----------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc---
Confidence 01235999999999999988754 58999999999887653211111111111111
Q ss_pred CccccccccCcCceeHHHHHHhhhcc
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+. ..++..+|+|+++++|
T Consensus 220 --~~~-----~r~~~pedvA~~v~fL 238 (257)
T d1xg5a_ 220 --YEQ-----MKCLKPEDVAEAVIYV 238 (257)
T ss_dssp --HC--------CBCHHHHHHHHHHH
T ss_pred --CCC-----CCCcCHHHHHHHHHHH
Confidence 112 2678999999999876
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.92 E-value=5.2e-25 Score=173.13 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=146.9
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||++++++|+++|++|++.+| +++..+.+. .+. +.+..++++|++|.++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~-~~~~~~~~~--~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAAGQQLA--AEL---GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHH--HHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh---CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999 554332222 111 3478899999999988888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.++|...+++|+.++..+.+++.+.- +-.+||++||.+...+.+
T Consensus 78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~----------- 146 (253)
T d1hxha_ 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE----------- 146 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-----------
T ss_pred hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc-----------
Confidence 47999999997543 3446688899999999998888766531 136899999976543221
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCC-cHHHHHHHHhcCccccc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAG-SVRGTLAMVMGNREEYS 222 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+.+.++.+ ++|+++.+.||.+..+......+. ..+ .........
T Consensus 147 -----------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~---~~~~~~~~~-- 210 (253)
T d1hxha_ 147 -----------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK---EMVLHDPKL-- 210 (253)
T ss_dssp -----------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH---HHHBCBTTT--
T ss_pred -----------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH---HHHHhCccc--
Confidence 2346999999999999888755 359999999999987632111110 000 111111100
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
...-.+...+|+|+++++|
T Consensus 211 -~~~gr~~~pedvA~~v~fL 229 (253)
T d1hxha_ 211 -NRAGRAYMPERIAQLVLFL 229 (253)
T ss_dssp -BTTCCEECHHHHHHHHHHH
T ss_pred -cccCCCCCHHHHHHHHHHH
Confidence 1111578899999999886
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.92 E-value=6.5e-24 Score=168.02 Aligned_cols=211 Identities=17% Similarity=0.158 Sum_probs=144.5
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+| +.+..+. ...+........++.++++|++|.++++++++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 5543322 22233322234468999999999999988876
Q ss_pred ---cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecce-eeecCCCCccc
Q 026091 78 ---GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSAS-TVHFSGKDVDM 142 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~-~~~~~~~~~~~ 142 (243)
++|++||+||.... .+.+.|...+++|+.++..+.+++.+.- .-.++|+++|.. ...+.+
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~----- 156 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP----- 156 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT-----
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC-----
Confidence 47999999986432 1234577899999999999888766531 024666666643 221211
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC--CCcH---HHHHHHH
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL--AGSV---RGTLAMV 214 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~--~~~~---~~~~~~~ 214 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|-.+...... .... .......
T Consensus 157 -----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 219 (264)
T d1spxa_ 157 -----------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM 219 (264)
T ss_dssp -----------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH
T ss_pred -----------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHH
Confidence 1245999999999999999877 4899999999999887543221 0111 1111111
Q ss_pred hcCccccccccCcCceeHHHHHHhhhcc
Q 026091 215 MGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 215 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....+.. .+...+|+|+++++|
T Consensus 220 -~~~~Pl~-----R~g~pedvA~~v~fL 241 (264)
T d1spxa_ 220 -KECVPAG-----VMGQPQDIAEVIAFL 241 (264)
T ss_dssp -HHHCTTS-----SCBCHHHHHHHHHHH
T ss_pred -HhcCCCC-----CCcCHHHHHHHHHHH
Confidence 1112233 688999999999886
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.92 E-value=4.5e-24 Score=169.72 Aligned_cols=212 Identities=14% Similarity=0.096 Sum_probs=150.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
.+.|+++||||++.||++++++|++.|++|++.+| +.+..+. ...+........++..+.+|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 5443322 22233322223478999999999998888876
Q ss_pred ---cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCccccc
Q 026091 78 ---GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
++|++||+||.... .+.+.|...+++|+.++..+.+++.+. ++-.+++++||.+...+.+
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~------- 153 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS------- 153 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT-------
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC-------
Confidence 47999999986422 123457789999999999988876653 2145778777755332221
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc--HHHHHHHHh--cC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS--VRGTLAMVM--GN 217 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~--~~~~~~~~~--~~ 217 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|..+......... ......... ..
T Consensus 154 ---------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (274)
T d1xhla_ 154 ---------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE 218 (274)
T ss_dssp ---------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred ---------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHc
Confidence 1245999999999999999877 4899999999999887433221111 111111111 12
Q ss_pred ccccccccCcCceeHHHHHHhhhcc
Q 026091 218 REEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 218 ~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
..++. .+...+|+|++++||
T Consensus 219 ~iPlg-----R~g~pediA~~v~fL 238 (274)
T d1xhla_ 219 CIPVG-----HCGKPEEIANIIVFL 238 (274)
T ss_dssp TCTTS-----SCBCHHHHHHHHHHH
T ss_pred CCCCC-----CCcCHHHHHHHHHHH
Confidence 23333 688999999999886
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.9e-24 Score=172.48 Aligned_cols=210 Identities=14% Similarity=0.127 Sum_probs=149.6
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh-chhhhhhc-C-CCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK-RDLSFLTN-L-PRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+| +.+.. .....+.. . ...+.++..+++|++|+++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r-~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 36899999999999999999999999999999999 54332 22233322 1 1235578999999999999888876
Q ss_pred -----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceeeecCCCCcccc
Q 026091 78 -----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+|+.... .+.+.+...+++|+.++..+.+++.+. + -.++|++|+... ...
T Consensus 89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~-~~~------- 159 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK-AGF------- 159 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT-TCC-------
T ss_pred HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccc-ccc-------
Confidence 47999999986443 345678889999999999998877654 2 356887766431 111
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+. ||+++.|.||.|..+..........+...+... ...+
T Consensus 160 ---------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~p 223 (297)
T d1yxma1 160 ---------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-QKIP 223 (297)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-GGST
T ss_pred ---------------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHH-hcCC
Confidence 122469999999999999999774 899999999999887543222111110001100 1112
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+...+|+|+++++|+
T Consensus 224 lg-----R~g~pedvA~~v~fL~ 241 (297)
T d1yxma1 224 AK-----RIGVPEEVSSVVCFLL 241 (297)
T ss_dssp TS-----SCBCTHHHHHHHHHHH
T ss_pred CC-----CCcCHHHHHHHHHHHh
Confidence 22 6888999999998863
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.91 E-value=7.5e-24 Score=168.30 Aligned_cols=212 Identities=14% Similarity=0.124 Sum_probs=147.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++.|+++||||++.||++++++|++.|++|++.+| +.+..+. ...+........++..+++|++|+++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999 5543322 22232322234468999999999999888876
Q ss_pred ---cccEEEEeeeccCCC---------CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEec-ceeeecCCCCccc
Q 026091 78 ---GCTGVIHVAAPIDIH---------GKEPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSS-ASTVHFSGKDVDM 142 (243)
Q Consensus 78 ---~~d~vi~~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss-~~~~~~~~~~~~~ 142 (243)
++|++||+||..... ..+.|...+++|+.++..+.+++.+.- +-..+|+++| .+...+.+
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~----- 156 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP----- 156 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC-----
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCC-----
Confidence 479999999875431 112477889999999999988766531 0235666655 33222221
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCC--cHHHHHHHH--h
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAG--SVRGTLAMV--M 215 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~--~~~~~~~~~--~ 215 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.|-.+........ ......... .
T Consensus 157 -----------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~ 219 (272)
T d1xkqa_ 157 -----------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH 219 (272)
T ss_dssp -----------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred -----------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHH
Confidence 2246999999999999999877 489999999999988743322111 111111111 1
Q ss_pred cCccccccccCcCceeHHHHHHhhhcc
Q 026091 216 GNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 216 ~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
....++. .+...+|+|+++++|
T Consensus 220 ~~~~Plg-----R~g~pediA~~v~fL 241 (272)
T d1xkqa_ 220 KECIPIG-----AAGKPEHIANIILFL 241 (272)
T ss_dssp TTTCTTS-----SCBCHHHHHHHHHHH
T ss_pred hcCCCCC-----CCcCHHHHHHHHHHH
Confidence 1223333 688999999999886
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.91 E-value=6.6e-24 Score=168.93 Aligned_cols=208 Identities=20% Similarity=0.212 Sum_probs=148.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+++.|+++||||++.||++++++|+++|++|++++| +.+....+.. + .+.++..+.+|+++.++++++++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~--~---~~~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK-SAERLAELET--D---HGDNVLGIVGDVRSLEDQKQAASRCV 74 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--H---HGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--H---cCCCeeEEecccccHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999 5543322221 1 13478999999999998888875
Q ss_pred ----cccEEEEeeeccCCC------CC----ChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEEecceeeecCCCCcc
Q 026091 78 ----GCTGVIHVAAPIDIH------GK----EPEEVIIQRAVSGTIGILKSCLKSG--TVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~~------~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
.+|++||+||..... .. +.|...+++|+.++..+.+++.+.- +-.++|++||.....+.+
T Consensus 75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~---- 150 (276)
T d1bdba_ 75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG---- 150 (276)
T ss_dssp HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS----
T ss_pred HHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC----
Confidence 479999999864321 11 1367889999999998887665431 025889998865432221
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc--CccEEEEccCceeCCCCCCCCCCcHH------HHHHH
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH--GLDLVTIIPSFVTGPFICPQLAGSVR------GTLAM 213 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--gi~~~~~rp~~i~G~~~~~~~~~~~~------~~~~~ 213 (243)
....|+.+|.+.+.+.+.++.+. +|+++.+.||.|-.+...+....... .....
T Consensus 151 ------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~ 212 (276)
T d1bdba_ 151 ------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADM 212 (276)
T ss_dssp ------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHH
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHH
Confidence 22459999999999999998774 59999999999988754332111100 01111
Q ss_pred HhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 214 VMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 214 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. ....++. .+...+|+|+++++|
T Consensus 213 ~-~~~~Plg-----R~g~peeva~~v~fL 235 (276)
T d1bdba_ 213 L-KSVLPIG-----RMPEVEEYTGAYVFF 235 (276)
T ss_dssp H-TTTCTTS-----SCCCGGGGSHHHHHH
T ss_pred H-HhcCCCC-----CCcCHHHHHHHHHHH
Confidence 1 2223333 688899999998876
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.91 E-value=7.2e-24 Score=165.26 Aligned_cols=192 Identities=11% Similarity=0.094 Sum_probs=144.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCe-------EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYS-------VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
+.||||||++.||++++++|+++|++ |++.+| +.+..+.... +....+.++.++.+|++|+++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r-~~~~l~~~~~--~~~~~g~~~~~~~~Dvt~~~~v~~~~~~ 78 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISL--ECRAEGALTDTITADISDMADVRRLTTH 78 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHH--HHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999999987 788888 5543333221 112235578899999999998888876
Q ss_pred ------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccc
Q 026091 78 ------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+++.+ .+ -.++|++||.+...+.+
T Consensus 79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~----- 152 (240)
T d2bd0a1 79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR----- 152 (240)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCC-----
Confidence 47999999987543 34567888999999999998776654 34 46899999987543331
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+........ .
T Consensus 153 -----------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-------------~ 202 (240)
T d2bd0a1 153 -----------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-------------M 202 (240)
T ss_dssp -----------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-------------T
T ss_pred -----------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-------------h
Confidence 2246999999999999999877 489999999999988754332111 0
Q ss_pred ccccccCcCceeHHHHHHhhhcc
Q 026091 220 EYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
...+...+|+|++++++
T Consensus 203 ------~~~~~~PedvA~~v~~l 219 (240)
T d2bd0a1 203 ------QALMMMPEDIAAPVVQA 219 (240)
T ss_dssp ------GGGSBCHHHHHHHHHHH
T ss_pred ------HhcCCCHHHHHHHHHHH
Confidence 01456789999988775
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.91 E-value=2.9e-24 Score=169.64 Aligned_cols=215 Identities=16% Similarity=0.170 Sum_probs=151.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
|+.+.|++|||||++.||++++++|++.|++|++++|+.....+....+.. ..+.++..+++|++|+++++++++
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK--EFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHH--HHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH--HhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999955433322232221 124578999999999999988875
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++||+||.... .+.+++...+++|+.++.++.+++.+ .+....++..||.......... +.
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~---~~ 159 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS---LN 159 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE---TT
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc---cc
Confidence 47999999986543 34566888999999999888776543 2324567776665432111000 00
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccc
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (243)
..+....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+...... ........ ...++
T Consensus 160 ------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~----~~~~~~~~-~~~pl 222 (260)
T d1h5qa_ 160 ------------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQA-SNIPL 222 (260)
T ss_dssp ------------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHH-HTCTT
T ss_pred ------------cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC----HHHHHHHH-hcCCC
Confidence 0112346999999999999999876 4899999999999887543332 11222221 12223
Q ss_pred ccccCcCceeHHHHHHhhhcc
Q 026091 222 SMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~ 242 (243)
. .+...+|+|+++++|
T Consensus 223 ~-----R~g~pedvA~~v~fL 238 (260)
T d1h5qa_ 223 N-----RFAQPEEMTGQAILL 238 (260)
T ss_dssp S-----SCBCGGGGHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHH
Confidence 3 688999999999886
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.91 E-value=3.9e-24 Score=166.97 Aligned_cols=201 Identities=18% Similarity=0.194 Sum_probs=146.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++.|+++||||++.||+++++.|+++|++|++.+| +.+..... ..+. +.++.++++|++++++++++++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~ 76 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERLLAEA--VAAL---EAEAIAVVADVSDPKAVEAVFAEALEE 76 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHTC---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHc---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 44332221 1222 4578999999999999988876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTV-KRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+|+.... .+.+.+...++.|+.++..+.+++.+...- +.++++||.+.. ..
T Consensus 77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~------------- 142 (241)
T d2a4ka1 77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA------------- 142 (241)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH-------------
T ss_pred hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-cc-------------
Confidence 47999999986443 345667889999999999999987776422 345544543311 11
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccC
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLN 226 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (243)
+....|+.+|.+.|.+.+.++++. |++++++.||.+-.+...... ....+...+. .+..
T Consensus 143 ---------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~----~~~~~~~~~~-~p~~---- 204 (241)
T d2a4ka1 143 ---------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP----PWAWEQEVGA-SPLG---- 204 (241)
T ss_dssp ---------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC----HHHHHHHHHT-STTC----
T ss_pred ---------cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh----HhHHHHHHhC-CCCC----
Confidence 012459999999999999999885 799999999999877533221 1122222222 2233
Q ss_pred cCceeHHHHHHhhhcc
Q 026091 227 ISMVHIDDVARAHIFF 242 (243)
Q Consensus 227 ~~~i~v~Dva~a~~~~ 242 (243)
.+..++|+|+++.+|
T Consensus 205 -r~~~p~dva~~v~fL 219 (241)
T d2a4ka1 205 -RAGRPEEVAQAALFL 219 (241)
T ss_dssp -SCBCHHHHHHHHHHH
T ss_pred -CCcCHHHHHHHHHHH
Confidence 688999999999886
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.8e-24 Score=168.40 Aligned_cols=207 Identities=15% Similarity=0.074 Sum_probs=144.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|++|||||++.||++++++|+++|++|++++| +.+.... ...+.. ...+.++.++++|++|+++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHE-QFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTT-TSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH-hcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999 5433322 222221 1124578999999999999888875
Q ss_pred --cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc----C--CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS----G--TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+||.... +++...+++|+.++.++.+.+.+. + ...+||++||.+...+.+
T Consensus 80 ~G~iDilVnnAg~~~~---~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~------------ 144 (254)
T d2gdza1 80 FGRLDILVNNAGVNNE---KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------------ 144 (254)
T ss_dssp HSCCCEEEECCCCCCS---SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------
T ss_pred cCCcCeeccccccccc---ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC------------
Confidence 47999999998654 567899999999888887765543 1 125799999976543321
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHH--HHH---HcCccEEEEccCceeCCCCCCCCCCcHH----HHHHHHhcCccc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALE--FAE---EHGLDLVTIIPSFVTGPFICPQLAGSVR----GTLAMVMGNREE 220 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~--~~~---~~gi~~~~~rp~~i~G~~~~~~~~~~~~----~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+. ++. .+||+++.+.||.|-.+........... ...... ....+
T Consensus 145 ----------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p 213 (254)
T d2gdza1 145 ----------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI-KDMIK 213 (254)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHH-HHHHH
T ss_pred ----------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHH-HhcCC
Confidence 224699999999999875 343 3589999999999987632211100000 000000 01111
Q ss_pred cccccCcCceeHHHHHHhhhccC
Q 026091 221 YSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
+. .+...+|+|+++++|+
T Consensus 214 ~~-----r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 214 YY-----GILDPPLIANGLITLI 231 (254)
T ss_dssp HH-----CCBCHHHHHHHHHHHH
T ss_pred CC-----CCcCHHHHHHHHHHHH
Confidence 22 5788999999998863
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=3.3e-23 Score=163.26 Aligned_cols=206 Identities=15% Similarity=0.105 Sum_probs=143.8
Q ss_pred CCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 3 EEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
++.|++|||||+| .||++++++|++.|++|++..| +++.......+.. .......+++|++|+++++++++
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~-~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAE---ALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHH---HTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-cHHHHHHHHHhhh---ccCcccccccccCCHHHHHHHHHHHH
Confidence 3679999999998 7999999999999999988887 4433333332222 13467889999999998888875
Q ss_pred ----cccEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~ 143 (243)
++|++||+|+.... .+.+++...+++|+.++..+.+++...- +-.++|++||.....+.+
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~------ 155 (256)
T d1ulua_ 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------ 155 (256)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------
T ss_pred HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC------
Confidence 47999999986321 2234566788999999999998876642 125899999976543321
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ ....+... ...+
T Consensus 156 ----------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~--~~~~~~~~-~~~p 216 (256)
T d1ulua_ 156 ----------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF--TKMYDRVA-QTAP 216 (256)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C--HHHHHHHH-HHST
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh--HHHHHHHH-hcCC
Confidence 2356999999999999999887 489999999999988754332111 11111111 1122
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+. .+...+|+|+++++|
T Consensus 217 l~-----R~~~pedvA~~v~fL 233 (256)
T d1ulua_ 217 LR-----RNITQEEVGNLGLFL 233 (256)
T ss_dssp TS-----SCCCHHHHHHHHHHH
T ss_pred CC-----CCcCHHHHHHHHHHH
Confidence 33 688999999999886
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.90 E-value=1.2e-24 Score=174.73 Aligned_cols=196 Identities=18% Similarity=0.217 Sum_probs=132.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhc--hhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKR--DLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+|||||||||||||++++++|++.|++|++++|+...... ....+... ...+++++.+|+.+...+.+.+++++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF--KASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH--HTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh--ccCCcEEEEeecccchhhhhhhhhceee
Confidence 5799999999999999999999999999999995432211 11111111 1347899999999999999999999999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
+|+++.... .++.++++++++.+ ++++++.||...... +.... .+..
T Consensus 81 i~~~~~~~~--------------~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~---------~~~~~---------~~~~ 127 (307)
T d1qyca_ 81 ISTVGSLQI--------------ESQVNIIKAIKEVG-TVKRFFPSEFGNDVD---------NVHAV---------EPAK 127 (307)
T ss_dssp EECCCGGGS--------------GGGHHHHHHHHHHC-CCSEEECSCCSSCTT---------SCCCC---------TTHH
T ss_pred eeccccccc--------------chhhHHHHHHHHhc-cccceeeeccccccc---------ccccc---------cccc
Confidence 999865332 23457778888888 888888887532211 11110 1112
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc--cccCcCceeHHHHHHhhh
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS--MLLNISMVHIDDVARAHI 240 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~ 240 (243)
.+...+...+..+ .+.+++++++||+.+||+......... .....+....+. .++.++++|++|+|++++
T Consensus 128 ~~~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 199 (307)
T d1qyca_ 128 SVFEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 199 (307)
T ss_dssp HHHHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred ccccccccccchh----hccCCCceecccceecCCCccchhhhh----hhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence 3555555555444 457999999999999998543321110 011122222222 377899999999999998
Q ss_pred ccC
Q 026091 241 FFT 243 (243)
Q Consensus 241 ~~~ 243 (243)
.++
T Consensus 200 ~~l 202 (307)
T d1qyca_ 200 KAV 202 (307)
T ss_dssp TTS
T ss_pred HHh
Confidence 763
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=2.4e-23 Score=161.83 Aligned_cols=195 Identities=15% Similarity=0.101 Sum_probs=143.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~v 82 (243)
+.|++|||||++.||++++++|++.|++|++.+| +.+.. + . ...+++.+|+++. +.+.+-+.++|++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r-~~~~l---~---~-----~~~~~~~~Dv~~~~~~~~~~~g~iD~l 70 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NEELL---K---R-----SGHRYVVCDLRKDLDLLFEKVKEVDIL 70 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHH---H---H-----TCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHH---H---h-----cCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence 5799999999999999999999999999999999 54322 1 1 1457788999764 5555566679999
Q ss_pred EEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCCchhh
Q 026091 83 IHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDY 153 (243)
Q Consensus 83 i~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~ 153 (243)
||+||.... .+.+++...+++|+.++..+.+++.+ .+ -.++|++||.......
T Consensus 71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~----------------- 132 (234)
T d1o5ia_ 71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI----------------- 132 (234)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------------
T ss_pred EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccc-----------------
Confidence 999986433 34566778899999998888776544 34 4689999987543222
Q ss_pred hhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCce
Q 026091 154 IRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMV 230 (243)
Q Consensus 154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (243)
+....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+........ ...+... ...++. .+.
T Consensus 133 -----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~---~~~~~~~-~~~pl~-----R~~ 198 (234)
T d1o5ia_ 133 -----ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE---EKKKQVE-SQIPMR-----RMA 198 (234)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH---HHHHHHH-TTSTTS-----SCB
T ss_pred -----cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH---HHHHHHH-hcCCCC-----CCc
Confidence 12246999999999999999877 489999999999988753222111 1112221 223333 789
Q ss_pred eHHHHHHhhhcc
Q 026091 231 HIDDVARAHIFF 242 (243)
Q Consensus 231 ~v~Dva~a~~~~ 242 (243)
..+|+|+++.+|
T Consensus 199 ~pediA~~v~fL 210 (234)
T d1o5ia_ 199 KPEEIASVVAFL 210 (234)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999886
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.5e-23 Score=163.69 Aligned_cols=171 Identities=16% Similarity=0.113 Sum_probs=133.4
Q ss_pred CCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 2 EEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 2 ~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
+..+|+|+||||++.||++++++|+++|++|++++| +.+..+. ...+.. .+.++..+.+|++|+++++++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r-~~~~l~~~~~~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~ 79 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAKCKG---LGAKVHTFVVDCSNREDIYSSAKKVK 79 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 346899999999999999999999999999999999 5543322 222222 35689999999999999888876
Q ss_pred ----cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCccccc
Q 026091 78 ----GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLD 144 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 144 (243)
.+|++|||||.... ...+.+...+++|+.++.++.+.+.+ .+ -.+||++||.++..+.+
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~------- 151 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP------- 151 (244)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH-------
T ss_pred HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCC-------
Confidence 47999999997554 22345678999999999988776544 34 56899999987543321
Q ss_pred CCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH------cCccEEEEccCceeCCCC
Q 026091 145 ETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE------HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 145 e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~gi~~~~~rp~~i~G~~~ 199 (243)
....|+.||.+.+.+.+.++.+ .|++++.+.||.|-.+..
T Consensus 152 ---------------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~ 197 (244)
T d1yb1a_ 152 ---------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI 197 (244)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh
Confidence 1245999999999999998865 379999999999987643
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.90 E-value=1.1e-22 Score=161.55 Aligned_cols=213 Identities=15% Similarity=0.056 Sum_probs=151.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+++|++|||||++.||++++++|++.|++|++.+|++.+..+..... ....+.++.++++|++|++++.++++
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~--~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA--IKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHH--HHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999998555433222211 11235578999999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
++|++||+++.... ...+.+...++.|+.++..+.+++.+.- +-+++++++|........
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~------------ 161 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------ 161 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------------
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc------------
Confidence 47999999986543 3456677889999999999999888753 134788887754221110
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCC-------C-CCCcHHHHHHHHhcCc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICP-------Q-LAGSVRGTLAMVMGNR 218 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~-------~-~~~~~~~~~~~~~~~~ 218 (243)
+...+|+.+|.+.+.+.+.++.+ +||+++.|.||.+-++.... . .........+......
T Consensus 162 ---------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (272)
T d1g0oa_ 162 ---------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW 232 (272)
T ss_dssp ---------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS
T ss_pred ---------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHcc
Confidence 12346999999999999999877 48999999999998752110 0 0111111111111122
Q ss_pred cccccccCcCceeHHHHHHhhhccC
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.++. .+...+|+|+++++|+
T Consensus 233 ~Plg-----R~~~peevA~~v~fL~ 252 (272)
T d1g0oa_ 233 SPLR-----RVGLPIDIARVVCFLA 252 (272)
T ss_dssp CTTC-----SCBCHHHHHHHHHHHH
T ss_pred CCCC-----CCcCHHHHHHHHHHHh
Confidence 2233 7899999999998873
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.90 E-value=3e-23 Score=163.00 Aligned_cols=170 Identities=15% Similarity=0.115 Sum_probs=132.4
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC-ChhhHHHHhc--
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN-NPESFDAAIA-- 77 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~-- 77 (243)
|..+.|+||||||++.||+.++++|+++|++|+++.|+.. .......+... ....++.++.+|++ +.++++++++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAI-NPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHH-CTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhh-CCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence 7778999999999999999999999999999999999544 33333332221 12457899999997 5556666654
Q ss_pred -----cccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEEecceeeecCCCCcccccCC
Q 026091 78 -----GCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKS------GTVKRVVYTSSASTVHFSGKDVDMLDET 146 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~e~ 146 (243)
++|++||+||... .+.++..+++|+.++.++.+++.+. +...+||++||...+.+.+
T Consensus 79 ~~~~g~iDilvnnAG~~~---~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~--------- 146 (254)
T d1sbya1 79 FDQLKTVDILINGAGILD---DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH--------- 146 (254)
T ss_dssp HHHHSCCCEEEECCCCCC---TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---------
T ss_pred HHHcCCCCEEEeCCCCCC---HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC---------
Confidence 5899999999654 3778899999999999998866553 1235799999977543321
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCC
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~ 197 (243)
....|+.+|.+...+.+.++.+ +||+++.+.||.|.++
T Consensus 147 -------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 147 -------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp -------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 2246999999999999998876 4899999999999987
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.90 E-value=9e-23 Score=160.96 Aligned_cols=211 Identities=18% Similarity=0.083 Sum_probs=150.3
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+.+|++|||||++.||++++++|++.|++|++..|++....+...... ...+.++..+.+|++|++++.++++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~--~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL--KKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHH--HHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999988775654433322221 1235578999999999998888876
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeee-cCCCCcccccCCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVH-FSGKDVDMLDETFW 148 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~-~~~~~~~~~~e~~~ 148 (243)
++|++||+||.... .+.+.+...+++|+.++.++++.+.+.- +-++++.++|..... +.+
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~----------- 150 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP----------- 150 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC-----------
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC-----------
Confidence 47999999997543 3456677899999999999988877752 124666666543221 111
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC---------CCCCCCcHHHHHHHHhc
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI---------CPQLAGSVRGTLAMVMG 216 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~---------~~~~~~~~~~~~~~~~~ 216 (243)
....|+.+|.+.+.+.+.++.+ +||+++.|.||++..+.. ..........+.+....
T Consensus 151 -----------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (259)
T d1ja9a_ 151 -----------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN 219 (259)
T ss_dssp -----------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHh
Confidence 1235999999999999999877 489999999999986521 11111222333333322
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.. ++. .+...+|+|+++++|+
T Consensus 220 ~~-pl~-----R~g~p~eVa~~v~fL~ 240 (259)
T d1ja9a_ 220 MN-PLK-----RIGYPADIGRAVSALC 240 (259)
T ss_dssp TS-TTS-----SCBCHHHHHHHHHHHH
T ss_pred CC-CCC-----CCcCHHHHHHHHHHHh
Confidence 22 222 6899999999998863
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.5e-22 Score=158.25 Aligned_cols=206 Identities=14% Similarity=0.142 Sum_probs=149.6
Q ss_pred CC-CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 1 ME-EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 1 m~-~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
|. ++.|++|||||++.||+++++.|+++|++|++.+| +++.. +.+.+ ..+++....|+.+.+.++...+
T Consensus 1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r-~~~~l---~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~ 72 (245)
T d2ag5a1 1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NESKL---QELEK----YPGIQTRVLDVTKKKQIDQFANEV 72 (245)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---GGGGG----STTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHH---HHHHh----ccCCceeeeecccccccccccccc
Confidence 55 57899999999999999999999999999999999 55333 22222 2468889999998877776654
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEEecceee-ecCCCCcccccCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS----GTVKRVVYTSSASTV-HFSGKDVDMLDET 146 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~Ss~~~~-~~~~~~~~~~~e~ 146 (243)
++|++||+||.... .+.+.+...+++|+.++..+.+.+.+. + ..++|++||.... .+.
T Consensus 73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~---------- 141 (245)
T d2ag5a1 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV---------- 141 (245)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC----------
T ss_pred ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCc----------
Confidence 58999999987554 345678889999999999998876642 3 5689999986421 111
Q ss_pred CCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC--CCcHHHHHHHHhcCcccc
Q 026091 147 FWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL--AGSVRGTLAMVMGNREEY 221 (243)
Q Consensus 147 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~ 221 (243)
+....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-++...... ........+.+.. ..++
T Consensus 142 ------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~pl 208 (245)
T d2ag5a1 142 ------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-RQKT 208 (245)
T ss_dssp ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-TCTT
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh-cCCC
Confidence 12356999999999999999987 4899999999999887322110 0001111122211 1222
Q ss_pred ccccCcCceeHHHHHHhhhccC
Q 026091 222 SMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 222 ~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
. .+...+|+|+++.+|+
T Consensus 209 ~-----R~~~pedva~~v~fL~ 225 (245)
T d2ag5a1 209 G-----RFATAEEIAMLCVYLA 225 (245)
T ss_dssp S-----SCEEHHHHHHHHHHHH
T ss_pred C-----CCcCHHHHHHHHHHHh
Confidence 2 6899999999998863
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.89 E-value=4.7e-22 Score=159.72 Aligned_cols=209 Identities=15% Similarity=0.117 Sum_probs=141.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------ 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------ 77 (243)
++|+++||||+|.||++++++|++.|++|++++|+.....+....+... .+.++..+.+|+++.++++++++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--cCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 5699999999999999999999999999999999443222222223221 24578899999999998887765
Q ss_pred -cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 -GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
++|++||+||.... ...+.+...+..|......+...+.. ......++.+||.+.....+
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~---------- 171 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------- 171 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT----------
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc----------
Confidence 47999999987544 22344556777787777766554332 22145677777754332221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSML 224 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (243)
....|+.+|.+.+.+.+.++.+ +||++++|.||.+..+.........-.. ..... ...+..
T Consensus 172 ------------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~-~~~pl~-- 235 (294)
T d1w6ua_ 172 ------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-EKEMI-GRIPCG-- 235 (294)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-HHHHH-TTCTTS--
T ss_pred ------------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHH-HHHHh-hcCCCC--
Confidence 2245999999999999999877 4899999999999887644332211111 11111 112222
Q ss_pred cCcCceeHHHHHHhhhccC
Q 026091 225 LNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 225 ~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+|+
T Consensus 236 ---R~~~pediA~~v~fL~ 251 (294)
T d1w6ua_ 236 ---RLGTVEELANLAAFLC 251 (294)
T ss_dssp ---SCBCHHHHHHHHHHHT
T ss_pred ---CCCCHHHHHHHHHHHh
Confidence 6889999999998874
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.8e-22 Score=159.31 Aligned_cols=174 Identities=22% Similarity=0.203 Sum_probs=129.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC--Cchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhcc---
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS--DPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAG--- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~--~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--- 78 (243)
.|.||||||+++||+++++.|++.|++|+.+.+. +.+....+.. .......+.++..+.+|++|.+++.++++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 4678999999999999999999999876555431 3322222222 222333466899999999999999998763
Q ss_pred --ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCcccccCCC
Q 026091 79 --CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 79 --~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
+|++||+|+.... .+.+.+...+++|+.++.++.+++. +.+ -.+||++||.++..+.+
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~---------- 150 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP---------- 150 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCC----------
Confidence 7999999986543 3456678899999999998877654 445 57999999986543331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICP 201 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~ 201 (243)
....|+.+|.+.+.+.+.++.+ +|++++.+.||.+-.+....
T Consensus 151 ------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~ 195 (285)
T d1jtva_ 151 ------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK 195 (285)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH
Confidence 2346999999999999999877 48999999999998875443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=5.2e-23 Score=162.40 Aligned_cols=171 Identities=16% Similarity=0.104 Sum_probs=130.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH---cCCeEEEEEeCCchhhchhh-hhhcCCCCCCCeEEEecCCCChhhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD---HGYSVRTTVRSDPEQKRDLS-FLTNLPRASERLQIFNADLNNPESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 77 (243)
++|+++||||+++||++++++|++ +|++|++++| +.+..+.+. .+.. ...+.++.++++|++|+++++++++
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r-~~~~l~~~~~~l~~-~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGA-QQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHH-HCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEEC-CHHHHHHHHHHHHh-hcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 578999999999999999999986 6999999999 554333322 2221 1124478999999999998888864
Q ss_pred ---------cccEEEEeeeccCC--------CCCChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEEEEecceeeec
Q 026091 78 ---------GCTGVIHVAAPIDI--------HGKEPEEVIIQRAVSGTIGILKSCLKSG-----TVKRVVYTSSASTVHF 135 (243)
Q Consensus 78 ---------~~d~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~Ss~~~~~~ 135 (243)
..|++||+||.... .+.+.+...+++|+.++..+.+++.+.- ...+||++||.+...+
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 25789999986432 2224577899999999999999887652 1348999999765433
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-cCccEEEEccCceeCCC
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-HGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~gi~~~~~rp~~i~G~~ 198 (243)
.+ ....|+.+|.+.+.+.+.++.+ +||+++.+.||.|.++.
T Consensus 163 ~~----------------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~ 204 (259)
T d1oaaa_ 163 YK----------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM 204 (259)
T ss_dssp CT----------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred Cc----------------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence 21 2246999999999999999866 48999999999998873
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=2.6e-22 Score=157.62 Aligned_cols=199 Identities=12% Similarity=0.045 Sum_probs=141.9
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------cc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------GC 79 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~ 79 (243)
++|||||++.||++++++|++.|++|.+.+| +.+..+.+..+. ..++++|+.|.++++++++ ++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r-~~~~~~~~~~~~--------~~~~~~dv~~~~~~~~~~~~~~~~~G~i 72 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFA--------ETYPQLKPMSEQEPAELIEAVTSAYGQV 72 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHH--------HHCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHhhh--------CcEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999998 444333333221 2345688888877777765 47
Q ss_pred cEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCCcccccCCCCC
Q 026091 80 TGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKDVDMLDETFWS 149 (243)
Q Consensus 80 d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~ 149 (243)
|++|||||.... .+.+++...+++|+.++.++.+++.+ .+ -.+||++||.+...+.+
T Consensus 73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~------------ 139 (252)
T d1zmta1 73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK------------ 139 (252)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT------------
T ss_pred CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccc------------
Confidence 999999985422 23456778899999999888876544 34 46999999976443221
Q ss_pred chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc----HHHHHHHHhcCccccc
Q 026091 150 DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS----VRGTLAMVMGNREEYS 222 (243)
Q Consensus 150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~----~~~~~~~~~~~~~~~~ 222 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+......... .+...+... ...++.
T Consensus 140 ----------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~-~~~pl~ 208 (252)
T d1zmta1 140 ----------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK-KVTALQ 208 (252)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH-HHSSSS
T ss_pred ----------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHH-hcCCCC
Confidence 1246999999999999999877 4899999999999987644332110 011111111 112233
Q ss_pred cccCcCceeHHHHHHhhhccC
Q 026091 223 MLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|++++||+
T Consensus 209 -----R~g~pedvA~~v~fL~ 224 (252)
T d1zmta1 209 -----RLGTQKELGELVAFLA 224 (252)
T ss_dssp -----SCBCHHHHHHHHHHHH
T ss_pred -----CCcCHHHHHHHHHHHh
Confidence 6889999999998863
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.88 E-value=2.5e-22 Score=161.34 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=140.6
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh-----hchhhhhhcCCCCCCCeEEEecCCCChhhHHHH
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ-----KRDLSFLTNLPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
|+.+.|+++||||+++||++++++|+++|++|++.+|+.... ...+..+... .......+.+|+.|.++++++
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~ 80 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE--IRRRGGKAVANYDSVEAGEKL 80 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHH--HHHTTCEEEEECCCGGGHHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHH--HhhcccccccccchHHHHHHH
Confidence 677889999999999999999999999999999988732210 1111111100 011335567788888777666
Q ss_pred hc-------cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEEecceeeecCCCC
Q 026091 76 IA-------GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLK----SGTVKRVVYTSSASTVHFSGKD 139 (243)
Q Consensus 76 ~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~Ss~~~~~~~~~~ 139 (243)
++ ++|++|||||.... .+.+.+...+++|+.++.++.+++.+ .+ -.+||++||.++..+.+
T Consensus 81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~-- 157 (302)
T d1gz6a_ 81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF-- 157 (302)
T ss_dssp HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCC--
Confidence 54 58999999997554 34567888999999999998887554 34 56999999987654432
Q ss_pred cccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhc
Q 026091 140 VDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMG 216 (243)
Q Consensus 140 ~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~ 216 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+..... +.
T Consensus 158 --------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~----------- 205 (302)
T d1gz6a_ 158 --------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PE----------- 205 (302)
T ss_dssp --------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CH-----------
T ss_pred --------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cH-----------
Confidence 2246999999999999999877 489999999997744321111 00
Q ss_pred CccccccccCcCceeHHHHHHhhhccC
Q 026091 217 NREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 217 ~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+. .++..+|+|.++++|+
T Consensus 206 ---~~~-----~~~~PedvA~~v~fL~ 224 (302)
T d1gz6a_ 206 ---DLV-----EALKPEYVAPLVLWLC 224 (302)
T ss_dssp ---HHH-----HHSCGGGTHHHHHHHT
T ss_pred ---hhH-----hcCCHHHHHHHHHHHc
Confidence 111 3456788888888764
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.2e-21 Score=152.05 Aligned_cols=203 Identities=16% Similarity=0.144 Sum_probs=142.8
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
.++|+++||||++.||++++++|+++|++|++++|+........+.+ ......+..|+.+.+.+++..+
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCCcccccccccccccccccccccccc
Confidence 47899999999999999999999999999999999554333222222 3477889999998877666654
Q ss_pred --cccEEEEeeeccCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEEecceeeec
Q 026091 78 --GCTGVIHVAAPIDI-----------HGKEPEEVIIQRAVSGTIGILKSCLKS---------GTVKRVVYTSSASTVHF 135 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~i~~Ss~~~~~~ 135 (243)
..|.++++++.... .+.+.+...+++|+.++.++.+++.+. ..-.+||++||.+...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 36888887754322 223467788999999999999887553 01348999999875433
Q ss_pred CCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHH
Q 026091 136 SGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLA 212 (243)
Q Consensus 136 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~ 212 (243)
.+ ....|+.+|.+.+.+.+.++.+. ||+++.+.||.+..+......... ..
T Consensus 157 ~~----------------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~----~~ 210 (248)
T d2o23a1 157 QV----------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV----CN 210 (248)
T ss_dssp CT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------C
T ss_pred CC----------------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH----HH
Confidence 21 23569999999999999998774 899999999999887543322111 11
Q ss_pred HHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 213 MVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 213 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.....-+... .+...+|+|+++++|
T Consensus 211 ~~~~~~pl~~-----R~g~peevA~~v~fL 235 (248)
T d2o23a1 211 FLASQVPFPS-----RLGDPAEYAHLVQAI 235 (248)
T ss_dssp HHHHTCSSSC-----SCBCHHHHHHHHHHH
T ss_pred HHHhcCCCCC-----CCcCHHHHHHHHHHH
Confidence 1111111112 578999999999876
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.87 E-value=5.5e-21 Score=149.70 Aligned_cols=175 Identities=21% Similarity=0.225 Sum_probs=130.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHH---cCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLD---HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
||+||||||+++||++++++|++ .|++|++.+| +.+..+.+..+.. ...++.++.+|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 77 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAK---NHSNIHILEIDLRNFDAYDKLVADIEG 77 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHH---HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHHHh---cCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence 78999999999999999999974 6899999999 5544333333222 24589999999999988887754
Q ss_pred -----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc---------------CCccEEEEEecce
Q 026091 78 -----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS---------------GTVKRVVYTSSAS 131 (243)
Q Consensus 78 -----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------------~~~~~~i~~Ss~~ 131 (243)
++|++||+||.... ...+.+...+++|+.++..+.+.+... + ..++|++||..
T Consensus 78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~ 156 (248)
T d1snya_ 78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSIL 156 (248)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGG
T ss_pred HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-ccccccccccc
Confidence 37999999986433 223446678999999999887765432 2 35899999965
Q ss_pred eeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCC
Q 026091 132 TVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQL 203 (243)
Q Consensus 132 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~ 203 (243)
....... .+....|+.||.+...+.+.++.+ +|++++.+.||.+-.+......
T Consensus 157 g~~~~~~-------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~ 212 (248)
T d1snya_ 157 GSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA 212 (248)
T ss_dssp GCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred cccCCCC-------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence 3211110 012236999999999999998866 4899999999999998755543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.87 E-value=9.3e-22 Score=155.16 Aligned_cols=170 Identities=22% Similarity=0.216 Sum_probs=129.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG----- 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----- 78 (243)
.+++|||||+|.||.+++++|+++|+ .|++++|+..........+.++...+.++.++.+|++|.+++.++++.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 46899999999999999999999998 577788843222211111222222356799999999999999998763
Q ss_pred -ccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchh
Q 026091 79 -CTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVD 152 (243)
Q Consensus 79 -~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~ 152 (243)
+|.|+|+++.... ...+.+...++.|+.++.++.+.++..+ ..+||++||.+...+.+
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~--------------- 152 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP--------------- 152 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT---------------
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCc---------------
Confidence 6899999987554 2334566788899999999999888777 78999999987654442
Q ss_pred hhhhcCCCCchHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCC
Q 026091 153 YIRKLDIWGKSYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPF 198 (243)
Q Consensus 153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~ 198 (243)
....|+.+|...+.+.+++. ..|++++.+.||.+.+++
T Consensus 153 -------~~~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 153 -------GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSG 190 (259)
T ss_dssp -------TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---
T ss_pred -------ccHHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCc
Confidence 22359999999999988875 459999999999988764
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=8e-21 Score=150.97 Aligned_cols=193 Identities=19% Similarity=0.096 Sum_probs=131.0
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-------c
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-------G 78 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~ 78 (243)
.++||||+++||++++++|+++ |++|++.+|+.....+..+.+.. .+.+++++++|++|.++++++++ +
T Consensus 5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA---EGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4599999999999999999986 89999999943333333333332 24578999999999999888765 4
Q ss_pred ccEEEEeeeccCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccc---------c
Q 026091 79 CTGVIHVAAPIDIH-----GKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDM---------L 143 (243)
Q Consensus 79 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~---------~ 143 (243)
+|++|||||..... ..+.+...+++|+.++..+.+.+.+.- +-.++|++||.+.....+..... .
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~ 161 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 161 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence 79999999975441 123455688999999999999887652 13589999997654332111000 0
Q ss_pred cCCCCC----------chhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-------cCccEEEEccCceeCCCCCCC
Q 026091 144 DETFWS----------DVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-------HGLDLVTIIPSFVTGPFICPQ 202 (243)
Q Consensus 144 ~e~~~~----------~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~gi~~~~~rp~~i~G~~~~~~ 202 (243)
.+.... ..........+...|+.||.....+.+.++.+ .|++++.+.||+|-.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~ 237 (275)
T d1wmaa1 162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 237 (275)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence 000000 00000111224457999999988887766544 289999999999988765443
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.85 E-value=5.4e-21 Score=156.99 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=128.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh-hHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE-SFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~v 82 (243)
+.|+|+|||||||||++++++|+++||+|++++| ++.... ...+.. ..+++.+++|+.|.. .+..+++++|.+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~-~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~~~~~~ 75 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLI-AEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLA 75 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CSCSHH-HHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEEC-Ccchhh-hhhhcc----cCCCEEEEeeCCCcHHHHHHHhcCCceE
Confidence 4689999999999999999999999999999999 443221 112222 247999999998864 577788899988
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGK 162 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 162 (243)
++..... ...++..+.+++++|++.| ++++++.||......... .+..
T Consensus 76 ~~~~~~~-----------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~--------------------~~~~ 123 (350)
T d1xgka_ 76 FINTTSQ-----------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGP--------------------WPAV 123 (350)
T ss_dssp EECCCST-----------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSS--------------------CCCC
T ss_pred Eeecccc-----------cchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCc--------------------ccch
Confidence 7664321 1124556789999999999 888888888643222110 1223
Q ss_pred hHHhhHHHHHHHHHHHHHHcCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc----cccccccCcCceeH-HHHHH
Q 026091 163 SYKLSKTLAERAALEFAEEHGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR----EEYSMLLNISMVHI-DDVAR 237 (243)
Q Consensus 163 ~y~~sK~~~e~~~~~~~~~~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v-~Dva~ 237 (243)
+|..+|...+.++++ .+++++++||+.+++............ ....... ....++..+.++++ +|+++
T Consensus 124 ~~~~~k~~~~~~~~~----~~~~~~~vr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~ 196 (350)
T d1xgka_ 124 PMWAPKFTVENYVRQ----LGLPSTFVYAGIYNNNFTSLPYPLFQM---ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGP 196 (350)
T ss_dssp TTTHHHHHHHHHHHT----SSSCEEEEEECEEGGGCBSSSCSSCBE---EECTTSCEEEEESSCTTSCEEEECHHHHHHH
T ss_pred hhhhhHHHHHHHHHh----hccCceeeeeceeeccccccccccccc---cccccccceeeecccCCCcceEEEeHHHHHH
Confidence 478888877776554 689999999999988643322211100 0000011 11223556677775 78888
Q ss_pred hhhc
Q 026091 238 AHIF 241 (243)
Q Consensus 238 a~~~ 241 (243)
++..
T Consensus 197 ~v~~ 200 (350)
T d1xgka_ 197 ALLQ 200 (350)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=7.1e-20 Score=144.13 Aligned_cols=207 Identities=15% Similarity=0.093 Sum_probs=144.6
Q ss_pred CCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 3 EEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
+++|+||||||+| .||++++++|+++|++|++..|+ +........+.. .......+..|+.+..+..+.++
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAA---QLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS-TTTHHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHHh---hcCCcceeecccchHHHHHHHHHHhh
Confidence 3689999999999 89999999999999999999994 433333333222 23466788889998877777664
Q ss_pred ----cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCccc
Q 026091 78 ----GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDM 142 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~ 142 (243)
..|.+||+++.... ...+.+...++.|+.+...+.+.+.... +-+.++++||.+...+.+
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~----- 153 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 153 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC-----
Confidence 36999999976432 1223345567778888888888777652 135688888865332221
Q ss_pred ccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHHc---CccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcc
Q 026091 143 LDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEEH---GLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNRE 219 (243)
Q Consensus 143 ~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (243)
....|+.+|.+.+.+.+.++.+. ||+++.++||.|..+....... .........+ ..
T Consensus 154 -----------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~-~~ 213 (258)
T d1qsga_ 154 -----------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKMLAHCEA-VT 213 (258)
T ss_dssp -----------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--HHHHHHHHHH-HS
T ss_pred -----------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccch--hhhHHHHHHh-CC
Confidence 22469999999999999998884 7999999999999886443311 1111111111 12
Q ss_pred ccccccCcCceeHHHHHHhhhccC
Q 026091 220 EYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 220 ~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
++. .+..++|+|+++.+|+
T Consensus 214 pl~-----R~~~peeia~~v~fL~ 232 (258)
T d1qsga_ 214 PIR-----RTVTIEDVGNSAAFLC 232 (258)
T ss_dssp TTS-----SCCCHHHHHHHHHHHT
T ss_pred CCC-----CCcCHHHHHHHHHHHh
Confidence 233 6889999999998874
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.84 E-value=6e-20 Score=143.89 Aligned_cols=174 Identities=18% Similarity=0.208 Sum_probs=122.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
+|+||||||++.||++++++|+++|+ .|++.+| +.+..+.+ ... .+.+++++++|++|.++++++++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R-~~~~~~~l---~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKATEL---KSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGGCHHH---HTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC-CHHHHHHH---HHh--hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999995 6887888 55433332 221 24579999999999988877764
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----C----------CccEEEEEecceee
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRAVSGTIGILKSCLKS----G----------TVKRVVYTSSASTV 133 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~----------~~~~~i~~Ss~~~~ 133 (243)
++|++|||||.... .+.+.+...+++|+.++.++.+.+.+. + ...+++.+|+....
T Consensus 77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 27999999996432 223456789999999999988765432 1 02367777765432
Q ss_pred ecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCC
Q 026091 134 HFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFI 199 (243)
Q Consensus 134 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~ 199 (243)
....... .. ..+...|+.||.+...+.+.++.+ +||+++.+.||.|-.+..
T Consensus 157 ~~~~~~~-----~~----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~ 210 (250)
T d1yo6a1 157 ITDNTSG-----SA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210 (250)
T ss_dssp STTCCST-----TS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred ccCCccc-----cc----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence 2221110 00 112346999999999999999876 489999999999987753
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.84 E-value=1.6e-20 Score=145.90 Aligned_cols=186 Identities=14% Similarity=0.136 Sum_probs=130.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh-------
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI------- 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------- 76 (243)
+.|+||||||+|.||++++++|+++|++|.+++|+..... .....+..|..+.+....+.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLL 67 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cccceeecccCcHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999988443111 13345556665554443332
Q ss_pred c--cccEEEEeeeccCC---CC---CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCC
Q 026091 77 A--GCTGVIHVAAPIDI---HG---KEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 77 ~--~~d~vi~~a~~~~~---~~---~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
. ++|++||+||.... .. .+.+...+++|+.++.++.+++.+.- +-.+||++||.+...+.+
T Consensus 68 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~---------- 137 (236)
T d1dhra_ 68 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP---------- 137 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc----------
Confidence 2 37999999985332 11 23455678999999999988877642 135899999976543221
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccccc
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYS 222 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (243)
....|+.||.+.+.+.+.++.+ +|++++.+.||.+..+... +. ... ..+.
T Consensus 138 ------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----------~~-~~~-~~~~ 192 (236)
T d1dhra_ 138 ------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------KS-MPE-ADFS 192 (236)
T ss_dssp ------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------HH-STT-SCGG
T ss_pred ------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----------hh-Ccc-chhh
Confidence 1246999999999999999865 4799999999999886311 11 111 1122
Q ss_pred cccCcCceeHHHHHHhhhcc
Q 026091 223 MLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 223 ~~~~~~~i~v~Dva~a~~~~ 242 (243)
.+...+|+|+.+.++
T Consensus 193 -----~~~~pe~va~~~~~l 207 (236)
T d1dhra_ 193 -----SWTPLEFLVETFHDW 207 (236)
T ss_dssp -----GSEEHHHHHHHHHHH
T ss_pred -----cCCCHHHHHHHHHHH
Confidence 567788888887764
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1e-19 Score=144.02 Aligned_cols=168 Identities=14% Similarity=0.076 Sum_probs=126.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhc-----
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIA----- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 77 (243)
++|+++||||+++||++++++|+++|++|++++| +.+..+.... +.. ..+.....+.+|+.+.+....+.+
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r-~~~~l~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCLE--LGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHhh--hhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999 5543333221 111 124467889999999877766654
Q ss_pred --cccEEEEeeeccCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEEecceeeecCCCCcccccCCC
Q 026091 78 --GCTGVIHVAAPIDI-----HGKEPEEVIIQRAVSGTIGILKSCLKS---GTVKRVVYTSSASTVHFSGKDVDMLDETF 147 (243)
Q Consensus 78 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~ 147 (243)
.+|+++|+|+.... .+.+.+...+++|+.++..+.+.+.+. + -.++|++||.++..+.+
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p---------- 158 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYP---------- 158 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCT----------
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCC----------
Confidence 47999999986543 233456678999999988887766542 2 25899999977543331
Q ss_pred CCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCC
Q 026091 148 WSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 148 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~ 197 (243)
....|+.||.+.+.+.+.++.+ .+|+++.+.||.|-.+
T Consensus 159 ------------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~ 201 (269)
T d1xu9a_ 159 ------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 201 (269)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence 2346999999999999998866 3699999999999875
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=1.4e-19 Score=140.81 Aligned_cols=191 Identities=21% Similarity=0.202 Sum_probs=135.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc------cc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA------GC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~ 79 (243)
|++|||||++.||++++++|+++|++|++++|+.. ..+...+++|+.+......+.. ..
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~---------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 66 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL 66 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC---------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc---------------cccceEeeccccchhhhHHHHHhhhccccc
Confidence 79999999999999999999999999999999432 1256778899998877766654 23
Q ss_pred cEEEEeeeccCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEEecceeeecCCCCcc
Q 026091 80 TGVIHVAAPIDI---------HGKEPEEVIIQRAVSGTIGILKSCLKS---------GTVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 80 d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
+.++++++.... ...+.+...++.|+.+...+.+.+... ..-.+||++||.....+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---- 142 (241)
T d1uaya_ 67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---- 142 (241)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT----
T ss_pred cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC----
Confidence 455555543211 222445678899999888887765432 1135899999987543331
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCc
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNR 218 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~ 218 (243)
....|+.+|.+.+.+.+.++.+ +||+++.+.||.+..+...... .........+.
T Consensus 143 ------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~----~~~~~~~~~~~ 200 (241)
T d1uaya_ 143 ------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKASLAAQV 200 (241)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHHHHTTC
T ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh----hhHHHHHHhcC
Confidence 2356999999999999999877 4899999999999887433221 11111222222
Q ss_pred cccccccCcCceeHHHHHHhhhcc
Q 026091 219 EEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 219 ~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
+... .+...+|+|+++++|
T Consensus 201 ~~~~-----R~g~pedvA~~v~fL 219 (241)
T d1uaya_ 201 PFPP-----RLGRPEEYAALVLHI 219 (241)
T ss_dssp CSSC-----SCCCHHHHHHHHHHH
T ss_pred CCCC-----CCcCHHHHHHHHHHH
Confidence 2222 578899999999886
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.82 E-value=9.5e-20 Score=141.43 Aligned_cols=158 Identities=20% Similarity=0.232 Sum_probs=115.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI-------- 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------- 76 (243)
.+|||||||+|.||++++++|++.|++|++++|+..+.. .....+.+|..+.+......
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQ 68 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHHHHHHHHHhc
Confidence 358999999999999999999999999999999433111 13345566776554433322
Q ss_pred -ccccEEEEeeeccCC---CC---CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEEecceeeecCCCCcccccCCCC
Q 026091 77 -AGCTGVIHVAAPIDI---HG---KEPEEVIIQRAVSGTIGILKSCLKSG-TVKRVVYTSSASTVHFSGKDVDMLDETFW 148 (243)
Q Consensus 77 -~~~d~vi~~a~~~~~---~~---~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~ 148 (243)
.++|++|||||.... .. .+.+...+++|+.++..+.+++.+.- .-.+||++||.+...+.+
T Consensus 69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~----------- 137 (235)
T d1ooea_ 69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP----------- 137 (235)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-----------
Confidence 247999999986332 11 23455678899999999888877752 135899999976543331
Q ss_pred CchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH-----cCccEEEEccCceeCC
Q 026091 149 SDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE-----HGLDLVTIIPSFVTGP 197 (243)
Q Consensus 149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~gi~~~~~rp~~i~G~ 197 (243)
...+|+.+|.+.+.+.+.++.+ .+++++.+.||.+..+
T Consensus 138 -----------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~ 180 (235)
T d1ooea_ 138 -----------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 180 (235)
T ss_dssp -----------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred -----------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence 2246999999999999999866 3789999999998765
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.80 E-value=9.5e-19 Score=138.76 Aligned_cols=206 Identities=12% Similarity=0.066 Sum_probs=132.0
Q ss_pred CCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc---
Q 026091 3 EEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--- 77 (243)
Q Consensus 3 ~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--- 77 (243)
++.|++|||||+| .||.+++++|+++|++|++++|+ ++..+....+.. ......++..|+++.+++.++++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~-~~~~~~~~~l~~---~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQ---ELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS-TTTHHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHh---hCCceeEeeecccchhhHHHHHHHHH
Confidence 3589999999887 79999999999999999999994 433333333332 23466788999999988777764
Q ss_pred ----cccEEEEeeeccCC------CCCChHHHHHHHH---HHHHHHHHHHHHhcCCccE-EEEEecceeeecCCCCcccc
Q 026091 78 ----GCTGVIHVAAPIDI------HGKEPEEVIIQRA---VSGTIGILKSCLKSGTVKR-VVYTSSASTVHFSGKDVDML 143 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~n---~~~~~~l~~~~~~~~~~~~-~i~~Ss~~~~~~~~~~~~~~ 143 (243)
.+|++||+++.... ...+.+......+ ............+..+... ++..|+.+.....
T Consensus 79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~------- 151 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------- 151 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-------
Confidence 47999999986433 1122222233322 2233344444433321334 4444443322111
Q ss_pred cCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCccc
Q 026091 144 DETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREE 220 (243)
Q Consensus 144 ~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 220 (243)
+....|+.+|.+.+.+.+.++.+ +|++++.+.||.+..+........ +........ ..+
T Consensus 152 ---------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~-~~p 213 (274)
T d2pd4a1 152 ---------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF--RMILKWNEI-NAP 213 (274)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH--HHHHHHHHH-HST
T ss_pred ---------------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch--HHHHHHHhh-hhh
Confidence 12356999999999999998877 489999999999998754333211 111111111 112
Q ss_pred cccccCcCceeHHHHHHhhhcc
Q 026091 221 YSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 221 ~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
.. .+...+|+|+++.+|
T Consensus 214 ~~-----r~~~pedIA~~v~fL 230 (274)
T d2pd4a1 214 LR-----KNVSLEEVGNAGMYL 230 (274)
T ss_dssp TS-----SCCCHHHHHHHHHHH
T ss_pred cc-----CCcCHHHHHHHHHHH
Confidence 22 788999999999886
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.80 E-value=1.2e-18 Score=138.87 Aligned_cols=205 Identities=15% Similarity=0.060 Sum_probs=132.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh-hcC---------------CCCCCCeEEEecCCCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL-TNL---------------PRASERLQIFNADLNN 68 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~~D~~d 68 (243)
++.++||||++.||++++++|++.|++|++..|++.+..+.+... ... .........+.+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 578999999999999999999999999999888555433222211 110 0011233445667888
Q ss_pred hhhHHHHhc-------cccEEEEeeeccCCC-----CCCh--------------HHHHHHHHHHHHHHHHHHHHhc----
Q 026091 69 PESFDAAIA-------GCTGVIHVAAPIDIH-----GKEP--------------EEVIIQRAVSGTIGILKSCLKS---- 118 (243)
Q Consensus 69 ~~~~~~~~~-------~~d~vi~~a~~~~~~-----~~~~--------------~~~~~~~n~~~~~~l~~~~~~~---- 118 (243)
.++++++++ ++|++||+||..... ..+. +...+.+|+.++..+.+++.+.
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 888888765 589999999975431 1111 1235778888888887765431
Q ss_pred -----CCccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEc
Q 026091 119 -----GTVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTII 190 (243)
Q Consensus 119 -----~~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~r 190 (243)
+...+++.++|.....+. +....|+.+|.+.+.+.+.++.+ +||+++.+.
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~----------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~ 219 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG 219 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHhcCCCCcccccccccccCCc----------------------cceeeeccccccchhhhHHHHHHhCCccccccccc
Confidence 213467777775432211 12246999999999999999877 489999999
Q ss_pred cCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 191 PSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 191 p~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
||.+-.... . .....+......+... .+...+|+|+++++|
T Consensus 220 PG~t~~~~~--~----~~~~~~~~~~~~pl~~-----R~~~peeiA~~v~fL 260 (284)
T d1e7wa_ 220 PGLSVLVDD--M----PPAVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFL 260 (284)
T ss_dssp ESSBCCGGG--S----CHHHHHHHHTTCTTTT-----SCBCHHHHHHHHHHH
T ss_pred ccccccccc--C----CHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHH
Confidence 997433211 1 1222223222222223 678999999999886
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.78 E-value=1.1e-18 Score=137.98 Aligned_cols=207 Identities=12% Similarity=0.024 Sum_probs=132.2
Q ss_pred CCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc----
Q 026091 4 EKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA---- 77 (243)
Q Consensus 4 ~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 77 (243)
++|+++||||+| +||.+++++|++.|++|++..|++.+..+... + ..+.+...+++|+++++++.++++
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~---~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---D--RLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---T--TSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH---H--HcCCceeeEeeecccccccccccchhhh
Confidence 579999999654 69999999999999999999995543222222 1 124567889999999876665543
Q ss_pred ------cccEEEEeeeccCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecceeeecCCCCcc
Q 026091 78 ------GCTGVIHVAAPIDI----------HGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSASTVHFSGKDVD 141 (243)
Q Consensus 78 ------~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~ 141 (243)
.+|+++|+++.... .+.+.+...+..|..........+.........+..+|.......
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~----- 154 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM----- 154 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-----
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC-----
Confidence 36999999985432 111233345666676777666666655322344444443322111
Q ss_pred cccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCC----CCCc----HHHH
Q 026091 142 MLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQ----LAGS----VRGT 210 (243)
Q Consensus 142 ~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~----~~~~----~~~~ 210 (243)
|....|+.+|.+.+.+.+.++.+ +||+++.|.||.+..+..... .... ...+
T Consensus 155 -----------------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 217 (268)
T d2h7ma1 155 -----------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL 217 (268)
T ss_dssp -----------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHH
T ss_pred -----------------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHH
Confidence 12246999999999999999877 489999999999987632111 0000 0111
Q ss_pred HHHHhcCccccccccCcCceeHHHHHHhhhcc
Q 026091 211 LAMVMGNREEYSMLLNISMVHIDDVARAHIFF 242 (243)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 242 (243)
........+. .+.+..++|+|+++.+|
T Consensus 218 ~~~~~~~~pl-----~rr~~~p~dva~~v~fL 244 (268)
T d2h7ma1 218 EEGWDQRAPI-----GWNMKDATPVAKTVCAL 244 (268)
T ss_dssp HHHHHHHCTT-----CCCTTCCHHHHHHHHHH
T ss_pred HHHHHhcCCC-----CCCCCCHHHHHHHHHHH
Confidence 1111111111 22578899999998876
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.77 E-value=1.9e-17 Score=132.58 Aligned_cols=213 Identities=12% Similarity=0.067 Sum_probs=132.2
Q ss_pred CCCCCCeEEEecCch--hhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc-------C-C-CCCCC---eEEEecCC
Q 026091 1 MEEEKGRVCVTGGTG--FIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN-------L-P-RASER---LQIFNADL 66 (243)
Q Consensus 1 m~~~~k~ilvtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~-~-~~~~~---~~~~~~D~ 66 (243)
|.++.|++|||||+| .||++++++|++.|++|++..| .+........+.. . . ..... +..+..++
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW-VPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE-HHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-chhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 455789999999987 8999999999999999999988 4321111111100 0 0 00111 12222222
Q ss_pred ------------------CChhhHHHHh-------ccccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHH
Q 026091 67 ------------------NNPESFDAAI-------AGCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKS 114 (243)
Q Consensus 67 ------------------~d~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~ 114 (243)
.+...+++++ .++|++||+||.... .+.+.+...+++|+.+...+.++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 2222223332 358999999986321 23456778999999999999998
Q ss_pred HHhcCC-ccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHH----HcCccEEEE
Q 026091 115 CLKSGT-VKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAE----EHGLDLVTI 189 (243)
Q Consensus 115 ~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~gi~~~~~ 189 (243)
+..... -++++.+++.+...... +....|..+|...+.+.+.++. ++||+++.+
T Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~---------------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I 221 (297)
T d1d7oa_ 163 FLPIMNPGGASISLTYIASERIIP---------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTI 221 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSCCT---------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHhhcCCcceeeeehhhccccc---------------------ccccceecccccccccccccchhccccceEEeccc
Confidence 876531 23456666544221111 1224599999988887776544 458999999
Q ss_pred ccCceeCCCCCCCCCCcHHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 190 IPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 190 rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
.||.+..+..... .....+.+.... ..++. .+...+|+|+++++|+
T Consensus 222 ~PG~i~T~~~~~~--~~~~~~~~~~~~-~~Plg-----R~~~peevA~~v~fL~ 267 (297)
T d1d7oa_ 222 SAGPLGSRAAKAI--GFIDTMIEYSYN-NAPIQ-----KTLTADEVGNAAAFLV 267 (297)
T ss_dssp EECCCBCCCSSCC--SHHHHHHHHHHH-HSSSC-----CCBCHHHHHHHHHHHT
T ss_pred ccccccchhhhhc--cCCHHHHHHHHh-CCCCC-----CCCCHHHHHHHHHHHh
Confidence 9999998864432 112222222221 12233 6889999999999874
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.75 E-value=7.8e-17 Score=126.91 Aligned_cols=203 Identities=16% Similarity=0.143 Sum_probs=126.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch-hhhhhcCCCCCCCeEEEecCCCCh----hhHHHHhc---
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD-LSFLTNLPRASERLQIFNADLNNP----ESFDAAIA--- 77 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~--- 77 (243)
+++|||||++.||++++++|+++|++|++++|+.+...+. ...+... .......+..|..+. +.+.++++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 79 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh--cCCceEEEecccccchhHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999954433222 1222211 234666777666543 33434332
Q ss_pred ----cccEEEEeeeccCCCC----------------CChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEEec
Q 026091 78 ----GCTGVIHVAAPIDIHG----------------KEPEEVIIQRAVSGTIGILKSCLKSG--------TVKRVVYTSS 129 (243)
Q Consensus 78 ----~~d~vi~~a~~~~~~~----------------~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~i~~Ss 129 (243)
++|++||+||...... ...+...+..|+.............. ....++.+|+
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (266)
T d1mxha_ 80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 159 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence 5899999999754311 01122344556555555555444321 0224555555
Q ss_pred ceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCc
Q 026091 130 ASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGS 206 (243)
Q Consensus 130 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~ 206 (243)
....... +....|+.||.+.+.+.+.++.+ +||+++.+.||.+..+....
T Consensus 160 ~~~~~~~----------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----- 212 (266)
T d1mxha_ 160 AMTDLPL----------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----- 212 (266)
T ss_dssp GGGGSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----
T ss_pred ccccccC----------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----
Confidence 4322111 12346999999999999999876 58999999999988763221
Q ss_pred HHHHHHHHhcCccccccccCcCceeHHHHHHhhhccC
Q 026091 207 VRGTLAMVMGNREEYSMLLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 243 (243)
....+..... .++. +.+...+|+|+++++|+
T Consensus 213 -~~~~~~~~~~-~pl~----r~~~~peeva~~v~fL~ 243 (266)
T d1mxha_ 213 -QETQEEYRRK-VPLG----QSEASAAQIADAIAFLV 243 (266)
T ss_dssp -HHHHHHHHTT-CTTT----SCCBCHHHHHHHHHHHH
T ss_pred -HHHHHHHHhc-CCCC----CCCCCHHHHHHHHHHHh
Confidence 1122222222 1121 24578999999998863
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.73 E-value=4.4e-17 Score=132.27 Aligned_cols=170 Identities=9% Similarity=0.038 Sum_probs=114.4
Q ss_pred CCeEEEec--CchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhh----------cCCCCCCCeEEEe---------
Q 026091 5 KGRVCVTG--GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT----------NLPRASERLQIFN--------- 63 (243)
Q Consensus 5 ~k~ilvtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~--------- 63 (243)
.|.+|||| ++..||++++++|++.|++|++..|.... ......+. .............
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY-NIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh-hhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 58999999 55799999999999999999988873321 11111000 0000001112222
Q ss_pred -----------cCCCChhhHHHHhc-------cccEEEEeeeccCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc
Q 026091 64 -----------ADLNNPESFDAAIA-------GCTGVIHVAAPIDI-------HGKEPEEVIIQRAVSGTIGILKSCLKS 118 (243)
Q Consensus 64 -----------~D~~d~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (243)
.|+.+.++++++++ ++|++||+||.... .+.++|...+++|+.++..+.+++.+.
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 24555555555543 68999999985432 234567789999999999999988776
Q ss_pred C-CccEEEEEecceeeecCCCCcccccCCCCCchhhhhhcCCCCchHHhhHHHHHHHHHHHHHH----cCccEEEEccCc
Q 026091 119 G-TVKRVVYTSSASTVHFSGKDVDMLDETFWSDVDYIRKLDIWGKSYKLSKTLAERAALEFAEE----HGLDLVTIIPSF 193 (243)
Q Consensus 119 ~-~~~~~i~~Ss~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~gi~~~~~rp~~ 193 (243)
- .-.++|.+||.+.....+ .+...|+.+|.+.+.+.+.++.+ +||+++.|.||.
T Consensus 161 m~~~GsIv~iss~~~~~~~p---------------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~ 219 (329)
T d1uh5a_ 161 MKPQSSIISLTYHASQKVVP---------------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP 219 (329)
T ss_dssp EEEEEEEEEEECGGGTSCCT---------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred cccccccccceeehhccccc---------------------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCc
Confidence 2 135899998865432221 01245999999999999988754 589999999999
Q ss_pred eeC
Q 026091 194 VTG 196 (243)
Q Consensus 194 i~G 196 (243)
|-.
T Consensus 220 i~T 222 (329)
T d1uh5a_ 220 LKS 222 (329)
T ss_dssp CCC
T ss_pred ccc
Confidence 866
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.70 E-value=1.6e-16 Score=124.50 Aligned_cols=209 Identities=18% Similarity=0.114 Sum_probs=118.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI-------- 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------- 76 (243)
||+||||||++.||++++++|++.|++|++++|++.+ ...|+.+........
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~ 60 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999994331 134666654444332
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEEecceeeecCCCCccccc---CCCCC
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCL----KSGTVKRVVYTSSASTVHFSGKDVDMLD---ETFWS 149 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~---e~~~~ 149 (243)
+.+|+++|+|+..... +.+......|..+...+.+... +.. ......+++............... .....
T Consensus 61 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 61 KGMDGLVLCAGLGPQT--KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp TCCSEEEECCCCCTTC--SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred CCCcEEEEcCCCCCcH--HHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 2479999999864432 4455677778877776655433 333 345555555322111100000000 00000
Q ss_pred chhh-hhh--cCCCCchHHhhHHHHHHHHHHHHHH---cCccEEEEccCceeCCCCCCCCCCcHHHHHHHHhcCcccccc
Q 026091 150 DVDY-IRK--LDIWGKSYKLSKTLAERAALEFAEE---HGLDLVTIIPSFVTGPFICPQLAGSVRGTLAMVMGNREEYSM 223 (243)
Q Consensus 150 ~~~~-~~~--~~~~~~~y~~sK~~~e~~~~~~~~~---~gi~~~~~rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (243)
.... ... ..+...+|+.+|.+.+.+.+.++.+ +||+++.+.||.+-.+........ ....+.......+..
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~Plg- 214 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAKFVPPMG- 214 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTT-
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--HHHHHHHHhcCCCCC-
Confidence 0000 000 0011235999999999999999866 489999999999988754322111 011111111212233
Q ss_pred ccCcCceeHHHHHHhhhccC
Q 026091 224 LLNISMVHIDDVARAHIFFT 243 (243)
Q Consensus 224 ~~~~~~i~v~Dva~a~~~~~ 243 (243)
.+...+|+|+++.+|+
T Consensus 215 ----R~g~p~eva~~v~fL~ 230 (257)
T d1fjha_ 215 ----RRAEPSEMASVIAFLM 230 (257)
T ss_dssp ----SCCCTHHHHHHHHHHT
T ss_pred ----CCcCHHHHHHHHHHHh
Confidence 6889999999999874
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.40 E-value=1.8e-13 Score=102.16 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=66.7
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+.|+|+||||+|+||+.+++.|++.|++|++++| +.+..... ..+.. ..++....+|+.|.+.++++++++|+
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~iDi 95 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNK----RFKVNVTAAETADDASRAEAVKGAHF 95 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH----HHTCCCEEEECCSHHHHHHHTTTCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhccchhhccc-chHHHHHHHHHHHh----ccchhhhhhhcccHHHHHHHhcCcCe
Confidence 36799999999999999999999999999999999 54433222 22222 12566788999999999999999999
Q ss_pred EEEeeecc
Q 026091 82 VIHVAAPI 89 (243)
Q Consensus 82 vi~~a~~~ 89 (243)
|||+||..
T Consensus 96 lin~Ag~g 103 (191)
T d1luaa1 96 VFTAGAIG 103 (191)
T ss_dssp EEECCCTT
T ss_pred eeecCccc
Confidence 99999863
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.70 E-value=5.5e-08 Score=68.31 Aligned_cols=115 Identities=15% Similarity=0.209 Sum_probs=72.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+||.|+|+ |++|+.++..|+.+| .++.+++++..........+............+.+|.. .++++|+|
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~~~adiv 76 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DCKDADLV 76 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------HhccccEE
Confidence 468999995 999999999999987 68999998332222222222221112233455555542 35789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|.+||.......+ ..+....|..-...+.+...+.+ .+.++.+-|
T Consensus 77 vitag~~~~~g~~-r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvt 121 (146)
T d1ez4a1 77 VITAGAPQKPGES-RLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA 121 (146)
T ss_dssp EECCCC-----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred EEecccccCCCCC-HHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence 9999865543222 34778889999999999999998 555554443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.67 E-value=1.8e-07 Score=65.39 Aligned_cols=114 Identities=16% Similarity=0.198 Sum_probs=77.2
Q ss_pred eEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
||.|+||+|.+|++++-.|..+| -++.+++. .+... ....+.... .......+ ....+..+.++++|+||.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi-~~~~~-~a~Dl~~~~-~~~~~~~~----~~~~~~~~~~~~aDivVi 74 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI-AHTPG-VAADLSHIE-TRATVKGY----LGPEQLPDCLKGCDVVVI 74 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES-SSHHH-HHHHHTTSS-SSCEEEEE----ESGGGHHHHHTTCSEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEec-cccch-hhHHHhhhh-hhcCCCeE----EcCCChHHHhCCCCEEEE
Confidence 79999999999999999998887 46888887 43322 222222110 01111111 234666778899999999
Q ss_pred eeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 85 VAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 85 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+||....... ...+.++.|......+++.+.+++ .+.++.+-|
T Consensus 75 tag~~~~~g~-sR~~ll~~N~~i~~~i~~~i~~~~-p~~iiivvt 117 (144)
T d1mlda1 75 PAGVPRKPGM-TRDDLFNTNATIVATLTAACAQHC-PDAMICIIS 117 (144)
T ss_dssp CCSCCCCTTC-CGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred CCCcCCCCCC-CcchHHHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence 9986544322 344789999999999999999998 555554443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.57 E-value=4.3e-07 Score=63.83 Aligned_cols=118 Identities=18% Similarity=0.255 Sum_probs=77.3
Q ss_pred CCC-CCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchh-hchhhhhhcC-CCCCCCeEEEecCCCChhhHHHH
Q 026091 1 MEE-EKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQ-KRDLSFLTNL-PRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 1 m~~-~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
|++ ..+||.|+|| |++|++++..|+.++ .++.++++ .++. ......+.+. ............|. +.
T Consensus 1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di-~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~ 71 (148)
T d1ldna1 1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DD 71 (148)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GG
T ss_pred CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEee-ccccccchhccHhhCccccCCCeEEEECCH-------HH
Confidence 444 4578999996 999999999999887 47888888 4432 2222223221 11223444445543 34
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
++++|+||.+++.......+ ..+.+..|..-...+.+..+++++-..++.+|
T Consensus 72 l~daDvvvitag~~~~~~~~-R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 72 CRDADLVVICAGANQKPGET-RLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp TTTCSEEEECCSCCCCTTTC-SGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred hccceeEEEecccccccCcc-hhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 66899999999875543323 23778889999999999999988333444443
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.56 E-value=1.5e-07 Score=65.02 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=57.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|+|+|+|+ |.+|+.+++.|.+.|++|+++.+ +++....+.. . .+...+.+|.+|++.+.++ ++++|.++-
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~-d~~~~~~~~~--~-----~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~ 71 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKDICKKASA--E-----IDALVINGDCTKIKTLEDAGIEDADMYIA 71 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--H-----CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecC-Chhhhhhhhh--h-----hhhhhccCcccchhhhhhcChhhhhhhcc
Confidence 48999995 99999999999999999999999 6644433321 1 2568899999999999998 578898885
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 72 ~ 72 (132)
T d1lssa_ 72 V 72 (132)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.53 E-value=1e-06 Score=61.51 Aligned_cols=115 Identities=12% Similarity=0.030 Sum_probs=75.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhh---chhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQK---RDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
+||.|+||+|.+|++++-.|+.++ .++.++++ +++.. .....+.+. .......+....--.|. +.++++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~-~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~a 75 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR-EHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDES 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC-GGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccc-hhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccc
Confidence 379999999999999999999888 48888888 43211 111222221 11122333322211122 355689
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
|+||-+||...... ....+.++.|..-...+++...+++ .+.++.+
T Consensus 76 DvVVitAG~~~~~g-~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV 121 (145)
T d1hyea1 76 DVVIITSGVPRKEG-MSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI 121 (145)
T ss_dssp SEEEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred eEEEEecccccCCC-CChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence 99999998754433 3456899999999999999999988 5555544
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=98.52 E-value=8.6e-07 Score=61.74 Aligned_cols=112 Identities=12% Similarity=0.149 Sum_probs=71.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|+ |.+|+.++-.|+.++ .++.+++++..........+.+..........+.+| . +.++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceEE
Confidence 57999996 999999999999987 489999984432222333333321222334433332 2 2467899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
-+||...... +...+..+.|..-...+++.+.+++ .+.++.+
T Consensus 74 itag~~~~~~-~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~iv 115 (142)
T d1y6ja1 74 VTAGANRKPG-ETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV 115 (142)
T ss_dssp ECCCC-------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE
T ss_pred EecccccCcC-cchhHHhhHHHHHHHHHHHHhhccC-CCceEEE
Confidence 9998655433 3345889999999999999999988 4444433
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=98.48 E-value=1e-06 Score=61.21 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=74.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhh--chhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQK--RDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
||.|+||+|.+|++++-.|..++. ++.++++...... .....+.+......+.+....|.. .++++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCEE
Confidence 799999999999999999999883 6777775221111 122222221112334455555432 24689999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEE
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVY 126 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~ 126 (243)
|-+||...... ....+.++.|..-...+.+..++.+ .+.++.
T Consensus 75 vitaG~~~~~g-~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~i 116 (142)
T d1o6za1 75 VITAGIPRQPG-QTRIDLAGDNAPIMEDIQSSLDEHN-DDYISL 116 (142)
T ss_dssp EECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEE
T ss_pred EEecccccccC-CchhhHHHHHHHHHHHHHHHHHhcC-CCceEE
Confidence 99998654332 4466899999999999999999998 444433
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.46 E-value=4.1e-07 Score=65.76 Aligned_cols=74 Identities=26% Similarity=0.333 Sum_probs=56.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.|+|+|.|| |.+|+++++.|.+.|++|+++.| +......+. . ..........+..+.....+.+...|.++.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr-~~~~a~~l~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 73 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR-TLESAKKLS---A---GVQHSTPISLDVNDDAALDAEVAKHDLVIS 73 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEES-CHHHHHHHH---T---TCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-ChHHHHHHH---h---cccccccccccccchhhhHhhhhccceeEe
Confidence 589999995 99999999999999999999999 554333322 1 123455566777788888888888888875
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 74 ~~ 75 (182)
T d1e5qa1 74 LI 75 (182)
T ss_dssp CS
T ss_pred ec
Confidence 53
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.45 E-value=2e-07 Score=66.00 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=76.3
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhcc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
|..+.+||.|+|+ |.+|+.++..|...+ .++.+++++..........+.... ....... +......++.+++
T Consensus 3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-----~~~~~~~~~~~~~ 76 (154)
T d1pzga1 3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-----VRAEYSYEAALTG 76 (154)
T ss_dssp CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-----EEEECSHHHHHTT
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-----EeccCchhhhhcC
Confidence 4456789999996 999999998888877 488888773332222222221100 0000111 1112334567789
Q ss_pred ccEEEEeeeccCCCCC----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 79 CTGVIHVAAPIDIHGK----EPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 79 ~d~vi~~a~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+|+||-+++......+ ....+....|..-...+++.+.+.+ .+.++.+-|
T Consensus 77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiviivs 130 (154)
T d1pzga1 77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 130 (154)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence 9999999986543211 2334778889999999999999998 555544433
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.44 E-value=8.4e-07 Score=61.97 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=73.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-C--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-G--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|++|.+|++++-.|..+ + .++..+++ .+........+.... .......+. ..+.. +.++++|+|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~-~~~~~g~a~Dl~h~~-~~~~~~~~~----~~~~~-~~~~~aDvv 73 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI-APVTPGVAVDLSHIP-TAVKIKGFS----GEDAT-PALEGADVV 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECS-STTHHHHHHHHHTSC-SSCEEEEEC----SSCCH-HHHTTCSEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecc-cccchhHHHHHHCCc-cccCCcEEE----cCCCc-cccCCCCEE
Confidence 48999999999999999877543 3 68888887 433222222232221 111222221 12223 357789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|.+||....... ...+..+.|..-...+.+...++++-..++.+|.
T Consensus 74 vitaG~~~k~g~-~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 74 LISAGVRRKPGM-DRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp EECCSCCCCTTC-CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EECCCccCCCCc-chhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 999997544332 3447899999999999999999983334554443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.42 E-value=4.7e-07 Score=62.49 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=56.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|+++|+| .|.+|+++++.|.+.|++|+++.. +++....+. ......+.+|.++++.+.++ ++++|.||-
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~-d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~ 70 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDI-NEEKVNAYA--------SYATHAVIANATEENELLSLGIRNFEYVIV 70 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEES-CHHHHHHTT--------TTCSEEEECCTTCTTHHHHHTGGGCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecC-cHHHHHHHH--------HhCCcceeeecccchhhhccCCccccEEEE
Confidence 5788998 599999999999999999999999 664443332 22557888999999999988 678898775
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 71 ~ 71 (134)
T d2hmva1 71 A 71 (134)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=98.38 E-value=3.2e-06 Score=58.79 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=73.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchh-hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQ-KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.||.|+|+ |.+|++++-.|+.+| .++.++++ ++.. ......+...............+ +. +.++++|+|
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~-~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvV 73 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMV 73 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe-ccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEE
Confidence 58999996 999999999999888 47888888 4432 22222222221112223332221 22 235678999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
|-+||...... +...+.+..|..-...+....++++ .+.++.+
T Consensus 74 VitaG~~~~~g-~~R~dl~~~N~~i~~~i~~~i~~~~-p~ai~iv 116 (143)
T d1llda1 74 VITAGPRQKPG-QSRLELVGATVNILKAIMPNLVKVA-PNAIYML 116 (143)
T ss_dssp EECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred EEecccccCCC-CchhhhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Confidence 99999765433 3345889999999999999999998 4444433
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.37 E-value=2.6e-06 Score=59.11 Aligned_cols=113 Identities=19% Similarity=0.178 Sum_probs=73.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+||.|+|| |.+|++++-.|+.++ .++.+++++..........+........+......|. +.++++|+||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence 47899996 999999999888887 5788888833222212221111111123444444332 2357899999
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
-+||........ ..+.+..|..-...+.+...+.+ .+.++.+-
T Consensus 73 itag~~~~~g~~-r~dl~~~N~~I~~~i~~~i~~~~-p~aivivv 115 (140)
T d1a5za1 73 VAAGVPQKPGET-RLQLLGRNARVMKEIARNVSKYA-PDSIVIVV 115 (140)
T ss_dssp ECCCCCCCSSCC-HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EecccccCCCcc-hhhhhccccchHHHHHHHHHhcC-CCcEEEEe
Confidence 999875543333 44788889999999999999998 45454443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.33 E-value=5.6e-07 Score=63.71 Aligned_cols=113 Identities=20% Similarity=0.138 Sum_probs=69.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCC----e-EEEEEeCCchhhchhhhhhc-CC-CCCCCeEEEecCCCChhhHH
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGY----S-VRTTVRSDPEQKRDLSFLTN-LP-RASERLQIFNADLNNPESFD 73 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~----~-V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~~~~D~~d~~~~~ 73 (243)
|+ +++||.|+||+|++|++++-.|++.+. . +..-.-...........+.. .. ........+... ....
T Consensus 1 m~-~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 75 (154)
T d1y7ta1 1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPK 75 (154)
T ss_dssp CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHH
T ss_pred CC-CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchh
Confidence 44 456999999999999999999987642 1 21111112211112221110 00 011223333322 2345
Q ss_pred HHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 74 AAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
+.++++|+||-+||...... ....+.+..|..-...+.+...++.
T Consensus 76 ~~~~~advViitaG~~~~pg-~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 76 VAFKDADYALLVGAAPRKAG-MERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp HHTTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhcccccEEEeecCcCCCCC-CcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 67789999999999765433 3345889999999999999998865
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=98.22 E-value=1e-05 Score=57.09 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=75.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhhchhhhhhcCCC-CCCCeEEEecCCCChhhHHHHhcccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQKRDLSFLTNLPR-ASERLQIFNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d 80 (243)
+.+||.|+|+ |.+|+.++-.|+.+|. ++.+++++..........+..... .........+|.. .++++|
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~-------~~~~ad 90 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS-------VTANSK 90 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG-------GGTTCS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh-------hccccc
Confidence 3469999995 9999999999999984 788888833322223322322111 1222222233332 356789
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccE-EEEEe
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR-VVYTS 128 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~i~~S 128 (243)
+||.+||.......+ ..+..+.|..-...++...++.+ .+. ++.+|
T Consensus 91 iVVitAg~~~~~g~t-R~~l~~~N~~i~~~i~~~i~~~~-p~aiiivvt 137 (160)
T d1i0za1 91 IVVVTAGVRQQEGES-RLNLVQRNVNVFKFIIPQIVKYS-PDCIIIVVS 137 (160)
T ss_dssp EEEECCSCCCCTTCC-GGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred EEEEecCCccccCcc-hHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence 999999975543333 34788899999999999999988 444 44444
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=98.20 E-value=4e-06 Score=58.47 Aligned_cols=113 Identities=17% Similarity=0.144 Sum_probs=71.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchh-hchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQ-KRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
|||.|+| +|++|+.++-.|+.+| .++.++++ .+.. ......+.+. ............|. +.++++|+
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adi 72 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADV 72 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSE
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEec-ccchhhhHHHhhhccccccCCccceeccCH-------HHhccccE
Confidence 7899999 5999999999999887 47888887 4432 2222222221 11223344444443 23478999
Q ss_pred EEEeeeccCCC---CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 82 VIHVAAPIDIH---GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 82 vi~~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
||-+||..... ......+..+.|..-...+.+..++.+ .+.++.+-
T Consensus 73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivv 121 (146)
T d1hyha1 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVI 121 (146)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEe
Confidence 99999864421 112233567789999999999999988 45444443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=2.7e-06 Score=59.35 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=27.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC----CeEEEEEeCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG----YSVRTTVRSD 39 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 39 (243)
||||.|+||||++|+.+++.|+++. .++.++.+++
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 5799999999999999999888763 3566666633
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=98.18 E-value=1.1e-05 Score=55.93 Aligned_cols=113 Identities=14% Similarity=0.108 Sum_probs=72.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|| |.+|++++..|+..+ .++.+++++..........+... .......++... .|. +.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 37999996 999999999999887 58998988443222121122111 001223333322 122 235789999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
|-+||.......+ ..+..+.|..-...+.+...+++ .+.++.+
T Consensus 74 vitag~~~~~g~~-r~~l~~~N~~i~~~i~~~i~~~~-p~aiviv 116 (142)
T d1guza1 74 IITAGLPRKPGMT-REDLLMKNAGIVKEVTDNIMKHS-KNPIIIV 116 (142)
T ss_dssp EECCSCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHHHHHHHhhccC-CCeEEEE
Confidence 9999875443333 45889999999999999999988 4444443
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.13 E-value=1.7e-06 Score=62.70 Aligned_cols=80 Identities=15% Similarity=0.028 Sum_probs=52.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.|||.|+| +|.+|+.++..|.+.|++|.+.+| ++...+.+.............+..........++.+.++++|+||.
T Consensus 1 sk~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii 78 (184)
T d1bg6a2 1 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDI-DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 78 (184)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence 37999999 599999999999999999999999 5544433332211111111222222222223456788899999997
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 79 ~v 80 (184)
T d1bg6a2 79 VV 80 (184)
T ss_dssp CS
T ss_pred EE
Confidence 63
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=98.13 E-value=3.2e-05 Score=55.41 Aligned_cols=117 Identities=11% Similarity=0.043 Sum_probs=70.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-----CeEEEEEeCCchhhchhhh----hhcCCCCCCCeEEEecCCCChhhHHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-----YSVRTTVRSDPEQKRDLSF----LTNLPRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
..||.|+||+|.||++++-.|++.+ ..+.+...+.+.....+.. +.+.. ......+.. .....+.
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a--~~~~~~~~~----~~~~~~~ 97 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL--YPLLREVSI----GIDPYEV 97 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEE----ESCHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc--cccccCccc----cccchhh
Confidence 3479999999999999999998752 2233322212221112121 11111 112222211 1234567
Q ss_pred hccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEEe
Q 026091 76 IAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTV-KRVVYTS 128 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~S 128 (243)
++++|+||-++|...... ....+.++.|..-...+.+.+.++.+. .+++.+|
T Consensus 98 ~~~aDvVvi~ag~~rkpg-~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 98 FEDVDWALLIGAKPRGPG-MERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ccCCceEEEeeccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 789999999998755432 445689999999999999999987522 2444444
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.12 E-value=1.2e-06 Score=64.16 Aligned_cols=36 Identities=36% Similarity=0.505 Sum_probs=32.1
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQ 42 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 42 (243)
|||.|+||+|.+|+++++.|++.||+|.+.+| +++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R-~~e~ 36 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEK 36 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH
Confidence 36889998999999999999999999999999 5543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.05 E-value=3e-05 Score=53.61 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=72.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchh-hchhhhhhcC-CCCCCCeEEEe-cCCCChhhHHHHhcccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQ-KRDLSFLTNL-PRASERLQIFN-ADLNNPESFDAAIAGCT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~-~D~~d~~~~~~~~~~~d 80 (243)
+||.|+|+ |.+|++++-.|+.+| .++.++++ +++. ......+.+. +.......... .|. +.++++|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~ad 71 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSE 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEec-ccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhcccc
Confidence 47899995 999999999998887 47888888 4432 2222222211 11112222222 232 2567889
Q ss_pred EEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 81 GVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+||-+|+...... ....+....|..-...+.+..++.+ ...++.+-|
T Consensus 72 iVvitag~~~~~g-~~r~~l~~~n~~i~~~i~~~i~~~~-p~aivivvt 118 (142)
T d1ojua1 72 IIVVTAGLARKPG-MTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (142)
T ss_dssp EEEECCCCCCCSS-CCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred EEEEeccccCCCC-CchHHHHHHhhHHHHHHHHHHHhhC-CCcEEEEec
Confidence 9999988654433 3455889999999999999999988 444544443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.00 E-value=3.1e-06 Score=59.54 Aligned_cols=40 Identities=23% Similarity=0.434 Sum_probs=35.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP 40 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (243)
|+.+++||.|+||.|.+|+.+++.|.+.||+|.+.+|+..
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~ 44 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 44 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence 4557899999999999999999999999999999999443
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=6.4e-06 Score=59.76 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=59.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+|+|+| +|..|++++.+|.+.|. ++++..| +++..+....+...............|+.+.+.+.+.+..+|.|
T Consensus 17 ~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 17 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEEC-SSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeecc-chHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 468999999 59999999999999985 6888888 54433332222110001123456678899999999999999999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 95 IN~Tp~ 100 (182)
T d1vi2a1 95 TNGTKV 100 (182)
T ss_dssp EECSST
T ss_pred ccccCC
Confidence 999754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.98 E-value=1.8e-05 Score=55.83 Aligned_cols=114 Identities=17% Similarity=0.168 Sum_probs=71.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCCchhhchhhhhhcCC-CCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSDPEQKRDLSFLTNLP-RASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
..||.|+|+ |.+|++++-.|..+| .++.+++++..........+.+.. ...........|. +.++++|+
T Consensus 19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~adi 90 (159)
T d2ldxa1 19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANSKL 90 (159)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccccE
Confidence 357999995 999999999999887 478888883332222222333221 1122222333332 23467899
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccE-EEEEe
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKR-VVYTS 128 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~i~~S 128 (243)
||.+||.......+. .+.++.|..-...+.....+++ .+. ++.+|
T Consensus 91 vvitag~~~~~~~~R-~dll~~N~~i~~~i~~~i~~~~-p~~ivivvt 136 (159)
T d2ldxa1 91 VIITAGARMVSGQTR-LDLLQRNVAIMKAIVPGVIQNS-PDCKIIVVT 136 (159)
T ss_dssp EEECCSCCCCTTTCS-SCTTHHHHHHHHHHTTTHHHHS-TTCEEEECS
T ss_pred EEEecccccCCCCCH-HHHHHHHHHHHHHHHHHHhccC-CCeEEEEeC
Confidence 999998755432222 2567889888888888888887 444 44444
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.96 E-value=2.7e-05 Score=54.68 Aligned_cols=111 Identities=18% Similarity=0.014 Sum_probs=65.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-----CeEEEEEeCCchhhchhhhhhc--CCCCCCCeEEEecCCCChhhHHHHh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-----YSVRTTVRSDPEQKRDLSFLTN--LPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
++.||.|+||+|.+|++++-.|++.+ ..+.+...+..........+.. ..........+.. .....+.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----Cccccccc
Confidence 56799999999999999999988653 2222333222222222222211 0001112222221 12344677
Q ss_pred ccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 77 AGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
+++|+||-++|.......+ ..+.++.|..-...+.+...++.
T Consensus 78 ~~~dvVVitag~~~~~g~s-r~dll~~N~~i~k~~~~~i~k~a 119 (154)
T d5mdha1 78 KDLDVAILVGSMPRRDGME-RKDLLKANVKIFKCQGAALDKYA 119 (154)
T ss_dssp TTCSEEEECCSCCCCTTCC-TTTTHHHHHHHHHHHHHHHHHHS
T ss_pred CCceEEEEecccCCCCCCc-hhHHHHHhHHHHHHHHHHHHhhC
Confidence 8999999999875542222 23668889998999988887753
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.93 E-value=1.7e-05 Score=56.92 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=50.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHH---Hhc--c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDA---AIA--G 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~---~~~--~ 78 (243)
...+|||+||+|.+|...++.+...|++|+++++ +++..+....+. .-+.+ |.++.+..++ ... +
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~-~~~~~~~~~~~G-------a~~vi--~~~~~~~~~~i~~~t~~~g 97 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG-TEEGQKIVLQNG-------AHEVF--NHREVNYIDKIKKYVGEKG 97 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT-------CSEEE--ETTSTTHHHHHHHHHCTTC
T ss_pred CCCEEEEEeccccccccccccccccCcccccccc-cccccccccccC-------ccccc--ccccccHHHHhhhhhccCC
Confidence 3568999999999999999999889999999998 554443333221 11222 5555543333 332 4
Q ss_pred ccEEEEeee
Q 026091 79 CTGVIHVAA 87 (243)
Q Consensus 79 ~d~vi~~a~ 87 (243)
+|+|+.+.+
T Consensus 98 ~d~v~d~~g 106 (174)
T d1yb5a2 98 IDIIIEMLA 106 (174)
T ss_dssp EEEEEESCH
T ss_pred ceEEeeccc
Confidence 899998864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.92 E-value=2.3e-05 Score=54.26 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=67.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCC-CCCCCeEEE-ecCCCChhhHHHHhccccEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLP-RASERLQIF-NADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~-~~D~~d~~~~~~~~~~~d~v 82 (243)
+||.|+|+ |.+|++++-.|+.++ .++.+++++..........+.... .......+. ..| .+ .++++|+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d---~~----~~~~advv 73 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN---YA----DTANSDVI 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---GG----GGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc---HH----HhcCCCEE
Confidence 58999995 999999999888887 588888873432222222221110 001122222 122 22 24578999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEe
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTS 128 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 128 (243)
|-+||...... ....+.++.|..-...+++...+++ .+.++.+-
T Consensus 74 vitag~~~~~~-~~r~dl~~~N~~i~~~i~~~i~k~~-p~aivivv 117 (142)
T d1uxja1 74 VVTSGAPRKPG-MSREDLIKVNADITRACISQAAPLS-PNAVIIMV 117 (142)
T ss_dssp EECCSCC----------CHHHHHHHHHHHHHHHGGGC-TTCEEEEC
T ss_pred EEeeeccCCcC-cchhHHHhHHHHHHHHHHHHHhccC-CCceEEEe
Confidence 99998654322 2234678889999999999999988 55555443
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=7.9e-06 Score=50.17 Aligned_cols=42 Identities=29% Similarity=0.418 Sum_probs=35.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL 46 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 46 (243)
+.++|+|+||+|.+|...++.+...|++|+++++ ++++.+.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~-s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC-CHHHHHHH
Confidence 3568999999999999999988889999999999 65444443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.90 E-value=2.7e-05 Score=54.56 Aligned_cols=73 Identities=16% Similarity=0.303 Sum_probs=56.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEEe
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIHV 85 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ 85 (243)
.|+|+| .|-+|..+++.|.+.|++|+++..+..........+. ..++.++.+|.+|++.++++ ++++++||-+
T Consensus 5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~-----~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh-----cCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence 588888 5999999999999999999999883332222222222 24789999999999999887 4678988855
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.89 E-value=4e-06 Score=61.20 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=51.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.|+||.|.| +|..|++++..|.+.|++|.+.+| +++..+.+..-...+...++++ ..-++.-..++.++++++|+||
T Consensus 6 ~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r-~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~ii 82 (189)
T d1n1ea2 6 YLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHM-NEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEIIL 82 (189)
T ss_dssp CEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECS-CHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCEE
T ss_pred eeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEe-cHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEEE
Confidence 467899999 799999999999999999999999 6654443332221111111111 1112222346788899999998
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
.+
T Consensus 83 ia 84 (189)
T d1n1ea2 83 FV 84 (189)
T ss_dssp EC
T ss_pred Ec
Confidence 65
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.89 E-value=2.6e-05 Score=56.32 Aligned_cols=76 Identities=18% Similarity=0.096 Sum_probs=51.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEe-cCCCChhhHHHHhc--ccc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN-ADLNNPESFDAAIA--GCT 80 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~--~~d 80 (243)
+..+|||+||+|.+|...++.....|++|++++| +++..+....+. .-+.+. -|-...+.+.+... ++|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~-~~~~~~~~~~~G-------a~~vi~~~~~~~~~~~~~~~~~~Gvd 100 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEKIAYLKQIG-------FDAAFNYKTVNSLEEALKKASPDGYD 100 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT-------CSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC-CHHHHHHHHhhh-------hhhhcccccccHHHHHHHHhhcCCCc
Confidence 3579999999999999999999889999999999 554443333221 122222 23223334444433 599
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
+|+++.|
T Consensus 101 ~v~D~vG 107 (182)
T d1v3va2 101 CYFDNVG 107 (182)
T ss_dssp EEEESSC
T ss_pred eeEEecC
Confidence 9999865
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.88 E-value=2e-05 Score=56.38 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=49.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|+|+||+|.+|...++.+...|.+|+++++ +++..+.+..+.. . +.+ |..+........+++|+|+
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~-~~~~~~~~~~lGa------~-~~i--~~~~~~~~~~~~~g~D~v~ 96 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEKLALPLALGA------E-EAA--TYAEVPERAKAWGGLDLVL 96 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGGSHHHHHTTC------S-EEE--EGGGHHHHHHHTTSEEEEE
T ss_pred CCCEEEEEeccccchhhhhhhhcccccccccccc-ccccccccccccc------c-eee--ehhhhhhhhhccccccccc
Confidence 4578999999999999999999889999999998 5544433332211 1 222 3333332223345799999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+.|
T Consensus 97 d~~G 100 (171)
T d1iz0a2 97 EVRG 100 (171)
T ss_dssp ECSC
T ss_pred cccc
Confidence 9765
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=5.5e-05 Score=49.87 Aligned_cols=68 Identities=12% Similarity=0.128 Sum_probs=53.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
..+||.|.| +|.+|+-++.+..+.|++|++++.+....... -.-+++.+|+.|.+.+.++.. ++|+
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~-----------va~~~i~~~~~d~~~l~~~~~~~~~Dv 77 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH-----------VAHRSHVINMLDGDALRRVVELEKPHY 77 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-----------GSSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh-----------cCCeEEECCCCCHHHHHHHHHhhCCce
Confidence 346899999 79999999999999999999999843322211 134788899999999999885 4688
Q ss_pred EE
Q 026091 82 VI 83 (243)
Q Consensus 82 vi 83 (243)
|-
T Consensus 78 iT 79 (111)
T d1kjqa2 78 IV 79 (111)
T ss_dssp EE
T ss_pred EE
Confidence 74
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.87 E-value=7e-06 Score=58.12 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=52.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.++|+|+|+ |-+|..+++.|...|. ++++..| +......+.. .. +.+. .+.+++.+.+.++|+|
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nR-t~~ka~~l~~--~~-----~~~~-----~~~~~~~~~l~~~Div 88 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYERAVELAR--DL-----GGEA-----VRFDELVDHLARSDVV 88 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHHHHHHHH--HH-----TCEE-----CCGGGHHHHHHTCSEE
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcC-cHHHHHHHHH--hh-----hccc-----ccchhHHHHhccCCEE
Confidence 5689999996 9999999999999997 6888888 5433322221 11 2222 3456888888999999
Q ss_pred EEeeeccC
Q 026091 83 IHVAAPID 90 (243)
Q Consensus 83 i~~a~~~~ 90 (243)
|.+.+...
T Consensus 89 i~atss~~ 96 (159)
T d1gpja2 89 VSATAAPH 96 (159)
T ss_dssp EECCSSSS
T ss_pred EEecCCCC
Confidence 99976433
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.79 E-value=2.7e-05 Score=57.33 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=48.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeE-E-----EecCCCChhhHHHHhccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQ-I-----FNADLNNPESFDAAIAGC 79 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~D~~d~~~~~~~~~~~ 79 (243)
|||.|.| .|++|..++..|+++|++|++++. ++...+.+..-.. +....... . ....+.-..++.++++++
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~-n~~~i~~ln~g~~-p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 77 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV-SSTKIDLINQGKS-PIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeC-CHHHHHHhcccCC-cccchhhhhhhhhhhcccccccCCCHHHHHhhC
Confidence 4799998 899999999999999999999998 5533322221100 00000000 0 000111224556677788
Q ss_pred cEEEEeeecc
Q 026091 80 TGVIHVAAPI 89 (243)
Q Consensus 80 d~vi~~a~~~ 89 (243)
|+++.+....
T Consensus 78 d~i~i~VpTP 87 (202)
T d1mv8a2 78 DVSFICVGTP 87 (202)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEecCcc
Confidence 9999887653
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=3.1e-05 Score=55.70 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=52.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh---hHHHHhc--cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE---SFDAAIA--GC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~ 79 (243)
.++|+|+||+|.+|..+++.+...|.+|+++++ ++++.+.+..+.. -+.+ |.++++ .+.++.+ ++
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~-s~~k~~~~~~lGa-------~~vi--~~~~~d~~~~v~~~t~g~g~ 98 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQKAQSALKAGA-------WQVI--NYREEDLVERLKEITGGKKV 98 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHTC-------SEEE--ETTTSCHHHHHHHHTTTCCE
T ss_pred CCEEEEEccccccchHHHHHHHHhCCeEeeccc-chHHHHHHHhcCC-------eEEE--ECCCCCHHHHHHHHhCCCCe
Confidence 569999999999999999998889999999999 6655444443321 1233 555544 3444433 47
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+|+.+.+.
T Consensus 99 d~v~d~~g~ 107 (179)
T d1qora2 99 RVVYDSVGR 107 (179)
T ss_dssp EEEEECSCG
T ss_pred EEEEeCccH
Confidence 999988753
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.76 E-value=2.3e-05 Score=56.30 Aligned_cols=74 Identities=22% Similarity=0.361 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--ccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI--AGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~v 82 (243)
..+|||+||+|.+|+..++.+...|.+|++.++ ++++.+....+.. . ..+..+-.+.+.+ +.. +++|+|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~-s~~k~~~~~~lGa------~-~vi~~~~~~~~~~-~~~~~~gvD~v 102 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLGA------K-EVLAREDVMAERI-RPLDKQRWAAA 102 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CTTCHHHHHHTTC------S-EEEECC----------CCSCCEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCceEEecC-chHHHHHHHhccc------c-eeeecchhHHHHH-HHhhccCcCEE
Confidence 468999999999999999998889999999998 5544444443321 1 2332221112222 222 258999
Q ss_pred EEeee
Q 026091 83 IHVAA 87 (243)
Q Consensus 83 i~~a~ 87 (243)
+.+.|
T Consensus 103 id~vg 107 (176)
T d1xa0a2 103 VDPVG 107 (176)
T ss_dssp EECST
T ss_pred EEcCC
Confidence 98865
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.74 E-value=9.9e-05 Score=51.40 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=70.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..||.|+|+ |.+|++++-.|...+ .++.+++++..........+... ............+ +. +.++++|+|
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv 75 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV 75 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence 358999995 999999998777776 57888887433222222222111 0011122222221 22 345678999
Q ss_pred EEeeeccCCC----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 83 IHVAAPIDIH----GKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 83 i~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
|-+++..... ......+.+..|......+.+..++.+ .+.++.+
T Consensus 76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aiviv 123 (150)
T d1t2da1 76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIV 123 (150)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 9999864431 112344778899999999999999998 5554444
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=9.2e-05 Score=55.13 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=53.7
Q ss_pred CCCeEEEecC----------------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGG----------------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 67 (243)
++++||||+| ||..|.+|++++..+|++|+++..... .. ....+..+...-.
T Consensus 5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~-~~-----------~p~~~~~~~~~t~ 72 (223)
T d1u7za_ 5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----------TPPFVKRVDVMTA 72 (223)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----------CCTTEEEEECCSH
T ss_pred CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc-cC-----------cccccccceehhh
Confidence 5789999986 799999999999999999999987322 11 1124555544321
Q ss_pred -C-hhhHHHHhccccEEEEeeeccCC
Q 026091 68 -N-PESFDAAIAGCTGVIHVAAPIDI 91 (243)
Q Consensus 68 -d-~~~~~~~~~~~d~vi~~a~~~~~ 91 (243)
+ .+.+.+.++++|++|++|++...
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred HHHHHHHHhhhccceeEeeeechhhh
Confidence 1 24455556789999999987543
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=3e-05 Score=54.94 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=30.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
|||+|+|+ |.+|+.++..|++.|++|.++.|+.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~ 33 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVP 33 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCH
Confidence 48999995 9999999999999999999999943
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.68 E-value=3e-05 Score=54.93 Aligned_cols=64 Identities=20% Similarity=0.243 Sum_probs=45.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
|++|.++| .|.+|+.+++.|++.||+|.+..| ++...+.+... . ........++++.+|+|+-
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~-~~~~~~~~~~~--------~-------~~~~~~~~e~~~~~diii~ 63 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQSAVDGLVAA--------G-------ASAARSARDAVQGADVVIS 63 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHT--------T-------CEECSSHHHHHTSCSEEEE
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEEC-chhhhhhhhhh--------h-------ccccchhhhhccccCeeee
Confidence 56899999 899999999999999999999999 55433332211 1 1112345567777787775
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 64 ~ 64 (162)
T d3cuma2 64 M 64 (162)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.66 E-value=2.1e-05 Score=54.64 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=27.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC---eEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r 37 (243)
+++|.|.||||++|..+++.|.+++| ++..++.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 46899999999999999999976653 6766655
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.66 E-value=5.8e-05 Score=54.34 Aligned_cols=73 Identities=21% Similarity=0.133 Sum_probs=50.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHh--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAI--AGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~--~~~ 79 (243)
..+|||+||+|.+|...++.+...|.+|+++++ +++..+.+. +. + ..+.+ |..++ +.+.+.. +++
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~-~~~~~~~l~---~~---G-a~~vi--~~~~~~~~~~v~~~t~~~g~ 95 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SDAKREMLS---RL---G-VEYVG--DSRSVDFADEILELTDGYGV 95 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHH---TT---C-CSEEE--ETTCSTHHHHHHHHTTTCCE
T ss_pred CCEEEEECCCCCcccccchhhccccccceeeec-ccccccccc---cc---c-ccccc--cCCccCHHHHHHHHhCCCCE
Confidence 578999999999999999999889999999998 554443333 32 1 12222 34444 3444443 358
Q ss_pred cEEEEeee
Q 026091 80 TGVIHVAA 87 (243)
Q Consensus 80 d~vi~~a~ 87 (243)
|+|+.+.+
T Consensus 96 d~v~d~~g 103 (183)
T d1pqwa_ 96 DVVLNSLA 103 (183)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 99999875
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.65 E-value=2.3e-05 Score=55.61 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=31.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
|||.|+| +|.+|+.+++.|.+.|++|.+.+| +++..
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~-~~~~~ 36 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSR-QQSTC 36 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEEC-CchHH
Confidence 3799998 699999999999999999999999 55433
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.65 E-value=0.0003 Score=44.89 Aligned_cols=71 Identities=23% Similarity=0.292 Sum_probs=47.9
Q ss_pred CCCCeEEEecCchhhH-HHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 3 EEKGRVCVTGGTGFIG-SWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+.|+|.++| -|.+| ++|++.|.++|++|.+.++........ +.. .++.+..++- ++ .+++.|.
T Consensus 6 ~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~---L~~-----~Gi~v~~g~~--~~----~i~~~d~ 70 (96)
T d1p3da1 6 RRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQR---LAQ-----AGAKIYIGHA--EE----HIEGASV 70 (96)
T ss_dssp TTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHH---HHH-----TTCEEEESCC--GG----GGTTCSE
T ss_pred hhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhH---HHH-----CCCeEEECCc--cc----cCCCCCE
Confidence 3568999998 45556 888999999999999999854433222 222 2566655442 22 2357899
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||...|.
T Consensus 71 vV~S~AI 77 (96)
T d1p3da1 71 VVVSSAI 77 (96)
T ss_dssp EEECTTS
T ss_pred EEECCCc
Confidence 9988765
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.00025 Score=44.97 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=47.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
++|+|+|.|. |-.|..+++.|.++|++|++.+.+..... ...+ .....++.+... ...++++|.||
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~------~~~~~~~~~~~~-----~~~~~~~d~vi 69 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKL------PEAVERHTGSLN-----DEWLMAADLIV 69 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGS------CTTSCEEESBCC-----HHHHHHCSEEE
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHH------hhccceeecccc-----hhhhccCCEEE
Confidence 5789999995 88999999999999999999988433111 1111 123344444422 23456789999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
.+-|.
T Consensus 70 ~SPGi 74 (93)
T d2jfga1 70 ASPGI 74 (93)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 87665
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.62 E-value=4.6e-05 Score=54.94 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=49.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcC-CCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNL-PRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
|+|.|.| +|..|.+++..|.+.|++|.+.+| ..+.. ....+... ............++.-..++.++++++|+||.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r-~~~~~-~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~ 77 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGT-EFDTE-ILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECC-GGGHH-HHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEe-cccHH-HHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence 4799999 799999999999999999999998 32211 11111110 00001111112223345678889999999986
Q ss_pred ee
Q 026091 85 VA 86 (243)
Q Consensus 85 ~a 86 (243)
+.
T Consensus 78 av 79 (180)
T d1txga2 78 GV 79 (180)
T ss_dssp CS
T ss_pred cc
Confidence 53
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.57 E-value=7.4e-05 Score=53.11 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=50.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
...+|+|.|+ |.+|...++.+...|.+|+++++ +++..+....+.. -+.+.. ..+.+..+...+++|.++
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~-~~~k~~~a~~lGa-------~~~i~~-~~~~~~~~~~~~~~d~vi 96 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMGA-------DHYIAT-LEEGDWGEKYFDTFDLIV 96 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC-------SEEEEG-GGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhcccccccccc-chhHHHHhhccCC-------cEEeec-cchHHHHHhhhcccceEE
Confidence 3578999995 99999999988888999999999 5544444443321 122221 123344445556789999
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
.+.+..
T Consensus 97 ~~~~~~ 102 (168)
T d1piwa2 97 VCASSL 102 (168)
T ss_dssp ECCSCS
T ss_pred EEecCC
Confidence 887643
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.55 E-value=2e-05 Score=56.18 Aligned_cols=44 Identities=36% Similarity=0.468 Sum_probs=35.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL 49 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 49 (243)
..+|||+||+|.+|...++.....|++|+++++ ++++.+.+..+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~~~~l 67 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG-NREAADYLKQL 67 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEES-SSSTHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEec-CHHHHHHHHhh
Confidence 347999999999999999988888999999999 55444444443
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.52 E-value=0.00022 Score=50.60 Aligned_cols=75 Identities=20% Similarity=0.102 Sum_probs=50.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC--CChhhHHHHh-----c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL--NNPESFDAAI-----A 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~-----~ 77 (243)
..+|+|+| +|.+|...++.+...|.+|+++++ ++.+.+....+.. . ..+..|- .+...+.+.+ +
T Consensus 27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~-~~~r~~~a~~~ga------~-~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (170)
T d1e3ja2 27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTAR-SPRRLEVAKNCGA------D-VTLVVDPAKEEESSIIERIRSAIGD 97 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHTTC------S-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCEEEEEc-ccccchhhHhhHhhhcccccccch-HHHHHHHHHHcCC------c-EEEeccccccccchhhhhhhccccc
Confidence 56899998 799999999999889999999999 6655444443321 2 2233332 3334443333 2
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|+||.+++.
T Consensus 98 g~D~vid~~g~ 108 (170)
T d1e3ja2 98 LPNVTIDCSGN 108 (170)
T ss_dssp CCSEEEECSCC
T ss_pred CCceeeecCCC
Confidence 58999999763
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=4.6e-05 Score=54.78 Aligned_cols=43 Identities=30% Similarity=0.401 Sum_probs=35.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL 49 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 49 (243)
.+|||+||+|.+|+..++.....|++|++++| ++++.+.+..+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~-~~~k~~~~~~l 75 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEYLKSL 75 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHHHHHH
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEec-chhHHHHHHhh
Confidence 48999999999999999999889999999999 66555444433
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.47 E-value=6.7e-05 Score=53.00 Aligned_cols=63 Identities=25% Similarity=0.391 Sum_probs=45.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+||.|+| .|.+|+.+++.|++.|++|++.+| +++..+.+. .. .... ..+..++++++|+|+-+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~-~~~~~~~~~---~~-----~~~~-------~~~~~e~~~~~d~ii~~ 63 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPEAIADVI---AA-----GAET-------ASTAKAIAEQCDVIITM 63 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHH---HT-----TCEE-------CSSHHHHHHHCSEEEEC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeC-CcchhHHHH---Hh-----hhhh-------cccHHHHHhCCCeEEEE
Confidence 3699999 899999999999999999999999 654433332 11 2221 13456677788988866
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.45 E-value=7.3e-05 Score=53.20 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=30.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeCCchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRSDPEQK 43 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~ 43 (243)
||+|+|+| +|.+|+.+++.|.+.|+ +|++.+| +++..
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~-~~~~~ 39 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-NPESI 39 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-CHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEEC-ChHHH
Confidence 56899998 79999999999999985 6777777 55433
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00022 Score=50.57 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=53.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
...+|+|.|+ |.+|...++.+...|++++++++ ++...+....+.. .+. .|..+.+......+++|++|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~-~~~~~~~a~~lGa-------d~~--i~~~~~~~~~~~~~~~D~vi 98 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALGA-------DEV--VNSRNADEMAAHLKSFDFIL 98 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHTC-------SEE--EETTCHHHHHTTTTCEEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhcc-chhHHHHHhccCC-------cEE--EECchhhHHHHhcCCCceee
Confidence 3578999985 88999999999889999998888 5544444443321 122 35666666666667899999
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
.+.+.
T Consensus 99 d~~g~ 103 (168)
T d1uufa2 99 NTVAA 103 (168)
T ss_dssp ECCSS
T ss_pred eeeec
Confidence 98763
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.42 E-value=9.1e-05 Score=53.27 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=27.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTV 36 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~ 36 (243)
|+||.|.|||||+|..+++.|.++ ..++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 569999999999999999999887 46776554
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.42 E-value=0.00044 Score=45.49 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=62.0
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
.+.|+|+|+| .|.+|..-++.|++.|.+|++++....... ..+.. ..+++++..+..+.+ +++++.|
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~---~~~~~----~~~i~~~~~~~~~~d-----l~~~~lv 76 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQF---TVWAN----EGMLTLVEGPFDETL-----LDSCWLA 76 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHH---HHHHT----TTSCEEEESSCCGGG-----GTTCSEE
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHH---HHHHh----cCCceeeccCCCHHH-----hCCCcEE
Confidence 3679999999 799999999999999999999887333221 11111 246788887766432 4567877
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+.+.. ++. . ...+.+.|++.+ .+|++..
T Consensus 77 ~~at~-------d~~-----~----n~~i~~~a~~~~---ilVNv~D 104 (113)
T d1pjqa1 77 IAATD-------DDT-----V----NQRVSDAAESRR---IFCNVVD 104 (113)
T ss_dssp EECCS-------CHH-----H----HHHHHHHHHHTT---CEEEETT
T ss_pred eecCC-------CHH-----H----HHHHHHHHHHcC---CEEEeCC
Confidence 74421 211 1 235667777777 4666543
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.38 E-value=0.0001 Score=50.98 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=25.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC----CeEEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG----YSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g----~~V~~~~r 37 (243)
+||.|+|||||+|..+++.|++.. .++..++.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss 36 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST 36 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence 379999999999999999888643 35555554
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=8.8e-05 Score=53.05 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=27.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
|.||.|.||||++|..+++.|.++- .++..+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s 34 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS 34 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence 4699999999999999999998764 56666654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.34 E-value=0.00049 Score=49.32 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=48.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh----HHHHhc--
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES----FDAAIA-- 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~-- 77 (243)
..+|+|+|| |.+|...++.+...|+ +|+++++ ++...+....+. .-..+...=.+... +.+...
T Consensus 29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~-~~~~~~~a~~lG-------a~~vi~~~~~~~~~~~~~i~~~~~~~ 99 (182)
T d1vj0a2 29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAG-SPNRLKLAEEIG-------ADLTLNRRETSVEERRKAIMDITHGR 99 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEES-CHHHHHHHHHTT-------CSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCEEEEECC-Cccchhheeccccccccccccccc-cccccccccccc-------ceEEEeccccchHHHHHHHHHhhCCC
Confidence 478999996 9999999999999997 7999998 665554444331 11333222223222 222222
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|+||.+.|.
T Consensus 100 g~Dvvid~vG~ 110 (182)
T d1vj0a2 100 GADFILEATGD 110 (182)
T ss_dssp CEEEEEECSSC
T ss_pred CceEEeecCCc
Confidence 48999988754
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.0003 Score=49.96 Aligned_cols=72 Identities=18% Similarity=0.227 Sum_probs=47.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+|+|.| +|..+++++-.|.+.|.+|+++.| +.+..+.+.. +.. ...++.+..| +.+ ..++|.|
T Consensus 17 ~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nR-t~~ka~~l~~~~~~----~~~~~~~~~~--~~~-----~~~~dli 83 (170)
T d1nyta1 17 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNR-TVSRAEELAKLFAH----TGSIQALSMD--ELE-----GHEFDLI 83 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHHTGG----GSSEEECCSG--GGT-----TCCCSEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHhcccceEEEeccc-hHHHHHHHHHHHhh----cccccccccc--ccc-----cccccee
Confidence 568999999 699999999999999999999999 5544333222 221 1233433322 211 2468999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 84 IN~Tp~ 89 (170)
T d1nyta1 84 INATSS 89 (170)
T ss_dssp EECCSC
T ss_pred eccccc
Confidence 999743
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.26 E-value=0.00018 Score=50.17 Aligned_cols=65 Identities=18% Similarity=0.155 Sum_probs=45.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+||.++| +|.+|+++++.|++.|++|++..| +.+....+.. .. ++.. ..+..++++++|+|+-+
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r-~~~~~~~l~~--~~-----g~~~-------~~~~~~~~~~~dvIila 64 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGS-SLERSKEIAE--QL-----ALPY-------AMSHQDLIDQVDLVILG 64 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-SHHHHHHHHH--HH-----TCCB-------CSSHHHHHHTCSEEEEC
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcC-hHHhHHhhcc--cc-----ceee-------echhhhhhhccceeeee
Confidence 3799998 899999999999999999999988 5543333221 11 1111 12456777889998866
Q ss_pred e
Q 026091 86 A 86 (243)
Q Consensus 86 a 86 (243)
.
T Consensus 65 v 65 (152)
T d2ahra2 65 I 65 (152)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00095 Score=47.19 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=51.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----c
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----G 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~ 78 (243)
..+|+|.|+ |.+|...++.+...|+ +|+++++ ++...+..+.+. .-+.+..+-.+.....+.++ +
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~-~~~rl~~a~~~G-------a~~~~~~~~~~~~~~~~~~~~~~g~g 97 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDL-SATRLSKAKEIG-------ADLVLQISKESPQEIARKVEGQLGCK 97 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHTT-------CSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CCEEEEECC-CccHHHHHHHHHHcCCceEEeccC-CHHHHHHHHHhC-------CcccccccccccccccccccccCCCC
Confidence 468999985 9999999999988997 7888888 665444443321 12444444455555555443 5
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+||.+.|.
T Consensus 98 ~Dvvid~~G~ 107 (171)
T d1pl8a2 98 PEVTIECTGA 107 (171)
T ss_dssp CSEEEECSCC
T ss_pred ceEEEeccCC
Confidence 8999998763
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.17 E-value=0.00018 Score=50.19 Aligned_cols=64 Identities=22% Similarity=0.237 Sum_probs=43.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+||.|+| +|.+|+.+++.|++.|++|.+..|++.... ..... .. ++ .++..++++++|+||-+
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~-~~-----~~---------~~~~~e~~~~~diIi~~ 63 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPST-IERAR-TV-----GV---------TETSEEDVYSCPVVISA 63 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHH-HHHHH-HH-----TC---------EECCHHHHHTSSEEEEC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHH-HHhhh-cc-----cc---------cccHHHHHhhcCeEEEE
Confidence 3799998 899999999999999999988887443222 11111 00 11 12345678889999866
Q ss_pred e
Q 026091 86 A 86 (243)
Q Consensus 86 a 86 (243)
.
T Consensus 64 v 64 (152)
T d1i36a2 64 V 64 (152)
T ss_dssp S
T ss_pred e
Confidence 3
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.16 E-value=0.00054 Score=49.12 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=46.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|.| .|.||+.+++.|..-|.+|.+.+|+..+ . +..-.+++.++++.+|+|+
T Consensus 41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~-~---------------------~~~~~~~l~ell~~sDiv~ 97 (181)
T d1qp8a1 41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE-G---------------------PWRFTNSLEEALREARAAV 97 (181)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC-S---------------------SSCCBSCSHHHHTTCSEEE
T ss_pred cCceEEEec-cccccccceeeeeccccccccccccccc-c---------------------ceeeeechhhhhhccchhh
Confidence 468999999 8999999999999999999999883321 0 1111236788999999988
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 98 ~~~ 100 (181)
T d1qp8a1 98 CAL 100 (181)
T ss_dssp ECC
T ss_pred ccc
Confidence 654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.15 E-value=0.0027 Score=42.62 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=57.1
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccc
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGC 79 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 79 (243)
++++|.|+||| +..|..+.+.|.+.| ++|+.+..+.. ... ++. ..-++.| +-..+
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~----~i~----------G~~-~y~sl~d------lp~~v 65 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE----EVQ----------GVK-AYKSVKD------IPDEI 65 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS----EET----------TEE-CBSSTTS------CSSCC
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcc----ccC----------CeE-eecchhh------cCCCC
Confidence 57899999998 999999999987765 68887766222 110 111 1223333 33457
Q ss_pred cEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 80 TGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
|.++-+.. . + .+..+++.+.+.| ++.++.+|+
T Consensus 66 Dlvvi~vp---------~-~-------~~~~~~~~~~~~g-~~~~vi~s~ 97 (129)
T d2csua1 66 DLAIIVVP---------K-R-------FVKDTLIQCGEKG-VKGVVIITA 97 (129)
T ss_dssp SEEEECSC---------H-H-------HHHHHHHHHHHHT-CCEEEECCC
T ss_pred ceEEEecC---------h-H-------HhHHHHHHHHHcC-CCEEEEecc
Confidence 88775521 1 1 1346788888999 888888876
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.13 E-value=0.0005 Score=48.62 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=48.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh-----cc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI-----AG 78 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~ 78 (243)
..+|+|+|++|.+|...++.+...| .+|+++.+ ++...+..+.+.. -+.+. .++.+..++.. ++
T Consensus 28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~-~~~~~~~~~~~Ga-------~~~i~--~~~~~~~~~~~~~~~~~~ 97 (170)
T d1jvba2 28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-REEAVEAAKRAGA-------DYVIN--ASMQDPLAEIRRITESKG 97 (170)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SHHHHHHHHHHTC-------SEEEE--TTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEEeccccceeeeeeccccccccccccccc-chhhHHHHHHcCC-------ceeec--cCCcCHHHHHHHHhhccc
Confidence 4689999999999999999998888 57888887 6644444443311 13333 33333333333 24
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|+++.+++.
T Consensus 98 ~d~vid~~g~ 107 (170)
T d1jvba2 98 VDAVIDLNNS 107 (170)
T ss_dssp EEEEEESCCC
T ss_pred chhhhccccc
Confidence 8999998763
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.10 E-value=0.00034 Score=47.20 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=51.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHH-hccccEEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAA-IAGCTGVIH 84 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~ 84 (243)
|-|+|.| .|-+|..+++.| ++++|.++.. ++.....+ .. .++.++.+|.++++.|.++ +++++.+|-
T Consensus 1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~-d~~~~~~~---~~-----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~ 68 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLREL--RGSEVFVLAE-DENVRKKV---LR-----SGANFVHGDPTRVSDLEKANVRGARAVIV 68 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTS--CGGGEEEEES-CTTHHHHH---HH-----TTCEEEESCTTSHHHHHHTTCTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEc-chHHHHHH---Hh-----cCccccccccCCHHHHHHhhhhcCcEEEE
Confidence 4578888 689999999998 4677888887 54333222 22 3789999999999999987 467888875
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 69 ~ 69 (129)
T d2fy8a1 69 N 69 (129)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.08 E-value=0.00066 Score=48.16 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=48.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
+.|+|+|.| +|..+++++..|.+.+.+|+++.| +.+....+ ..+.. ...+.....|-. .+..+|+|
T Consensus 17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR-~~~~a~~l~~~~~~----~~~~~~~~~~~~-------~~~~~dii 83 (171)
T d1p77a1 17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANR-TFSKTKELAERFQP----YGNIQAVSMDSI-------PLQTYDLV 83 (171)
T ss_dssp TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEES-SHHHHHHHHHHHGG----GSCEEEEEGGGC-------CCSCCSEE
T ss_pred CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccc-hHHHHHHHHHHHhh----ccccchhhhccc-------ccccccee
Confidence 468999999 689999999999988889999999 55433332 22221 124444444422 13568999
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
||+...
T Consensus 84 IN~tp~ 89 (171)
T d1p77a1 84 INATSA 89 (171)
T ss_dssp EECCCC
T ss_pred eecccc
Confidence 999654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.07 E-value=0.00016 Score=52.14 Aligned_cols=34 Identities=24% Similarity=0.549 Sum_probs=27.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
++.||.|.|||||+|..+++.|.++- .++..+.-
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S 38 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA 38 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence 34589999999999999999998764 46666643
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.00 E-value=0.0011 Score=47.55 Aligned_cols=76 Identities=20% Similarity=0.083 Sum_probs=44.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHh-ccccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAI-AGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~-~~~d~vi 83 (243)
++|||+||+|.+|+..++.....|.++++.+.++++....+. ... .....+...-.+. +.+.++. +++|+|+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~--~~~----gad~vi~~~~~~~~~~~~~~~~~GvDvv~ 105 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLT--SEL----GFDAAVNYKTGNVAEQLREACPGGVDVYF 105 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHH--HHS----CCSEEEETTSSCHHHHHHHHCTTCEEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhh--hcc----cceEEeeccchhHHHHHHHHhccCceEEE
Confidence 679999999999999999888789765554442443322221 111 1223333322222 2333333 2699999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+.|
T Consensus 106 D~vG 109 (187)
T d1vj1a2 106 DNVG 109 (187)
T ss_dssp ESSC
T ss_pred ecCC
Confidence 8865
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.99 E-value=0.00044 Score=49.34 Aligned_cols=72 Identities=17% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++|.|+| .|.+|+++++.|++.|++|.+..| +++..+.+...... ..... .....+.+.+.+..+|.++-
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~---~~~~~----~a~~~~~~~~~~~~~~~ii~ 72 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNR-TVSKVDDFLANEAK---GTKVL----GAHSLEEMVSKLKKPRRIIL 72 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-STHHHHHHHHTTTT---TSSCE----ECSSHHHHHHHBCSSCEEEE
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHHHhccc---ccccc----chhhhhhhhhhhcccceEEE
Confidence 36899999 899999999999999999999999 55433332211100 00111 13356677777778888775
Q ss_pred e
Q 026091 85 V 85 (243)
Q Consensus 85 ~ 85 (243)
+
T Consensus 73 ~ 73 (176)
T d2pgda2 73 L 73 (176)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.94 E-value=0.0041 Score=38.73 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=45.7
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 85 (243)
+||.++|-.|-==+.|++.|.++|+.|.+-++......+ .|... ++++..+ .+++. ++++|.||..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~-----Gi~i~~g--h~~~~----i~~~d~vV~S 67 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKL-----GIPIFVP--HSADN----WYDPDLVIKT 67 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHT-----TCCEESS--CCTTS----CCCCSEEEEC
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHC-----CCeEEee--ecccc----cCCCCEEEEe
Confidence 478888854443357899999999999999985443333 34333 5665544 22222 2568999988
Q ss_pred eecc
Q 026091 86 AAPI 89 (243)
Q Consensus 86 a~~~ 89 (243)
.|..
T Consensus 68 sAI~ 71 (89)
T d1j6ua1 68 PAVR 71 (89)
T ss_dssp TTCC
T ss_pred cCcC
Confidence 7763
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.93 E-value=0.00063 Score=50.95 Aligned_cols=38 Identities=37% Similarity=0.475 Sum_probs=33.0
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
|+...|||+|+| .|..|...+..|.++|++|.++.|+.
T Consensus 2 ~~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 2 MMHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 444567999999 69999999999999999999999843
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.93 E-value=0.0011 Score=46.38 Aligned_cols=77 Identities=19% Similarity=0.216 Sum_probs=58.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+-+++|.| .|-.|..-++.+...|.+|.++++ +.+..++++.... ..++. -..+.+.+.+.++++|+||.
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~-~~~~l~~l~~~~~-----~~~~~---~~~~~~~l~~~~~~aDivI~ 101 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVEL---LYSNSAEIETAVAEADLLIG 101 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeC-cHHHHHHHHHhhc-----cccee---ehhhhhhHHHhhccCcEEEE
Confidence 56899999 699999999999999999999999 6655444443321 12222 34577889999999999999
Q ss_pred eeeccCC
Q 026091 85 VAAPIDI 91 (243)
Q Consensus 85 ~a~~~~~ 91 (243)
++-....
T Consensus 102 aalipG~ 108 (168)
T d1pjca1 102 AVLVPGR 108 (168)
T ss_dssp CCCCTTS
T ss_pred eeecCCc
Confidence 8865443
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.92 E-value=0.00029 Score=49.23 Aligned_cols=24 Identities=33% Similarity=0.493 Sum_probs=21.7
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY 30 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~ 30 (243)
||.|+|||||+|..+++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988754
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.92 E-value=0.00084 Score=48.74 Aligned_cols=63 Identities=19% Similarity=0.099 Sum_probs=45.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|.| .|.||+.+++.|..-|.+|.+.++...... .. +.....++.++++++|+|+
T Consensus 42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~-~~------------------~~~~~~~l~~~l~~sDii~ 101 (197)
T d1j4aa1 42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPEL-EK------------------KGYYVDSLDDLYKQADVIS 101 (197)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH------------------TTCBCSCHHHHHHHCSEEE
T ss_pred cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccc-cc------------------ceeeecccccccccccccc
Confidence 468999999 899999999999999999999887332111 00 1122346778888889877
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 102 ~~~ 104 (197)
T d1j4aa1 102 LHV 104 (197)
T ss_dssp ECS
T ss_pred ccC
Confidence 654
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.88 E-value=0.00099 Score=43.97 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+++++|.| .|++|..++..|.+.|.+|+++.|.
T Consensus 21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~ 54 (117)
T d1ebda2 21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGA 54 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEEC-CCccceeeeeeecccccEEEEEEec
Confidence 468999999 6999999999999999999999983
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.87 E-value=0.0029 Score=44.71 Aligned_cols=74 Identities=11% Similarity=0.101 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhh---HHHHhc-ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPES---FDAAIA-GCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~-~~d 80 (243)
..+|+|.|+ |.+|...++.+...|++++++..+++...+..+.+. ..+++ |.++.+. +.++.. ++|
T Consensus 29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~G-------a~~~i--~~~~~~~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG-------ATHVI--NSKTQDPVAAIKEITDGGVN 98 (174)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT-------CSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcC-------CeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence 468999996 999999999888889876655543665444444332 12444 3344333 333333 489
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+||.+.+.
T Consensus 99 ~vid~~G~ 106 (174)
T d1f8fa2 99 FALESTGS 106 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCc
Confidence 99998763
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.87 E-value=0.00055 Score=49.38 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=47.9
Q ss_pred CeEEE-ecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC---CCCh-hhHHHHh----
Q 026091 6 GRVCV-TGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD---LNNP-ESFDAAI---- 76 (243)
Q Consensus 6 k~ilv-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D---~~d~-~~~~~~~---- 76 (243)
.+++| +||+|.+|...++.....|.+|++++|++....+....+.+. ..-..+..| ..+. +.+.++.
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l----Gad~vi~~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL----GATQVITEDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH----TCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc----cccEEEeccccchhHHHHHHHHHHhhcc
Confidence 45666 699999999999988888999999998555444333333333 112333332 2221 1233332
Q ss_pred ccccEEEEeee
Q 026091 77 AGCTGVIHVAA 87 (243)
Q Consensus 77 ~~~d~vi~~a~ 87 (243)
.++|+|+.+.+
T Consensus 106 ~~vdvv~D~vg 116 (189)
T d1gu7a2 106 GEAKLALNCVG 116 (189)
T ss_dssp CCEEEEEESSC
T ss_pred CCceEEEECCC
Confidence 25899998754
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.86 E-value=0.0016 Score=45.91 Aligned_cols=40 Identities=15% Similarity=0.359 Sum_probs=32.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRD 45 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~ 45 (243)
+.|+|+|.| +|+.+++++..|.+.|. +|.++.| +.+....
T Consensus 16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR-~~~ka~~ 56 (167)
T d1npya1 16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYAR-NVKTGQY 56 (167)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECS-CHHHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecc-cHHHHHH
Confidence 467899999 69999999999999995 7888888 6544433
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.86 E-value=0.00071 Score=48.71 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=31.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+-++|.|+|| |.+|+.++..++..|++|++.++ +++
T Consensus 3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~-~~~ 38 (186)
T d1wdka3 3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDI-NEH 38 (186)
T ss_dssp CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECS-SHH
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEEC-CHH
Confidence 3578999995 99999999999999999999999 543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.85 E-value=0.0011 Score=43.98 Aligned_cols=35 Identities=29% Similarity=0.257 Sum_probs=32.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
.+++++|+| +|+||-.++..|.+.|.+|+++.|++
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence 468999999 69999999999999999999999843
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.84 E-value=0.00091 Score=44.57 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=31.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
.+++++|.| .|++|..++..|.+.|.+|+++.|
T Consensus 22 ~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~ 54 (122)
T d1v59a2 22 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEF 54 (122)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEe
Confidence 468999999 699999999999999999999998
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.83 E-value=0.00089 Score=48.43 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=46.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|++.|.| .|.||+.+++.|..-|.+|.+.++......... .++....++.++++.+|+|+
T Consensus 48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-----------------~~~~~~~~l~~ll~~sD~i~ 109 (193)
T d1mx3a1 48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA-----------------LGLQRVSTLQDLLFHSDCVT 109 (193)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH-----------------HTCEECSSHHHHHHHCSEEE
T ss_pred eCceEEEec-cccccccceeeeeccccceeeccCcccccchhh-----------------hccccccchhhccccCCEEE
Confidence 468999999 899999999999999999999888433211110 01223346778888888876
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 110 ~~~ 112 (193)
T d1mx3a1 110 LHC 112 (193)
T ss_dssp ECC
T ss_pred Eee
Confidence 554
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.80 E-value=0.0029 Score=44.24 Aligned_cols=41 Identities=17% Similarity=0.094 Sum_probs=33.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhh
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLS 47 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 47 (243)
..+|+|.|+ |.+|...++.+...|++|+++++ ++.+.+...
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~-~~~~~~~a~ 68 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDI-DDAKLELAR 68 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH
T ss_pred CCEEEEeec-cccHHHHHHHHHHcCCccceecc-hhhHHHhhh
Confidence 568999885 99999999999889999999998 664444433
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0014 Score=45.70 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=49.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|++.|+| .|.+|+.+++.|...|.+|.+..+ ++... ++. ..|-.....+++++...|++|
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~-dp~~a-----l~A-----------~~dG~~v~~~~~a~~~adivv 84 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEI-DPINA-----LQA-----------AMEGYEVTTMDEACQEGNIFV 84 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHH-----HHH-----------HHTTCEECCHHHHTTTCSEEE
T ss_pred cCCEEEEec-cccccHHHHHHHHhCCCeeEeeec-ccchh-----HHh-----------hcCceEeeehhhhhhhccEEE
Confidence 578999999 999999999999999999999988 55322 111 013333345677888889888
Q ss_pred Eeeec
Q 026091 84 HVAAP 88 (243)
Q Consensus 84 ~~a~~ 88 (243)
-+.|-
T Consensus 85 taTGn 89 (163)
T d1li4a1 85 TTTGC 89 (163)
T ss_dssp ECSSC
T ss_pred ecCCC
Confidence 77664
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.77 E-value=0.0019 Score=45.90 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=32.5
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhch
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRD 45 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (243)
|||-|+| .|.+|+++++.|++.||+|.+.+| +++....
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr-~~~~~~~ 39 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR-TYSKSEE 39 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SHHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEEC-CHHHHHH
Confidence 4799999 999999999999999999999999 5544433
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.76 E-value=0.0017 Score=46.05 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=49.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC---hhhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN---PESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~-- 77 (243)
...+|+|.|+ |.+|...++.+...|+ +|+++++ ++.+.+....+. ..+.+ |.++ .+.+.++.+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~-~~~r~~~a~~lG-------a~~~i--~~~~~~~~~~v~~~t~g~ 95 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGS-RPICVEAAKFYG-------ATDIL--NYKNGHIEDQVMKLTNGK 95 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECC-CHHHHHHHHHHT-------CSEEE--CGGGSCHHHHHHHHTTTS
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhcccccccccccc-hhhhHHHHHhhC-------ccccc--cccchhHHHHHHHHhhcc
Confidence 3568999985 9999999999988896 6888888 554444443332 12333 3333 344555553
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|+||.+++.
T Consensus 96 G~D~vid~~g~ 106 (174)
T d1jqba2 96 GVDRVIMAGGG 106 (174)
T ss_dssp CEEEEEECSSC
T ss_pred CcceEEEccCC
Confidence 48999999764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.73 E-value=0.0014 Score=39.79 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=29.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
||+|.|.| +|.+|+-++.+-.+.|++|.+++-
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp 32 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGL 32 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECT
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcC
Confidence 57999999 799999999999999999999987
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.00096 Score=48.26 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=32.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
+-|+|.|+| +|.+|+.++..++..|++|++.++ +++
T Consensus 3 ~IkkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~-~~~ 38 (192)
T d1f0ya2 3 IVKHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQ-TED 38 (192)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred eeEEEEEEC-cCHHHHHHHHHHHhCCCcEEEEEC-ChH
Confidence 358999999 599999999999999999999999 543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.67 E-value=0.0014 Score=43.61 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+++++|+| .|+||..++..|.+.|.+|+++.|+
T Consensus 19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 467999999 6999999999999999999999873
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.65 E-value=0.0027 Score=44.85 Aligned_cols=75 Identities=13% Similarity=0.089 Sum_probs=45.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh-----c
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI-----A 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~ 77 (243)
...+|+|.|+ |.+|...++.+...|.. |+++++ ++...+..+.+.. .+.+..+ .+.+.+.+.+ .
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~-~~~k~~~ak~lGa-------~~~i~~~-~~~~~~~~~~~~~~~~ 97 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI-NKDKFARAKEFGA-------TECINPQ-DFSKPIQEVLIEMTDG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-CGGGHHHHHHHTC-------SEEECGG-GCSSCHHHHHHHHTTS
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcc-cHHHHHHHHHhCC-------cEEEeCC-chhhHHHHHHHHHcCC
Confidence 3468999997 67899999999888965 555555 6655544444322 1333221 1122222222 3
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|+||.+.|.
T Consensus 98 g~D~vid~~G~ 108 (176)
T d2fzwa2 98 GVDYSFECIGN 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEeeecCCC
Confidence 68999998763
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.0016 Score=42.83 Aligned_cols=34 Identities=26% Similarity=0.190 Sum_probs=31.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+|+|+|.| .|++|..++..|.+.|.+|+++.|.
T Consensus 20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~ 53 (116)
T d1gesa2 20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMF 53 (116)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeec
Confidence 368999999 6999999999999999999999984
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.62 E-value=0.0016 Score=43.22 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
.++|+|.| .|++|..++..|.++|.+|+++.|++
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence 57999999 69999999999999999999999943
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.55 E-value=0.0024 Score=42.81 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=48.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----ccc
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----GCT 80 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d 80 (243)
+||.|.|++|-.|+.+.+.+.+.|+++.+..-.+... .+ . ... +..|.+.++.+.+.++ +..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~---~-----~~D---VvIDFS~p~~~~~~l~~~~~~~~p 67 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--EL---D-----SPD---VVIDFSSPEALPKTVDLCKKYRAG 67 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--EC---S-----CCS---EEEECSCGGGHHHHHHHHHHHTCE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hh---c-----cCC---EEEEecCHHHHHHHHHHHHhcCCC
Confidence 3799999999999999999989999877654312211 11 0 112 4669999998888876 457
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
.|+-+.|
T Consensus 68 ~ViGTTG 74 (128)
T d1vm6a3 68 LVLGTTA 74 (128)
T ss_dssp EEECCCS
T ss_pred EEEEcCC
Confidence 7775443
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.54 E-value=0.002 Score=42.91 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=30.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
+.|+|+|.| .|++|..++..|.+.|.+|+++.|.
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~ 62 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDIL 62 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEec
Confidence 457999999 6999999999999999999999884
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.53 E-value=0.012 Score=38.48 Aligned_cols=32 Identities=19% Similarity=0.428 Sum_probs=28.3
Q ss_pred CeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEe
Q 026091 6 GRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|+|.|+|++ +..|..+.+.|++.||+|+.+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP 36 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP 36 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence 689999988 77999999999999999887754
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.48 E-value=0.0034 Score=44.15 Aligned_cols=80 Identities=14% Similarity=0.067 Sum_probs=52.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC--CChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL--NNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~~~d~ 81 (243)
.+|++.|+|-+.-+|+.++..|+++|..|+.+.++......... ... -......|+ -..+.+.+...++|+
T Consensus 28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~lk~~~~~aDI 100 (171)
T d1edza1 28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE---SLK----LNKHHVEDLGEYSEDLLKKCSLDSDV 100 (171)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC---CSS----CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccc---cee----eeeeccccccccchhHHhhccccCCE
Confidence 57999999999999999999999999999877663221110100 000 001111222 245668888888999
Q ss_pred EEEeeeccC
Q 026091 82 VIHVAAPID 90 (243)
Q Consensus 82 vi~~a~~~~ 90 (243)
||..+|..+
T Consensus 101 vIsavG~p~ 109 (171)
T d1edza1 101 VITGVPSEN 109 (171)
T ss_dssp EEECCCCTT
T ss_pred EEEccCCCc
Confidence 998877644
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.0035 Score=43.75 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=45.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|+|+|-+.-+|+.++..|.++|++|+.+..+.. .+.+..++.|+||
T Consensus 36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~------------------------------~l~~~~~~ADivI 85 (166)
T d1b0aa1 36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK------------------------------NLRHHVENADLLI 85 (166)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS------------------------------CHHHHHHHCSEEE
T ss_pred ccceEEEEeccccccHHHHHHHHHhhccccccccccc------------------------------hhHHHHhhhhHhh
Confidence 5799999999999999999999999999987755221 2345556789999
Q ss_pred EeeeccCC
Q 026091 84 HVAAPIDI 91 (243)
Q Consensus 84 ~~a~~~~~ 91 (243)
.++|..+.
T Consensus 86 ~a~G~p~~ 93 (166)
T d1b0aa1 86 VAVGKPGF 93 (166)
T ss_dssp ECSCCTTC
T ss_pred hhccCccc
Confidence 88886544
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0024 Score=42.60 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
+|+++|.| .|++|..++..|.+.|.+|+++.|+
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~ 54 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRH 54 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeec
Confidence 58999999 6999999999999999999999994
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.44 E-value=0.0044 Score=43.77 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=45.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEE-ecCCCC-hhhHHHHh--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF-NADLNN-PESFDAAI--AGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d-~~~~~~~~--~~~ 79 (243)
..+|+|.|+ |.+|...+..+...| .+|+++++ ++.+.+....+. ..+.+ ..|-.+ .+...+.. .++
T Consensus 29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~-~~~k~~~a~~~G-------a~~~i~~~~~~~~~~~~~~~~~~~G~ 99 (176)
T d2jhfa2 29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDI-NKDKFAKAKEVG-------ATECVNPQDYKKPIQEVLTEMSNGGV 99 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHTT-------CSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecC-cHHHHHHHHHhC-------CeeEEecCCchhHHHHHHHHHhcCCC
Confidence 468999998 668999999888888 57888888 654443333221 11222 223222 22222232 268
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|++|.+.|.
T Consensus 100 D~vid~~G~ 108 (176)
T d2jhfa2 100 DFSFEVIGR 108 (176)
T ss_dssp SEEEECSCC
T ss_pred CEEEecCCc
Confidence 999988664
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.43 E-value=0.0067 Score=42.62 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=46.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc--cccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA--GCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~ 81 (243)
..+|+|.| +|.+|...++.+...|. .|+++++ ++.+.+..+.+ ...+.+..+=.+.+.+.+... ++|+
T Consensus 33 g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~-~~~k~~~~~~~-------ga~~~i~~~~~~~~~~~~~~~~~g~d~ 103 (172)
T d1h2ba2 33 GAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDV-KEEKLKLAERL-------GADHVVDARRDPVKQVMELTRGRGVNV 103 (172)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEES-SHHHHHHHHHT-------TCSEEEETTSCHHHHHHHHTTTCCEEE
T ss_pred CCEEEEeC-CChHHHHHHHHHHhhcCcccccccc-hhHHHHHHhhc-------ccceeecCcccHHHHHHHhhCCCCceE
Confidence 46899988 59999999998888885 5555566 65444333322 123444433222334444433 5899
Q ss_pred EEEeeec
Q 026091 82 VIHVAAP 88 (243)
Q Consensus 82 vi~~a~~ 88 (243)
||.+++.
T Consensus 104 vid~~g~ 110 (172)
T d1h2ba2 104 AMDFVGS 110 (172)
T ss_dssp EEESSCC
T ss_pred EEEecCc
Confidence 9988763
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.43 E-value=0.0058 Score=43.28 Aligned_cols=77 Identities=21% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-------------------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD------------------- 65 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D------------------- 65 (243)
+-+|+|+| .|-.|..-++.....|..|.++++ ++...++++.+.. +++..+
T Consensus 29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~-~~~~~~~l~~l~~--------~~i~~~~~~~~~~~~~~gyA~~~s~ 98 (183)
T d1l7da1 29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDV-RAATKEQVESLGG--------KFITVDDEAMKTAETAGGYAKEMGE 98 (183)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHTTC--------EECCC--------------------
T ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhhc--------ceEEEeccccccccccccchhhcCH
Confidence 45899999 699999999999999999999999 6655555554321 222111
Q ss_pred -C--CChhhHHHHhccccEEEEeeeccCC
Q 026091 66 -L--NNPESFDAAIAGCTGVIHVAAPIDI 91 (243)
Q Consensus 66 -~--~d~~~~~~~~~~~d~vi~~a~~~~~ 91 (243)
. ...+.+.+.++++|.||-++-....
T Consensus 99 ~~~~~~~~~l~~~l~~aDlVI~talipG~ 127 (183)
T d1l7da1 99 EFRKKQAEAVLKELVKTDIAITTALIPGK 127 (183)
T ss_dssp ---CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence 1 2235677778899999988866544
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.40 E-value=0.0025 Score=44.95 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=27.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDP 40 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 40 (243)
+.||.|.| +|++|+.+++.|.+. +.+++++..++.
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~ 38 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRA 38 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSS
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence 45899999 799999999999775 577777765343
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.40 E-value=0.002 Score=42.54 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=31.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++++|+|.| .|++|-.++..|.+.|.+|+++.|.
T Consensus 21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~ 54 (117)
T d1onfa2 21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARG 54 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEEC-CchHHHHHHHHHHhccccceeeehh
Confidence 368999999 6999999999999999999999983
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.40 E-value=0.0067 Score=42.32 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=26.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-CCeEEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTV 36 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~ 36 (243)
..||.|.|++|-+|+.+++.+.+. +.++.+..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 468999999999999999988876 56765554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.37 E-value=0.0058 Score=42.60 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=46.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCC-CC-hhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADL-NN-PESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d-~~~~~~~~~~~d~ 81 (243)
...+|+|.| +|.+|...++.+...|++|+++++ ++...+..+.+ +...+...- .| .+.+.+..++.+.
T Consensus 27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~-~~~r~~~~k~~--------Ga~~~~~~~~~~~~~~~~~~~~~~~~ 96 (168)
T d1rjwa2 27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDI-GDEKLELAKEL--------GADLVVNPLKEDAAKFMKEKVGGVHA 96 (168)
T ss_dssp TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHT--------TCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEee-cccchhhhhHHHhcCCCeEeccCC-CHHHhhhhhhc--------CcceecccccchhhhhcccccCCCce
Confidence 346899987 599999999999989999999988 66444333322 222222221 12 2445555566666
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
+|-++
T Consensus 97 ~v~~~ 101 (168)
T d1rjwa2 97 AVVTA 101 (168)
T ss_dssp EEESS
T ss_pred EEeec
Confidence 66554
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.34 E-value=0.0084 Score=43.13 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=47.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhc--
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIA-- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~-- 77 (243)
...+|+|.| +|.+|...++.+...|. .|+++++ ++...+....+ +...+. |-.+. +.+.++.+
T Consensus 25 ~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~-~~~rl~~a~~~--------Ga~~~~-~~~~~~~~~~i~~~t~g~ 93 (195)
T d1kola2 25 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDL-NPARLAHAKAQ--------GFEIAD-LSLDTPLHEQIAALLGEP 93 (195)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHT--------TCEEEE-TTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecc-cchhhHhhhhc--------cccEEE-eCCCcCHHHHHHHHhCCC
Confidence 356899998 59999998888877776 6777777 66444433322 333332 33333 34455544
Q ss_pred cccEEEEeeec
Q 026091 78 GCTGVIHVAAP 88 (243)
Q Consensus 78 ~~d~vi~~a~~ 88 (243)
++|.+|.+.|.
T Consensus 94 g~D~vid~vG~ 104 (195)
T d1kola2 94 EVDCAVDAVGF 104 (195)
T ss_dssp CEEEEEECCCT
T ss_pred CcEEEEECccc
Confidence 58999999874
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.33 E-value=0.0021 Score=42.17 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=31.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+++++|.| .|++|..++..|.+.|++|+++.|.
T Consensus 20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~ 53 (115)
T d1lvla2 20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEAR 53 (115)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeee
Confidence 468999999 6999999999999999999999883
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.29 E-value=0.0022 Score=49.93 Aligned_cols=35 Identities=23% Similarity=0.443 Sum_probs=31.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
++|+|+|+| +|.-|..++..|.++|++|.++-+++
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 368999999 79999999999999999999998743
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.25 E-value=0.011 Score=45.08 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=30.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.|+|+|-| .|.+|+++++.|.+.|++|++++-
T Consensus 35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence 568999999 799999999999999999999876
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.25 E-value=0.0021 Score=44.39 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=29.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchh
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQ 42 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~ 42 (243)
+||.++| +|.+|+++++.|++.| ++|.+.+| +++.
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r-~~~~ 36 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANR-GAEK 36 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECS-SHHH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeC-ChhH
Confidence 3799999 6999999999998887 99999999 5543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.24 E-value=0.003 Score=45.32 Aligned_cols=63 Identities=13% Similarity=0.033 Sum_probs=45.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|.|.| .|.||+.+++.|..-|.+|.+.++...... ... .....+.++++.+|+|+
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------------~~~-------~~~~~l~ell~~sDii~ 101 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-------------GNA-------TQVQHLSDLLNMSDVVS 101 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-------------TTC-------EECSCHHHHHHHCSEEE
T ss_pred cceEEEEee-cccchhhhhhhcccccceEeeccccccchh-------------hhh-------hhhhhHHHHHhhcccee
Confidence 467999998 899999999999999999999987332111 011 11136778888899887
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
.+..
T Consensus 102 i~~p 105 (188)
T d1sc6a1 102 LHVP 105 (188)
T ss_dssp ECCC
T ss_pred eccc
Confidence 6654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.24 E-value=0.0027 Score=42.24 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=31.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+++++|+| .|++|..++..|.+.|.+|+++.|+
T Consensus 24 ~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~ 57 (123)
T d1dxla2 24 IPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFA 57 (123)
T ss_dssp CCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred cCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEc
Confidence 468999999 6999999999999999999999983
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0068 Score=42.52 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=31.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
.+|+|.|+|.+.-+|+.++..|+++|++|+.+..
T Consensus 38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~ 71 (170)
T d1a4ia1 38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS 71 (170)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred ccceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence 5799999999999999999999999999988766
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.21 E-value=0.0033 Score=45.57 Aligned_cols=62 Identities=18% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+|.|.| .|.||+.+++.|..-|.+|++.+++..... ...+ +..++.++++.+|+|+
T Consensus 44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~------------~~~~--------~~~~l~~l~~~~D~v~ 102 (199)
T d1dxya1 44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD------------HPDF--------DYVSLEDLFKQSDVID 102 (199)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC------------CTTC--------EECCHHHHHHHCSEEE
T ss_pred cceeeeeee-cccccccccccccccceeeeccCCccchhh------------hcch--------hHHHHHHHHHhcccce
Confidence 458999999 899999999999999999999888332110 0111 1235778888889876
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 103 ~~~ 105 (199)
T d1dxya1 103 LHV 105 (199)
T ss_dssp ECC
T ss_pred eee
Confidence 554
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.19 E-value=0.0042 Score=44.54 Aligned_cols=66 Identities=18% Similarity=0.092 Sum_probs=45.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..++|.|.| .|.||+.+++.|..-|.+|...+|...... .... ..+....++.++++++|+|+
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~~---------------~~~~~~~~l~~~l~~sD~v~ 105 (188)
T d2naca1 43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKE---------------LNLTWHATREDMYPVCDVVT 105 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHH---------------HTCEECSSHHHHGGGCSEEE
T ss_pred cccceeecc-ccccchhhhhhhhccCceEEEEeecccccc-cccc---------------ccccccCCHHHHHHhccchh
Confidence 467999999 899999999999988999999988432111 1110 01223356667778888775
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 106 ~~~ 108 (188)
T d2naca1 106 LNC 108 (188)
T ss_dssp ECS
T ss_pred hcc
Confidence 544
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.13 E-value=0.0037 Score=42.14 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=31.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
..++|+|+| +|++|..++..|.+.|.+|+++.+.
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~ 67 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTA 67 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeec
Confidence 358999999 7999999999999999999999983
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.13 E-value=0.0082 Score=42.43 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=49.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEe-cCCCC-hhhHHHHh--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFN-ADLNN-PESFDAAI--AGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~d-~~~~~~~~--~~~ 79 (243)
..+|+|+| +|.+|...++.+...| .+|+++++ ++++.+....+.. .+.+. -|-.+ .+.+.+.. .++
T Consensus 30 g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~-~~~kl~~Ak~~GA-------~~~in~~~~~~~~~~~~~~~~g~G~ 100 (176)
T d1d1ta2 30 GSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDL-NKDKFEKAMAVGA-------TECISPKDSTKPISEVLSEMTGNNV 100 (176)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHHTC-------SEEECGGGCSSCHHHHHHHHHTSCC
T ss_pred CCEEEEEC-CCchhHHHHHHHHHcCCceEEEecC-cHHHHHHHHhcCC-------cEEECccccchHHHHHHHHhccccc
Confidence 46899998 5999999999999999 57999999 6655555554422 23332 22222 23334433 369
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|++|.+.+.
T Consensus 101 d~vi~~~g~ 109 (176)
T d1d1ta2 101 GYTFEVIGH 109 (176)
T ss_dssp CEEEECSCC
T ss_pred eEEEEeCCc
Confidence 999988654
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.09 E-value=0.023 Score=38.36 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.0
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.|+|.|+||+ +..|..+++.|.+.||+|+.+.-
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP 54 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP 54 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC
Confidence 36899999998 78999999999999999887765
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.05 E-value=0.0046 Score=44.18 Aligned_cols=64 Identities=19% Similarity=0.088 Sum_probs=44.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|++.|.| .|.||+.+++.+..-|.+|.+.++.......... .++ ..++.++++++|+|+
T Consensus 43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~----------~~~--------~~~l~ell~~sDiv~ 103 (184)
T d1ygya1 43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL----------GIE--------LLSLDDLLARADFIS 103 (184)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH----------TCE--------ECCHHHHHHHCSEEE
T ss_pred cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc----------Cce--------eccHHHHHhhCCEEE
Confidence 467899998 8999999999998889999988873322111100 111 235678888899876
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 104 ~~~ 106 (184)
T d1ygya1 104 VHL 106 (184)
T ss_dssp ECC
T ss_pred EcC
Confidence 554
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.04 E-value=0.0036 Score=41.48 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=30.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.++++|.| .|++|..++..|.+.|.+|+++.|+
T Consensus 32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~ 64 (122)
T d1xhca2 32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRG 64 (122)
T ss_dssp HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecc
Confidence 37899999 6999999999999999999999883
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=96.04 E-value=0.0045 Score=41.22 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+++++|.| .|+||..++..|.+.|.+|+++.|+
T Consensus 25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~ 58 (125)
T d1ojta2 25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMM 58 (125)
T ss_dssp CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEee
Confidence 468999999 6999999999999999999999883
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.92 E-value=0.02 Score=40.15 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=47.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHh--cc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAI--AG 78 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~ 78 (243)
...+|+|.| +|.+|...++.+...|. +|+++++ ++++.+..+.+. ....+...-.| .+...+.. .+
T Consensus 27 ~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~-~~~kl~~a~~lG-------a~~~i~~~~~d~~~~~~~~~~~~~G 97 (174)
T d1p0fa2 27 PGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGT-HKDKFPKAIELG-------ATECLNPKDYDKPIYEVICEKTNGG 97 (174)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS-CGGGHHHHHHTT-------CSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCC-hHHHHHHHHHcC-------CcEEEcCCCchhHHHHHHHHhcCCC
Confidence 346899999 59999999999988885 6888878 665444444332 12333222122 12222222 26
Q ss_pred ccEEEEeeec
Q 026091 79 CTGVIHVAAP 88 (243)
Q Consensus 79 ~d~vi~~a~~ 88 (243)
+|++|-+.+.
T Consensus 98 ~d~vid~~g~ 107 (174)
T d1p0fa2 98 VDYAVECAGR 107 (174)
T ss_dssp BSEEEECSCC
T ss_pred CcEEEEcCCC
Confidence 8999988653
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.91 E-value=0.0023 Score=46.41 Aligned_cols=37 Identities=24% Similarity=0.228 Sum_probs=32.4
Q ss_pred CCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 3 EEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 3 ~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
.+.|+|+|-| .|.+|+++++.|.+.|.+|++.+. +..
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~-d~~ 61 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADT-DTE 61 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc-hHH
Confidence 3678999999 899999999999999999998877 543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=95.88 E-value=0.023 Score=42.22 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=30.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.++|+|-| .|.+|+++++.|.+.|.+|++++-
T Consensus 30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence 578999999 899999999999999999998875
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.85 E-value=0.0067 Score=44.80 Aligned_cols=33 Identities=27% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.|+|+|-| .|.+|+++++.|.+.|.+|++.+.
T Consensus 38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~ 70 (230)
T d1leha1 38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDV 70 (230)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecc
Confidence 578999999 899999999999999999998877
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.84 E-value=0.015 Score=40.89 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=46.6
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCC--hhhHHHHh--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNN--PESFDAAI--AGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~~ 79 (243)
..+|+|+| +|.+|...++.+...|. .|++.++ ++.+.+..+.+. ..+.+...-.| .....+.. .++
T Consensus 29 G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~-~~~r~~~a~~~G-------a~~~i~~~~~~~~~~~~~~~~~~~G~ 99 (174)
T d1e3ia2 29 GSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDI-NGEKFPKAKALG-------ATDCLNPRELDKPVQDVITELTAGGV 99 (174)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHTT-------CSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCEEEEEC-CChHHHHHHHHHHHhCCceeeeecc-chHHHHHHHHhC-------CCcccCCccchhhhhhhHhhhhcCCC
Confidence 46899998 69999999999999997 5666666 654444443331 12333322222 22233222 369
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|++|.++|.
T Consensus 100 d~vie~~G~ 108 (174)
T d1e3ia2 100 DYSLDCAGT 108 (174)
T ss_dssp SEEEESSCC
T ss_pred cEEEEeccc
Confidence 999999764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.80 E-value=0.0064 Score=43.18 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=31.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|+|+|+| +|..|...+..|.++||+|+++.++
T Consensus 42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~ 75 (179)
T d1ps9a3 42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAH 75 (179)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEecc
Confidence 468999999 6999999999999999999999984
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.78 E-value=0.0081 Score=43.09 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|++.|.| .|.||+.+++.|..-|.+|.+.++.......... ......+++.++++++|+|+
T Consensus 46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~----------------~~~~~~~~l~~ll~~sD~v~ 108 (191)
T d1gdha1 46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS----------------YQATFHDSLDSLLSVSQFFS 108 (191)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH----------------HTCEECSSHHHHHHHCSEEE
T ss_pred cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc----------------ccccccCCHHHHHhhCCeEE
Confidence 368999999 8999999999999899999988873332111110 01112246778888889876
Q ss_pred Eee
Q 026091 84 HVA 86 (243)
Q Consensus 84 ~~a 86 (243)
.+.
T Consensus 109 l~~ 111 (191)
T d1gdha1 109 LNA 111 (191)
T ss_dssp ECC
T ss_pred ecC
Confidence 554
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.77 E-value=0.081 Score=39.08 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=27.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (243)
.++|+|.| .|.+|++++..|+..|- ++++++-
T Consensus 30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~ 62 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF 62 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence 47999999 79999999999999995 6777765
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.76 E-value=0.0052 Score=42.22 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=30.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.|+|+|+|| |.+|..-++.|++.|.+|++++-
T Consensus 12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 5799999995 99999999999999999999975
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.72 E-value=0.0056 Score=43.62 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=30.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 39 (243)
.+|||+|+| .|..|...+..|.++|+ +|+++.|++
T Consensus 3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 468999999 69999999999999998 599988843
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.71 E-value=0.019 Score=38.57 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=45.2
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhc-----ccc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIA-----GCT 80 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d 80 (243)
||.|+|++|-+|+.+++.+.+. ++++.+..-+.. .. ..+... + .=+..|.+.++.+.+.++ ++.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~---~~~~~~-----~-~DvvIDFS~p~~~~~~~~~~~~~~~~ 70 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PL---SLLTDG-----N-TEVVIDFTHPDVVMGNLEFLIDNGIH 70 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CT---HHHHTT-----T-CSEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-ch---hhhccc-----c-CCEEEEcccHHHHHHHHHHHHhcCCC
Confidence 6999999999999999987665 577665543122 11 111110 1 115679999987777765 467
Q ss_pred EEEEeee
Q 026091 81 GVIHVAA 87 (243)
Q Consensus 81 ~vi~~a~ 87 (243)
.|+-+.|
T Consensus 71 ~ViGTTG 77 (135)
T d1yl7a1 71 AVVGTTG 77 (135)
T ss_dssp EEECCCC
T ss_pred EEEeccc
Confidence 7774433
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.71 E-value=0.0073 Score=39.69 Aligned_cols=33 Identities=18% Similarity=0.035 Sum_probs=30.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.|+|+|.| +|++|..++..|.+.|.+|+++.|+
T Consensus 22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~ 54 (121)
T d1mo9a2 22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRT 54 (121)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcchhheEeecc
Confidence 57899999 7999999999999999999999984
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.52 E-value=0.0072 Score=41.52 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=28.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r 37 (243)
||+|.|.|+||.||...++-+.+. .++|.+++-
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa 35 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA 35 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 579999999999999998877665 478988876
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.49 E-value=0.0062 Score=45.87 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=28.8
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
|+|+| .|..|..++.+|+++|++|+++.+..
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 99999 69999999999999999999999854
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=95.39 E-value=0.024 Score=38.78 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=28.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc--CCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r 37 (243)
+||+|.|.|+||.||...++-+.+. .++|.+++-
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa 36 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA 36 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence 3789999999999999988877664 488998876
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.36 E-value=0.0063 Score=43.75 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=27.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCch
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPE 41 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (243)
|||.|.| .|++|..++..| ++|++|++++. ++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Di-n~~ 33 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDI-LPS 33 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECS-CHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEEC-CHH
Confidence 4799998 899999998755 57999999998 553
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.28 E-value=0.0082 Score=46.17 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=31.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|+|+|+| +|..|...+.+|.++|++|.++-++
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~ 62 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS 62 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 568999999 7999999999999999999999873
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.25 E-value=0.0086 Score=45.35 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=30.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.|||+|+| +|.-|...+.+|.+.|++|.++-++
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 37999999 6999999999999999999999873
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.08 E-value=0.0066 Score=43.03 Aligned_cols=83 Identities=11% Similarity=0.171 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCC--CCCCCeEE-EecCCCChhhHHHHhcccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLP--RASERLQI-FNADLNNPESFDAAIAGCT 80 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~-~~~D~~d~~~~~~~~~~~d 80 (243)
|-||.|-| .|.||+.++|.|.+++ .+|+++....+............. ...+.... -...+.-...+..+..++|
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 34899999 8999999999999875 688887653332211111000000 00011111 1112222345666677899
Q ss_pred EEEEeeec
Q 026091 81 GVIHVAAP 88 (243)
Q Consensus 81 ~vi~~a~~ 88 (243)
+||-|.|.
T Consensus 80 iViecTG~ 87 (178)
T d1b7go1 80 IVVDTTPN 87 (178)
T ss_dssp EEEECCST
T ss_pred EEEECCCC
Confidence 99999765
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.02 E-value=0.013 Score=43.52 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=30.4
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.+||+|+| .|..|..++..|.++|++|+++-|+
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~ 36 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERS 36 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 57999999 6999999999999999999999883
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.97 E-value=0.035 Score=44.84 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=49.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCCchhhchhhh--h---hcC--------------CCCCCCeEEEec
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSDPEQKRDLSF--L---TNL--------------PRASERLQIFNA 64 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~---~~~--------------~~~~~~~~~~~~ 64 (243)
..||||+| .|.+|+++++.|+..|. ++++++.+. -....+.+ + .+. ....-+++.+..
T Consensus 37 ~~kVlvvG-~GglG~ei~k~L~~~Gvg~i~lvD~D~-Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 114 (426)
T d1yovb1 37 TCKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDT-IDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 114 (426)
T ss_dssp HCCEEEEC-SSTTHHHHHHHHHTTTCCCEEEECCCB-CCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred cCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEECCC-cchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence 46899999 58899999999999995 788887632 11111111 0 001 012345666666
Q ss_pred CCCChhhHHHHhccccEEEEe
Q 026091 65 DLNNPESFDAAIAGCTGVIHV 85 (243)
Q Consensus 65 D~~d~~~~~~~~~~~d~vi~~ 85 (243)
++.+.. .++++++|+||.+
T Consensus 115 ~i~~~~--~~~~~~~DlVi~~ 133 (426)
T d1yovb1 115 KIQDFN--DTFYRQFHIIVCG 133 (426)
T ss_dssp CGGGBC--HHHHTTCSEEEEC
T ss_pred cccchH--HHHHHhcchheec
Confidence 666543 4678899999966
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.93 E-value=0.028 Score=38.79 Aligned_cols=69 Identities=19% Similarity=0.184 Sum_probs=49.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..|+++|.| =|.+|+-++++|...|.+|++.-+ +|-.. ++.. .++.+ ...++++++..|++|
T Consensus 22 aGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~-DPi~a-----lqA~---mdGf~--------v~~~~~a~~~aDi~v 83 (163)
T d1v8ba1 22 SGKIVVICG-YGDVGKGCASSMKGLGARVYITEI-DPICA-----IQAV---MEGFN--------VVTLDEIVDKGDFFI 83 (163)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CHHHH-----HHHH---TTTCE--------ECCHHHHTTTCSEEE
T ss_pred cCCEEEEec-ccccchhHHHHHHhCCCEEEEEec-Cchhh-----HHHH---hcCCc--------cCchhHccccCcEEE
Confidence 468999999 899999999999999999998888 55222 1111 12333 334567888888888
Q ss_pred EeeeccC
Q 026091 84 HVAAPID 90 (243)
Q Consensus 84 ~~a~~~~ 90 (243)
-+.|-.+
T Consensus 84 TaTGn~~ 90 (163)
T d1v8ba1 84 TCTGNVD 90 (163)
T ss_dssp ECCSSSS
T ss_pred EcCCCCc
Confidence 7766433
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.80 E-value=0.02 Score=42.07 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=31.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
..|+|+|+| +|..|...+..|.++|++|+++.+++
T Consensus 48 ~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 48 NKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence 458999999 69999999999999999999998743
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.80 E-value=0.0072 Score=42.55 Aligned_cols=77 Identities=18% Similarity=0.175 Sum_probs=43.8
Q ss_pred CCeEEEecCchhhHHH--HHHHHHHc----CCeEEEEEeCCchhhchhh-hhhc-CCCCCCCeEEEecCCCChhhHHHHh
Q 026091 5 KGRVCVTGGTGFIGSW--LIMRLLDH----GYSVRTTVRSDPEQKRDLS-FLTN-LPRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
.+||.|+|| |.+|.. ++..|+.. +.++..+++ +++..+... .+.. ........++. ...+..+.+
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~~eaL 74 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDI-DEERLDAILTIAKKYVEEVGADLKFE-----KTMNLDDVI 74 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECS-CHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCCeEEE-----EeCChhhcc
Confidence 358999995 989875 34445433 358999999 544322111 1111 00011222222 223566788
Q ss_pred ccccEEEEeeec
Q 026091 77 AGCTGVIHVAAP 88 (243)
Q Consensus 77 ~~~d~vi~~a~~ 88 (243)
+++|+|+++++.
T Consensus 75 ~dad~Vv~~~~~ 86 (171)
T d1obba1 75 IDADFVINTAMV 86 (171)
T ss_dssp TTCSEEEECCCT
T ss_pred cCCCeEeeeccc
Confidence 999999999865
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.79 E-value=0.017 Score=44.27 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=29.9
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.+||+|+| +|.-|...+..|.+.|++|.++=+
T Consensus 4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa 36 (449)
T d2dw4a2 4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEA 36 (449)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeC
Confidence 457899999 799999999999999999999865
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.78 E-value=0.053 Score=41.30 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=23.8
Q ss_pred CchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 13 GTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 13 atG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.||..|.+++++|+.+|++|+.+.+.
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecC
Confidence 37999999999999999999999883
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.72 E-value=0.054 Score=37.83 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=46.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEE---------ecCCCChhhHHH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIF---------NADLNNPESFDA 74 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~D~~d~~~~~~ 74 (243)
|++|.|-| .|-||+.+++.|.+++ .+|+++.-..+.... ..+... +.....- ...+.-...+..
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~--~~l~~~---~~~~~~~~~~~~~~~~~~~~~v~g~~~~ 74 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA--RMALKK---GYDLYVAIPERVKLFEKAGIEVAGTVDD 74 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHH--HHHHHT---TCCEEESSGGGHHHHHHTTCCCCEEHHH
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHH--HHHHhc---CCceEecccccceeecccCcccCCChhH
Confidence 57999998 8999999999998876 577776543332211 111110 0011110 011222235666
Q ss_pred HhccccEEEEeeec
Q 026091 75 AIAGCTGVIHVAAP 88 (243)
Q Consensus 75 ~~~~~d~vi~~a~~ 88 (243)
+++++|+||-|.|.
T Consensus 75 ~~~~vDvViEcTG~ 88 (171)
T d1cf2o1 75 MLDEADIVIDCTPE 88 (171)
T ss_dssp HHHTCSEEEECCST
T ss_pred hhcCCCEEEEccCC
Confidence 77889999999765
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.69 E-value=0.012 Score=41.42 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=47.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcC--CC---CCCCe-EEEecCCCChhhHHHHhc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNL--PR---ASERL-QIFNADLNNPESFDAAIA 77 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~--~~---~~~~~-~~~~~D~~d~~~~~~~~~ 77 (243)
+.||.|-| .|-||+.+++.|.++. .+|+++.-..+... ...+... .. ..+.+ .+-...+.....+..+.+
T Consensus 2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (172)
T d2czca2 2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFE--AYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE 78 (172)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHH--HHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHH--HHHhhhcCceeecccccceeeecccCccccchhhhhhc
Confidence 56999999 7999999999998765 67777754233221 1111111 00 00000 000111223346667778
Q ss_pred cccEEEEeeecc
Q 026091 78 GCTGVIHVAAPI 89 (243)
Q Consensus 78 ~~d~vi~~a~~~ 89 (243)
++|+||-|.|..
T Consensus 79 ~vDvViEcTG~f 90 (172)
T d2czca2 79 KVDIIVDATPGG 90 (172)
T ss_dssp TCSEEEECCSTT
T ss_pred cCCEEEECCCCC
Confidence 899999997753
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.66 E-value=0.013 Score=41.35 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK 43 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (243)
+.|+|+|.| +|+.+++++..|.+.| +|.++.| +.+..
T Consensus 17 ~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR-~~~ka 53 (177)
T d1nvta1 17 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANR-TVEKA 53 (177)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECS-SHHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehh-hhhHH
Confidence 578999999 6889999999997766 8999999 55433
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.58 E-value=0.027 Score=38.60 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=27.6
Q ss_pred CeEEEe-cCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 6 GRVCVT-GGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 6 k~ilvt-GatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
+.++|. .+.||+|..+++.|++.|++|+++.+.
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~ 73 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 73 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CceEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Confidence 455554 246999999999999999999999993
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.47 E-value=0.021 Score=44.39 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=31.1
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeCC
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRSD 39 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~~ 39 (243)
|. .+|+|+|+| +|.-|...+..|++.| ++|+++-|++
T Consensus 1 m~-~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 1 LP-TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CC-SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CC-CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 44 478999999 6999999999998876 6999998843
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.44 E-value=0.014 Score=44.82 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=29.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|..|+|+| +|.-|..+++.|++.|++|.++-++
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~ 33 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKR 33 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECC
Confidence 45799999 7999999999999999999999873
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.40 E-value=0.016 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.213 Sum_probs=28.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|+|+| +|.-|...+.+|.++|++|+++-++
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence 3699999 5999999999999999999999773
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=94.34 E-value=0.13 Score=37.75 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r 37 (243)
+.++|+|-| .|.+|+++++.|.+ .|..|++++-
T Consensus 30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence 578999998 99999999999975 5999998875
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.26 E-value=0.03 Score=40.36 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=45.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhh--chhhhhhcCCCCCCCeEEEe-cCCCChhhHHHHhc-cccE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQK--RDLSFLTNLPRASERLQIFN-ADLNNPESFDAAIA-GCTG 81 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~-~~d~ 81 (243)
|||++.| ++..|..++++|.+.|++|.++....+... .....+.... ...++.++. .++.+.+.++.+-+ ++|.
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a-~~~~i~~~~~~~~~~~~~~~~i~~~~~Dl 78 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLA-AERGIPVYAPDNVNHPLWVERIAQLSPDV 78 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHH-HHHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHH-HHcCCcceecccccchhhhhhhhhhcccc
Confidence 3677777 677899999999999999987764222110 0000010000 012455554 45666555444333 5788
Q ss_pred EEEeee
Q 026091 82 VIHVAA 87 (243)
Q Consensus 82 vi~~a~ 87 (243)
++....
T Consensus 79 ii~~g~ 84 (203)
T d2blna2 79 IFSFYY 84 (203)
T ss_dssp EEEESC
T ss_pred eeeeec
Confidence 876653
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.26 E-value=0.023 Score=39.45 Aligned_cols=33 Identities=18% Similarity=0.046 Sum_probs=28.5
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC--eEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY--SVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~--~V~~~~r~ 38 (243)
.|||+|+| .|++|..++..|.+.+. +|+++.++
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~ 36 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPN 36 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 58999999 69999999999999874 78888763
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=94.21 E-value=0.028 Score=42.00 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=30.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.++++|-| .|.+|+++++.|.+.|.+|++++-
T Consensus 35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 578999999 899999999999999999999876
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.18 E-value=0.019 Score=43.46 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=29.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
.+|+|+| .|..|..++..|.+.|++|.++-|+.
T Consensus 3 ~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 3 TQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3799999 59999999999999999999999843
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=94.11 E-value=0.055 Score=36.22 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=29.0
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.|+|.|+||| +-.|..+.+.|.+.|+++..+.-
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~ 48 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP 48 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence 46899999998 56899999999999999876654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.07 E-value=0.013 Score=41.07 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=43.1
Q ss_pred CCeEEEecCchhhHHH-HHHHHHHc-C----CeEEEEEeCCchhhchhh-hhhcC-CCCCCCeEEEecCCCChhhHHHHh
Q 026091 5 KGRVCVTGGTGFIGSW-LIMRLLDH-G----YSVRTTVRSDPEQKRDLS-FLTNL-PRASERLQIFNADLNNPESFDAAI 76 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-l~~~L~~~-g----~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~ 76 (243)
.-||.|+|| |.+|.. ++..|+.. . .++.+++. +++...... .+... .......+... ..+..+.+
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal 75 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDN-DKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAF 75 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECS-CHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHH
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcC-ChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhcc
Confidence 347999997 556654 44455443 1 37888888 554332111 11110 00111222222 12566788
Q ss_pred ccccEEEEeeeccC
Q 026091 77 AGCTGVIHVAAPID 90 (243)
Q Consensus 77 ~~~d~vi~~a~~~~ 90 (243)
+++|+||.+++...
T Consensus 76 ~~AD~Vvitag~~~ 89 (167)
T d1u8xx1 76 TDVDFVMAHIRVGK 89 (167)
T ss_dssp SSCSEEEECCCTTH
T ss_pred CCCCEEEECCCcCC
Confidence 99999999998744
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.97 E-value=0.1 Score=36.16 Aligned_cols=75 Identities=12% Similarity=0.144 Sum_probs=44.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-CCC-hhhHHHHh--ccc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-LNN-PESFDAAI--AGC 79 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~d-~~~~~~~~--~~~ 79 (243)
..+|+|.|+ |.+|...+..+...| .+|+++++ +++..+....+. ..+.+..+ -.+ .+...+.. .++
T Consensus 29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~-~~~rl~~a~~~G-------Ad~~in~~~~~~~~~~~~~~~~~~G~ 99 (175)
T d1cdoa2 29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDL-NPDKFEKAKVFG-------ATDFVNPNDHSEPISQVLSKMTNGGV 99 (175)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHTT-------CCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCEEEEEec-CCccchHHHHHHHHhhchheeecc-hHHHHHHHHHcC-------CcEEEcCCCcchhHHHHHHhhccCCc
Confidence 468999995 667777777777776 46777777 665444444332 22444322 111 23333333 368
Q ss_pred cEEEEeeec
Q 026091 80 TGVIHVAAP 88 (243)
Q Consensus 80 d~vi~~a~~ 88 (243)
|+++.+.|.
T Consensus 100 d~vid~~G~ 108 (175)
T d1cdoa2 100 DFSLECVGN 108 (175)
T ss_dssp SEEEECSCC
T ss_pred ceeeeecCC
Confidence 999988764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.88 E-value=0.019 Score=39.66 Aligned_cols=34 Identities=32% Similarity=0.406 Sum_probs=23.3
Q ss_pred CCCCCCeEEEecCchhhHHHH-HHHHHHc-CCeEEEEE
Q 026091 1 MEEEKGRVCVTGGTGFIGSWL-IMRLLDH-GYSVRTTV 36 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l-~~~L~~~-g~~V~~~~ 36 (243)
|+ ++.||.|+| +|.+|+.+ .+.|.+. ..++.++.
T Consensus 1 M~-kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~ava 36 (157)
T d1nvmb1 1 MN-QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMV 36 (157)
T ss_dssp CC-SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred CC-CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEE
Confidence 55 345899999 99999865 4555433 35777764
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.87 E-value=0.034 Score=38.79 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=29.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
..++|+|+| .|++|-.++..|.+.|.+|.++.+.
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence 357899999 7999999999999999887777663
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.80 E-value=0.13 Score=33.79 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=48.7
Q ss_pred CCCeEEEecC----------chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGG----------TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
..|+|+|.|+ --|.+.+.+++|.+.|++++.+.- ++........+ ...+...--..+.+.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~-NP~TVstd~d~---------aD~lYfePlt~e~v~ 75 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNS-NPATIMTDPEM---------ADATYIEPIHWEVVR 75 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECS-CTTCGGGCGGG---------SSEEECSCCCHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecC-chHhhhcChhh---------cceeeeecCCHHHHH
Confidence 3589999997 447899999999999999988877 55433221111 112233444567777
Q ss_pred HHhc--cccEEEEee
Q 026091 74 AAIA--GCTGVIHVA 86 (243)
Q Consensus 74 ~~~~--~~d~vi~~a 86 (243)
++++ ++|.|+-..
T Consensus 76 ~Ii~~E~pd~il~~~ 90 (127)
T d1a9xa3 76 KIIEKERPDAVLPTM 90 (127)
T ss_dssp HHHHHHCCSEEECSS
T ss_pred HHHHHhCcCCeEEEe
Confidence 7775 689987543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.78 E-value=0.027 Score=37.32 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=57.0
Q ss_pred CeEEEecCchhhHHHHHHHHHH-cCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhcc-ccEEE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAG-CTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi 83 (243)
.+|+|.| +|.+|+.+++++.. .++++++..-+++..... .-.++... ..+.+.++.++ ++..+
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~---------~I~Gi~V~-----~~~~l~~~~~~~i~iai 68 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGR---------PVRGGVIE-----HVDLLPQRVPGRIEIAL 68 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC---------EETTEEEE-----EGGGHHHHSTTTCCEEE
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC---------EECCEEEe-----cHHHHHHHHhhcccEEE
Confidence 4899999 79999999997743 468999888755532211 01244443 33456666653 45444
Q ss_pred EeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecce
Q 026091 84 HVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSAS 131 (243)
Q Consensus 84 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~ 131 (243)
-+.. . . ....+++.+.+.| ++.+..++...
T Consensus 69 ~~i~---------~-~-------~~~~I~d~l~~~g-Ik~I~~f~~~~ 98 (126)
T d2dt5a2 69 LTVP---------R-E-------AAQKAADLLVAAG-IKGILNFAPVV 98 (126)
T ss_dssp ECSC---------H-H-------HHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred EeCC---------H-H-------HHHHHHHHHHHcC-CCEEeecCcee
Confidence 3311 0 1 1235677788889 98888776543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.75 E-value=0.028 Score=40.86 Aligned_cols=31 Identities=32% Similarity=0.254 Sum_probs=28.4
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
|+|+| +|.-|...+..|+++|++|.++-+++
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 79999 79999999999999999999998843
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=93.67 E-value=0.014 Score=39.87 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=23.5
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchh
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDL 46 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 46 (243)
|-++| +|.+|+++++.|.+.++.+.+.+| +++..+.+
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R-~~~~~~~l 38 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSR-SIDRARNL 38 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECS-SHHHHHHH
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeC-Chhhhcch
Confidence 45778 899999999988654444456777 65544333
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.62 E-value=0.02 Score=40.23 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=26.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+.+|+|+| +|++|-.++..|.+.|.+|.++.+
T Consensus 3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence 45799999 799999999999999977665554
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.62 E-value=0.047 Score=35.43 Aligned_cols=33 Identities=24% Similarity=0.162 Sum_probs=27.1
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc---CCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH---GYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~---g~~V~~~~r 37 (243)
.+++++|.| .|++|-.++..|.+. |.+|+++.|
T Consensus 19 ~p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~ 54 (117)
T d1aoga2 19 PPRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYR 54 (117)
T ss_dssp CCSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cCCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEec
Confidence 468999999 599999999766654 468999988
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.56 E-value=0.51 Score=33.73 Aligned_cols=93 Identities=22% Similarity=0.178 Sum_probs=59.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-C--------------
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-L-------------- 66 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~-------------- 66 (243)
..||.|+| .|.-|..++.+|.+.+. +.+++.. +....... ....++..+. +
T Consensus 15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainT-D~~~L~~~---------~~~~ki~ig~~~t~g~Gag~~p~~g~ 83 (209)
T d2vapa1 15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINT-DAQQLIRT---------KADKKILIGKKLTRGLGAGGNPKIGE 83 (209)
T ss_dssp CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEES-BHHHHHTS---------CCSEEEECCTTTTTTBCCTTCHHHHH
T ss_pred CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeC-CHHHHhcC---------CcchhcccccccccccccccchHHHH
Confidence 45899999 89999999999999873 3445555 33222111 1122222221 1
Q ss_pred ----CChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 67 ----NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 67 ----~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
.+.+.+.+.++++|.|+-+||..... -..++..+.+.+++.+
T Consensus 84 ~aa~e~~~~I~~~l~~~d~vfi~AGlGGGT-----------Gsgaapvia~~ake~g 129 (209)
T d2vapa1 84 EAAKESAEEIKAAIQDSDMVFITCGLGGGT-----------GTGSAPVVAEISKKIG 129 (209)
T ss_dssp HHHHHTHHHHHHHHTTCSEEEEEEETTSSH-----------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccCCCEEEEEEeCCCCc-----------cccHHHHHHHHHHHcC
Confidence 12357888888999999999986652 1223556788899888
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=93.46 E-value=0.1 Score=37.50 Aligned_cols=82 Identities=20% Similarity=0.158 Sum_probs=47.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhh-----hcCCCCCCCeEEEecCCCChhhHHHHhc-
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFL-----TNLPRASERLQIFNADLNNPESFDAAIA- 77 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~- 77 (243)
.++||++.| ++..+..+++.|.+.|++|.++....+........+ ... .....+.....+..+.+...+.++
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVL-AEEKGLPVFQPVSLRPQENQQLVAE 79 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHH-HHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhh-hhccCccccccccccchhhHHHHhh
Confidence 356899998 788999999999999999887765222111110000 000 011245565655555566666665
Q ss_pred -cccEEEEeee
Q 026091 78 -GCTGVIHVAA 87 (243)
Q Consensus 78 -~~d~vi~~a~ 87 (243)
++|.++....
T Consensus 80 ~~~d~~v~~~~ 90 (206)
T d1fmta2 80 LQADVMVVVAY 90 (206)
T ss_dssp TTCSEEEEESC
T ss_pred hcceEEEeecc
Confidence 4677665543
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=93.42 E-value=0.076 Score=34.31 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=28.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc---CCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH---GYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~---g~~V~~~~r~ 38 (243)
.+++++|+| .|++|-.++..|.+. |.+|+++.|.
T Consensus 17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~ 53 (117)
T d1feca2 17 APKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRG 53 (117)
T ss_dssp CCSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cCCeEEEEC-CChHHHHHHHHhHhhcccccccceeccc
Confidence 368999999 699999999876553 7899999983
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.36 E-value=0.32 Score=31.44 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=46.7
Q ss_pred CCCeEEEecCc----------hhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHH
Q 026091 4 EKGRVCVTGGT----------GFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFD 73 (243)
Q Consensus 4 ~~k~ilvtGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~ 73 (243)
..|+|||+|+. -|.+.+.+++|.+.|++++.+.- ++........ -...+...--..+.+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~-NPeTVstd~d---------~aD~lYfeplt~e~v~ 72 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC-NPETVSTDYD---------TSDRLYFEPVTLEDVL 72 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECC-CTTSSTTSTT---------SSSEEECCCCSHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEec-ChhhhhcChh---------hcCceEEccCCHHHHH
Confidence 46899999962 37899999999999999988877 5533321110 1112222333556677
Q ss_pred HHhc--cccEEEEe
Q 026091 74 AAIA--GCTGVIHV 85 (243)
Q Consensus 74 ~~~~--~~d~vi~~ 85 (243)
++++ ++|.|+-.
T Consensus 73 ~Ii~~E~p~~ii~~ 86 (121)
T d1a9xa4 73 EIVRIEKPKGVIVQ 86 (121)
T ss_dssp HHHHHHCCSEEECS
T ss_pred HHHHHhCCCEEEee
Confidence 7664 68888744
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=93.35 E-value=0.039 Score=41.96 Aligned_cols=33 Identities=21% Similarity=0.502 Sum_probs=28.9
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeCC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRSD 39 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 39 (243)
.+|+|+| +|.+|..++.+|+++|. +|.++.|+.
T Consensus 2 ~dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4799999 69999999999999995 799998843
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=93.35 E-value=0.73 Score=32.46 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=59.6
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-C----------------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-L---------------- 66 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~---------------- 66 (243)
||.|+| -|.-|..++.+|.+.+. +.+++.. +....... ....++..+. .
T Consensus 2 kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainT-D~~~L~~~---------~a~~ki~iG~~~t~G~G~g~~p~~g~~a 70 (194)
T d1w5fa1 2 KIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNT-DLQVLEAS---------NADVKIQIGENITRGLGAGGRPEIGEQA 70 (194)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEES-CHHHHHTC---------CCSEEEECCTTTTTTSCCTTCHHHHHHH
T ss_pred eEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcC-CHHHHhcC---------CcceEEecccccCCCcccccCchhhHhH
Confidence 789999 89999999999998873 4455555 33222111 1122332221 1
Q ss_pred --CChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 67 --NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 67 --~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
.+.+.+.+.+++.|.|+-+||..... -..++..+.+.|++.+
T Consensus 71 a~e~~~~I~~~l~~~d~vfi~AGlGGgT-----------GtgaapviA~~ake~g 114 (194)
T d1w5fa1 71 ALESEEKIREVLQDTHMVFITAGFGGGT-----------GTGASPVIAKIAKEMG 114 (194)
T ss_dssp HHHTHHHHHHHTTTCSEEEEEEETTSSH-----------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCc-----------ccchHHHHHHHHHHcC
Confidence 13467788888999999999986652 2234567888899988
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=93.34 E-value=0.037 Score=41.56 Aligned_cols=31 Identities=26% Similarity=0.232 Sum_probs=28.4
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
|+|+| +|..|..++.+|+++|++|+++.+..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 78999 69999999999999999999998843
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.33 E-value=0.051 Score=37.85 Aligned_cols=114 Identities=11% Similarity=0.043 Sum_probs=58.0
Q ss_pred CeEEEecC-chhhHHHHHHHHHHcC----CeEEEEEeCCchhhchhhhhhcC-----CCCCCCeEEEecCCCChhhHHHH
Q 026091 6 GRVCVTGG-TGFIGSWLIMRLLDHG----YSVRTTVRSDPEQKRDLSFLTNL-----PRASERLQIFNADLNNPESFDAA 75 (243)
Q Consensus 6 k~ilvtGa-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~ 75 (243)
+||.|+|| +.+.+..++..+.... -++..+++ +++. ..++.++.. .......... ...+..+.
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di-~e~~-~~~~~~d~~~~~~~~~~~~~~~~~-----~~td~~~a 74 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI-PEGK-EKLEIVGALAKRMVEKAGVPIEIH-----LTLDRRRA 74 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC-GGGH-HHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHH
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcC-CccH-HHHHHHHHHHHHHHHhcCCCceee-----ecCCchhh
Confidence 47999996 3344455554444332 37777777 3322 112211110 0001112211 22334567
Q ss_pred hccccEEEEeeeccCCC-CC-----------------Ch-HHHHHHHHHHHHHHHHHHHHhcCCccEEEEE
Q 026091 76 IAGCTGVIHVAAPIDIH-GK-----------------EP-EEVIIQRAVSGTIGILKSCLKSGTVKRVVYT 127 (243)
Q Consensus 76 ~~~~d~vi~~a~~~~~~-~~-----------------~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 127 (243)
++++|+||.+|+..... +. .+ .......|+.-...+++.+++.. ...++..
T Consensus 75 l~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~ 144 (169)
T d1s6ya1 75 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN 144 (169)
T ss_dssp HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred cCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEE
Confidence 88999999999864320 00 00 00123357777788888888887 4444443
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=93.29 E-value=0.025 Score=40.78 Aligned_cols=30 Identities=30% Similarity=0.323 Sum_probs=25.4
Q ss_pred CeEEEecCch-hhHHH-----HHHHHHHcCCeEEEEE
Q 026091 6 GRVCVTGGTG-FIGSW-----LIMRLLDHGYSVRTTV 36 (243)
Q Consensus 6 k~ilvtGatG-~iG~~-----l~~~L~~~g~~V~~~~ 36 (243)
||++||| || ++|+. |++.|.++|++|.++.
T Consensus 2 ~~~~i~g-t~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTG-TDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 7899999 66 88876 7788899999998874
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=92.98 E-value=0.046 Score=40.03 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=28.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCC-eEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGY-SVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 38 (243)
++|+|+| +|.-|...+..|.++|+ +|+++-++
T Consensus 1 P~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~ 33 (347)
T d1b5qa1 1 PRVIVVG-AGMSGISAAKRLSEAGITDLLILEAT 33 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECC
Confidence 4799999 69999999999999995 79998873
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.57 E-value=0.0092 Score=43.80 Aligned_cols=26 Identities=35% Similarity=0.368 Sum_probs=23.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeE
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSV 32 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V 32 (243)
+||+|+| +|-+|..++.+|+++|++|
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence 4799999 6999999999999999764
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.51 E-value=0.24 Score=35.32 Aligned_cols=84 Identities=11% Similarity=0.087 Sum_probs=52.0
Q ss_pred CCeEEEecCchhhHHH-HHHHH---HHcC-----CeEEEEEeCCchhhchhhhhhcC-----------CCCCCCeEEEec
Q 026091 5 KGRVCVTGGTGFIGSW-LIMRL---LDHG-----YSVRTTVRSDPEQKRDLSFLTNL-----------PRASERLQIFNA 64 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-l~~~L---~~~g-----~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 64 (243)
+-.++|.||||-+... |..+| ...| ..|++++|+..+..+-...+... ...-.++.++.+
T Consensus 20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~ 99 (203)
T d1qkia1 20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG 99 (203)
T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence 4579999999999886 33343 2333 57999999654322111111110 012357899999
Q ss_pred CCCChhhHHHHhc---------cccEEEEeeec
Q 026091 65 DLNNPESFDAAIA---------GCTGVIHVAAP 88 (243)
Q Consensus 65 D~~d~~~~~~~~~---------~~d~vi~~a~~ 88 (243)
|++|++++.++-+ ....|+++|-+
T Consensus 100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvp 132 (203)
T d1qkia1 100 QYDDAASYQRLNSHMNALHLGSQANRLFYLALP 132 (203)
T ss_dssp CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred cCCChhhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence 9999988777633 23467888754
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.23 E-value=0.083 Score=37.39 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=27.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC--CeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG--YSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g--~~V~~~~r~ 38 (243)
|||+|+| .|++|..++..|.+.+ .+|+++.|+
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~ 34 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKG 34 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4799999 6999999999998874 678888873
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=92.07 E-value=0.57 Score=32.32 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=45.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCC-----------CCCCCeEEEecCCCChhhH
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLP-----------RASERLQIFNADLNNPESF 72 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~d~~~~ 72 (243)
.+++||..|+ | .|. .+..|+++|++|++++. ++...+..+...... .......++.+|..+....
T Consensus 20 ~~~rvLd~GC-G-~G~-~a~~la~~G~~V~gvD~-S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 95 (201)
T d1pjza_ 20 PGARVLVPLC-G-KSQ-DMSWLSGQGYHVVGAEL-SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 95 (201)
T ss_dssp TTCEEEETTT-C-CSH-HHHHHHHHCCEEEEEEE-CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCEEEEecC-c-CCH-HHHHHHHcCCceEeecc-cHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence 3579999993 3 444 45578889999999999 554333333221110 0134567888888765442
Q ss_pred HHHhccccEEEEee
Q 026091 73 DAAIAGCTGVIHVA 86 (243)
Q Consensus 73 ~~~~~~~d~vi~~a 86 (243)
. ...+|.|+...
T Consensus 96 ~--~~~~D~i~~~~ 107 (201)
T d1pjza_ 96 D--IGHCAAFYDRA 107 (201)
T ss_dssp H--HHSEEEEEEES
T ss_pred c--ccceeEEEEEe
Confidence 2 22457766543
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.91 E-value=0.11 Score=38.53 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=28.3
Q ss_pred CeEEEecCchhhHHHHHHHHHHcC-CeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 38 (243)
.+|+|+| .|..|..++..|.+.| ++|.++-|+
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~ 34 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESS 34 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 5799999 6999999999999999 588888873
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=91.85 E-value=0.68 Score=31.36 Aligned_cols=65 Identities=17% Similarity=0.244 Sum_probs=37.8
Q ss_pred CeEEEecCchhhHHH-HHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 6 GRVCVTGGTGFIGSW-LIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 6 k~ilvtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.||.|+| +|.+|.. .+..|.+. +.+++++.-.+++...... ... ++ +. .+.++++++++|+|+
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~--~~~-----~~-----~~--~~~~~~l~~~~D~V~ 66 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPIC--ESW-----RI-----PY--ADSLSSLAASCDAVF 66 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHH--HHH-----TC-----CB--CSSHHHHHTTCSEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhh--hcc-----cc-----cc--cccchhhhhhccccc
Confidence 4799999 7999975 56666554 5777777643443322211 111 11 12 234555668899987
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
-+
T Consensus 67 I~ 68 (164)
T d1tlta1 67 VH 68 (164)
T ss_dssp EC
T ss_pred cc
Confidence 55
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=91.85 E-value=0.17 Score=36.00 Aligned_cols=89 Identities=16% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCCCCCeEEEecCchhhHHH-HHHHHH---HcC-----CeEEEEEeCCchhhchhhhh----hc-------CCCCCCCeE
Q 026091 1 MEEEKGRVCVTGGTGFIGSW-LIMRLL---DHG-----YSVRTTVRSDPEQKRDLSFL----TN-------LPRASERLQ 60 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~-l~~~L~---~~g-----~~V~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~~ 60 (243)
|+.-...++|.||||-+.+. |..+|. ..| ..|++++|+..+..+-...+ .. ....-.++.
T Consensus 1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~ 80 (195)
T d1h9aa1 1 VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFS 80 (195)
T ss_dssp CCCCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEE
T ss_pred CCCCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccc
Confidence 44333344578999999986 222333 223 57999999654322211111 00 011245789
Q ss_pred EEecCCCChhhHHHHhc-----------cccEEEEeeecc
Q 026091 61 IFNADLNNPESFDAAIA-----------GCTGVIHVAAPI 89 (243)
Q Consensus 61 ~~~~D~~d~~~~~~~~~-----------~~d~vi~~a~~~ 89 (243)
++++|++++++..++.+ ....++++|-++
T Consensus 81 y~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~rifYLAvpP 120 (195)
T d1h9aa1 81 YRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAP 120 (195)
T ss_dssp EEECCTTCTTTHHHHHHHHHHHHHHHTCCSCEEEEECSCG
T ss_pred eeeEeeccHhhHHHHHHHHHHHHhhcCCCcceEEEEecCH
Confidence 99999998865555432 124688887553
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.76 E-value=0.21 Score=34.46 Aligned_cols=23 Identities=39% Similarity=0.339 Sum_probs=18.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH 28 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~ 28 (243)
+.+|.|+| +|++|+..++.|.+.
T Consensus 7 k~kv~iIG-~G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 7 KFGVVVVG-VGRAGSVRLRDLKDP 29 (172)
T ss_dssp SEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred CcEEEEEc-CCHHHHHHHHHHHhC
Confidence 34899999 799999988887654
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.54 E-value=0.2 Score=41.35 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=27.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-CeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-YSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (243)
..+|+|+| .|.+|..+++-|+..| -++++++.
T Consensus 25 ~s~VlvvG-~gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 25 SAHVCLIN-ATATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp HCEEEECC-CSHHHHHHHHHHHTTTCSEEEEECC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 46899999 5889999999999989 57777765
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.51 E-value=0.15 Score=37.52 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=28.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHH-cCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLD-HGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~-~g~~V~~~~r 37 (243)
+.|+|+|-| .|.+|+++++.|.+ .|..|++++-
T Consensus 31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence 568999999 79999999999986 4899988875
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.45 E-value=1.5 Score=30.87 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=59.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-C----------------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-L---------------- 66 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~---------------- 66 (243)
+|-|+| -|.-|..++.+|.+.+. +.+++.. +....... ....+...+. .
T Consensus 3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainT-D~~~L~~~---------~~~~ki~iG~~~t~G~Gagg~p~~g~~a 71 (198)
T d1rq2a1 3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINT-DAQALLMS---------DADVKLDVGRDSTRGLGAGADPEVGRKA 71 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEES-CHHHHHHC---------CCSEEEECCTTTC-----CCCHHHHHHH
T ss_pred eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcc-hHHHHhcC---------CcchhhccccccccCCCcCcChhhhHhh
Confidence 467788 78889999999999873 4555554 33222111 1122333321 1
Q ss_pred --CChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 67 --NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 67 --~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
.+.+.+.+.+++.|.||-+||..... -..++.-+.+.|++.+
T Consensus 72 a~e~~~~I~~~l~~~d~vfi~AGlGGgT-----------GtGaaPviA~iake~g 115 (198)
T d1rq2a1 72 AEDAKDEIEELLRGADMVFVTAGEGGGT-----------GTGGAPVVASIARKLG 115 (198)
T ss_dssp HHHTHHHHHHHHTTCSEEEEEEETTSSH-----------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCEEEEEEecCCCC-----------CcchHHHHHHHHHHcC
Confidence 24478888888999999999986652 1234567788899988
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=91.45 E-value=0.088 Score=41.06 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=27.3
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|+|+| +|+-|..++.+|++.|++|.++-+
T Consensus 5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa 33 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM 33 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence 78899 899999999999999999999976
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=91.39 E-value=0.69 Score=32.33 Aligned_cols=74 Identities=22% Similarity=0.239 Sum_probs=46.7
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
+.+||=+| || .|.. +..|+++|++|++++. ++...+........ ..-..+++...|+.+... -..+|.|+.
T Consensus 31 ~grvLDiG-cG-~G~~-~~~la~~g~~v~gvD~-s~~~l~~a~~~~~~-~~~~~~~~~~~d~~~~~~----~~~fD~I~~ 101 (198)
T d2i6ga1 31 PGRTLDLG-CG-NGRN-SLYLAANGYDVTAWDK-NPASMANLERIKAA-EGLDNLQTDLVDLNTLTF----DGEYDFILS 101 (198)
T ss_dssp SCEEEEET-CT-TSHH-HHHHHHTTCEEEEEES-CHHHHHHHHHHHHH-TTCTTEEEEECCTTTCCC----CCCEEEEEE
T ss_pred CCcEEEEC-CC-CCHH-HHHHHHHhhhhccccC-cHHHHHHHHHHhhh-ccccchhhhheecccccc----cccccEEEE
Confidence 46899999 45 6664 4578889999999998 55444333322211 112357888888876542 135798885
Q ss_pred eee
Q 026091 85 VAA 87 (243)
Q Consensus 85 ~a~ 87 (243)
...
T Consensus 102 ~~~ 104 (198)
T d2i6ga1 102 TVV 104 (198)
T ss_dssp ESC
T ss_pred eee
Confidence 543
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=91.38 E-value=0.33 Score=33.71 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=25.1
Q ss_pred CCeEEEecCchhhHHH-HHHHHHHcC--CeEEEEEeCCchh
Q 026091 5 KGRVCVTGGTGFIGSW-LIMRLLDHG--YSVRTTVRSDPEQ 42 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-l~~~L~~~g--~~V~~~~r~~~~~ 42 (243)
+.||.|+| +|.+|+. .++.+.+.+ .++.++.-++++.
T Consensus 3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~ 42 (181)
T d1zh8a1 3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSH 42 (181)
T ss_dssp CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHH
T ss_pred CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhh
Confidence 34899999 7999986 467776643 4777665435533
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=91.36 E-value=0.1 Score=35.61 Aligned_cols=32 Identities=19% Similarity=0.112 Sum_probs=26.6
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP 40 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (243)
||.++| .|.+|+.+++.|++.|+.+ +..|+.+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~ 33 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFE 33 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTH
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHH
Confidence 799999 8999999999999988866 5667443
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.27 E-value=0.12 Score=34.42 Aligned_cols=33 Identities=27% Similarity=0.321 Sum_probs=27.6
Q ss_pred CCeEEEecCchhhHHHHHHHHH----HcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLL----DHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~----~~g~~V~~~~r~ 38 (243)
.++|+|.| .|++|-.++..|. +.|.+|+.+.++
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~ 73 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPE 73 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence 47899999 6999999998885 358999999883
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.11 E-value=0.11 Score=39.73 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=27.7
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+|+| +|.-|...+..|.++|++|+++-++
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~ 31 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEAR 31 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence 78999 7999999999999999999999873
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=91.10 E-value=0.09 Score=33.41 Aligned_cols=36 Identities=14% Similarity=-0.088 Sum_probs=30.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP 40 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (243)
..|+|+|.| +|.-|.-++..|++.+.+|+.+.|+..
T Consensus 31 ~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 31 VGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp TTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 468999999 799999999999988878777777443
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.03 E-value=0.055 Score=38.26 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=31.9
Q ss_pred CCCCCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 1 MEEEKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 1 m~~~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|+...++|+|+| .|..|...+..|.+.|.+|.++.+
T Consensus 1 m~~~~~~VvIIG-gGpaGl~aA~~~ar~g~~v~vie~ 36 (192)
T d1vdca1 1 LETHNTRLCIVG-SGPAAHTAAIYAARAELKPLLFEG 36 (192)
T ss_dssp CEEEEEEEEEEC-CSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCcccceEEEEC-CCHHHHHHHHHHHHcCCcEEEEEe
Confidence 566678999999 699999999999999999998876
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=90.93 E-value=0.96 Score=34.45 Aligned_cols=115 Identities=13% Similarity=-0.038 Sum_probs=58.5
Q ss_pred CCeEEEec-CchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh-hhHHHHhccccEE
Q 026091 5 KGRVCVTG-GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP-ESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~v 82 (243)
.++||=.+ ++|..+.+ ++..+.+|++++. ++...+..+...... .-..++++.+|..+. +.+...-+.+|.|
T Consensus 146 g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~-s~~al~~a~~n~~~n-gl~~~~~i~~d~~~~~~~~~~~~~~fD~V 219 (318)
T d1wxxa2 146 GERALDVFSYAGGFALH----LALGFREVVAVDS-SAEALRRAEENARLN-GLGNVRVLEANAFDLLRRLEKEGERFDLV 219 (318)
T ss_dssp EEEEEEETCTTTHHHHH----HHHHEEEEEEEES-CHHHHHHHHHHHHHT-TCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCeeeccCCCCcHHHHH----HHhcCCcEEeecc-hHHHHHHHHHHHHHc-CCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence 45665443 45555444 3345689999999 554433333222211 123688999998764 3333333468999
Q ss_pred EEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 83 IHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 83 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
|......... ...... .......+++.+.+.-+..-++.++|.
T Consensus 220 i~DpP~~~~~-~~~~~~----~~~~~~~l~~~a~~lLkpGG~Lv~~sc 262 (318)
T d1wxxa2 220 VLDPPAFAKG-KKDVER----AYRAYKEVNLRAIKLLKEGGILATASC 262 (318)
T ss_dssp EECCCCSCCS-TTSHHH----HHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEcCCccccc-hHHHHH----HHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9775433222 122211 222334455555443213345556654
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.76 E-value=0.1 Score=35.67 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=26.0
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
||+|+| .|++|..++..|. ++.+|+++.|.
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~ 31 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKE 31 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEecc
Confidence 799999 6999999999885 47899999873
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.57 E-value=0.18 Score=36.00 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=27.4
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|||++.| ++..|..+++.|.+.|++|.++..
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT 31 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence 4788888 789999999999999999998775
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.98 E-value=0.4 Score=34.58 Aligned_cols=79 Identities=13% Similarity=0.031 Sum_probs=46.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhh----------------cCCCCCCCeEEEecCCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLT----------------NLPRASERLQIFNADLN 67 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~D~~ 67 (243)
..++||..| ||. |.. +..|+++|++|++++- ++...+...... .....+..++++.+|+.
T Consensus 45 ~~~rvLd~G-CG~-G~~-a~~LA~~G~~V~gvD~-S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 120 (229)
T d2bzga1 45 SGLRVFFPL-CGK-AVE-MKWFADRGHSVVGVEI-SELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF 120 (229)
T ss_dssp CSCEEEETT-CTT-CTH-HHHHHHTTCEEEEECS-CHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred CCCEEEEeC-CCC-cHH-HHHHHhCCCcEEEEeC-CHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence 346899999 555 544 6678899999999998 543322211110 00113457888999886
Q ss_pred ChhhHHHHhccccEEEEeeec
Q 026091 68 NPESFDAAIAGCTGVIHVAAP 88 (243)
Q Consensus 68 d~~~~~~~~~~~d~vi~~a~~ 88 (243)
+..... ...+|+|+-.+..
T Consensus 121 ~l~~~~--~~~fd~i~~~~~l 139 (229)
T d2bzga1 121 DLPRTN--IGKFDMIWDRGAL 139 (229)
T ss_dssp GGGGSC--CCCEEEEEESSST
T ss_pred hccccc--cCceeEEEEEEEE
Confidence 544211 1235777655443
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.82 E-value=2.2 Score=30.02 Aligned_cols=91 Identities=12% Similarity=0.106 Sum_probs=58.7
Q ss_pred eEEEecCchhhHHHHHHHHHHcCC---eEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecC-C----------------
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGY---SVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNAD-L---------------- 66 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~---------------- 66 (243)
+|-|+| -|..|..++.+|.+.+. +.+++.. +....... ....++..++ +
T Consensus 3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainT-D~~~L~~~---------~~~~ki~iG~~~~~g~G~gg~p~~g~~a 71 (198)
T d1ofua1 3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANT-DAQALKNI---------AARTVLQLGPGVTKGLGAGANPEVGRQA 71 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEES-BTGGGSSC---------SCSEEEECCHHHHTTBCCCSCHHHHHHH
T ss_pred eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeC-cHHHHhcC---------CccceeccccccccCCCCCCChHHHHHH
Confidence 578888 89999999999999873 5555555 32221111 1112222221 1
Q ss_pred --CChhhHHHHhccccEEEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 026091 67 --NNPESFDAAIAGCTGVIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSG 119 (243)
Q Consensus 67 --~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (243)
.+.+.+.+.+++.|.||-+||..... -..++..+.+.|++.+
T Consensus 72 a~e~~~~I~~~l~~~d~vfi~AGlGGGT-----------GtgaapviA~~ake~g 115 (198)
T d1ofua1 72 ALEDRERISEVLEGADMVFITTGMGGGT-----------GTGAAPIIAEVAKEMG 115 (198)
T ss_dssp HHHTHHHHHHHHTTCSEEEEEEETTSSH-----------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCCCc-----------cccHHHHHHHHHHHcC
Confidence 14467888888999999999987652 1234556888899988
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=89.80 E-value=0.14 Score=39.89 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=26.9
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
++|+| +|+-|..++.+|.+.|++|.++-+
T Consensus 10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa 38 (370)
T d3coxa1 10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM 38 (370)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence 78889 899999999999999999999976
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.67 E-value=0.17 Score=36.45 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=28.2
Q ss_pred CeEEEecCchhhHHHHHHHHHHc--CCeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH--GYSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~--g~~V~~~~r~ 38 (243)
+||+|+| +|.-|...++.|.+. |++|+++.+.
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~ 35 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQ 35 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 6899999 799999999999765 7899999873
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.62 E-value=0.35 Score=33.49 Aligned_cols=65 Identities=22% Similarity=0.264 Sum_probs=48.3
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
+.|+|.|+| -|..|.+-+.-|.+.|.+|++--|.......... . ++++ ..++.++.+..|+|.
T Consensus 15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~---~-----~Gf~--------v~~~~eA~~~aDiim 77 (182)
T d1np3a2 15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE---A-----HGLK--------VADVKTAVAAADVVM 77 (182)
T ss_dssp HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH---H-----TTCE--------EECHHHHHHTCSEEE
T ss_pred CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh---h-----hccc--------cccHHHHhhhcCeee
Confidence 468999999 8999999999999999999988884433322221 1 1333 356778889999988
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
.+
T Consensus 78 ~L 79 (182)
T d1np3a2 78 IL 79 (182)
T ss_dssp EC
T ss_pred ee
Confidence 66
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.37 E-value=0.4 Score=33.31 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=26.8
Q ss_pred CeEEEecCchhhHHHHHHHHHHc-CCeEEEEEeCCch
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRSDPE 41 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~ 41 (243)
.||.|+| +|.+|+..++.|... +.+|+++.-.+++
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~ 37 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLE 37 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHH
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCcc
Confidence 4799999 799999999988776 5788876542543
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=89.35 E-value=0.17 Score=39.11 Aligned_cols=29 Identities=31% Similarity=0.424 Sum_probs=26.9
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
++|+| +|.-|..++.+|++.|++|.++-+
T Consensus 7 viIVG-sG~aG~v~A~~La~~G~kVlvLEa 35 (379)
T d2f5va1 7 VVIVG-SGPIGCTYARELVGAGYKVAMFDI 35 (379)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence 88999 899999999999999999999965
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=89.27 E-value=0.18 Score=36.79 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=28.3
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
-|+|+| +|..|...+..|.+.|++|.++.++
T Consensus 4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~ 34 (251)
T d2i0za1 4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKG 34 (251)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 489999 6999999999999999999999884
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.97 E-value=0.47 Score=34.45 Aligned_cols=74 Identities=16% Similarity=0.107 Sum_probs=47.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
.++||=.| ||. |.. +..|+++|++|++++- ++...+..+.... ..+.+++++.+|+.+... -+.+|.|+.
T Consensus 42 ~~~iLDiG-cGt-G~~-~~~l~~~~~~v~gvD~-s~~mi~~a~~~~~--~~~~~i~~~~~d~~~l~~----~~~fD~I~~ 111 (251)
T d1wzna1 42 VRRVLDLA-CGT-GIP-TLELAERGYEVVGLDL-HEEMLRVARRKAK--ERNLKIEFLQGDVLEIAF----KNEFDAVTM 111 (251)
T ss_dssp CCEEEEET-CTT-CHH-HHHHHHTTCEEEEEES-CHHHHHHHHHHHH--HTTCCCEEEESCGGGCCC----CSCEEEEEE
T ss_pred CCEEEEeC-CCC-Ccc-chhhcccceEEEEEee-ccccccccccccc--cccccchheehhhhhccc----ccccchHhh
Confidence 46899998 443 544 4568889999999998 5543333322211 123478999999876541 245798886
Q ss_pred eeec
Q 026091 85 VAAP 88 (243)
Q Consensus 85 ~a~~ 88 (243)
..+.
T Consensus 112 ~~~~ 115 (251)
T d1wzna1 112 FFST 115 (251)
T ss_dssp CSSG
T ss_pred hhhh
Confidence 6443
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=88.64 E-value=0.22 Score=37.89 Aligned_cols=31 Identities=35% Similarity=0.546 Sum_probs=28.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.|+|+| +|.-|..++.+|.+.|.+|.++.+.
T Consensus 9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~ 39 (298)
T d1w4xa1 9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETA 39 (298)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcC
Confidence 699999 6999999999999999999999883
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.60 E-value=0.34 Score=32.83 Aligned_cols=34 Identities=26% Similarity=0.203 Sum_probs=28.3
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCe-EEEEEeCC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYS-VRTTVRSD 39 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~-V~~~~r~~ 39 (243)
.++|+|+| .|..|.-.+..+.+.|.+ |+++.|++
T Consensus 45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 46899999 699999999999999864 77777743
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=88.52 E-value=0.26 Score=37.57 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=22.2
Q ss_pred CeEEEecC-ch-hh--HHHHHHHHHHcCCeEEEEEe
Q 026091 6 GRVCVTGG-TG-FI--GSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGa-tG-~i--G~~l~~~L~~~g~~V~~~~r 37 (243)
|||+|++| || -+ ..+|+++|.++||+|..++.
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~ 36 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT 36 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 57777763 32 21 22488899899999998876
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=88.41 E-value=0.36 Score=29.46 Aligned_cols=31 Identities=23% Similarity=0.203 Sum_probs=26.6
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|||||+| +|.=-.+++++|.+..+++++.--
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pG 31 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPG 31 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecC
Confidence 4899999 788899999999988888887644
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=88.32 E-value=0.12 Score=35.67 Aligned_cols=75 Identities=24% Similarity=0.264 Sum_probs=42.1
Q ss_pred CeEEEecCchhhHHHHHH-HHHHc-----CCeEEEEEeCCchhhchhhhhhc-CCCCCCCeEEEecCCCChhhHHHHhcc
Q 026091 6 GRVCVTGGTGFIGSWLIM-RLLDH-----GYSVRTTVRSDPEQKRDLSFLTN-LPRASERLQIFNADLNNPESFDAAIAG 78 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~-~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~ 78 (243)
+||.|+|| |.+|...+- .|+.. ..++.++++ +++.......+.. .. ......... ....+.+++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Di-d~~k~~~~~d~~~~~~--~~~~~~~~t-----~~~~~~l~~ 71 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDI-DEEKQKIVVDFVKRLV--KDRFKVLIS-----DTFEGAVVD 71 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECS-CHHHHHHHHHHHHHHH--TTSSEEEEC-----SSHHHHHTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEec-CcHHHHHHHHHHHhhh--ccCceEEEe-----cCcccccCC
Confidence 37999996 667766553 33322 358888888 5544332222211 11 112222221 234567789
Q ss_pred ccEEEEeeecc
Q 026091 79 CTGVIHVAAPI 89 (243)
Q Consensus 79 ~d~vi~~a~~~ 89 (243)
+|+||.+|+..
T Consensus 72 aDvVVita~~~ 82 (162)
T d1up7a1 72 AKYVIFQFRPG 82 (162)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEecccC
Confidence 99999999864
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=87.83 E-value=0.78 Score=35.37 Aligned_cols=72 Identities=21% Similarity=0.287 Sum_probs=49.2
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-C-CeEEEEEeCCchh-hchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-G-YSVRTTVRSDPEQ-KRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+++.|+| +|..+..-++.+.+. + .+|.+.+| +++. .....++.. ..++++..+ ++++++++++|+
T Consensus 128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r-~~~~~~~~~~~l~~----~~g~~v~~~-----~s~~eav~~ADI 196 (340)
T d1x7da_ 128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDT-DPLATAKLIANLKE----YSGLTIRRA-----SSVAEAVKGVDI 196 (340)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECS-SHHHHHHHHHHHTT----CTTCEEEEC-----SSHHHHHTTCSE
T ss_pred CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEec-ChHHHHHHHHhhhh----ccCCCceec-----CCHHHHHhcCCc
Confidence 47899999 899999999888654 4 67999999 5433 323333322 124555544 367788999999
Q ss_pred EEEeee
Q 026091 82 VIHVAA 87 (243)
Q Consensus 82 vi~~a~ 87 (243)
|+-+.+
T Consensus 197 i~t~Ta 202 (340)
T d1x7da_ 197 ITTVTA 202 (340)
T ss_dssp EEECCC
T ss_pred eeeccc
Confidence 987654
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=87.75 E-value=0.2 Score=36.74 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.0
Q ss_pred CeEEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 6 GRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 6 k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
.-|+|+| .|..|...+..|.+.|++|.++.+.
T Consensus 5 ~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~ 36 (253)
T d2gqfa1 5 SENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNG 36 (253)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEC-cCHHHHHHHHHHHHCCCcEEEEecC
Confidence 4699999 6999999999999999999999884
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=87.63 E-value=0.25 Score=35.56 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=28.3
Q ss_pred CCeEEEecCchhhHHH-----HHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSW-----LIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-----l~~~L~~~g~~V~~~~r 37 (243)
.|.|.|+|+-|++|+. ++.+|+++|++|.+++-
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 5679999999999986 66778888999999985
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.45 E-value=0.24 Score=37.41 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=27.9
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+|+| +|..|...+..|++.|.+|.++.+.
T Consensus 19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~ 48 (308)
T d1y0pa2 19 VVVVG-SGGAGFSAAISATDSGAKVILIEKE 48 (308)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEecC
Confidence 89999 7999999999999999999999873
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=87.33 E-value=0.23 Score=36.87 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=28.1
Q ss_pred CCeEEEecCchhhHHH-----HHHHHHHcCCeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSW-----LIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-----l~~~L~~~g~~V~~~~r~ 38 (243)
||+|.|+| =|++|+. |+..|+++|++|.+++-+
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 57899998 8999987 455888899999999983
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=87.14 E-value=1.2 Score=30.16 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=23.1
Q ss_pred CeEEEecCchhhHHH-HHHHHHHc-CCeEEEEEeCCch
Q 026091 6 GRVCVTGGTGFIGSW-LIMRLLDH-GYSVRTTVRSDPE 41 (243)
Q Consensus 6 k~ilvtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~ 41 (243)
.||.|+| +|.+|.. .+..|.+. +.++.++++ ++.
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~-~~~ 37 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTR-NPK 37 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECS-CHH
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEC-CHH
Confidence 4899999 7888965 56666555 357666555 543
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=86.98 E-value=3.2 Score=31.41 Aligned_cols=116 Identities=12% Similarity=0.015 Sum_probs=58.7
Q ss_pred CCeEEEec-CchhhHHHHHHHHHHcC-CeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh-hHHHHhccccE
Q 026091 5 KGRVCVTG-GTGFIGSWLIMRLLDHG-YSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE-SFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtG-atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~ 81 (243)
.++||=.| ++|..+.++ +..| .+|+++.. ++...+.............+++++.+|+.+.- .+...-+.+|.
T Consensus 146 g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~-s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~ 220 (324)
T d2as0a2 146 GDRVLDVFTYTGGFAIHA----AIAGADEVIGIDK-SPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI 220 (324)
T ss_dssp TCEEEETTCTTTHHHHHH----HHTTCSEEEEEES-CHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCeeecccCcccchhhhh----hhcCCcEEEeecC-CHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence 46676655 234444432 3456 47999999 55544333333222223357889999976432 22222245899
Q ss_pred EEEeeeccCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEecc
Q 026091 82 VIHVAAPIDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSSA 130 (243)
Q Consensus 82 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 130 (243)
||...-..... ... ...-......++..+.+.-+.+-++.++|.
T Consensus 221 Vi~DpP~~~~~-~~~----~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~ 264 (324)
T d2as0a2 221 VVLDPPAFVQH-EKD----LKAGLRAYFNVNFAGLNLVKDGGILVTCSC 264 (324)
T ss_dssp EEECCCCSCSS-GGG----HHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred hhcCCccccCC-HHH----HHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 99764332221 111 222233455566666554213345555543
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=86.82 E-value=0.29 Score=38.44 Aligned_cols=32 Identities=19% Similarity=0.087 Sum_probs=24.3
Q ss_pred CeEEEecC------chhhH---HHHHHHHHHcCCeEEEEEe
Q 026091 6 GRVCVTGG------TGFIG---SWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 6 k~ilvtGa------tG~iG---~~l~~~L~~~g~~V~~~~r 37 (243)
||||+++. +|++| ..|+++|.++||+|++++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 36777654 45555 6679999999999999874
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.67 E-value=0.24 Score=35.57 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=28.6
Q ss_pred CCeEEEecCchhhHHH-----HHHHHHHcCCeEEEEEe
Q 026091 5 KGRVCVTGGTGFIGSW-----LIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~-----l~~~L~~~g~~V~~~~r 37 (243)
||.|.|+++-|++|+. ++..|+++|++|.+++-
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~ 38 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDA 38 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 5789999999999976 67788888999999986
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=86.43 E-value=1.1 Score=30.09 Aligned_cols=72 Identities=8% Similarity=-0.036 Sum_probs=43.9
Q ss_pred CCCeEEEecCchh--hHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGGTGF--IGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++++|.++|-... +...+++.|...|.+++.++- ............. .+.+++.+ +++.++++++|+
T Consensus 2 ~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p-~~~~~~~~~~~~~---~~~~~~~~-------~d~~eai~~aDv 70 (153)
T d1pg5a2 2 DGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLIS-PQLLRARKEILDE---LNYPVKEV-------ENPFEVINEVDV 70 (153)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEEC-CGGGCCCHHHHTT---CCSCEEEE-------SCGGGTGGGCSE
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEec-ccccccchhhccc---CCCeEEEE-------eCHHHHhhcCCe
Confidence 4689999998554 999999999999988766554 3322111111111 12234332 234467888998
Q ss_pred EEEee
Q 026091 82 VIHVA 86 (243)
Q Consensus 82 vi~~a 86 (243)
|+-.-
T Consensus 71 vy~~~ 75 (153)
T d1pg5a2 71 LYVTR 75 (153)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 87553
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=86.34 E-value=4.3 Score=31.67 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=48.9
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhc---------CCCCCCCeEEEecCCCCh---hhH
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTN---------LPRASERLQIFNADLNNP---ESF 72 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~~~~D~~d~---~~~ 72 (243)
.-|||=.+ ...-|-...+.|++.|++|+-+-+ ... .+..+.... ....+.+=+-+..|++++ +.+
T Consensus 7 GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~-p~~-gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~ 83 (417)
T d1q7ea_ 7 GIKVLDFT-GVQSGPSCTQMLAWFGADVIKIER-PGV-GDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVM 83 (417)
T ss_dssp TCEEEECC-CTTHHHHHHHHHHHTTCEEEEEEC-TTT-CCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHH
T ss_pred CCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECC-CCC-CCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHH
Confidence 34555544 445566677788889999998875 210 011110000 000122346788999987 466
Q ss_pred HHHhccccEEEEeeec
Q 026091 73 DAAIAGCTGVIHVAAP 88 (243)
Q Consensus 73 ~~~~~~~d~vi~~a~~ 88 (243)
.++++++|+||++--+
T Consensus 84 ~~Li~~aDv~i~n~~p 99 (417)
T d1q7ea_ 84 EKLIREADILVENFHP 99 (417)
T ss_dssp HHHHHHCSEEEECCCC
T ss_pred HHHHhcCcccEeccCC
Confidence 6888899999999543
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=86.28 E-value=1.1 Score=31.10 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=49.7
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHh--ccccEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAI--AGCTGVIHV 85 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ 85 (243)
+.|=+ |-+-|.| .+++++++.+|++++| ++......... ...++.++..+..+.+.+..-. +++|.|+--
T Consensus 21 ~~vD~-T~G~GGh-s~~iL~~~~~viaiD~-D~~ai~~a~~~-----~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~D 92 (182)
T d1wg8a2 21 VYVDA-TLGGAGH-ARGILERGGRVIGLDQ-DPEAVARAKGL-----HLPGLTVVQGNFRHLKRHLAALGVERVDGILAD 92 (182)
T ss_dssp EEEET-TCTTSHH-HHHHHHTTCEEEEEES-CHHHHHHHHHT-----CCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred EEEEe-CCCCcHH-HHHHhcccCcEEEEhh-hhhHHHHHhhc-----cccceeEeehHHHHHHHHHHHcCCCccCEEEEE
Confidence 44443 4444556 4566777889999999 76544333322 2358999999988876654443 468988877
Q ss_pred eeccCC
Q 026091 86 AAPIDI 91 (243)
Q Consensus 86 a~~~~~ 91 (243)
-|..+.
T Consensus 93 LGvSs~ 98 (182)
T d1wg8a2 93 LGVSSF 98 (182)
T ss_dssp CSCCHH
T ss_pred ccCCHH
Confidence 776554
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=86.24 E-value=0.36 Score=34.30 Aligned_cols=30 Identities=20% Similarity=0.005 Sum_probs=27.5
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|+| +|+.|...+.++.+.|.+|.++-++
T Consensus 5 vvVIG-~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIG-GGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEEC-CSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCEEEEEecc
Confidence 78999 5999999999999999999999874
|
| >d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD domain: MrsD species: Bacillus sp. hil-y85/54728 [TaxId: 69002]
Probab=86.07 E-value=0.25 Score=34.62 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=24.0
Q ss_pred CCCeEEEecCchhhH----HHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIG----SWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG----~~l~~~L~~~g~~V~~~~r 37 (243)
++|||+ .|.||.++ ..+++.|.+.|++|.++..
T Consensus 5 ~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~T 41 (183)
T d1p3y1_ 5 KDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVMT 41 (183)
T ss_dssp GGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred CCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 567766 36677665 3577778778999998876
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=85.37 E-value=0.32 Score=36.97 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=28.0
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+|+| +|..|...+..|++.|++|+++.+.
T Consensus 26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~ 55 (322)
T d1d4ca2 26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKE 55 (322)
T ss_dssp EEEEC-SSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 89999 7999999999999999999999873
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.37 E-value=0.31 Score=35.02 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=28.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcC-------CeEEEEEeC
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHG-------YSVRTTVRS 38 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g-------~~V~~~~r~ 38 (243)
+.+|+|+| +|--|...+.+|+++| ++|++..+.
T Consensus 2 p~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~ 41 (239)
T d1lqta2 2 PYYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEML 41 (239)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESS
T ss_pred CcEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecC
Confidence 46899999 7999999999999988 479988883
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=85.19 E-value=0.63 Score=29.85 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+..||+|-|-||..|+.-+++..+.|.+|++=+.
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVt 38 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVT 38 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEc
Confidence 4569999999999999999999999999887776
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=84.96 E-value=0.46 Score=35.29 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=27.6
Q ss_pred eEEEecCchhhHHHHHHHHHHc-CCeEEEEEeC
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDH-GYSVRTTVRS 38 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~-g~~V~~~~r~ 38 (243)
-|+|+| .|.-|...+.+|+++ |++|.++.++
T Consensus 35 DViVIG-aGpaGL~aA~~LA~~~G~~V~vlE~~ 66 (278)
T d1rp0a1 35 DVVVVG-AGSAGLSAAYEISKNPNVQVAIIEQS 66 (278)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred CEEEEC-CCHHHHHHHHHHHHccCCeEEEEecC
Confidence 389999 599999999999875 9999999984
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=84.66 E-value=1.5 Score=32.32 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=44.5
Q ss_pred CCeEEEecC-chhhHHHHHHHHHHc-CCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 5 KGRVCVTGG-TGFIGSWLIMRLLDH-GYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 5 ~k~ilvtGa-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
..+||=+|+ +|.+... |+++ |.+|++++- ++...+............++++++.+|..+... . -..+|+|
T Consensus 68 ~~~vLDiGcG~G~~~~~----la~~~~~~v~gvD~-s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~-~--~~sfD~V 139 (282)
T d2o57a1 68 QAKGLDLGAGYGGAARF----LVRKFGVSIDCLNI-APVQNKRNEEYNNQAGLADNITVKYGSFLEIPC-E--DNSYDFI 139 (282)
T ss_dssp TCEEEEETCTTSHHHHH----HHHHHCCEEEEEES-CHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-C--TTCEEEE
T ss_pred CCEEEEeCCCCcHHHhh----hhccCCcEEEEEec-cchhhhhhhcccccccccccccccccccccccc-c--ccccchh
Confidence 468998885 4444333 4443 789999998 554333333222211224589999999987531 1 1347998
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
+.....
T Consensus 140 ~~~~~l 145 (282)
T d2o57a1 140 WSQDAF 145 (282)
T ss_dssp EEESCG
T ss_pred hccchh
Confidence 765443
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=84.51 E-value=0.94 Score=32.75 Aligned_cols=74 Identities=9% Similarity=-0.034 Sum_probs=47.1
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhh-hhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSF-LTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
.++||=+|+ | -|. ++..|+++|.+|++++. ++...+.... ... .+.+++++.+|+.+.+. -+.+|+|+
T Consensus 38 ~~~vLDiGC-G-~G~-~~~~l~~~g~~v~GvD~-S~~ml~~A~~~~~~---~~~~v~~~~~d~~~~~~----~~~fD~i~ 106 (246)
T d1y8ca_ 38 FDDYLDLAC-G-TGN-LTENLCPKFKNTWAVDL-SQEMLSEAENKFRS---QGLKPRLACQDISNLNI----NRKFDLIT 106 (246)
T ss_dssp TTEEEEETC-T-TST-THHHHGGGSSEEEEECS-CHHHHHHHHHHHHH---TTCCCEEECCCGGGCCC----SCCEEEEE
T ss_pred CCeEEEEeC-c-CCH-HHHHHHHhCCccEeecc-chhhhhhccccccc---cCccceeeccchhhhcc----cccccccc
Confidence 468999984 3 233 46677888999999998 5543322221 111 23478999999986542 24589998
Q ss_pred Eeeecc
Q 026091 84 HVAAPI 89 (243)
Q Consensus 84 ~~a~~~ 89 (243)
...+..
T Consensus 107 ~~~~~~ 112 (246)
T d1y8ca_ 107 CCLDST 112 (246)
T ss_dssp ECTTGG
T ss_pred eeeeee
Confidence 654443
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=84.38 E-value=0.52 Score=33.36 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=27.4
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
++|+| +|..|...+..+.+.|.+|.++.++
T Consensus 6 vvVIG-gGpaGl~aA~~aa~~G~kV~vie~~ 35 (221)
T d1dxla1 6 VVIIG-GGPGGYVAAIKAAQLGFKTTCIEKR 35 (221)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCcEEEEEec
Confidence 78999 5999999999999999999999873
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=84.11 E-value=0.3 Score=34.00 Aligned_cols=35 Identities=9% Similarity=0.077 Sum_probs=30.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
+.++|+|+| .|..|...+..|.+.|.+|.++.|..
T Consensus 4 k~~dVvIIG-GGpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILG-SGPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEEC-CSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEEeec
Confidence 456899999 69999999999999999999997733
|
| >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Bacillus subtilis [TaxId: 1423]
Probab=83.76 E-value=1.3 Score=29.75 Aligned_cols=67 Identities=15% Similarity=0.037 Sum_probs=44.4
Q ss_pred CCCeEEEecC--chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 4 EKGRVCVTGG--TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 4 ~~k~ilvtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
++.+|.++|- .+.+...++..+...|.++.+++- ..-... ...+.. ..++.+++++.|+
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P-~~~~~~-----------~~~~~~-------~~~~~ea~~~aDv 62 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGP-SEWQDE-----------ENTFGT-------YVSMDEAVESSDV 62 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCC-chhhcc-----------ccceeE-------EEechhccccCce
Confidence 3679999998 566999999999999999876654 211100 112222 1234577888999
Q ss_pred EEEeeecc
Q 026091 82 VIHVAAPI 89 (243)
Q Consensus 82 vi~~a~~~ 89 (243)
|+-.....
T Consensus 63 iy~~r~q~ 70 (151)
T d2at2a2 63 VMLLRIQN 70 (151)
T ss_pred eeeeEEEE
Confidence 88776553
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=83.74 E-value=1.1 Score=32.06 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=25.0
Q ss_pred CeEEEecCchhhHH-HHHHHHHHc-CCeEEEEEeCCchh
Q 026091 6 GRVCVTGGTGFIGS-WLIMRLLDH-GYSVRTTVRSDPEQ 42 (243)
Q Consensus 6 k~ilvtGatG~iG~-~l~~~L~~~-g~~V~~~~r~~~~~ 42 (243)
-+|.|+| +|.+|. ++++.+... +.+|+++.-++++.
T Consensus 34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~ 71 (221)
T d1h6da1 34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEK 71 (221)
T ss_dssp EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHH
T ss_pred EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHH
Confidence 4899999 799996 566666554 57888665435543
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=83.43 E-value=0.52 Score=36.55 Aligned_cols=29 Identities=28% Similarity=0.219 Sum_probs=26.2
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
++|+| +|.-|.-++.+|++.|.+|.++=+
T Consensus 5 ~IIVG-sG~aG~v~A~rLae~g~~VlvLEa 33 (360)
T d1kdga1 5 YIIVG-AGPGGIIAADRLSEAGKKVLLLER 33 (360)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHhhCCCeEEEEEc
Confidence 67888 799999999999999999999865
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=83.23 E-value=0.7 Score=32.87 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=31.4
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEeCC
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSD 39 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 39 (243)
..|+|+|+| +|.-|-.++..+++.+.+++.+.|+.
T Consensus 31 ~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 31 SGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence 579999999 89999999999999999999998843
|
| >d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Succinate dehydogenase species: Escherichia coli [TaxId: 562]
Probab=83.14 E-value=0.37 Score=36.87 Aligned_cols=30 Identities=17% Similarity=0.245 Sum_probs=27.8
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+|+| +|.-|...+..+.++|.+|+++.+.
T Consensus 10 VlVVG-~G~AGl~AAl~aa~~G~~V~lleK~ 39 (330)
T d1neka2 10 AVVIG-AGGAGMRAALQISQSGQTCALLSKV 39 (330)
T ss_dssp CEEEC-CSHHHHHHHHHHHHTTCCCEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCeEEEEeCC
Confidence 89999 7999999999999999999999873
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=82.46 E-value=0.59 Score=35.51 Aligned_cols=30 Identities=23% Similarity=0.248 Sum_probs=26.4
Q ss_pred EEEecCchhhHHHHHHHHHH-----cCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLD-----HGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~-----~g~~V~~~~r~ 38 (243)
|+|+| .|..|..++..|++ .|++|+++-|+
T Consensus 10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~ 44 (360)
T d1pn0a1 10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKR 44 (360)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCC
Confidence 89999 69999999999974 69999999883
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.38 E-value=0.49 Score=35.91 Aligned_cols=30 Identities=23% Similarity=0.193 Sum_probs=27.9
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (243)
|+|+| +|..|...+.++++.|.+|.++.+.
T Consensus 22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~ 51 (317)
T d1qo8a2 22 VLVVG-AGSAGFNASLAAKKAGANVILVDKA 51 (317)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 89999 7999999999999999999999874
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.15 E-value=3.8 Score=27.32 Aligned_cols=31 Identities=19% Similarity=0.190 Sum_probs=26.8
Q ss_pred CCeEEEecCchhhHHHHHHHHHHcCCeEEEE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDHGYSVRTT 35 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~ 35 (243)
++++.|++.+|+.|--++..+.+.|.++--+
T Consensus 3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l 33 (163)
T d2csua3 3 GNKVAIMTNAGGPGVLTADELDKRGLKLATL 33 (163)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred CCeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence 5789999999999999999999999877544
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.15 E-value=0.74 Score=36.92 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=19.0
Q ss_pred chhhH---HHHHHHHHHcCCeEEEEE
Q 026091 14 TGFIG---SWLIMRLLDHGYSVRTTV 36 (243)
Q Consensus 14 tG~iG---~~l~~~L~~~g~~V~~~~ 36 (243)
+|++| .+|+++|.++||+|.+++
T Consensus 16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~ 41 (477)
T d1rzua_ 16 TGGLADVVGALPIALEAHGVRTRTLI 41 (477)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 36666 668999999999999986
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.06 E-value=1.1 Score=32.00 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=29.6
Q ss_pred CCCeEEEecCchhhHHHHHHHHH--------------------HcC-CeEEEEEeCCc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLL--------------------DHG-YSVRTTVRSDP 40 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~--------------------~~g-~~V~~~~r~~~ 40 (243)
..++|+|+| .|.++.-+++-|+ +.| .+|.++.|+.+
T Consensus 38 ~gk~VvVIG-gGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~ 94 (216)
T d1lqta1 38 SGARAVVIG-NGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 94 (216)
T ss_dssp CSSEEEEEC-CSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred cCceEEEEC-CCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence 368999999 7999999999887 445 57999999655
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.06 E-value=0.82 Score=32.47 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=27.2
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
|+|+| +|..|...+.++++.|.+|.++.+
T Consensus 8 viVIG-~GpAGl~aA~~aa~~G~kV~lie~ 36 (233)
T d1v59a1 8 VVIIG-GGPAGYVAAIKAAQLGFNTACVEK 36 (233)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCcEEEEEe
Confidence 89999 699999999999999999999987
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.92 E-value=1 Score=34.35 Aligned_cols=69 Identities=9% Similarity=0.085 Sum_probs=43.0
Q ss_pred CCeEEEecCchhhHHHHHHHHHHc-C-CeEEEEEeCCchhhchh-hhhhcCCCCCCCeEEEecCCCChhhHHHHhccccE
Q 026091 5 KGRVCVTGGTGFIGSWLIMRLLDH-G-YSVRTTVRSDPEQKRDL-SFLTNLPRASERLQIFNADLNNPESFDAAIAGCTG 81 (243)
Q Consensus 5 ~k~ilvtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 81 (243)
.+++.|+| +|..+.+.++.|... . .+|.+.+| +++..... ..+... .+.... +..+.++++|+
T Consensus 125 ~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r-~~e~~~~~~~~~~~~-----~~~~~~-------~~~~a~~~aDi 190 (320)
T d1omoa_ 125 SSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDV-REKAAKKFVSYCEDR-----GISASV-------QPAEEASRCDV 190 (320)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECS-SHHHHHHHHHHHHHT-----TCCEEE-------CCHHHHTSSSE
T ss_pred ccEEEEec-CcccHHHHHHHHHHHhhhhhcccccC-CHHHHHHHHHHHHhc-----CCcccc-------chhhhhccccE
Confidence 46889998 899999999988764 3 58999999 44333222 222221 122111 12355678999
Q ss_pred EEEeee
Q 026091 82 VIHVAA 87 (243)
Q Consensus 82 vi~~a~ 87 (243)
|+.+..
T Consensus 191 V~taT~ 196 (320)
T d1omoa_ 191 LVTTTP 196 (320)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 986644
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=81.83 E-value=4.6 Score=28.87 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=24.2
Q ss_pred CCCeEEEecCc---hhhHHHHHHHHHHc--CCeEEEEEeCCch
Q 026091 4 EKGRVCVTGGT---GFIGSWLIMRLLDH--GYSVRTTVRSDPE 41 (243)
Q Consensus 4 ~~k~ilvtGat---G~iG~~l~~~L~~~--g~~V~~~~r~~~~ 41 (243)
++.||.|+|.. |+++..-+..+.+. +.+++++.-.+.+
T Consensus 15 k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~ 57 (237)
T d2nvwa1 15 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLK 57 (237)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHH
T ss_pred CCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHH
Confidence 34589999953 35666666666654 4788876543443
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=81.29 E-value=0.99 Score=32.43 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=29.8
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHc--------------------C-CeEEEEEeCCc
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDH--------------------G-YSVRTTVRSDP 40 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~--------------------g-~~V~~~~r~~~ 40 (243)
..|+|+|+| .|.++.-+++.|++. | .+|.++.|+.+
T Consensus 38 ~gk~VvVIG-gGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~ 94 (225)
T d1cjca1 38 SCDTAVILG-QGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 94 (225)
T ss_dssp TSSEEEEES-CSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred cCceEEEEC-CchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence 368999999 799999999998873 5 57999998654
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=81.29 E-value=2.5 Score=31.26 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=44.3
Q ss_pred CeEE-EecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEEE
Q 026091 6 GRVC-VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVIH 84 (243)
Q Consensus 6 k~il-vtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 84 (243)
++++ +.||+|-++..+++ ..+.+|++++. ++........-...-....++.++.+|+.+.- ......+|.||-
T Consensus 112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Di-s~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~--~~~~~~fDlIVs 185 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDV-SSKAVEIARKNAERHGVSDRFFVRKGEFLEPF--KEKFASIEMILS 185 (271)
T ss_dssp CEEEEESCTTSHHHHHHHH---HSSCEEEEEES-CHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--GGGTTTCCEEEE
T ss_pred cEEEEeeeeeehhhhhhhh---cccceeeechh-hhhHHHHHHHHHHHcCCCceeEEeeccccccc--ccccCcccEEEE
Confidence 4455 55555566666542 34689999999 55444333322222223456788889987542 223346899997
Q ss_pred eee
Q 026091 85 VAA 87 (243)
Q Consensus 85 ~a~ 87 (243)
|--
T Consensus 186 NPP 188 (271)
T d1nv8a_ 186 NPP 188 (271)
T ss_dssp CCC
T ss_pred ccc
Confidence 753
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=80.95 E-value=0.51 Score=34.90 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=29.5
Q ss_pred CCCeEEEecCchhhHHHH-----HHHHHHcCCeEEEEEeC
Q 026091 4 EKGRVCVTGGTGFIGSWL-----IMRLLDHGYSVRTTVRS 38 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l-----~~~L~~~g~~V~~~~r~ 38 (243)
...+|+|+.|=|++|+.. +..|+++|++|.+++-+
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 456888888899999984 68888999999999983
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=80.94 E-value=2.1 Score=31.62 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=45.3
Q ss_pred CCCeEEEec-CchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEE
Q 026091 4 EKGRVCVTG-GTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGV 82 (243)
Q Consensus 4 ~~k~ilvtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 82 (243)
++.+||=+| |+|..+..+++.+ ..+++|++++. ++........... ..+.+++++..|+.+.+. -+.+|+|
T Consensus 27 ~~~~ILDiGcG~G~~~~~la~~~-~~~~~v~giD~-s~~~l~~a~~~~~--~~~~~~~f~~~d~~~~~~----~~~fD~v 98 (281)
T d2gh1a1 27 KPVHIVDYGCGYGYLGLVLMPLL-PEGSKYTGIDS-GETLLAEARELFR--LLPYDSEFLEGDATEIEL----NDKYDIA 98 (281)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTS-CTTCEEEEEEC-CHHHHHHHHHHHH--SSSSEEEEEESCTTTCCC----SSCEEEE
T ss_pred CcCEEEEecCcCCHHHHHHHHhC-CCCCEEEEEec-chhHhhhhhcccc--cccccccccccccccccc----cCCceEE
Confidence 456888888 4455554444322 34789999998 5543333322211 113368899999887542 2458988
Q ss_pred EEeeec
Q 026091 83 IHVAAP 88 (243)
Q Consensus 83 i~~a~~ 88 (243)
+.....
T Consensus 99 ~~~~~l 104 (281)
T d2gh1a1 99 ICHAFL 104 (281)
T ss_dssp EEESCG
T ss_pred EEehhh
Confidence 766543
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.88 E-value=0.6 Score=36.58 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=27.0
Q ss_pred EEEecCchhhHHHHHHHHHH------cCCeEEEEEeC
Q 026091 8 VCVTGGTGFIGSWLIMRLLD------HGYSVRTTVRS 38 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~------~g~~V~~~~r~ 38 (243)
|+|+| .|--|+..+..|++ .|++|.++-|.
T Consensus 35 ViIVG-gGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~ 70 (380)
T d2gmha1 35 VVIVG-AGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 70 (380)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred EEEEC-CCHHHHHHHHHHHhhhhhhcCCCEEEEEcCC
Confidence 89999 59999999999987 79999999983
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=80.72 E-value=1.4 Score=28.16 Aligned_cols=34 Identities=29% Similarity=0.364 Sum_probs=30.5
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+..||+|-|-||..|+.-+++.++.|.+|++=+.
T Consensus 6 k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVt 39 (121)
T d1oi7a1 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT 39 (121)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeee
Confidence 4468999999999999999999999999887776
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.61 E-value=1.3 Score=28.84 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.7
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcCCeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHGYSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (243)
+..||+|-|-||..|+.-+++.++.|.+|++-+.
T Consensus 14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVt 47 (130)
T d1euca1 14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTT 47 (130)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeec
Confidence 4568999999999999999999999999887776
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=80.40 E-value=3.7 Score=31.36 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=54.9
Q ss_pred EecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChh-hHHHHhccccEEEEeeec
Q 026091 10 VTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPE-SFDAAIAGCTGVIHVAAP 88 (243)
Q Consensus 10 vtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~vi~~a~~ 88 (243)
+-+|+|.+|..++ +++.+|+++-. .++....+...... ..-.+++++.+|..+.- ........+|+||--
T Consensus 219 LycG~G~fsl~La----~~~~~V~gvE~-~~~ai~~A~~na~~-n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD--- 289 (358)
T d1uwva2 219 LFCGMGNFTLPLA----TQAASVVGVEG-VPALVEKGQQNARL-NGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD--- 289 (358)
T ss_dssp ESCTTTTTHHHHH----TTSSEEEEEES-CHHHHHHHHHHHHH-TTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC---
T ss_pred ecccccccchhcc----ccccEEEeccC-cHHHHHHHHHhHHh-cccccceeeecchhhhhhhhhhhhccCceEEeC---
Confidence 5677999998865 56789999988 44332222221111 12246899999886542 222223457887732
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEEec
Q 026091 89 IDIHGKEPEEVIIQRAVSGTIGILKSCLKSGTVKRVVYTSS 129 (243)
Q Consensus 89 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 129 (243)
+. .... ..+++...+.+ +++|||+|-
T Consensus 290 --PP-R~G~-----------~~~~~~l~~~~-~~~ivYVSC 315 (358)
T d1uwva2 290 --PA-RAGA-----------AGVMQQIIKLE-PIRIVYVSC 315 (358)
T ss_dssp --CC-TTCC-----------HHHHHHHHHHC-CSEEEEEES
T ss_pred --CC-CccH-----------HHHHHHHHHcC-CCEEEEEeC
Confidence 21 1111 12344445556 789999994
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=80.25 E-value=1.9 Score=30.54 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=50.6
Q ss_pred CCeEEEecC-chhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCChhhHHHHhccccEEE
Q 026091 5 KGRVCVTGG-TGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNPESFDAAIAGCTGVI 83 (243)
Q Consensus 5 ~k~ilvtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 83 (243)
..+||=.|+ +|..-+++++.. ..| +|++++. ++.....+..... ....+.++..|..++......++.+|+|+
T Consensus 57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDi-s~~~i~~a~~~a~---~~~ni~~i~~d~~~~~~~~~~~~~vd~v~ 130 (209)
T d1nt2a_ 57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEY-SAKPFEKLLELVR---ERNNIIPLLFDASKPWKYSGIVEKVDLIY 130 (209)
T ss_dssp SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECC-CHHHHHHHHHHHH---HCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeC-CHHHHHHHHHHhh---ccCCceEEEeeccCccccccccceEEEEE
Confidence 467887774 555666666543 444 8999999 6544433333222 12479999999999888777777788887
Q ss_pred Ee
Q 026091 84 HV 85 (243)
Q Consensus 84 ~~ 85 (243)
|.
T Consensus 131 ~~ 132 (209)
T d1nt2a_ 131 QD 132 (209)
T ss_dssp EC
T ss_pred ec
Confidence 65
|
| >d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: RecA protein-like (ATPase-domain) domain: Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU species: Salmonella typhimurium [TaxId: 90371]
Probab=80.20 E-value=6.5 Score=26.91 Aligned_cols=33 Identities=24% Similarity=0.115 Sum_probs=25.2
Q ss_pred EEEecCchhhHHHHHHHHHHcCCeEEEEEeCCc
Q 026091 8 VCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDP 40 (243)
Q Consensus 8 ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (243)
||||||++.==|..++.|+..+.+|+-+....+
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~~~~YiAT~~~ 34 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAPQVLYIATSQI 34 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCSSEEEEECCCC
T ss_pred EEEECCCCccHHHHHHHHHhcCCCcEEEEccCC
Confidence 799999988888999999877666655554343
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.06 E-value=5 Score=30.57 Aligned_cols=74 Identities=24% Similarity=0.068 Sum_probs=45.5
Q ss_pred eEEEecCchhhHHHHHHHHHHcCCeEEEEEeCCchhhchhhhhhcCCCCCCCeEEEecCCCCh---hhHHHHhccccEEE
Q 026091 7 RVCVTGGTGFIGSWLIMRLLDHGYSVRTTVRSDPEQKRDLSFLTNLPRASERLQIFNADLNNP---ESFDAAIAGCTGVI 83 (243)
Q Consensus 7 ~ilvtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~vi 83 (243)
||+=.+ ...-|-...+.|++.|++|+=+-+ .... +...+.. ...+=+-+..|++++ +.+.++++++|+||
T Consensus 8 rVld~~-~~~agp~~~~~lad~GA~VikvE~-p~~~-~~~~~~~----~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i 80 (359)
T d1x74a1 8 RVVELA-GIGPGPHAAMILGDLGADVVRIDR-PSSV-DGISRDA----MLRNRRIVTADLKSDQGLELALKLIAKADVLI 80 (359)
T ss_dssp EEEEEC-CSTHHHHHHHHHHHTTCEEEEEEC-C------CCCCG----GGCSCEEEECCTTSHHHHHHHHHHHTTCSEEE
T ss_pred EEEEcC-CchHHHHHHHHHHHhCCEEEEECC-CCCC-Cchhhhh----hhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEE
Confidence 444444 445566777788889999998765 3211 1111100 112336688899887 56777788999999
Q ss_pred Eeee
Q 026091 84 HVAA 87 (243)
Q Consensus 84 ~~a~ 87 (243)
++--
T Consensus 81 ~n~~ 84 (359)
T d1x74a1 81 EGYR 84 (359)
T ss_dssp ECSC
T ss_pred ecCC
Confidence 8853
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.05 E-value=1.2 Score=30.44 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=25.2
Q ss_pred CCCeEEEecCchhhHHHHHHHHHHcC----CeEEEEEe
Q 026091 4 EKGRVCVTGGTGFIGSWLIMRLLDHG----YSVRTTVR 37 (243)
Q Consensus 4 ~~k~ilvtGatG~iG~~l~~~L~~~g----~~V~~~~r 37 (243)
++-+|+|+| .|.+|+.+++.|.++. .+|.++..
T Consensus 3 k~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~ 39 (168)
T d1ebfa1 3 KVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAE 39 (168)
T ss_dssp SEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred CEEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEE
Confidence 345899998 9999999999998764 24555544
|